Lag0001313 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0001313
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	signal recognition particle 43 kDa protein, chloroplastic-like
Location	chr4: 29198420 .. 29199556 (-)
RNA-Seq Expression	Lag0001313
Synteny	Lag0001313

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCATGGACGCCCTCTTCCTTAACCAGTCTCTCTCCCCCAAAACCCCTCTCCCCAAACTCCCCTCTCCGACCATCCCCCACCTCCACCTCCATCTCCACCTCCATCTCCGCCGCACCTTCAAACGCTTCTCCTCCCACGCCCACCGCCTCACCCAACACTCCCACAAGCCCCCCGAAGACGACGACTCCTACGGCGAGGTCGACGGCATCATCGCCAGCCGAGTCCTCCTCGACGCCTCCGGGATGGAGTATCTCATCAAATGGAAGGACGGCCATTCCCCTTCCTGGCTCCCCTCCGATTTCATCGCCAGAGACGTCGTCGCCGAGTACGAGACCCCCTGGTGGACCGCCGCCAAGAAGGCCGACCCATCCGCCCTCCAATCGCTTATAGACGCCGCCGACGGCCGCGATCTCAACGCCATCGACGAGGACGGCAGGACCGCGCTCCTCTTCGTCGCTGGACTCGGGTCGGAGCCCTGCGTCAGGCTATTGGCCGAAGCCGGCGTGAATCTGGACCACCGCGACAACAGCGGCGGGTTCACGGCGCTGCACATGGCGGCCGGGTACGTAAAGCCCGGAACGGTGGAGTTGCTCGTGCAATTAGGCGCGGATCCGGAGGTGGAAGACGAGAAGGGTCGGACGGCGTTGGATCTAGCGAGGGAGATTCTGAAAGCGACGCCGAGGATTCAGTTGGCGAGGAGATTGGGGATGGAGAGAGTGATCGGGGCGCTGGAGAGGGTGGTTTTCGAGTACGCGGAGGTGGAGGCGCTGCTGGAGAAGAGAGGGAAGGGGGAGAATTTGGAGTATTTGGTGAAGTGGAAGGACGGGGAAGATAATGAGTGGGTGAAGGTGGGGCTGATTGCGGCGGATTTGGTGGCGGATTTTGAAGCCGGGTTGGAGTACGCGGTGGCGGAGGCGGTGGTCGGAAAAAGGGTTGGGGACGATGGGAAGATGGAGTATCTCGTCAAATGGACGGATATTCAGGATGCCACGTGGGAGCCTGAGACTAATGTAGATTCGGATTTGGTTAGGGAGTTTGAGGACGCTCAGAACAATAATGGTGGGCTTGGGCCCACTGCGAATGTTCAGGCCCAGCTTCAATCTCAGGCCCAATCCAGTAATGGTGGCCTCTGA

mRNA sequence

ATGGCCATGGACGCCCTCTTCCTTAACCAGTCTCTCTCCCCCAAAACCCCTCTCCCCAAACTCCCCTCTCCGACCATCCCCCACCTCCACCTCCATCTCCACCTCCATCTCCGCCGCACCTTCAAACGCTTCTCCTCCCACGCCCACCGCCTCACCCAACACTCCCACAAGCCCCCCGAAGACGACGACTCCTACGGCGAGGTCGACGGCATCATCGCCAGCCGAGTCCTCCTCGACGCCTCCGGGATGGAGTATCTCATCAAATGGAAGGACGGCCATTCCCCTTCCTGGCTCCCCTCCGATTTCATCGCCAGAGACGTCGTCGCCGAGTACGAGACCCCCTGGTGGACCGCCGCCAAGAAGGCCGACCCATCCGCCCTCCAATCGCTTATAGACGCCGCCGACGGCCGCGATCTCAACGCCATCGACGAGGACGGCAGGACCGCGCTCCTCTTCGTCGCTGGACTCGGGTCGGAGCCCTGCGTCAGGCTATTGGCCGAAGCCGGCGTGAATCTGGACCACCGCGACAACAGCGGCGGGTTCACGGCGCTGCACATGGCGGCCGGGTACGTAAAGCCCGGAACGGTGGAGTTGCTCGTGCAATTAGGCGCGGATCCGGAGGTGGAAGACGAGAAGGGTCGGACGGCGTTGGATCTAGCGAGGGAGATTCTGAAAGCGACGCCGAGGATTCAGTTGGCGAGGAGATTGGGGATGGAGAGAGTGATCGGGGCGCTGGAGAGGGTGGTTTTCGAGTACGCGGAGGTGGAGGCGCTGCTGGAGAAGAGAGGGAAGGGGGAGAATTTGGAGTATTTGGTGAAGTGGAAGGACGGGGAAGATAATGAGTGGGTGAAGGTGGGGCTGATTGCGGCGGATTTGGTGGCGGATTTTGAAGCCGGGTTGGAGTACGCGGTGGCGGAGGCGGTGGTCGGAAAAAGGGTTGGGGACGATGGGAAGATGGAGTATCTCGTCAAATGGACGGATATTCAGGATGCCACGTGGGAGCCTGAGACTAATGTAGATTCGGATTTGGTTAGGGAGTTTGAGGACGCTCAGAACAATAATGGTGGGCTTGGGCCCACTGCGAATGTTCAGGCCCAGCTTCAATCTCAGGCCCAATCCAGTAATGGTGGCCTCTGA

Coding sequence (CDS)

ATGGCCATGGACGCCCTCTTCCTTAACCAGTCTCTCTCCCCCAAAACCCCTCTCCCCAAACTCCCCTCTCCGACCATCCCCCACCTCCACCTCCATCTCCACCTCCATCTCCGCCGCACCTTCAAACGCTTCTCCTCCCACGCCCACCGCCTCACCCAACACTCCCACAAGCCCCCCGAAGACGACGACTCCTACGGCGAGGTCGACGGCATCATCGCCAGCCGAGTCCTCCTCGACGCCTCCGGGATGGAGTATCTCATCAAATGGAAGGACGGCCATTCCCCTTCCTGGCTCCCCTCCGATTTCATCGCCAGAGACGTCGTCGCCGAGTACGAGACCCCCTGGTGGACCGCCGCCAAGAAGGCCGACCCATCCGCCCTCCAATCGCTTATAGACGCCGCCGACGGCCGCGATCTCAACGCCATCGACGAGGACGGCAGGACCGCGCTCCTCTTCGTCGCTGGACTCGGGTCGGAGCCCTGCGTCAGGCTATTGGCCGAAGCCGGCGTGAATCTGGACCACCGCGACAACAGCGGCGGGTTCACGGCGCTGCACATGGCGGCCGGGTACGTAAAGCCCGGAACGGTGGAGTTGCTCGTGCAATTAGGCGCGGATCCGGAGGTGGAAGACGAGAAGGGTCGGACGGCGTTGGATCTAGCGAGGGAGATTCTGAAAGCGACGCCGAGGATTCAGTTGGCGAGGAGATTGGGGATGGAGAGAGTGATCGGGGCGCTGGAGAGGGTGGTTTTCGAGTACGCGGAGGTGGAGGCGCTGCTGGAGAAGAGAGGGAAGGGGGAGAATTTGGAGTATTTGGTGAAGTGGAAGGACGGGGAAGATAATGAGTGGGTGAAGGTGGGGCTGATTGCGGCGGATTTGGTGGCGGATTTTGAAGCCGGGTTGGAGTACGCGGTGGCGGAGGCGGTGGTCGGAAAAAGGGTTGGGGACGATGGGAAGATGGAGTATCTCGTCAAATGGACGGATATTCAGGATGCCACGTGGGAGCCTGAGACTAATGTAGATTCGGATTTGGTTAGGGAGTTTGAGGACGCTCAGAACAATAATGGTGGGCTTGGGCCCACTGCGAATGTTCAGGCCCAGCTTCAATCTCAGGCCCAATCCAGTAATGGTGGCCTCTGA

