Lag0001335 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0001335
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Geranylgeranyl pyrophosphate synthase family protein
Location	chr4: 29737599 .. 29739578 (+)
RNA-Seq Expression	Lag0001335
Synteny	Lag0001335

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATTTTCAGTCATGGCGGCTTCCTCTCTCGGTATGCATTTTGGAAGAAAGACTCCAATCCGATGTTCTTCCTCACCTTCCTCTGCGGTTTCTACTCAAGCCAAATCGATTCAATTTGATCTCAAAACGTACTGGAAAAGGTTGATTCTCGAGATCAACCAAAAGCTGGTTGAAGCTGTTCCCGTTCAGTACCCCGAACAGATCTACGAGGCTATGCGTTACTCCGTCTTGGCCGATGGGGCCAAGCGAGCTCCTCCGGTTATGTGCGTCGCCGCCTGCGAGCTCTTCGGCGTCGACCGCCTCGCCGCATTCCCCACCGCCTGTGCCCTCGAAATGGTTTTTTCTCTTCTCTATTTTGCGTTTCGTGATTTAGACTCGCTTGAATTCTCGCCTTCTGTTATTTCTTGGATGTAAACCAAGTTTGACTACAAATTGCCCAATTCGAATATTTACTTGCGGTTTTCTGTATTGGGTCTCTCAATCTCCTCTAATTGTGAAGTTACTCAACATAGTTGTTCAATTCAATCTCTAGCTATAAATTATACTTGTATGTATGAACGGCCAAGTTGGCTCAAGAATTAGGCAGGAAAAGCAAGAAGGGTTGAAATATTATTCAATTCCCGCTATCTTTTACATTATAGATTCCGGTTCTCAGAGTCAGAGATTCGATACGCTTCAAATTGTGAGTTGATTTCTTTTGTCATGTCCAGGATTAGTAGAATGTGGAAAGTGCACTTGCTTGCTAGGCTGTAATTTCGTAAGGGTCGGATGAATAAATGTGAGAGAGCCCTTAAAATGACTTTTGGGGGTACAGAGGCTGAAAGAAGACGTGGTGTTGAGTATTTCTTGTGTTCTATAGTCATTTCTAGCTGTGCTTTACTTGGTTATATTCGCTCTTATCTGATATCTATACTTGTTTGTACTTCTCTTTACCTCTGTTTGAGTATGTAATAAATGGCCTTCCTCAACTAGTCCTTGCGCCTAGCACAACTGTTTCGTTGTATGTTATGTCTGTCTCTTTATTTCTTTCTCCCAGCTTTTACAAGTCCATTATGTTAAGAAGTGATATAGAGATCCAAGTTATGGTGTCTCTATCCAAATGGAAAACTAAGGGTTAGAGGCAATCTGGGATCTGACGCTCAAGAGTAAAACTATTCACTTTTAGCCTTTGTTCATAGTTTTTAGCCTTTAAGAATTGAGACGGCTTATTGATTCTTTGTGATATGAAAGTCCATGTGATAACATCTACTAGGTTATTTTTAATAGCTATTATTGACACATTTCAAACTAACATGAGTCTTTTGACAGGTTCATGCAGCTTCATTGATCCATGATGATCTTCCTTGTATGGATGATGACCCCTCACGGCGTGGTCAACCTTCAAACCATACAGTTTATGGTGTCGACATGGCTATCCTTGCAGGTGATGCACTTTTCCCCCTGGGCTTCCAACACATTGTCTCACACACACCCTCTGATCTAGTTCCTGAGTCCCGCCTGCTCCGTGTGGTTGCCGAGATTGCCCGAGCTGTTGGTTCCAGAGGCATGGCAGCTGGACAGTTTCTTGACCTTGAGGGAGGCCCCAACTCCGTTGAATTCGTCCAAGAAAAGAAATTTGGCGAAATGGGCCAGTGCTCTGCAGTGTGCGGAGGACTTCTAGCTGGAGCAGAAGACCATGAGGTACAGAGATTGAGAAGGTACGGAAGAGCGGTCGGTGTATTATATCAGGTAGTTGATGACATTTTGGAAGAACAGGCAAAACCACTCGATGAAACAGATGAGAGTAAGAGGAAAAAAGGGAAGAGCTATGTTGGAGTATATGGGATTGAGAAGGCCAAGGAGGTGGCAGAGGAGCTGAGGACCAAAGCTAAGAAGGAATTGGATGGATTTGACAAGTATGGAGACCGAGTGATGCCTTTGTACAGCTTTGTGGACTATGCTGCTGATAGGAGCTTTACTTTTGAAAGTTCAAGTTGA

mRNA sequence

ATGGCATTTTCAGTCATGGCGGCTTCCTCTCTCGGTATGCATTTTGGAAGAAAGACTCCAATCCGATGTTCTTCCTCACCTTCCTCTGCGGTTTCTACTCAAGCCAAATCGATTCAATTTGATCTCAAAACGTACTGGAAAAGGTTGATTCTCGAGATCAACCAAAAGCTGGTTGAAGCTGTTCCCGTTCAGTACCCCGAACAGATCTACGAGGCTATGCGTTACTCCGTCTTGGCCGATGGGGCCAAGCGAGCTCCTCCGGTTATGTGCGTCGCCGCCTGCGAGCTCTTCGGCGTCGACCGCCTCGCCGCATTCCCCACCGCCTGTGCCCTCGAAATGGTTCATGCAGCTTCATTGATCCATGATGATCTTCCTTGTATGGATGATGACCCCTCACGGCGTGGTCAACCTTCAAACCATACAGTTTATGGTGTCGACATGGCTATCCTTGCAGGTGATGCACTTTTCCCCCTGGGCTTCCAACACATTGTCTCACACACACCCTCTGATCTAGTTCCTGAGTCCCGCCTGCTCCGTGTGGTTGCCGAGATTGCCCGAGCTGTTGGTTCCAGAGGCATGGCAGCTGGACAGTTTCTTGACCTTGAGGGAGGCCCCAACTCCGTTGAATTCGTCCAAGAAAAGAAATTTGGCGAAATGGGCCAGTGCTCTGCAGTGTGCGGAGGACTTCTAGCTGGAGCAGAAGACCATGAGGTACAGAGATTGAGAAGGTACGGAAGAGCGGTCGGTGTATTATATCAGGTAGTTGATGACATTTTGGAAGAACAGGCAAAACCACTCGATGAAACAGATGAGAGTAAGAGGAAAAAAGGGAAGAGCTATGTTGGAGTATATGGGATTGAGAAGGCCAAGGAGGTGGCAGAGGAGCTGAGGACCAAAGCTAAGAAGGAATTGGATGGATTTGACAAGTATGGAGACCGAGTGATGCCTTTGTACAGCTTTGTGGACTATGCTGCTGATAGGAGCTTTACTTTTGAAAGTTCAAGTTGA

Coding sequence (CDS)

