
Lag0001365 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTTTGCCGCCCTCCACTTCCGGCTCCGCCTCCGCCTCCGGCCCCGCCCACCGCGGTATCGGTTTGTCCAATACTATTCACTCCGAGGTTGCTCCCTGCTTGCCTTTGCCTTCGCTTCCGGTCTTCTTCGGCTCCTTCGAGCCCGAGCTCCGGCTCTTCGATGAGCCGGCTGGGGACCATGCTACTTTGAGGACTGATGTTCTCTCTCAGTCTAAGAAGATCGCTGATCTGCTTCGTGCTACTGACGTCTCTTACTTGTGAGTTCTTGATTTTTTCTTTTTTTTTTTTTGAACTGAATTCTTGTAATTCGAATTTTGTGATTCTTCAGTCCGGCGCCGGAGACGGAGGAGGGAGGTCCCTCCTCCCTCCCTTTTCTATTTTTTTTTTTAAAAAAATATTGAAGAAAAAAAGTGAAGAAGAAAGAAGGGAAGAAGGAGAAAGAAGGGAAGAAGAAGCAAGGAGAAAGAAGAAAAAAAAAAAAAAAAAAAAAATTCAGTCGCCGGCGGCGGCGGCGGCGGCGTGTGGTGGCCGCCGGTCGCCGGACTTAGGAAGAAGAAGAAGGAGGGAGAAGATGGAGAAGAAGGAAGATGTAGAATAAGGAGATGA ATGACTTTGCCGCCCTCCACTTCCGGCTCCGCCTCCGCCTCCGGCCCCGCCCACCGCGGTATCGGTTTGTCCAATACTATTCACTCCGAGGTTGCTCCCTGCTTGCCTTTGCCTTCGCTTCCGGTCTTCTTCGGCTCCTTCGAGCCCGAGCTCCGGCTCTTCGATGAGCCGGCTGGGGACCATGCTACTTTGAGGACTGATGTTCTCTCTCAGTCTAAGAAGATCGCTGATCTGCTTCGTGCTACTGACGTCTCTTACTTTCCGGCGCCGGAGACGGAGGAGGGAGTCGCCGGCGGCGGCGGCGGCGGCGTGTGGTGGCCGCCGGTCGCCGGACTTAGGAAGAAGAAGAAGGAGGGAGAAGATGGAGAAGAAGGAAGATGTAGAATAAGGAGATGA ATGACTTTGCCGCCCTCCACTTCCGGCTCCGCCTCCGCCTCCGGCCCCGCCCACCGCGGTATCGGTTTGTCCAATACTATTCACTCCGAGGTTGCTCCCTGCTTGCCTTTGCCTTCGCTTCCGGTCTTCTTCGGCTCCTTCGAGCCCGAGCTCCGGCTCTTCGATGAGCCGGCTGGGGACCATGCTACTTTGAGGACTGATGTTCTCTCTCAGTCTAAGAAGATCGCTGATCTGCTTCGTGCTACTGACGTCTCTTACTTTCCGGCGCCGGAGACGGAGGAGGGAGTCGCCGGCGGCGGCGGCGGCGGCGTGTGGTGGCCGCCGGTCGCCGGACTTAGGAAGAAGAAGAAGGAGGGAGAAGATGGAGAAGAAGGAAGATGTAGAATAAGGAGATGA MTLPPSTSGSASASGPAHRGIGLSNTIHSEVAPCLPLPSLPVFFGSFEPELRLFDEPAGDHATLRTDVLSQSKKIADLLRATDVSYFPAPETEEGVAGGGGGGVWWPPVAGLRKKKKEGEDGEEGRCRIRR Homology
BLAST of Lag0001365 vs. NCBI nr
Match: XP_038880409.1 (sister chromatid cohesion protein SCC2 isoform X1 [Benincasa hispida]) HSP 1 Score: 136.7 bits (343), Expect = 1.4e-28 Identity = 70/86 (81.40%), Postives = 76/86 (88.37%), Query Frame = 0
BLAST of Lag0001365 vs. NCBI nr
Match: XP_022998260.1 (sister chromatid cohesion protein SCC2 isoform X1 [Cucurbita maxima]) HSP 1 Score: 136.3 bits (342), Expect = 1.8e-28 Identity = 71/86 (82.56%), Postives = 76/86 (88.37%), Query Frame = 0
BLAST of Lag0001365 vs. NCBI nr
Match: XP_022948643.1 (sister chromatid cohesion protein SCC2 isoform X1 [Cucurbita moschata]) HSP 1 Score: 136.3 bits (342), Expect = 1.8e-28 Identity = 71/86 (82.56%), Postives = 76/86 (88.37%), Query Frame = 0
BLAST of Lag0001365 vs. NCBI nr
Match: KAG6607103.1 (Sister chromatid cohesion protein SCC2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 136.3 bits (342), Expect = 1.8e-28 Identity = 71/86 (82.56%), Postives = 76/86 (88.37%), Query Frame = 0
BLAST of Lag0001365 vs. NCBI nr
Match: XP_022998261.1 (sister chromatid cohesion protein SCC2 isoform X2 [Cucurbita maxima]) HSP 1 Score: 136.3 bits (342), Expect = 1.8e-28 Identity = 71/86 (82.56%), Postives = 76/86 (88.37%), Query Frame = 0
BLAST of Lag0001365 vs. ExPASy Swiss-Prot
Match: A5HEI1 (Sister chromatid cohesion protein SCC2 OS=Arabidopsis thaliana OX=3702 GN=SCC2 PE=1 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 1.3e-16 Identity = 47/86 (54.65%), Postives = 63/86 (73.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|