Protein sequence

MAMDALFLNQSLSPKTPLPKLPSPTIPHLHLHLHLHLRRTFKRFSSHAHRLTQHSHKPPEDDDSYGEVDGIIASRVLLDASGMEYLIKWKDGHSPSWLPSDFIARDVVAEYETPWWTAAKKADPSALQSLIDAADGRDLNAIDEDGRTALLFVAGLGSEPCVRLLAEAGVNLDHRDNSGGFTALHMAAGYVKPGTVELLVQLGADPEVEDEKGRTALDLAREILKATPRIQLARRLGMERVIGALERVVFEYAEVEALLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAADLVADFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPETNVDSDLVREFEDAQNNNGGLGPTANVQAQLQSQAQSSNGGL

Homology

[Close]

BLAST of Lag0001313 vs. NCBI nr
Match: XP_023529738.1 (signal recognition particle 43 kDa protein, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 585.5 bits (1508), Expect = 3.3e-163
Identity = 304/385 (78.96%), Postives = 332/385 (86.23%), Query Frame = 0


Query: 3   MDALFLNQSLS-----PKTPLPKLPSPTIPHLHLHLHLHLRRTFKRFSSHA--HRLTQHS 62
           MDA+F+NQSLS     PK PLPKLPSP      LHLHLHLRRTFK F+++A    LTQ +
Sbjct: 1   MDAVFVNQSLSRLKLPPKPPLPKLPSPI-----LHLHLHLRRTFKSFTAYAVNEPLTQQT 60

Query: 63  HKP---PEDDDSYGEVDGIIASRVLLDASGMEYLIKWKDGHSPSWLPSDFIARDVVAEYE 122
            +P   PEDD+SYGEVDGII SR L DA+GMEYLIKWKDGHSPSW+PSDFIA+DVVAEYE
Sbjct: 61  QQPDDFPEDDESYGEVDGIIGSRALADATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYE 120

Query: 123 TPWWTAAKKADPSALQSLIDAADGRDLNAIDEDGRTALLFVAGLGSEPCVRLLAEAGVNL 182
           TPWWTAAKKAD SAL+SLIDAAD RD NA+DED RTALLFVAGLGSEPCVR+LAEAG NL
Sbjct: 121 TPWWTAAKKADESALKSLIDAADSRDFNAVDEDSRTALLFVAGLGSEPCVRILAEAGANL 180

Query: 183 DHRDNSGGFTALHMAAGYVKPGTVELLVQLGADPEVEDEKGRTALDLAREILKATPRIQL 242
           DHRD SGGFTALHMAAGYVKPGTVELL++LGADPEV+D+KGRT L LAREI+KATPR+Q 
Sbjct: 181 DHRDKSGGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQF 240

Query: 243 ARRLGMERVIGALERVVFEYAEVEALLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAADL 302
           ARRLG+ERVIGALERVVFE+AEVE LLEKRGKGENLEYLVKWKDGEDNEWVK  LIA DL
Sbjct: 241 ARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDL 300

Query: 303 VADFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPETNVDSDLVREFEDAQN 362
           VADFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDI+DATWEPE NVDSDLV EFE  Q 
Sbjct: 301 VADFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIEDATWEPEGNVDSDLVTEFETGQK 360

Query: 363 NNGGLGPTANVQAQLQSQAQSSNGG 378
           + G  GP +++      +AQSSNGG
Sbjct: 361 SVGP-GPISDL------EAQSSNGG 373

[Close]

BLAST of Lag0001313 vs. NCBI nr
Match: XP_022928488.1 (signal recognition particle 43 kDa protein, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 582.4 bits (1500), Expect = 2.8e-162
Identity = 302/386 (78.24%), Postives = 332/386 (86.01%), Query Frame = 0


Query: 2   AMDALFLNQSLS-----PKTPLPKLPSPTIPHLHLHLHLHLRRTFKRFSSHA--HRLTQH 61
           AMDA+F+NQSLS     PK PLPKLPSP        LHLHLRRTFK F+++A    LTQ 
Sbjct: 56  AMDAVFVNQSLSRLKLPPKPPLPKLPSPI-------LHLHLRRTFKSFTAYAVNEPLTQQ 115

Query: 62  SHKP---PEDDDSYGEVDGIIASRVLLDASGMEYLIKWKDGHSPSWLPSDFIARDVVAEY 121
           + +P   PEDD+SYGEVDGII SR L DA+GMEYLIKWKDGHSPSW+PSDFIA+DVVAEY
Sbjct: 116 TQQPDNFPEDDESYGEVDGIIGSRALADATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEY 175

Query: 122 ETPWWTAAKKADPSALQSLIDAADGRDLNAIDEDGRTALLFVAGLGSEPCVRLLAEAGVN 181
           ETPWWTAAKKAD SAL+SLIDAAD RD NA+DEDGRTALLFVAGLGSEPC+R+LAEAG +
Sbjct: 176 ETPWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGAD 235

Query: 182 LDHRDNSGGFTALHMAAGYVKPGTVELLVQLGADPEVEDEKGRTALDLAREILKATPRIQ 241
           LDHRD SGGFTALHMAAGYVKPGTVELL++LGADPEV+D+KGRT L LAREI+KATPR+Q
Sbjct: 236 LDHRDKSGGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQ 295

Query: 242 LARRLGMERVIGALERVVFEYAEVEALLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAAD 301
            ARRLG+ERVIGALERVVFE+AEVE LLEKRGKGENLEYLVKWKDGEDNEWVK  LIA D
Sbjct: 296 FARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAED 355

Query: 302 LVADFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPETNVDSDLVREFEDAQ 361
           LVADFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDI+DATWEPE NVDSDLV EFE  Q
Sbjct: 356 LVADFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIEDATWEPEGNVDSDLVTEFETGQ 415

Query: 362 NNNGGLGPTANVQAQLQSQAQSSNGG 378
            + G  GP +++      +AQSSNGG
Sbjct: 416 KSVGP-GPISDL------EAQSSNGG 427

[Close]

BLAST of Lag0001313 vs. NCBI nr
Match: XP_022989400.1 (signal recognition particle 43 kDa protein, chloroplastic [Cucurbita maxima])

HSP 1 Score: 581.3 bits (1497), Expect = 6.2e-162
Identity = 301/386 (77.98%), Postives = 333/386 (86.27%), Query Frame = 0