ATGGCATTTTCAGTCATGGCGGCTTCCTCTCTCGGTATGCATTTTGGAAGAAAGACTCCAATCCGATGTTCTTCCTCACCTTCCTCTGCGGTTTCTACTCAAGCCAAATCGATTCAATTTGATCTCAAAACGTACTGGAAAAGGTTGATTCTCGAGATCAACCAAAAGCTGGTTGAAGCTGTTCCCGTTCAGTACCCCGAACAGATCTACGAGGCTATGCGTTACTCCGTCTTGGCCGATGGGGCCAAGCGAGCTCCTCCGGTTATGTGCGTCGCCGCCTGCGAGCTCTTCGGCGTCGACCGCCTCGCCGCATTCCCCACCGCCTGTGCCCTCGAAATGGTTCATGCAGCTTCATTGATCCATGATGATCTTCCTTGTATGGATGATGACCCCTCACGGCGTGGTCAACCTTCAAACCATACAGTTTATGGTGTCGACATGGCTATCCTTGCAGGTGATGCACTTTTCCCCCTGGGCTTCCAACACATTGTCTCACACACACCCTCTGATCTAGTTCCTGAGTCCCGCCTGCTCCGTGTGGTTGCCGAGATTGCCCGAGCTGTTGGTTCCAGAGGCATGGCAGCTGGACAGTTTCTTGACCTTGAGGGAGGCCCCAACTCCGTTGAATTCGTCCAAGAAAAGAAATTTGGCGAAATGGGCCAGTGCTCTGCAGTGTGCGGAGGACTTCTAGCTGGAGCAGAAGACCATGAGGTACAGAGATTGAGAAGGTACGGAAGAGCGGTCGGTGTATTATATCAGGTAGTTGATGACATTTTGGAAGAACAGGCAAAACCACTCGATGAAACAGATGAGAGTAAGAGGAAAAAAGGGAAGAGCTATGTTGGAGTATATGGGATTGAGAAGGCCAAGGAGGTGGCAGAGGAGCTGAGGACCAAAGCTAAGAAGGAATTGGATGGATTTGACAAGTATGGAGACCGAGTGATGCCTTTGTACAGCTTTGTGGACTATGCTGCTGATAGGAGCTTTACTTTTGAAAGTTCAAGTTGA

Protein sequence

MAFSVMAASSLGMHFGRKTPIRCSSSPSSAVSTQAKSIQFDLKTYWKRLILEINQKLVEAVPVQYPEQIYEAMRYSVLADGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPSDLVPESRLLRVVAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGEMGQCSAVCGGLLAGAEDHEVQRLRRYGRAVGVLYQVVDDILEEQAKPLDETDESKRKKGKSYVGVYGIEKAKEVAEELRTKAKKELDGFDKYGDRVMPLYSFVDYAADRSFTFESSS

Homology

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BLAST of Lag0001335 vs. NCBI nr
Match: XP_038888577.1 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 622.9 bits (1605), Expect = 1.7e-174
Identity = 311/335 (92.84%), Postives = 326/335 (97.31%), Query Frame = 0


Query: 1   MAFSVMAASSLGMHFGRKTPIRCSSSPSSAVSTQAKSIQFDLKTYWKRLILEINQKLVEA 60
           MAFS+MAASSL MHFGRKTPIRCSSS SSAVS+QAKS+QFDLKTYWK+LILEINQKL EA
Sbjct: 1   MAFSLMAASSLSMHFGRKTPIRCSSSSSSAVSSQAKSLQFDLKTYWKQLILEINQKLDEA 60

Query: 61  VPVQYPEQIYEAMRYSVLADGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHAASLI 120
           VP+QYP+QIYEAMRYSVLA GAKRAPPVMCVAACELFGVDRLAAFPTACALEMVH ASLI
Sbjct: 61  VPIQYPDQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLI 120

Query: 121 HDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPSDLVPESRLLRV 180
           HDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTP DLVPESRLLRV
Sbjct: 121 HDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRV 180

Query: 181 VAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGEMGQCSAVCGGLLAGAEDHEVQR 240
           VAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGEM QCSAVCGGLLAGAEDHE+QR
Sbjct: 181 VAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGEMAQCSAVCGGLLAGAEDHEIQR 240

Query: 241 LRRYGRAVGVLYQVVDDILEEQAKPLDETDESKRKKGKSYVGVYGIEKAKEVAEELRTKA 300
           LRRYGR+VGVLYQVVDDILEEQ+K  DETDESKR+KGKSYVGVYGIEKAKEVAEELRTKA
Sbjct: 241 LRRYGRSVGVLYQVVDDILEEQSKKPDETDESKRRKGKSYVGVYGIEKAKEVAEELRTKA 300

Query: 301 KKELDGFDKYGDRVMPLYSFVDYAADRSFTFESSS 336
           KKEL+GF+KYGD+VMPLYSFVDYAADRSF+FE+SS
Sbjct: 301 KKELEGFEKYGDQVMPLYSFVDYAADRSFSFETSS 335

[Close]

BLAST of Lag0001335 vs. NCBI nr
Match: TYK23377.1 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit [Cucumis melo var. makuwa])

HSP 1 Score: 608.6 bits (1568), Expect = 3.2e-170
Identity = 306/335 (91.34%), Postives = 320/335 (95.52%), Query Frame = 0


Query: 1   MAFSVMAASSLGMHFGRKTPIRCSSSPSSAVSTQAKSIQFDLKTYWKRLILEINQKLVEA 60
           MAFS+MAASSL   FGRKTPIRCSSS SSA+S+Q KS+ FDLKTYWK+LILEINQKL EA
Sbjct: 1   MAFSLMAASSLSTSFGRKTPIRCSSSSSSALSSQTKSLHFDLKTYWKQLILEINQKLDEA 60

Query: 61  VPVQYPEQIYEAMRYSVLADGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHAASLI 120
           V +QYPEQIYEAMRYSVLA GAKRAPPVMCVAACELFGVDRLAAFPTACALEMVH ASLI
Sbjct: 61  VLIQYPEQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLI 120

Query: 121 HDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPSDLVPESRLLRV 180
           HDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTP DLVPESRLLRV
Sbjct: 121 HDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRV 180

Query: 181 VAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGEMGQCSAVCGGLLAGAEDHEVQR 240
           VAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGEM QCSAVCGGLLAGAEDHE+QR
Sbjct: 181 VAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGEMAQCSAVCGGLLAGAEDHEIQR 240

Query: 241 LRRYGRAVGVLYQVVDDILEEQAKPLDETDESKRKKGKSYVGVYGIEKAKEVAEELRTKA 300
           LRRYGRAVGVLYQVVDDILEEQ+K L+ET ESKR+KGKSYVGVYGIEKAKEVAEELRTKA
Sbjct: 241 LRRYGRAVGVLYQVVDDILEEQSKKLNETTESKRRKGKSYVGVYGIEKAKEVAEELRTKA 300

Query: 301 KKELDGFDKYGDRVMPLYSFVDYAADRSFTFESSS 336
           K EL+GF+KYGDRVMPLYSFVDYAADRSF+FE+SS
Sbjct: 301 KNELEGFEKYGDRVMPLYSFVDYAADRSFSFETSS 335

[Close]

BLAST of Lag0001335 vs. NCBI nr
Match: XP_022136229.1 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Momordica charantia] >XP_022136230.1 heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Momordica charantia] >XP_022136231.1 heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Momordica charantia])

HSP 1 Score: 608.6 bits (1568), Expect = 3.2e-170
Identity = 304/335 (90.75%), Postives = 319/335 (95.22%), Query Frame = 0


Query: 1   MAFSVMAASSLGMHFGRKTPIRCSSSPSSAVSTQAKSIQFDLKTYWKRLILEINQKLVEA 60
           MAFS+MAASS+ +HFGR  PIRCSSS  SAV T+AKS+QFDLKTYWK+LI E NQKL EA
Sbjct: 1   MAFSIMAASSIRVHFGRTAPIRCSSSSPSAVLTRAKSLQFDLKTYWKKLIFETNQKLDEA 60

Query: 61  VPVQYPEQIYEAMRYSVLADGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHAASLI 120
           + VQYP++IYEAMRYSVLA+GAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHAASLI
Sbjct: 61  ILVQYPDEIYEAMRYSVLAEGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHAASLI 120