Query: 2   AMDALFLNQSLS-----PKTPLPKLPSPTIPHLHLHLHLHLRRTFKRFSSHA--HRLTQH 61
           AMDA+F+NQSLS     PK PLPKLPSP        LHLHLRRTFK F+++A    LTQ 
Sbjct: 49  AMDAVFVNQSLSSLKLPPKPPLPKLPSPI-------LHLHLRRTFKSFTAYAVNEPLTQQ 108

Query: 62  SHKP---PEDDDSYGEVDGIIASRVLLDASGMEYLIKWKDGHSPSWLPSDFIARDVVAEY 121
           + +P   PEDD+SYGEVDGII SR L DA+GMEYLIKWKDGHSPSW+PSDFIA+DVVAEY
Sbjct: 109 TQQPDNFPEDDESYGEVDGIIGSRSLADATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEY 168

Query: 122 ETPWWTAAKKADPSALQSLIDAADGRDLNAIDEDGRTALLFVAGLGSEPCVRLLAEAGVN 181
           ETPWWTAAKKAD SAL+SLIDAAD RD NA+DEDGRTALLFVAGLGSEPCVR+LAEAG +
Sbjct: 169 ETPWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCVRILAEAGAD 228

Query: 182 LDHRDNSGGFTALHMAAGYVKPGTVELLVQLGADPEVEDEKGRTALDLAREILKATPRIQ 241
           LDHRD SGGFTALHMAAGYVKPGTVELL++LGADPEV+D+KGRT L LAREI+KATPR+Q
Sbjct: 229 LDHRDKSGGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQ 288

Query: 242 LARRLGMERVIGALERVVFEYAEVEALLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAAD 301
            ARRLG+ERVIGALERVVFE+AEVE LLEKRGKGENLEYLVKWKDGEDNEWVK  LIA D
Sbjct: 289 FARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAED 348

Query: 302 LVADFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPETNVDSDLVREFEDAQ 361
           LVADFEAGLEYAVAEAVVGKR+GDDGKMEYLVKWTDI+DATWEPE NVDSDL+ EFE  Q
Sbjct: 349 LVADFEAGLEYAVAEAVVGKRLGDDGKMEYLVKWTDIEDATWEPEGNVDSDLIAEFETGQ 408

Query: 362 NNNGGLGPTANVQAQLQSQAQSSNGG 378
            + G  GP++++      +AQSSNGG
Sbjct: 409 KSVGP-GPSSDL------EAQSSNGG 420

[Close]

BLAST of Lag0001313 vs. NCBI nr
Match: KAG6589032.1 (Signal recognition particle 43 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 580.5 bits (1495), Expect = 1.1e-161
Identity = 301/385 (78.18%), Postives = 331/385 (85.97%), Query Frame = 0


Query: 3   MDALFLNQSLS-----PKTPLPKLPSPTIPHLHLHLHLHLRRTFKRFSSHA--HRLTQHS 62
           MDA+F+NQSLS     PK PLPKLPSP        LHLHLRRTFK F+++A    LTQ +
Sbjct: 1   MDAVFVNQSLSRLKLPPKPPLPKLPSPI-------LHLHLRRTFKSFTAYAVNEPLTQQT 60

Query: 63  HKP---PEDDDSYGEVDGIIASRVLLDASGMEYLIKWKDGHSPSWLPSDFIARDVVAEYE 122
            +P   PEDD+SYGEVDGII SR L DA+GMEYLIKWKDGHSPSW+PSDFIA+DVVAEYE
Sbjct: 61  QQPDNFPEDDESYGEVDGIIGSRALADATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYE 120

Query: 123 TPWWTAAKKADPSALQSLIDAADGRDLNAIDEDGRTALLFVAGLGSEPCVRLLAEAGVNL 182
           TPWWTAAKKAD SAL+SLIDAAD RD NA+DEDGRTALLFVAGLGSEPC+R+LAEAG +L
Sbjct: 121 TPWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADL 180

Query: 183 DHRDNSGGFTALHMAAGYVKPGTVELLVQLGADPEVEDEKGRTALDLAREILKATPRIQL 242
           DHRD SGGFTALHMAAGYVKPGTVELL++LGADPEV+D+KGRT L LAREI+KATPR+Q 
Sbjct: 181 DHRDKSGGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQF 240

Query: 243 ARRLGMERVIGALERVVFEYAEVEALLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAADL 302
           ARRLG+ERVIGALERVVFE+AEVE LLEKRGKGENLEYLVKWKDGEDNEWVK  LIA DL
Sbjct: 241 ARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDL 300

Query: 303 VADFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPETNVDSDLVREFEDAQN 362
           VADFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDI+DATWEPE NVDSDLV EFE  Q 
Sbjct: 301 VADFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIEDATWEPEGNVDSDLVTEFETGQK 360

Query: 363 NNGGLGPTANVQAQLQSQAQSSNGG 378
           + G  GP +++      +AQSSNGG
Sbjct: 361 SVGP-GPISDL------EAQSSNGG 371

[Close]

BLAST of Lag0001313 vs. NCBI nr
Match: XP_038888741.1 (signal recognition particle 43 kDa protein, chloroplastic [Benincasa hispida])

HSP 1 Score: 561.6 bits (1446), Expect = 5.1e-156
Identity = 293/383 (76.50%), Postives = 321/383 (83.81%), Query Frame = 0


Query: 3   MDALFLNQS-----LSPKTPLPKLPSPTIPHLHLHLHLHLRRTFKRFSSHA----HRLTQ 62
           MDA+F+NQS     LSPK PLP  PS +      + HL+LRR FK F+ +A      LTQ
Sbjct: 1   MDAVFVNQSLSRLKLSPKPPLPFPPSSS----SRNPHLNLRRNFKHFTPYAVQSDQPLTQ 60

Query: 63  HSHKPPEDDDSYGEVDGIIASRVLLDASGMEYLIKWKDGHSPSWLPSDFIARDVVAEYET 122
            + K  EDD+SYGEVDGII SR L DA+GMEYLIKWKDGHSPSW+PSDFIA+DVVAEYET
Sbjct: 61  QTQK-SEDDESYGEVDGIIGSRALSDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYET 120

Query: 123 PWWTAAKKADPSALQSLIDAADGRDLNAIDEDGRTALLFVAGLGSEPCVRLLAEAGVNLD 182
           PWWTAAKKAD SAL+SLIDA DGRD +A+DEDGRTALLFVAGLGS PCVR+LAEAGVNLD
Sbjct: 121 PWWTAAKKADESALKSLIDAGDGRDFDAVDEDGRTALLFVAGLGSNPCVRMLAEAGVNLD 180

Query: 183 HRDNSGGFTALHMAAGYVKPGTVELLVQLGADPEVEDEKGRTALDLAREILKATPRIQLA 242
           HRDNSGGFTALH+AAGYVKP TVELLV+LGADPE+EDEKGRT L LA+EILKATPR+Q  
Sbjct: 181 HRDNSGGFTALHLAAGYVKPETVELLVELGADPEIEDEKGRTPLVLAKEILKATPRVQFM 240

Query: 243 RRLGMERVIGALERVVFEYAEVEALLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAADLV 302
           RR+G+ERVIGA+E+VV+EYAEVE LLEKRGKGENLEYLVKWKDGEDNEWVKVGLIA DLV
Sbjct: 241 RRIGLERVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLV 300

Query: 303 ADFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPETNVDSDLVREFEDAQNN 362
           ADFEAGLEYAVAEAVVGKR GDDGKMEYLVKWTDIQDATWEP+ NVD DL+ EFE AQ  
Sbjct: 301 ADFEAGLEYAVAEAVVGKRFGDDGKMEYLVKWTDIQDATWEPQDNVDPDLIAEFEKAQ-- 360

Query: 363 NGGLGPTANVQAQLQSQAQSSNG 377
                     Q Q QSQAQSSNG
Sbjct: 361 -----AQPQAQPQAQSQAQSSNG 371

[Close]

BLAST of Lag0001313 vs. ExPASy Swiss-Prot
Match: O22265 (Signal recognition particle 43 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CAO PE=1 SV=2)

HSP 1 Score: 387.9 bits (995), Expect = 1.3e-106
Identity = 216/371 (58.22%), Postives = 266/371 (71.70%), Query Frame = 0


Query: 1   MAMD--ALFLNQSLSPKTPLPKLPSPTIPHLHLHLHLHLRRTFKRFS-------SHAHRL 60
           +AMD  AL ++QSLS     P   S +         L +RR    F           +  
Sbjct: 6   LAMDTCALVIHQSLSRIKLSPPKSSSSSSSAFSPESLPIRRIELCFRGAICAAVQRNYEE 65

Query: 61  TQHSHKPPEDDD----SYGEVDGIIASRVLLDASGMEYLIKWKDGHSPSWLPSDFIARDV 120
           T  S +  E+DD    SYGEV+ II SR   + + MEYLI+WKDGHSPSW+PS +IA DV
Sbjct: 66  TTSSVEEAEEDDESSSSYGEVNKIIGSRTAGEGA-MEYLIEWKDGHSPSWVPSSYIAADV 125

Query: 121 VAEYETPWWTAAKKADPSALQSLIDAADGRDLNAIDEDGRTALLFVAGLGSEPCVRLLAE 180
           V+EYETPWWTAA+KAD  AL  L+   + RD++A+DE+GRTALLFVAGLGS+ CVRLLAE
Sbjct: 126 VSEYETPWWTAARKADEQALSQLL---EDRDVDAVDENGRTALLFVAGLGSDKCVRLLAE 185

Query: 181 AGVNLDHRDNSGGFTALHMAAGYVKPGTVELLVQLGADPEVEDEKGRTALDLAREILKAT 240
           AG +LDHRD  GG TALHMAAGYV+P  VE LV+LGAD EVEDE+G TAL+LAREILK T
Sbjct: 186 AGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTT 245

Query: 241 PR---IQLARRLGMERVIGALERVVFEYAEVEALLEKRGKGENLEYLVKWKDGEDNEWVK 300
           P+   +Q  RR+G+E+VI  LE  VFEYAEV+ ++EKRGKG+++EYLV+WKDG D EWVK
Sbjct: 246 PKGNPMQFGRRIGLEKVINVLEGQVFEYAEVDEIVEKRGKGKDVEYLVRWKDGGDCEWVK 305

Query: 301 VGLIAADLVADFEAGLEYAVAEAVVGKRVGDDGK-MEYLVKWTDIQDATWEPETNVDSDL 355
              +A D+  D+E GLEYAVAE+V+GKRVGDDGK +EYLVKWTD+ DATWEP+ NVDS L
Sbjct: 306 GVHVAEDVAKDYEDGLEYAVAESVIGKRVGDDGKTIEYLVKWTDMSDATWEPQDNVDSTL 365

[Close]

BLAST of Lag0001313 vs. ExPASy Swiss-Prot
Match: Q8LSQ2 (Probable signal recognition particle 43 kDa protein, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0131900 PE=2 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 7.6e-86
Identity = 175/373 (46.92%), Postives = 242/373 (64.88%), Query Frame = 0


Query: 3   MDALFLNQSLSPKTPLPKLPSPTIPHLHLHLHLHLRRTFKRFSSHAHRLTQHSHKPP--- 62
           M+A+  + SLS   P P   +   P L + +   LR   +R ++ A    Q + + P   
Sbjct: 1   MEAVLRHPSLSRLKP-PNPNAQRTPALSITVPFRLRLPNRRLTAAAVFQDQTNPRNPASK 60

Query: 63  --EDDDSYGEVDGIIASRVLLD-----------ASGMEYLIKWKDGHSPSWLPSDFIARD 122
             +DD++YGEVD I++SR + +            +  EYL++WKDGH PSW+P++ IA D
Sbjct: 61  GGDDDEAYGEVDRIVSSRTIKNPVFAEDGSATTVTATEYLVEWKDGHEPSWIPAEAIAAD 120

Query: 123 VVAEYETPWWTAAKKADPSALQSLI-DAADGRDLNAIDEDGRTALLFVAGLGSEPCVRLL 182
           VVAEYETPWWTAAKKAD + + +L+ D    RD +A D  GRTA+ F AGLGSE CVR L
Sbjct: 121 VVAEYETPWWTAAKKADAAEITALLADETLRRDPDAEDAQGRTAMHFAAGLGSEECVRAL 180

Query: 183 AEAGVNLDHRDNS-GGFTALHMAAGYVKPGTVELLVQLGADPEVEDEKGRTALDLAREIL 242
           AEAG ++   + + GG T LH+A GY +P  V  L++LGA+PE  D +GRT L+L +++L
Sbjct: 181 AEAGADVGRPERAGGGLTPLHIAVGYGRPAAVRALLELGAEPEAPDGQGRTPLELVQDVL 240

Query: 243 KATPR---IQLARRLGMERVIGALERVVFEYAEVEALLEKRGKGENLEYLVKWKDGEDNE 302
             TP+       RRL +E     LE+ V+E+ EVE +++ RG+G+  EYLV+W+DG D E
Sbjct: 241 AKTPKGNPATFERRLALEAAAKELEKAVYEWGEVEKVVDGRGEGKWREYLVEWRDGGDRE 300

Query: 303 WVKVGLIAADLVADFEAGLEYAVAEAVVGKR--VGDDGKMEYLVKWTDIQDATWEPETNV 353
           WV+   +A DLV DF+AGLEYAVAEAVV KR     +GK EYLVKW DI++ATWEP  NV
Sbjct: 301 WVRAAWVAEDLVKDFDAGLEYAVAEAVVNKREAAEGEGKWEYLVKWVDIEEATWEPAENV 360

[Close]

BLAST of Lag0001313 vs. ExPASy Swiss-Prot
Match: Q8Q0U0 (Putative ankyrin repeat protein MM_0045 OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) OX=192952 GN=MM_0045 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 8.0e-11
Identity = 42/106 (39.62%), Postives = 61/106 (57.55%), Query Frame = 0