Query: 121 HDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPSDLVPESRLLRV 180
           HDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPSDLVPESRLLRV
Sbjct: 121 HDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPSDLVPESRLLRV 180

Query: 181 VAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGEMGQCSAVCGGLLAGAEDHEVQR 240
           VAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGEMGQCSAVCGGLLAGAEDHEVQR
Sbjct: 181 VAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGEMGQCSAVCGGLLAGAEDHEVQR 240

Query: 241 LRRYGRAVGVLYQVVDDILEEQAKPLDETDESKRKKGKSYVGVYGIEKAKEVAEELRTKA 300
           LRRYGRAVGVLYQVVDDILEEQ K LD TDES+R+KGKSYVGVYGIEKAKEVAEELR KA
Sbjct: 241 LRRYGRAVGVLYQVVDDILEEQTKQLDATDESRRRKGKSYVGVYGIEKAKEVAEELRNKA 300

Query: 301 KKELDGFDKYGDRVMPLYSFVDYAADRSFTFESSS 336
           KKELDGF+KYGDRV+PLYSFVDYAADR F+ ESSS
Sbjct: 301 KKELDGFEKYGDRVVPLYSFVDYAADRGFSIESSS 335

[Close]

BLAST of Lag0001335 vs. NCBI nr
Match: XP_023529740.1 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 608.2 bits (1567), Expect = 4.2e-170
Identity = 307/337 (91.10%), Postives = 324/337 (96.14%), Query Frame = 0


Query: 1   MAFSVMAASSLGMHFGRKTPIRC--SSSPSSAVSTQAKSIQFDLKTYWKRLILEINQKLV 60
           MAFS+MAASSL M+FG K  IRC  SSS SSAVS+QAKSIQFDLKTYWK+LILEINQKL 
Sbjct: 32  MAFSIMAASSLRMNFGTKASIRCSSSSSSSSAVSSQAKSIQFDLKTYWKKLILEINQKLD 91

Query: 61  EAVPVQYPEQIYEAMRYSVLADGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHAAS 120
           EAVP+QYP+QIYEAMRYSVLA+GAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHAAS
Sbjct: 92  EAVPIQYPDQIYEAMRYSVLANGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHAAS 151

Query: 121 LIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPSDLVPESRLL 180
           LIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTP DLVPESRLL
Sbjct: 152 LIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLL 211

Query: 181 RVVAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGEMGQCSAVCGGLLAGAEDHEV 240
           RVVAEIA+AVGSRGMAAGQFLDLEGGPNS+EFVQEKKFGEM QCSAVCGGLLAGAEDHEV
Sbjct: 212 RVVAEIAKAVGSRGMAAGQFLDLEGGPNSIEFVQEKKFGEMSQCSAVCGGLLAGAEDHEV 271

Query: 241 QRLRRYGRAVGVLYQVVDDILEEQAKPLDETDESKRKKGKSYVGVYGIEKAKEVAEELRT 300
           QRLRRYGRAVGVLYQVVDDI +EQAK LD+TDESK++KGKSYVGVYGIEKAKEVAEELRT
Sbjct: 272 QRLRRYGRAVGVLYQVVDDIRKEQAKKLDQTDESKKRKGKSYVGVYGIEKAKEVAEELRT 331

Query: 301 KAKKELDGFDKYGDRVMPLYSFVDYAADRSFTFESSS 336
           KAKKEL+GF+KYGDRVMPLYSFVDYAADRSF+ ESS+
Sbjct: 332 KAKKELEGFEKYGDRVMPLYSFVDYAADRSFSLESST 368

[Close]

BLAST of Lag0001335 vs. NCBI nr
Match: XP_022928137.1 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic [Cucurbita moschata])

HSP 1 Score: 607.4 bits (1565), Expect = 7.2e-170
Identity = 307/339 (90.56%), Postives = 324/339 (95.58%), Query Frame = 0


Query: 1   MAFSVMAASSLGMHFGRKTPIRC----SSSPSSAVSTQAKSIQFDLKTYWKRLILEINQK 60
           MAFS+MAASSL M+FG K  IRC    SSS SSAVS+QAKSIQFDLKTYWK+LILEINQK
Sbjct: 32  MAFSIMAASSLRMNFGTKASIRCSSSSSSSSSSAVSSQAKSIQFDLKTYWKKLILEINQK 91

Query: 61  LVEAVPVQYPEQIYEAMRYSVLADGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHA 120
           L EAVP+QYP+QIYEAMRYSVLA+GAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHA
Sbjct: 92  LDEAVPIQYPDQIYEAMRYSVLANGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHA 151

Query: 121 ASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPSDLVPESR 180
           ASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTP DLVPESR
Sbjct: 152 ASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESR 211

Query: 181 LLRVVAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGEMGQCSAVCGGLLAGAEDH 240
           LLRVVAEIA+AVGSRGMAAGQFLDLEGGPNS+EFVQEKKFGEM QCSAVCGGLLAGAEDH
Sbjct: 212 LLRVVAEIAKAVGSRGMAAGQFLDLEGGPNSIEFVQEKKFGEMSQCSAVCGGLLAGAEDH 271

Query: 241 EVQRLRRYGRAVGVLYQVVDDILEEQAKPLDETDESKRKKGKSYVGVYGIEKAKEVAEEL 300
           EVQRLRRYGRAVGVLYQVVDDI +EQAK LD+TDESK++KGKSYVGVYGIEKAKEVAEEL
Sbjct: 272 EVQRLRRYGRAVGVLYQVVDDIRKEQAKKLDQTDESKKRKGKSYVGVYGIEKAKEVAEEL 331

Query: 301 RTKAKKELDGFDKYGDRVMPLYSFVDYAADRSFTFESSS 336
           RTKAKKEL+GF+KYGDRVMPLYSFVDYAADRSF+ ESS+
Sbjct: 332 RTKAKKELEGFEKYGDRVMPLYSFVDYAADRSFSLESST 370

[Close]

BLAST of Lag0001335 vs. ExPASy Swiss-Prot
Match: Q39108 (Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GGR PE=1 SV=2)

HSP 1 Score: 411.8 bits (1057), Expect = 7.6e-114
Identity = 221/315 (70.16%), Postives = 245/315 (77.78%), Query Frame = 0


Query: 19  TPIRCSSSPSSAVSTQAKSIQFDLKTYWKRLILEINQKLVEAVPVQYPEQIYEAMRYSVL 78
           +P    SS SSA      S+ FDL+TYW  LI EINQKL EA+PV++P  IYEAMRYSVL
Sbjct: 28  SPAAIRSSSSSAPG----SLNFDLRTYWTTLITEINQKLDEAIPVKHPAGIYEAMRYSVL 87

Query: 79  ADGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPS 138
           A GAKRAPPVMCVAACELFG DRLAAFPTACALEMVHAASLIHDDLPCMDDDP RRG+PS
Sbjct: 88  AQGAKRAPPVMCVAACELFGGDRLAAFPTACALEMVHAASLIHDDLPCMDDDPVRRGKPS 147

Query: 139 NHTVYGVDMAILAGDALFPLGFQHIVSHTPSDLVPESRLLRVVAEIARAVGSRGMAAGQF 198
           NHTVYG  MAILAGDALFPL FQHIVSHTP DLVP + +LR++ EIAR VGS GMAAGQ+
Sbjct: 148 NHTVYGSGMAILAGDALFPLAFQHIVSHTPPDLVPRATILRLITEIARTVGSTGMAAGQY 207