Query: 118 AAKKADPSALQSLIDAADGRDLNAIDEDGRTALLFVAGLGSEPCVRLLAEAGVNLDHRDN 177
           A K      ++ L++A  G DLN  D++G TAL++ A  G    V LL E G +L+  D 
Sbjct: 240 ATKIGHKGIVELLVNA--GADLNLQDKNGNTALIYAADRGYRDIVNLLIEGGASLNIPDE 299

Query: 178 SGGFTALHMAAGYVKPGTVELLVQLGADPEVEDEKGRTALDLAREI 224
           + G TAL  +A   +   VELL++ GAD  +ED+  +TA DLA E+
Sbjct: 300 A-GLTALMFSAQTGRKDIVELLIKAGADINIEDKNNKTAADLAAEV 342

[Close]

BLAST of Lag0001313 vs. ExPASy Swiss-Prot
Match: Q06527 (Ankyrin homolog OS=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / NCIMB 10441 / D) OX=572477 GN=Alvin_1094 PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 5.2e-10
Identity = 46/108 (42.59%), Postives = 54/108 (50.00%), Query Frame = 0


Query: 110 EYETPWWTAAKKADPSALQSLIDAADGRDLNAIDEDGRTALLFVAGLGSEPCVRLLAEAG 169
           E  T    AA K +   L  LI+   G DL A D+ G TALL  A  G    V  LA  G
Sbjct: 163 EGRTALMQAASKGETGVLPLLIEG--GADLEARDKQGATALLIAADQGQAGAVETLAGLG 222

Query: 170 VNLDHRDNSGGFTALHMAAGYVKPGTVELLVQLGADPEVEDEKGRTAL 218
             LD  D  G  TAL +A G+     VE L+ +GADP  +D KG TAL
Sbjct: 223 AQLDAVDALGS-TALILAVGHGHVAMVERLLAMGADPNRQDRKGTTAL 267

[Close]

BLAST of Lag0001313 vs. ExPASy Swiss-Prot
Match: Q9FY74 (Calmodulin-binding transcription activator 1 OS=Arabidopsis thaliana OX=3702 GN=CAMTA1 PE=1 SV=2)

HSP 1 Score: 64.7 bits (156), Expect = 2.6e-09
Identity = 40/92 (43.48%), Postives = 56/92 (60.87%), Query Frame = 0


Query: 135 DGRDLNAIDEDGRTALLFVAGLGSEPCVRLLAEAGVNLDHRDNSGGFTALHMAAGYVKPG 194
           +G+  N +DEDG+  L FVA LG +  ++ +  AGVN++ RD + G++ALH AA   +  
Sbjct: 602 EGKGPNILDEDGQGILHFVAALGYDWAIKPVLAAGVNINFRD-ANGWSALHWAAFSGREE 661

Query: 195 TVELLVQLGA------DPEVEDEKGRTALDLA 221
           TV +LV LGA      DP  E   G+TA DLA
Sbjct: 662 TVAVLVSLGADAGALTDPSPELPLGKTAADLA 692

[Close]

BLAST of Lag0001313 vs. ExPASy TrEMBL
Match: A0A6J1EP65 (signal recognition particle 43 kDa protein, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111435281 PE=4 SV=1)

HSP 1 Score: 582.4 bits (1500), Expect = 1.4e-162
Identity = 302/386 (78.24%), Postives = 332/386 (86.01%), Query Frame = 0


Query: 2   AMDALFLNQSLS-----PKTPLPKLPSPTIPHLHLHLHLHLRRTFKRFSSHA--HRLTQH 61
           AMDA+F+NQSLS     PK PLPKLPSP        LHLHLRRTFK F+++A    LTQ 
Sbjct: 56  AMDAVFVNQSLSRLKLPPKPPLPKLPSPI-------LHLHLRRTFKSFTAYAVNEPLTQQ 115

Query: 62  SHKP---PEDDDSYGEVDGIIASRVLLDASGMEYLIKWKDGHSPSWLPSDFIARDVVAEY 121
           + +P   PEDD+SYGEVDGII SR L DA+GMEYLIKWKDGHSPSW+PSDFIA+DVVAEY
Sbjct: 116 TQQPDNFPEDDESYGEVDGIIGSRALADATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEY 175

Query: 122 ETPWWTAAKKADPSALQSLIDAADGRDLNAIDEDGRTALLFVAGLGSEPCVRLLAEAGVN 181
           ETPWWTAAKKAD SAL+SLIDAAD RD NA+DEDGRTALLFVAGLGSEPC+R+LAEAG +
Sbjct: 176 ETPWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGAD 235

Query: 182 LDHRDNSGGFTALHMAAGYVKPGTVELLVQLGADPEVEDEKGRTALDLAREILKATPRIQ 241
           LDHRD SGGFTALHMAAGYVKPGTVELL++LGADPEV+D+KGRT L LAREI+KATPR+Q
Sbjct: 236 LDHRDKSGGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQ 295

Query: 242 LARRLGMERVIGALERVVFEYAEVEALLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAAD 301
            ARRLG+ERVIGALERVVFE+AEVE LLEKRGKGENLEYLVKWKDGEDNEWVK  LIA D
Sbjct: 296 FARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAED 355

Query: 302 LVADFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPETNVDSDLVREFEDAQ 361
           LVADFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDI+DATWEPE NVDSDLV EFE  Q
Sbjct: 356 LVADFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIEDATWEPEGNVDSDLVTEFETGQ 415

Query: 362 NNNGGLGPTANVQAQLQSQAQSSNGG 378
            + G  GP +++      +AQSSNGG
Sbjct: 416 KSVGP-GPISDL------EAQSSNGG 427

[Close]

BLAST of Lag0001313 vs. ExPASy TrEMBL
Match: A0A6J1JM92 (signal recognition particle 43 kDa protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111486468 PE=4 SV=1)

HSP 1 Score: 581.3 bits (1497), Expect = 3.0e-162
Identity = 301/386 (77.98%), Postives = 333/386 (86.27%), Query Frame = 0


Query: 2   AMDALFLNQSLS-----PKTPLPKLPSPTIPHLHLHLHLHLRRTFKRFSSHA--HRLTQH 61
           AMDA+F+NQSLS     PK PLPKLPSP        LHLHLRRTFK F+++A    LTQ 
Sbjct: 49  AMDAVFVNQSLSSLKLPPKPPLPKLPSPI-------LHLHLRRTFKSFTAYAVNEPLTQQ 108

Query: 62  SHKP---PEDDDSYGEVDGIIASRVLLDASGMEYLIKWKDGHSPSWLPSDFIARDVVAEY 121
           + +P   PEDD+SYGEVDGII SR L DA+GMEYLIKWKDGHSPSW+PSDFIA+DVVAEY
Sbjct: 109 TQQPDNFPEDDESYGEVDGIIGSRSLADATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEY 168

Query: 122 ETPWWTAAKKADPSALQSLIDAADGRDLNAIDEDGRTALLFVAGLGSEPCVRLLAEAGVN 181
           ETPWWTAAKKAD SAL+SLIDAAD RD NA+DEDGRTALLFVAGLGSEPCVR+LAEAG +
Sbjct: 169 ETPWWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCVRILAEAGAD 228