Query: 199 LDLEGGPNSVEFVQEKKFGEMGQCSAVCGGLLAGAEDHEVQRLRRYGRAVGVLYQVVDDI 258
           +DLEGGP  + FVQEKKFG MG+CSAVCGGLL GA + E+Q LRRYGRAVG+LYQVVDDI
Sbjct: 208 VDLEGGPFPLSFVQEKKFGAMGECSAVCGGLLGGATEDELQSLRRYGRAVGMLYQVVDDI 267

Query: 259 LEEQAKPLDETDESKRKKGKSYVGVYGIEKA-KEVAEELRTKAKKELDGFD-KY--GDRV 318
            E+              K KSY G  G EK   E+AEEL+ KAKKEL  FD KY  GD +
Sbjct: 268 TED--------------KKKSYDG--GAEKGMMEMAEELKEKAKKELQVFDNKYGGGDTL 322

Query: 319 MPLYSFVDYAADRSF 330
           +PLY+FVDYAA R F
Sbjct: 328 VPLYTFVDYAAHRHF 322

[Close]

BLAST of Lag0001335 vs. ExPASy Swiss-Prot
Match: Q43133 (Geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic OS=Sinapis alba OX=3728 GN=GGPS1 PE=1 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 2.0e-66
Identity = 145/327 (44.34%), Postives = 213/327 (65.14%), Query Frame = 0


Query: 19  TPIR-CSSSPSSAVST------QAKSIQFDLKTYWKRLILEINQKLVEAVPVQYPEQIYE 78
           TP R  SSS SS++ T      ++ S  FD  +Y  R    +N+ L  AVP++ P +I+E
Sbjct: 42  TPKRTVSSSSSSSLITKEDNNLKSSSSSFDFMSYIIRKADSVNKALDSAVPLREPLKIHE 101

Query: 79  AMRYSVLADGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHAASLIHDDLPCMDDDP 138
           AMRYS+LA G KR  PV+C+AACEL G +   A P  CA+EM+H  SLIHDDLPCMD+D 
Sbjct: 102 AMRYSLLA-GGKRVRPVLCIAACELVGGEESLAMPARCAVEMIHTMSLIHDDLPCMDNDD 161

Query: 139 SRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPSDLVPESRLLRVVAEIARAVGSR 198
            RRG+P+NH VYG D+A+LAGDAL    F+H+ S T S++ P +R++R V E+A+A+G+ 
Sbjct: 162 LRRGKPTNHKVYGEDVAVLAGDALLSFAFEHLASATSSEVSP-ARVVRAVGELAKAIGTE 221

Query: 199 GMAAGQFLDL--EG------GPNSVEFVQEKKFGEMGQCSAVCGGLLAGAEDHEVQRLRR 258
           G+ AGQ +D+  EG      G   ++F+   K   + + SAV GG++ G  D E++RLR+
Sbjct: 222 GLVAGQVVDISSEGLDLNNVGLEHLKFIHLHKTAALLEASAVLGGIIGGGSDEEIERLRK 281

Query: 259 YGRAVGVLYQVVDDILE--EQAKPLDETDESKRKKGK-SYVGVYGIEKAKEVAEELRTKA 318
           + R +G+L+QVVDDIL+  + ++ L +T        K +Y  + G+EK++E AE+L T+A
Sbjct: 282 FARCIGLLFQVVDDILDVTKSSQELGKTAGKDLIADKLTYPKLMGLEKSREFAEKLNTEA 341

Query: 319 KKELDGFDKYGDRVMPLYSFVDYAADR 328
           + +L GFD   D+V PL +  +Y A+R
Sbjct: 342 RDQLLGFD--SDKVAPLLALANYIANR 364

[Close]

BLAST of Lag0001335 vs. ExPASy Swiss-Prot
Match: P34802 (Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GGPPS1 PE=1 SV=2)

HSP 1 Score: 252.3 bits (643), Expect = 7.7e-66
Identity = 143/328 (43.60%), Postives = 208/328 (63.41%), Query Frame = 0


Query: 17  RKTPIRCSSSPSSAVST------QAKSIQFDLKTYWKRLILEINQKLVEAVPVQYPEQIY 76
           ++T    SS  SS+V T      Q++   FD  +Y       +N+ L  AVP++ P +I+
Sbjct: 45  KRTVSSSSSIVSSSVVTKEDNLRQSEPSSFDFMSYIITKAELVNKALDSAVPLREPLKIH 104

Query: 77  EAMRYSVLADGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHAASLIHDDLPCMDDD 136
           EAMRYS+LA G KR  PV+C+AACEL G +   A P ACA+EM+H  SLIHDDLPCMD+D
Sbjct: 105 EAMRYSLLA-GGKRVRPVLCIAACELVGGEESTAMPAACAVEMIHTMSLIHDDLPCMDND 164

Query: 137 PSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPSDLVPESRLLRVVAEIARAVGS 196
             RRG+P+NH V+G D+A+LAGDAL    F+H+ S T SD+V   R++R V E+A+A+G+
Sbjct: 165 DLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHLASATSSDVVSPVRVVRAVGELAKAIGT 224

Query: 197 RGMAAGQFLDL--EG------GPNSVEFVQEKKFGEMGQCSAVCGGLLAGAEDHEVQRLR 256
            G+ AGQ +D+  EG      G   +EF+   K   + + SAV G ++ G  D E++RLR
Sbjct: 225 EGLVAGQVVDISSEGLDLNDVGLEHLEFIHLHKTAALLEASAVLGAIVGGGSDDEIERLR 284

Query: 257 RYGRAVGVLYQVVDDILE--EQAKPLDETDESKRKKGK-SYVGVYGIEKAKEVAEELRTK 316
           ++ R +G+L+QVVDDIL+  + +K L +T        K +Y  + G+EK++E AE+L  +
Sbjct: 285 KFARCIGLLFQVVDDILDVTKSSKELGKTAGKDLIADKLTYPKIMGLEKSREFAEKLNRE 344

Query: 317 AKKELDGFDKYGDRVMPLYSFVDYAADR 328
           A+ +L GFD   D+V PL +  +Y A R
Sbjct: 345 ARDQLLGFD--SDKVAPLLALANYIAYR 369

[Close]

BLAST of Lag0001335 vs. ExPASy Swiss-Prot
Match: Q94ID7 (Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Hevea brasiliensis OX=3981 GN=GGPS PE=1 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 8.0e-63
Identity = 138/336 (41.07%), Postives = 210/336 (62.50%), Query Frame = 0


Query: 10  SLGMHFGRKTPIRCSSSPSSAVSTQAKSIQ---------FDLKTYWKRLILEINQKLVEA 69
           SL + F  +   R  SS S+ ++ + +++Q         FD K+Y  +    INQ L  A
Sbjct: 38  SLAISFAYRKSERPISSVSAIITKEEETLQEEQNNPPPSFDFKSYMLQKGNSINQALEAA 97

Query: 70  VPVQYPEQIYEAMRYSVLADGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHAASLI 129
           +P+Q P +I+E+MRYS+LA G KR  P +C+AACEL G +   A P ACA+EM+H  SLI
Sbjct: 98  IPLQEPAKIHESMRYSLLA-GGKRVRPALCLAACELVGGNDSMAMPAACAVEMIHTMSLI 157

Query: 130 HDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPSDLVPESRLLRV 189
           HDDLPCMD+D  RRG+P+NH V+G D+A+LAGDAL    F+HI   T +  V  +R++R 
Sbjct: 158 HDDLPCMDNDDLRRGKPTNHIVFGEDVAVLAGDALLAFAFEHIAVSTLN--VSSARIVRA 217