Query: 182 LDHRDNSGGFTALHMAAGYVKPGTVELLVQLGADPEVEDEKGRTALDLAREILKATPRIQ 241
           LDHRD SGGFTALHMAAGYVKPGTVELL++LGADPEV+D+KGRT L LAREI+KATPR+Q
Sbjct: 229 LDHRDKSGGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQ 288

Query: 242 LARRLGMERVIGALERVVFEYAEVEALLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAAD 301
            ARRLG+ERVIGALERVVFE+AEVE LLEKRGKGENLEYLVKWKDGEDNEWVK  LIA D
Sbjct: 289 FARRLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAED 348

Query: 302 LVADFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPETNVDSDLVREFEDAQ 361
           LVADFEAGLEYAVAEAVVGKR+GDDGKMEYLVKWTDI+DATWEPE NVDSDL+ EFE  Q
Sbjct: 349 LVADFEAGLEYAVAEAVVGKRLGDDGKMEYLVKWTDIEDATWEPEGNVDSDLIAEFETGQ 408

Query: 362 NNNGGLGPTANVQAQLQSQAQSSNGG 378
            + G  GP++++      +AQSSNGG
Sbjct: 409 KSVGP-GPSSDL------EAQSSNGG 420

[Close]

BLAST of Lag0001313 vs. ExPASy TrEMBL
Match: A0A1S3BHX6 (signal recognition particle 43 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103490246 PE=4 SV=1)

HSP 1 Score: 548.9 bits (1413), Expect = 1.7e-152
Identity = 284/371 (76.55%), Postives = 318/371 (85.71%), Query Frame = 0


Query: 3   MDALFLNQSLS-----PKTPLPKLPSP---TIPHLHLHLHLHLRRTFKRFSSHA----HR 62
           M+A+FLNQSLS     PK PLP LP P   TIP      HL+LRR F  F+++A      
Sbjct: 1   MEAVFLNQSLSRLKLPPKPPLP-LPIPFPSTIP------HLNLRRNFTHFTAYAVQSDQP 60

Query: 63  LTQHSHKPPEDDDSYGEVDGIIASRVLLDASGMEYLIKWKDGHSPSWLPSDFIARDVVAE 122
           +TQ ++K PEDD+SYGEVDGII SR L DA+GMEYLIKWKDGHSPSW+PSDFIA+DVVAE
Sbjct: 61  ITQQTYK-PEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAE 120

Query: 123 YETPWWTAAKKADPSALQSLIDAADGRDLNAIDEDGRTALLFVAGLGSEPCVRLLAEAGV 182
           YETPWWTAAKKAD SAL+SLID+ D RD +A+DEDGRTALLFV+GLGS  CVR+LAEAGV
Sbjct: 121 YETPWWTAAKKADKSALESLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILAEAGV 180

Query: 183 NLDHRDNSGGFTALHMAAGYVKPGTVELLVQLGADPEVEDEKGRTALDLAREILKATPRI 242
           NL+HRDNSGGFTALHMAAGYVKP TVELLV+LGADPE+EDEKGRTAL+LA+EILKATPR+
Sbjct: 181 NLNHRDNSGGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTALELAKEILKATPRV 240

Query: 243 QLARRLGMERVIGALERVVFEYAEVEALLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAA 302
           Q  RRLG+E+VIGA+E+VV+EYAEVE LLEKRGKGENLEYLVKWKDGEDNEWVKVGLIA 
Sbjct: 241 QFMRRLGLEKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAE 300

Query: 303 DLVADFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPETNVDSDLVREFEDA 362
           DLVAD+EAGLEYAVAEAVVGKRVGD+GKMEYLVKWTDIQDATWEP  NVD DL+ EFE A
Sbjct: 301 DLVADYEAGLEYAVAEAVVGKRVGDEGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKA 360

[Close]

BLAST of Lag0001313 vs. ExPASy TrEMBL
Match: A0A0A0K634 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G018780 PE=4 SV=1)

HSP 1 Score: 542.0 bits (1395), Expect = 2.0e-150
Identity = 278/358 (77.65%), Postives = 311/358 (86.87%), Query Frame = 0


Query: 3   MDALFLNQSLS-----PKTPLPKLPSPTIPHLHLHLHLHLRRTFKRFSSHA----HRLTQ 62
           M+A+FLNQSLS     PKTPLP  PSP IP      HL+LRR F  F+++A      +TQ
Sbjct: 1   MEAVFLNQSLSRLKLPPKTPLP-FPSP-IP------HLNLRRNFTHFTAYAVQSDQPITQ 60

Query: 63  HSHKPPEDDDSYGEVDGIIASRVLLDASGMEYLIKWKDGHSPSWLPSDFIARDVVAEYET 122
            + K PEDD+SYGEVDGII SR L DA+GMEYLIKWKDGHSPSW+PSDFIA+DVVAEYET
Sbjct: 61  QTQK-PEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYET 120

Query: 123 PWWTAAKKADPSALQSLIDAADGRDLNAIDEDGRTALLFVAGLGSEPCVRLLAEAGVNLD 182
           PWWTAAKKAD SAL+SLID+ D RD +A+DEDGRTALLFV+GLGS  CVR+LA+AGVNL+
Sbjct: 121 PWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLN 180

Query: 183 HRDNSGGFTALHMAAGYVKPGTVELLVQLGADPEVEDEKGRTALDLAREILKATPRIQLA 242
           HRDNSGGFTALHMAAGYVKP TVELLV+LGADPE++DEKGRTAL+LA+EILKATPR+Q  
Sbjct: 181 HRDNSGGFTALHMAAGYVKPETVELLVELGADPEIDDEKGRTALELAKEILKATPRVQFM 240

Query: 243 RRLGMERVIGALERVVFEYAEVEALLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAADLV 302
           RRLG+E+VI A+E+VV+EYAEVE LLEKRGKGENLEYLVKWKDGEDNEWVKVGLIA DLV
Sbjct: 241 RRLGLEKVIRAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLV 300

Query: 303 ADFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPETNVDSDLVREFEDAQ 352
            D+EAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEP  NVD DL+ EFE AQ
Sbjct: 301 GDYEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQ 349

[Close]

BLAST of Lag0001313 vs. ExPASy TrEMBL
Match: A0A6J1C248 (signal recognition particle 43 kDa protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111007575 PE=4 SV=1)

HSP 1 Score: 532.7 bits (1371), Expect = 1.2e-147
Identity = 275/363 (75.76%), Postives = 306/363 (84.30%), Query Frame = 0


Query: 3   MDALFLNQS-----LSPK-TPLPKLPSPTIPHLHLHLHLHLRRTFKRFSSHAHRLTQHSH 62
           MDALFLNQS     +SPK +PLP L    IP+ +L       +  +R +  ++     S 
Sbjct: 1   MDALFLNQSISRLKISPKSSPLPPLYPSRIPNRNLKFSACAVQNDQRLAQQSNAAI--SA 60