Query: 190 VAEIARAVGSRGMAAGQFLDLEGGPNS------VEFVQEKKFGEMGQCSAVCGGLLAGAE 249
           V E+A+A+G+ G+ AGQ +D+    +S      +EF+   K  ++ + + V G +L G  
Sbjct: 218 VGELAKAIGAEGLVAGQVVDINSEGSSEVDLEKLEFIHIHKTAKLLEGAVVLGAILGGGT 277

Query: 250 DHEVQRLRRYGRAVGVLYQVVDDILE--EQAKPLDETDESKRKKGK-SYVGVYGIEKAKE 309
           D EV++LR+Y R +G+L+QVVDDIL+  + ++ L +T        K +Y  + GIEK++E
Sbjct: 278 DEEVEKLRKYARDIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSRE 337

Query: 310 VAEELRTKAKKELDGFDKYGDRVMPLYSFVDYAADR 328
            AE+L  +A+++L GFD   ++  PL +  +Y A R
Sbjct: 338 FAEKLNKEAQEQLAGFDP--EKAAPLIALANYIAHR 368

[Close]

BLAST of Lag0001335 vs. ExPASy Swiss-Prot
Match: Q9LIA0 (Geranylgeranyl pyrophosphate synthase 11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g29430 PE=2 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 2.3e-62
Identity = 131/299 (43.81%), Postives = 190/299 (63.55%), Query Frame = 0


Query: 40  FDLKTYWKRLILEINQKLVEAVPVQYPEQIYEAMRYSVLADGAKRAPPVMCVAACELFGV 99
           FD K+Y  R    ++  L  +VP+Q P  I EA+RYS+LA G KR  P++C+AACEL G 
Sbjct: 61  FDFKSYMIRKAESVSAALNVSVPLQEPLTIQEAVRYSLLA-GGKRVRPLLCIAACELVGG 120

Query: 100 DRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLG 159
           D   A   ACA+EM+H +SLIHDDLPCMDD   RRG+P+NH  +G DMA+LAGDAL  L 
Sbjct: 121 DEATAMSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKEFGEDMAVLAGDALLALA 180

Query: 160 FQHIVSHTPSDLVPESRLLRVVAEIARAVGSRGMAAGQFLDL--------EGGPNSVEFV 219
           F+H ++   + LV   R++R V E+A+A+G++G+ AGQ  DL        + G   +EF+
Sbjct: 181 FEH-MTFVSNGLVAPERMIRAVMELAKAIGTKGLVAGQVTDLCSQGLNPDDVGLERLEFI 240

Query: 220 QEKKFGEMGQCSAVCGGLLAGAEDHEVQRLRRYGRAVGVLYQVVDDILE--EQAKPLDET 279
              K   + + +AV G ++ G  + E+++LR+Y R +G+L+QVVDDIL+  E  K L +T
Sbjct: 241 HLHKTAALLEAAAVLGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTESTKELGKT 300

Query: 280 DESKRKKGK-SYVGVYGIEKAKEVAEELRTKAKKELDGFDKYGDRVMPLYSFVDYAADR 328
                  GK +Y  + G+E+++EVAE+LR +A ++L GFD   D+  PL +   Y A R
Sbjct: 301 AGKDVMAGKLTYPRLIGLERSREVAEKLRREAAEQLLGFD--SDKAAPLVALASYIACR 355

[Close]

BLAST of Lag0001335 vs. ExPASy TrEMBL
Match: A0A6J1C3B2 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111007977 PE=3 SV=1)

HSP 1 Score: 608.6 bits (1568), Expect = 1.6e-170
Identity = 304/335 (90.75%), Postives = 319/335 (95.22%), Query Frame = 0


Query: 1   MAFSVMAASSLGMHFGRKTPIRCSSSPSSAVSTQAKSIQFDLKTYWKRLILEINQKLVEA 60
           MAFS+MAASS+ +HFGR  PIRCSSS  SAV T+AKS+QFDLKTYWK+LI E NQKL EA
Sbjct: 1   MAFSIMAASSIRVHFGRTAPIRCSSSSPSAVLTRAKSLQFDLKTYWKKLIFETNQKLDEA 60

Query: 61  VPVQYPEQIYEAMRYSVLADGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHAASLI 120
           + VQYP++IYEAMRYSVLA+GAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHAASLI
Sbjct: 61  ILVQYPDEIYEAMRYSVLAEGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHAASLI 120

Query: 121 HDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPSDLVPESRLLRV 180
           HDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPSDLVPESRLLRV
Sbjct: 121 HDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPSDLVPESRLLRV 180

Query: 181 VAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGEMGQCSAVCGGLLAGAEDHEVQR 240
           VAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGEMGQCSAVCGGLLAGAEDHEVQR
Sbjct: 181 VAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGEMGQCSAVCGGLLAGAEDHEVQR 240

Query: 241 LRRYGRAVGVLYQVVDDILEEQAKPLDETDESKRKKGKSYVGVYGIEKAKEVAEELRTKA 300
           LRRYGRAVGVLYQVVDDILEEQ K LD TDES+R+KGKSYVGVYGIEKAKEVAEELR KA
Sbjct: 241 LRRYGRAVGVLYQVVDDILEEQTKQLDATDESRRRKGKSYVGVYGIEKAKEVAEELRNKA 300

Query: 301 KKELDGFDKYGDRVMPLYSFVDYAADRSFTFESSS 336
           KKELDGF+KYGDRV+PLYSFVDYAADR F+ ESSS
Sbjct: 301 KKELDGFEKYGDRVVPLYSFVDYAADRGFSIESSS 335

[Close]

BLAST of Lag0001335 vs. ExPASy TrEMBL
Match: A0A5D3DIC5 (Heterodimeric geranylgeranyl pyrophosphate synthase small subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G004430 PE=3 SV=1)

HSP 1 Score: 608.6 bits (1568), Expect = 1.6e-170
Identity = 306/335 (91.34%), Postives = 320/335 (95.52%), Query Frame = 0


Query: 1   MAFSVMAASSLGMHFGRKTPIRCSSSPSSAVSTQAKSIQFDLKTYWKRLILEINQKLVEA 60
           MAFS+MAASSL   FGRKTPIRCSSS SSA+S+Q KS+ FDLKTYWK+LILEINQKL EA
Sbjct: 1   MAFSLMAASSLSTSFGRKTPIRCSSSSSSALSSQTKSLHFDLKTYWKQLILEINQKLDEA 60

Query: 61  VPVQYPEQIYEAMRYSVLADGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHAASLI 120
           V +QYPEQIYEAMRYSVLA GAKRAPPVMCVAACELFGVDRLAAFPTACALEMVH ASLI
Sbjct: 61  VLIQYPEQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLI 120

Query: 121 HDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPSDLVPESRLLRV 180
           HDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTP DLVPESRLLRV
Sbjct: 121 HDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRV 180

Query: 181 VAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGEMGQCSAVCGGLLAGAEDHEVQR 240
           VAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGEM QCSAVCGGLLAGAEDHE+QR
Sbjct: 181 VAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGEMAQCSAVCGGLLAGAEDHEIQR 240

Query: 241 LRRYGRAVGVLYQVVDDILEEQAKPLDETDESKRKKGKSYVGVYGIEKAKEVAEELRTKA 300
           LRRYGRAVGVLYQVVDDILEEQ+K L+ET ESKR+KGKSYVGVYGIEKAKEVAEELRTKA
Sbjct: 241 LRRYGRAVGVLYQVVDDILEEQSKKLNETTESKRRKGKSYVGVYGIEKAKEVAEELRTKA 300

Query: 301 KKELDGFDKYGDRVMPLYSFVDYAADRSFTFESSS 336
           K EL+GF+KYGDRVMPLYSFVDYAADRSF+FE+SS
Sbjct: 301 KNELEGFEKYGDRVMPLYSFVDYAADRSFSFETSS 335