Query: 63  KPPEDDDSYGEVDGIIASRVLLDASGMEYLIKWKDGHSPSWLPSDFIARDVVAEYETPWW 122
               +D++YGEVDGII SR L D SGMEYLI WKDGH+PSW+PSDFIARDVVAEYETPWW
Sbjct: 61  GKFNEDETYGEVDGIIGSRALQDGSGMEYLIAWKDGHAPSWVPSDFIARDVVAEYETPWW 120

Query: 123 TAAKKADPSALQSLIDAADGRDLNAIDEDGRTALLFVAGLGSEPCVRLLAEAGVNLDHRD 182
           TAAKKAD SAL+SLIDAADGRDL+A+DEDGRTALLFVAGLGSE CVR+LAE G N+DHRD
Sbjct: 121 TAAKKADESALKSLIDAADGRDLDAVDEDGRTALLFVAGLGSEACVRMLAEGGANVDHRD 180

Query: 183 NSGGFTALHMAAGYVKPGTVELLVQLGADPEVEDEKGRTALDLAREILKATPRIQLARRL 242
           NSGGFTALHMAAGYVKPG VE L+ LGA PEVEDEKGRTAL+LAREILKATPRIQ  RR+
Sbjct: 181 NSGGFTALHMAAGYVKPGAVEQLLDLGAYPEVEDEKGRTALELAREILKATPRIQFGRRM 240

Query: 243 GMERVIGALERVVFEYAEVEALLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAADLVADF 302
           G+ERV+GALE+ VFEYAEVEALLEKRGKGENLEYLVKWKDGEDNEWVK GLIAADLVADF
Sbjct: 241 GLERVVGALEKAVFEYAEVEALLEKRGKGENLEYLVKWKDGEDNEWVKAGLIAADLVADF 300

Query: 303 EAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPETNVDSDLVREFED--AQNNN 358
           EAGLEYAVAEAV GKR+GDDGKMEYLVKWTDI+DATWEP  NVD DL++EFED  AQ++N
Sbjct: 301 EAGLEYAVAEAVAGKRMGDDGKMEYLVKWTDIEDATWEPLDNVDPDLIKEFEDAQAQSSN 360

[Close]

BLAST of Lag0001313 vs. TAIR 10
Match: AT2G47450.1 (chloroplast signal recognition particle component (CAO) )

HSP 1 Score: 387.9 bits (995), Expect = 9.4e-108
Identity = 216/371 (58.22%), Postives = 266/371 (71.70%), Query Frame = 0


Query: 1   MAMD--ALFLNQSLSPKTPLPKLPSPTIPHLHLHLHLHLRRTFKRFS-------SHAHRL 60
           +AMD  AL ++QSLS     P   S +         L +RR    F           +  
Sbjct: 6   LAMDTCALVIHQSLSRIKLSPPKSSSSSSSAFSPESLPIRRIELCFRGAICAAVQRNYEE 65

Query: 61  TQHSHKPPEDDD----SYGEVDGIIASRVLLDASGMEYLIKWKDGHSPSWLPSDFIARDV 120
           T  S +  E+DD    SYGEV+ II SR   + + MEYLI+WKDGHSPSW+PS +IA DV
Sbjct: 66  TTSSVEEAEEDDESSSSYGEVNKIIGSRTAGEGA-MEYLIEWKDGHSPSWVPSSYIAADV 125

Query: 121 VAEYETPWWTAAKKADPSALQSLIDAADGRDLNAIDEDGRTALLFVAGLGSEPCVRLLAE 180
           V+EYETPWWTAA+KAD  AL  L+   + RD++A+DE+GRTALLFVAGLGS+ CVRLLAE
Sbjct: 126 VSEYETPWWTAARKADEQALSQLL---EDRDVDAVDENGRTALLFVAGLGSDKCVRLLAE 185

Query: 181 AGVNLDHRDNSGGFTALHMAAGYVKPGTVELLVQLGADPEVEDEKGRTALDLAREILKAT 240
           AG +LDHRD  GG TALHMAAGYV+P  VE LV+LGAD EVEDE+G TAL+LAREILK T
Sbjct: 186 AGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTT 245

Query: 241 PR---IQLARRLGMERVIGALERVVFEYAEVEALLEKRGKGENLEYLVKWKDGEDNEWVK 300
           P+   +Q  RR+G+E+VI  LE  VFEYAEV+ ++EKRGKG+++EYLV+WKDG D EWVK
Sbjct: 246 PKGNPMQFGRRIGLEKVINVLEGQVFEYAEVDEIVEKRGKGKDVEYLVRWKDGGDCEWVK 305

Query: 301 VGLIAADLVADFEAGLEYAVAEAVVGKRVGDDGK-MEYLVKWTDIQDATWEPETNVDSDL 355
              +A D+  D+E GLEYAVAE+V+GKRVGDDGK +EYLVKWTD+ DATWEP+ NVDS L
Sbjct: 306 GVHVAEDVAKDYEDGLEYAVAESVIGKRVGDDGKTIEYLVKWTDMSDATWEPQDNVDSTL 365

[Close]

BLAST of Lag0001313 vs. TAIR 10
Match: AT5G09410.1 (ethylene induced calmodulin binding protein )

HSP 1 Score: 64.7 bits (156), Expect = 1.8e-10
Identity = 40/92 (43.48%), Postives = 56/92 (60.87%), Query Frame = 0


Query: 135 DGRDLNAIDEDGRTALLFVAGLGSEPCVRLLAEAGVNLDHRDNSGGFTALHMAAGYVKPG 194
           +G+  N +DEDG+  L FVA LG +  ++ +  AGVN++ RD + G++ALH AA   +  
Sbjct: 584 EGKGPNILDEDGQGILHFVAALGYDWAIKPVLAAGVNINFRD-ANGWSALHWAAFSGREE 643

Query: 195 TVELLVQLGA------DPEVEDEKGRTALDLA 221
           TV +LV LGA      DP  E   G+TA DLA
Sbjct: 644 TVAVLVSLGADAGALTDPSPELPLGKTAADLA 674

[Close]

BLAST of Lag0001313 vs. TAIR 10
Match: AT5G09410.2 (ethylene induced calmodulin binding protein )

HSP 1 Score: 64.7 bits (156), Expect = 1.8e-10
Identity = 40/92 (43.48%), Postives = 56/92 (60.87%), Query Frame = 0


Query: 135 DGRDLNAIDEDGRTALLFVAGLGSEPCVRLLAEAGVNLDHRDNSGGFTALHMAAGYVKPG 194
           +G+  N +DEDG+  L FVA LG +  ++ +  AGVN++ RD + G++ALH AA   +  
Sbjct: 602 EGKGPNILDEDGQGILHFVAALGYDWAIKPVLAAGVNINFRD-ANGWSALHWAAFSGREE 661

Query: 195 TVELLVQLGA------DPEVEDEKGRTALDLA 221
           TV +LV LGA      DP  E   G+TA DLA
Sbjct: 662 TVAVLVSLGADAGALTDPSPELPLGKTAADLA 692

[Close]

BLAST of Lag0001313 vs. TAIR 10
Match: AT5G09410.3 (ethylene induced calmodulin binding protein )

HSP 1 Score: 64.7 bits (156), Expect = 1.8e-10
Identity = 40/92 (43.48%), Postives = 56/92 (60.87%), Query Frame = 0