[Close]

BLAST of Lag0001335 vs. ExPASy TrEMBL
Match: A0A6J1EJ23 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111435051 PE=3 SV=1)

HSP 1 Score: 607.4 bits (1565), Expect = 3.5e-170
Identity = 307/339 (90.56%), Postives = 324/339 (95.58%), Query Frame = 0


Query: 1   MAFSVMAASSLGMHFGRKTPIRC----SSSPSSAVSTQAKSIQFDLKTYWKRLILEINQK 60
           MAFS+MAASSL M+FG K  IRC    SSS SSAVS+QAKSIQFDLKTYWK+LILEINQK
Sbjct: 32  MAFSIMAASSLRMNFGTKASIRCSSSSSSSSSSAVSSQAKSIQFDLKTYWKKLILEINQK 91

Query: 61  LVEAVPVQYPEQIYEAMRYSVLADGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHA 120
           L EAVP+QYP+QIYEAMRYSVLA+GAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHA
Sbjct: 92  LDEAVPIQYPDQIYEAMRYSVLANGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHA 151

Query: 121 ASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPSDLVPESR 180
           ASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTP DLVPESR
Sbjct: 152 ASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESR 211

Query: 181 LLRVVAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGEMGQCSAVCGGLLAGAEDH 240
           LLRVVAEIA+AVGSRGMAAGQFLDLEGGPNS+EFVQEKKFGEM QCSAVCGGLLAGAEDH
Sbjct: 212 LLRVVAEIAKAVGSRGMAAGQFLDLEGGPNSIEFVQEKKFGEMSQCSAVCGGLLAGAEDH 271

Query: 241 EVQRLRRYGRAVGVLYQVVDDILEEQAKPLDETDESKRKKGKSYVGVYGIEKAKEVAEEL 300
           EVQRLRRYGRAVGVLYQVVDDI +EQAK LD+TDESK++KGKSYVGVYGIEKAKEVAEEL
Sbjct: 272 EVQRLRRYGRAVGVLYQVVDDIRKEQAKKLDQTDESKKRKGKSYVGVYGIEKAKEVAEEL 331

Query: 301 RTKAKKELDGFDKYGDRVMPLYSFVDYAADRSFTFESSS 336
           RTKAKKEL+GF+KYGDRVMPLYSFVDYAADRSF+ ESS+
Sbjct: 332 RTKAKKELEGFEKYGDRVMPLYSFVDYAADRSFSLESST 370

[Close]

BLAST of Lag0001335 vs. ExPASy TrEMBL
Match: A0A1S3BJF3 (LOW QUALITY PROTEIN: heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103490255 PE=3 SV=1)

HSP 1 Score: 605.1 bits (1559), Expect = 1.7e-169
Identity = 305/335 (91.04%), Postives = 319/335 (95.22%), Query Frame = 0


Query: 1   MAFSVMAASSLGMHFGRKTPIRCSSSPSSAVSTQAKSIQFDLKTYWKRLILEINQKLVEA 60
           MAFS+MAASSL   FGRKTPIRCSSS SSA+S+Q KS+ FDLKTYWK+LILEINQKL EA
Sbjct: 1   MAFSLMAASSLSTSFGRKTPIRCSSSSSSALSSQTKSLHFDLKTYWKQLILEINQKLDEA 60

Query: 61  VPVQYPEQIYEAMRYSVLADGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHAASLI 120
           V +QYPEQIYEAMRYSVLA GAKRAPPVMCVAACELFGVDRLAAFPTACALEMVH ASLI
Sbjct: 61  VLIQYPEQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLI 120

Query: 121 HDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPSDLVPESRLLRV 180
           HDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTP DLVPESRLLRV
Sbjct: 121 HDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRV 180

Query: 181 VAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGEMGQCSAVCGGLLAGAEDHEVQR 240
           VAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQ KKFGEM QCSAVCGGLLAGAED E+QR
Sbjct: 181 VAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQXKKFGEMAQCSAVCGGLLAGAEDPEIQR 240

Query: 241 LRRYGRAVGVLYQVVDDILEEQAKPLDETDESKRKKGKSYVGVYGIEKAKEVAEELRTKA 300
           LRRYGRAVGVLYQVVDDILEEQ+K LDET+ESKR+KGKSYVGVYGIEKAKEVAEELRTKA
Sbjct: 241 LRRYGRAVGVLYQVVDDILEEQSKKLDETNESKRRKGKSYVGVYGIEKAKEVAEELRTKA 300

Query: 301 KKELDGFDKYGDRVMPLYSFVDYAADRSFTFESSS 336
           K EL+GF+KYGDRVMPLYSFVDYAADRSF+FE+SS
Sbjct: 301 KNELEGFEKYGDRVMPLYSFVDYAADRSFSFETSS 335

[Close]

BLAST of Lag0001335 vs. ExPASy TrEMBL
Match: A0A6J1JQ91 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111486485 PE=3 SV=1)

HSP 1 Score: 604.0 bits (1556), Expect = 3.9e-169
Identity = 305/336 (90.77%), Postives = 322/336 (95.83%), Query Frame = 0


Query: 1   MAFSVMAASSLGMHFGRKTPIRC-SSSPSSAVSTQAKSIQFDLKTYWKRLILEINQKLVE 60
           MAFS+MAASSL M+FG K  IRC SSS SSAVS+QAKSI FDLKTYWK+LILEINQKL E
Sbjct: 32  MAFSIMAASSLRMNFGTKASIRCSSSSSSSAVSSQAKSIHFDLKTYWKKLILEINQKLDE 91

Query: 61  AVPVQYPEQIYEAMRYSVLADGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHAASL 120
           AVP+QYP+QIYEAMRYSVLA+GAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHAASL
Sbjct: 92  AVPIQYPDQIYEAMRYSVLAEGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHAASL 151

Query: 121 IHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPSDLVPESRLLR 180
           IHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTP DLVPESRLLR
Sbjct: 152 IHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLR 211

Query: 181 VVAEIARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGEMGQCSAVCGGLLAGAEDHEVQ 240
           VVAEIA+AVGSRGMAAGQFLDLEGGPNS+EFVQEKKFGEM QCSAVCGGLLAGAEDHEVQ
Sbjct: 212 VVAEIAKAVGSRGMAAGQFLDLEGGPNSIEFVQEKKFGEMSQCSAVCGGLLAGAEDHEVQ 271

Query: 241 RLRRYGRAVGVLYQVVDDILEEQAKPLDETDESKRKKGKSYVGVYGIEKAKEVAEELRTK 300
           RLRRYGRAVGVLYQVVDDI +EQAK LD+TDESK++KGKSYV VYGIEKAKEVAEELRTK
Sbjct: 272 RLRRYGRAVGVLYQVVDDIRKEQAKKLDQTDESKKRKGKSYVRVYGIEKAKEVAEELRTK 331

Query: 301 AKKELDGFDKYGDRVMPLYSFVDYAADRSFTFESSS 336
           AKKEL+GF+KYGDRVMPLYSFVDYAADRSF+ ESS+
Sbjct: 332 AKKELEGFEKYGDRVMPLYSFVDYAADRSFSLESST 367

[Close]

BLAST of Lag0001335 vs. TAIR 10
Match: AT4G38460.1 (geranylgeranyl reductase )

HSP 1 Score: 411.8 bits (1057), Expect = 5.4e-115
Identity = 221/315 (70.16%), Postives = 245/315 (77.78%), Query Frame = 0


Query: 19  TPIRCSSSPSSAVSTQAKSIQFDLKTYWKRLILEINQKLVEAVPVQYPEQIYEAMRYSVL 78
           +P    SS SSA      S+ FDL+TYW  LI EINQKL EA+PV++P  IYEAMRYSVL
Sbjct: 28  SPAAIRSSSSSAPG----SLNFDLRTYWTTLITEINQKLDEAIPVKHPAGIYEAMRYSVL 87

Query: 79  ADGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPS 138
           A GAKRAPPVMCVAACELFG DRLAAFPTACALEMVHAASLIHDDLPCMDDDP RRG+PS
Sbjct: 88  AQGAKRAPPVMCVAACELFGGDRLAAFPTACALEMVHAASLIHDDLPCMDDDPVRRGKPS 147

Query: 139 NHTVYGVDMAILAGDALFPLGFQHIVSHTPSDLVPESRLLRVVAEIARAVGSRGMAAGQF 198
           NHTVYG  MAILAGDALFPL FQHIVSHTP DLVP + +LR++ EIAR VGS GMAAGQ+
Sbjct: 148 NHTVYGSGMAILAGDALFPLAFQHIVSHTPPDLVPRATILRLITEIARTVGSTGMAAGQY 207

Query: 199 LDLEGGPNSVEFVQEKKFGEMGQCSAVCGGLLAGAEDHEVQRLRRYGRAVGVLYQVVDDI 258
           +DLEGGP  + FVQEKKFG MG+CSAVCGGLL GA + E+Q LRRYGRAVG+LYQVVDDI
Sbjct: 208 VDLEGGPFPLSFVQEKKFGAMGECSAVCGGLLGGATEDELQSLRRYGRAVGMLYQVVDDI 267

Query: 259 LEEQAKPLDETDESKRKKGKSYVGVYGIEKA-KEVAEELRTKAKKELDGFD-KY--GDRV 318
            E+              K KSY G  G EK   E+AEEL+ KAKKEL  FD KY  GD +
Sbjct: 268 TED--------------KKKSYDG--GAEKGMMEMAEELKEKAKKELQVFDNKYGGGDTL 322

Query: 319 MPLYSFVDYAADRSF 330
           +PLY+FVDYAA R F
Sbjct: 328 VPLYTFVDYAAHRHF 322

[Close]

BLAST of Lag0001335 vs. TAIR 10
Match: AT4G36810.1 (geranylgeranyl pyrophosphate synthase 1 )

HSP 1 Score: 252.3 bits (643), Expect = 5.5e-67
Identity = 143/328 (43.60%), Postives = 208/328 (63.41%), Query Frame = 0


Query: 17  RKTPIRCSSSPSSAVST------QAKSIQFDLKTYWKRLILEINQKLVEAVPVQYPEQIY 76
           ++T    SS  SS+V T      Q++   FD  +Y       +N+ L  AVP++ P +I+
Sbjct: 45  KRTVSSSSSIVSSSVVTKEDNLRQSEPSSFDFMSYIITKAELVNKALDSAVPLREPLKIH 104

Query: 77  EAMRYSVLADGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHAASLIHDDLPCMDDD 136
           EAMRYS+LA G KR  PV+C+AACEL G +   A P ACA+EM+H  SLIHDDLPCMD+D
Sbjct: 105 EAMRYSLLA-GGKRVRPVLCIAACELVGGEESTAMPAACAVEMIHTMSLIHDDLPCMDND 164

Query: 137 PSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPSDLVPESRLLRVVAEIARAVGS 196
             RRG+P+NH V+G D+A+LAGDAL    F+H+ S T SD+V   R++R V E+A+A+G+
Sbjct: 165 DLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHLASATSSDVVSPVRVVRAVGELAKAIGT 224

Query: 197 RGMAAGQFLDL--EG------GPNSVEFVQEKKFGEMGQCSAVCGGLLAGAEDHEVQRLR 256
            G+ AGQ +D+  EG      G   +EF+   K   + + SAV G ++ G  D E++RLR
Sbjct: 225 EGLVAGQVVDISSEGLDLNDVGLEHLEFIHLHKTAALLEASAVLGAIVGGGSDDEIERLR 284

Query: 257 RYGRAVGVLYQVVDDILE--EQAKPLDETDESKRKKGK-SYVGVYGIEKAKEVAEELRTK 316
           ++ R +G+L+QVVDDIL+  + +K L +T        K +Y  + G+EK++E AE+L  +
Sbjct: 285 KFARCIGLLFQVVDDILDVTKSSKELGKTAGKDLIADKLTYPKIMGLEKSREFAEKLNRE 344

Query: 317 AKKELDGFDKYGDRVMPLYSFVDYAADR 328
           A+ +L GFD   D+V PL +  +Y A R
Sbjct: 345 ARDQLLGFD--SDKVAPLLALANYIAYR 369

[Close]

BLAST of Lag0001335 vs. TAIR 10
Match: AT3G29430.1 (Terpenoid synthases superfamily protein )

HSP 1 Score: 240.7 bits (613), Expect = 1.6e-63
Identity = 131/299 (43.81%), Postives = 190/299 (63.55%), Query Frame = 0


Query: 40  FDLKTYWKRLILEINQKLVEAVPVQYPEQIYEAMRYSVLADGAKRAPPVMCVAACELFGV 99
           FD K+Y  R    ++  L  +VP+Q P  I EA+RYS+LA G KR  P++C+AACEL G 
Sbjct: 61  FDFKSYMIRKAESVSAALNVSVPLQEPLTIQEAVRYSLLA-GGKRVRPLLCIAACELVGG 120

Query: 100 DRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLG 159
           D   A   ACA+EM+H +SLIHDDLPCMDD   RRG+P+NH  +G DMA+LAGDAL  L 
Sbjct: 121 DEATAMSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKEFGEDMAVLAGDALLALA 180

Query: 160 FQHIVSHTPSDLVPESRLLRVVAEIARAVGSRGMAAGQFLDL--------EGGPNSVEFV 219
           F+H ++   + LV   R++R V E+A+A+G++G+ AGQ  DL        + G   +EF+
Sbjct: 181 FEH-MTFVSNGLVAPERMIRAVMELAKAIGTKGLVAGQVTDLCSQGLNPDDVGLERLEFI 240

Query: 220 QEKKFGEMGQCSAVCGGLLAGAEDHEVQRLRRYGRAVGVLYQVVDDILE--EQAKPLDET 279
              K   + + +AV G ++ G  + E+++LR+Y R +G+L+QVVDDIL+  E  K L +T
Sbjct: 241 HLHKTAALLEAAAVLGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTESTKELGKT 300

Query: 280 DESKRKKGK-SYVGVYGIEKAKEVAEELRTKAKKELDGFDKYGDRVMPLYSFVDYAADR 328
                  GK +Y  + G+E+++EVAE+LR +A ++L GFD   D+  PL +   Y A R
Sbjct: 301 AGKDVMAGKLTYPRLIGLERSREVAEKLRREAAEQLLGFD--SDKAAPLVALASYIACR 355

[Close]

BLAST of Lag0001335 vs. TAIR 10
Match: AT3G14550.1 (geranylgeranyl pyrophosphate synthase 3 )

HSP 1 Score: 239.6 bits (610), Expect = 3.7e-63
Identity = 137/330 (41.52%), Postives = 199/330 (60.30%), Query Frame = 0


Query: 22  RCSSSPSSAVSTQA-------------KSIQFDLKTYWKRLILEINQKLVEAVPVQYPEQ 81
           R   SPSSA+++Q               +  FD K Y  R    +N  L  +VP++ P  
Sbjct: 33  RTGLSPSSALTSQGGRDMIPPEGKCNDHNSAFDFKLYMIRKAESVNAALDVSVPLREPLT 92