Query: 135 DGRDLNAIDEDGRTALLFVAGLGSEPCVRLLAEAGVNLDHRDNSGGFTALHMAAGYVKPG 194
           +G+  N +DEDG+  L FVA LG +  ++ +  AGVN++ RD + G++ALH AA   +  
Sbjct: 661 EGKGPNILDEDGQGILHFVAALGYDWAIKPVLAAGVNINFRD-ANGWSALHWAAFSGREE 720

Query: 195 TVELLVQLGA------DPEVEDEKGRTALDLA 221
           TV +LV LGA      DP  E   G+TA DLA
Sbjct: 721 TVAVLVSLGADAGALTDPSPELPLGKTAADLA 751

[Close]

BLAST of Lag0001313 vs. TAIR 10
Match: AT2G17390.1 (ankyrin repeat-containing 2B )

HSP 1 Score: 55.8 bits (133), Expect = 8.5e-08
Identity = 32/88 (36.36%), Postives = 48/88 (54.55%), Query Frame = 0


Query: 134 ADGRDLNAIDEDGRTALLFVAGLGSEPCVRLLAEAGVNLDHRDNSGGFTALHMAAGYVKP 193
           A G + +  D +GRTAL F  G G   C ++L +AG N +  D +   T LH AAGY + 
Sbjct: 241 ASGGNKDEEDSEGRTALHFACGYGEVRCAQVLLDAGANANAIDKNKN-TPLHYAAGYGRK 300

Query: 194 GTVELLVQLGADPEVEDEKGRTALDLAR 222
             V LL++ GA    ++   +  +D+AR
Sbjct: 301 ECVSLLLENGAAVTQQNMDNKNPIDVAR 327

The following BLAST results are available for this feature:

BLAST of Lag0001313 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023529738.1	3.3e-163	78.96	signal recognition particle 43 kDa protein, chloroplastic-like [Cucurbita pepo s...	[more]
XP_022928488.1	2.8e-162	78.24	signal recognition particle 43 kDa protein, chloroplastic-like [Cucurbita moscha...	[more]
XP_022989400.1	6.2e-162	77.98	signal recognition particle 43 kDa protein, chloroplastic [Cucurbita maxima]	[more]
KAG6589032.1	1.1e-161	78.18	Signal recognition particle 43 kDa protein, chloroplastic, partial [Cucurbita ar...	[more]
XP_038888741.1	5.1e-156	76.50	signal recognition particle 43 kDa protein, chloroplastic [Benincasa hispida]	[more]

BLAST of Lag0001313 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22265	1.3e-106	58.22	Signal recognition particle 43 kDa protein, chloroplastic OS=Arabidopsis thalian...	[more]
Q8LSQ2	7.6e-86	46.92	Probable signal recognition particle 43 kDa protein, chloroplastic OS=Oryza sati...	[more]
Q8Q0U0	8.0e-11	39.62	Putative ankyrin repeat protein MM_0045 OS=Methanosarcina mazei (strain ATCC BAA...	[more]
Q06527	5.2e-10	42.59	Ankyrin homolog OS=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 10...	[more]
Q9FY74	2.6e-09	43.48	Calmodulin-binding transcription activator 1 OS=Arabidopsis thaliana OX=3702 GN=...	[more]

BLAST of Lag0001313 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EP65	1.4e-162	78.24	signal recognition particle 43 kDa protein, chloroplastic-like OS=Cucurbita mosc...	[more]
A0A6J1JM92	3.0e-162	77.98	signal recognition particle 43 kDa protein, chloroplastic OS=Cucurbita maxima OX...	[more]
A0A1S3BHX6	1.7e-152	76.55	signal recognition particle 43 kDa protein, chloroplastic OS=Cucumis melo OX=365...	[more]
A0A0A0K634	2.0e-150	77.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G018780 PE=4 SV=1	[more]
A0A6J1C248	1.2e-147	75.76	signal recognition particle 43 kDa protein, chloroplastic OS=Momordica charantia...	[more]

BLAST of Lag0001313 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47450.1	9.4e-108	58.22	chloroplast signal recognition particle component (CAO)	[more]
AT5G09410.1	1.8e-10	43.48	ethylene induced calmodulin binding protein	[more]
AT5G09410.2	1.8e-10	43.48	ethylene induced calmodulin binding protein	[more]
AT5G09410.3	1.8e-10	43.48	ethylene induced calmodulin binding protein	[more]
AT2G17390.1	8.5e-08	36.36	ankyrin repeat-containing 2B	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 179..208 e-value: 0.0044 score: 26.2 coord: 110..141 e-value: 520.0 score: 7.1 coord: 145..174 e-value: 8.6 score: 15.3
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 145..177 score: 10.04513
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 179..211 score: 11.16695
IPR000953	Chromo/chromo shadow domain	SMART	SM00298	chromo_7	coord: 302..352 e-value: 5.7E-8 score: 42.5 coord: 251..301 e-value: 1.3E-7 score: 41.3 coord: 64..116 e-value: 0.0085 score: 25.3
IPR000953	Chromo/chromo shadow domain	PROSITE	PS50013	CHROMO_2	coord: 253..282 score: 8.557401
IPR000953	Chromo/chromo shadow domain	PROSITE	PS50013	CHROMO_2	coord: 303..339 score: 11.3086
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 110..248 e-value: 2.4E-35 score: 123.1
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 111..222
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 118..210 e-value: 6.6E-10 score: 39.5
None	No IPR available	GENE3D	2.40.50.40		coord: 63..109 e-value: 7.1E-14 score: 53.0 coord: 249..298 e-value: 3.7E-18 score: 66.8
None	No IPR available	GENE3D	2.40.50.40		coord: 299..351 e-value: 4.3E-26 score: 92.3
None	No IPR available	PANTHER	PTHR24128	HOMEOBOX PROTEIN WARIAI	coord: 3..364
None	No IPR available	PROSITE	PS50297	ANK_REP_REGION	coord: 145..177 score: 8.693567
None	No IPR available	PROSITE	PS50297	ANK_REP_REGION	coord: 179..211 score: 9.807884
None	No IPR available	CDD	cd18628	CD3_cpSRP43_like	coord: 300..348 e-value: 6.41336E-12 score: 58.1616
IPR023780	Chromo domain	PFAM	PF00385	Chromo	coord: 305..349 e-value: 2.5E-8 score: 33.7
IPR030300	Signal recognition particle 43kDa protein	PANTHER	PTHR24128:SF43	SIGNAL RECOGNITION PARTICLE 43 KDA PROTEIN, CHLOROPLASTIC	coord: 3..364
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 251..298
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 305..351
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 61..115

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0001313.1	Lag0001313.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070208	protein heterotrimerization
biological_process	GO:0045038	protein import into chloroplast thylakoid membrane
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0009416	response to light stimulus
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0080085	signal recognition particle, chloroplast targeting
molecular_function	GO:0097718	disordered domain specific binding
molecular_function	GO:0042802	identical protein binding
molecular_function	GO:0030674	protein-macromolecule adaptor activity
molecular_function	GO:0005515	protein binding