Query: 82  IYEAMRYSVLADGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHAASLIHDDLPCMD 141
           + EA+RYS+LA G KR  P++C+A CEL G D   A   ACA+EM+H +SLIHDDLPCMD
Sbjct: 93  VQEAVRYSLLA-GGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMD 152

Query: 142 DDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPSDLVPESRLLRVVAEIARAV 201
           +   RRG+P+NH VYG DMA+LAGDAL  L F+H ++   S LV   R++R V E+ARA+
Sbjct: 153 NADLRRGKPTNHKVYGEDMAVLAGDALLALAFEH-MTFVSSGLVAPERMIRAVVELARAI 212

Query: 202 GSRGMAAGQFLDLEG--------GPNSVEFVQEKKFGEMGQCSAVCGGLLAGAEDHEVQR 261
           G+ G+ AGQ +DL          G   +EF+   K   + + +AV G ++ G  + E+++
Sbjct: 213 GTTGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEAAAVLGVIMGGGTEEEIEK 272

Query: 262 LRRYGRAVGVLYQVVDDILE--EQAKPLDETDESKRKKGK-SYVGVYGIEKAKEVAEELR 321
           LR+Y R +G+L+QVVDDIL+  +  + L +T       GK +Y  + G+E++KEVAE+LR
Sbjct: 273 LRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLIGLERSKEVAEKLR 332

Query: 322 TKAKKELDGFDKYGDRVMPLYSFVDYAADR 328
            +A+++L GFD    +  PL +   Y A R
Sbjct: 333 REAEEQLLGFDP--SKAAPLVALASYIACR 358

[Close]

BLAST of Lag0001335 vs. TAIR 10
Match: AT3G32040.1 (Terpenoid synthases superfamily protein )

HSP 1 Score: 238.4 bits (607), Expect = 8.2e-63
Identity = 131/307 (42.67%), Postives = 193/307 (62.87%), Query Frame = 0


Query: 36  KSIQFDLKTYWKRLILEINQKLVEAVPVQYPEQIYEAMRYSVLADGAKRAPPVMCVAACE 95
           ++  FD K+Y  R    ++  L  +VP Q P  I EA+RYS+LA G KR  P++C+AACE
Sbjct: 60  RNFAFDFKSYMIRKAESVSMALNVSVPPQDPLAIQEAVRYSLLA-GGKRVRPLLCIAACE 119

Query: 96  LFGVDRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDAL 155
           L G D   A   ACA+EM+H +SLIHDDLPCMDD   RRG+P+NH V+G  MA+LAGDAL
Sbjct: 120 LVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKVFGEHMAVLAGDAL 179

Query: 156 FPLGFQHIVSHTPSDLVPESRLLRVVAEIARAVGSRGMAAGQFLDL--------EGGPNS 215
             L F+H ++   S LV   R++R V E+A+A+G++G+ AGQ  DL        + G   
Sbjct: 180 LALAFEH-MTVVSSGLVAPERMIRSVTELAKAIGTKGLVAGQVSDLCSQGLNPYDVGLER 239

Query: 216 VEFVQEKKFGEMGQCSAVCGGLLAGAEDHEVQRLRRYGRAVGVLYQVVDDILEEQAKPLD 275
           +EF+   K   + + +AV G ++ G  + E+Q+LR+YGR +G+L+QVVDDI++      +
Sbjct: 240 LEFIHLHKTAALLEAAAVLGAIIGGGTEEEIQKLRKYGRCIGLLFQVVDDIID----VTE 299

Query: 276 ETDESKRKKGK-------SYVGVYGIEKAKEVAEELRTKAKKELDGFDKYGDRVMPLYSF 328
            T+E  +  GK       +Y  + G+E+++EVAE+LR +A ++L GFD   ++V PL + 
Sbjct: 300 STEELGKTAGKDVMARKLTYPRLIGLERSREVAEKLRREAAEQLLGFD--SNKVAPLVAL 358

The following BLAST results are available for this feature:

BLAST of Lag0001335 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888577.1	1.7e-174	92.84	heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic...	[more]
TYK23377.1	3.2e-170	91.34	heterodimeric geranylgeranyl pyrophosphate synthase small subunit [Cucumis melo ...	[more]
XP_022136229.1	3.2e-170	90.75	heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic...	[more]
XP_023529740.1	4.2e-170	91.10	heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic...	[more]
XP_022928137.1	7.2e-170	90.56	heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic...	[more]

BLAST of Lag0001335 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39108	7.6e-114	70.16	Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic...	[more]
Q43133	2.0e-66	44.34	Geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic OS=Sinapis al...	[more]
P34802	7.7e-66	43.60	Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplast...	[more]
Q94ID7	8.0e-63	41.07	Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Hevea brasiliensis OX=39...	[more]
Q9LIA0	2.3e-62	43.81	Geranylgeranyl pyrophosphate synthase 11, chloroplastic OS=Arabidopsis thaliana ...	[more]

BLAST of Lag0001335 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C3B2	1.6e-170	90.75	heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic...	[more]
A0A5D3DIC5	1.6e-170	91.34	Heterodimeric geranylgeranyl pyrophosphate synthase small subunit OS=Cucumis mel...	[more]
A0A6J1EJ23	3.5e-170	90.56	heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic...	[more]
A0A1S3BJF3	1.7e-169	91.04	LOW QUALITY PROTEIN: heterodimeric geranylgeranyl pyrophosphate synthase small s...	[more]
A0A6J1JQ91	3.9e-169	90.77	heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic...	[more]

BLAST of Lag0001335 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38460.1	5.4e-115	70.16	geranylgeranyl reductase	[more]
AT4G36810.1	5.5e-67	43.60	geranylgeranyl pyrophosphate synthase 1	[more]
AT3G29430.1	1.6e-63	43.81	Terpenoid synthases superfamily protein	[more]
AT3G14550.1	3.7e-63	41.52	geranylgeranyl pyrophosphate synthase 3	[more]
AT3G32040.1	8.2e-63	42.67	Terpenoid synthases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 286..306
None	No IPR available	SFLD	SFLDS00005	Isoprenoid_Synthase_Type_I	coord: 70..311 e-value: 2.102E-43 score: 143.4
None	No IPR available	PANTHER	PTHR43281:SF5	HETERODIMERIC GERANYLGERANYL PYROPHOSPHATE SYNTHASE SMALL SUBUNIT, CHLOROPLASTIC	coord: 17..331
None	No IPR available	PANTHER	PTHR43281	FARNESYL DIPHOSPHATE SYNTHASE	coord: 17..331
IPR000092	Polyprenyl synthetase	PFAM	PF00348	polyprenyl_synt	coord: 67..265 e-value: 2.2E-32 score: 112.2
IPR000092	Polyprenyl synthetase	CDD	cd00685	Trans_IPPS_HT	coord: 66..327 e-value: 1.39273E-59 score: 190.455
IPR008949	Isoprenoid synthase domain superfamily	GENE3D	1.10.600.10	Farnesyl Diphosphate Synthase	coord: 39..335 e-value: 9.1E-84 score: 283.1
IPR008949	Isoprenoid synthase domain superfamily	SUPERFAMILY	48576	Terpenoid synthases	coord: 43..309
IPR033749	Polyprenyl synthetase, conserved site	PROSITE	PS00723	POLYPRENYL_SYNTHASE_1	coord: 119..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0001335.1	Lag0001335.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008299	isoprenoid biosynthetic process
molecular_function	GO:0004659	prenyltransferase activity