Lag0001302 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATCAATTCTAGCAAGTTGAAACTAATTTTTGAATGTTGGGTTTTGCAGGACGGTGCCCTTGTGTCAACTGACATGAGAAGAAGAAAGAATGGGGCAATTTGGGAAGCGGATTCAGTGCCTGAAGGGCAACTGAACTTCCAAATAAGGTTAATTTCAAGTGATGTCATTTTTTTCACATTGCAAGATCTTCCTCAAGATTGGAAACTTGGCGCGATTTATGATACTGGAATTCAAATTGGTCGTAACATTCCCGAAGGGCAAGAGAGTTGTAGTCCATGTGTTGGAGGGCATTGGAACTGA ATGATCAATTCTAGCAAGTTGAAACTAATTTTTGAATGTTGGGTTTTGCAGGACGGTGCCCTTGTGTCAACTGACATGAGAAGAAGAAAGAATGGGGCAATTTGGGAAGCGGATTCAGTGCCTGAAGGGCAACTGAACTTCCAAATAAGGTTAATTTCAAGTGATGTCATTTTTTTCACATTGCAAGATCTTCCTCAAGATTGGAAACTTGGCGCGATTTATGATACTGGAATTCAAATTGGTCGTAACATTCCCGAAGGGCAAGAGAGTTGTAGTCCATGTGTTGGAGGGCATTGGAACTGA ATGATCAATTCTAGCAAGTTGAAACTAATTTTTGAATGTTGGGTTTTGCAGGACGGTGCCCTTGTGTCAACTGACATGAGAAGAAGAAAGAATGGGGCAATTTGGGAAGCGGATTCAGTGCCTGAAGGGCAACTGAACTTCCAAATAAGGTTAATTTCAAGTGATGTCATTTTTTTCACATTGCAAGATCTTCCTCAAGATTGGAAACTTGGCGCGATTTATGATACTGGAATTCAAATTGGTCGTAACATTCCCGAAGGGCAAGAGAGTTGTAGTCCATGTGTTGGAGGGCATTGGAACTGA MINSSKLKLIFECWVLQDGALVSTDMRRRKNGAIWEADSVPEGQLNFQIRLISSDVIFFTLQDLPQDWKLGAIYDTGIQIGRNIPEGQESCSPCVGGHWN Homology
BLAST of Lag0001302 vs. NCBI nr
Match: XP_038888869.1 (expansin-like A3 [Benincasa hispida]) HSP 1 Score: 75.5 bits (184), Expect = 2.9e-10 Identity = 37/76 (48.68%), Postives = 49/76 (64.47%), Query Frame = 0
BLAST of Lag0001302 vs. NCBI nr
Match: XP_022928449.1 (expansin-like A2 isoform X1 [Cucurbita moschata]) HSP 1 Score: 73.6 bits (179), Expect = 1.1e-09 Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = 0
BLAST of Lag0001302 vs. NCBI nr
Match: XP_023529769.1 (expansin-like A2 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 73.6 bits (179), Expect = 1.1e-09 Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = 0
BLAST of Lag0001302 vs. NCBI nr
Match: KAG7022750.1 (Expansin-like A3, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 73.6 bits (179), Expect = 1.1e-09 Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = 0
BLAST of Lag0001302 vs. NCBI nr
Match: XP_022135692.1 (expansin-like A2 [Momordica charantia]) HSP 1 Score: 72.0 bits (175), Expect = 3.3e-09 Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = 0
BLAST of Lag0001302 vs. ExPASy Swiss-Prot
Match: Q9LZT4 (Expansin-like A1 OS=Arabidopsis thaliana OX=3702 GN=EXLA1 PE=2 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 6.4e-08 Identity = 28/88 (31.82%), Postives = 42/88 (47.73%), Query Frame = 0
BLAST of Lag0001302 vs. ExPASy Swiss-Prot
Match: Q10S70 (Expansin-like A1 OS=Oryza sativa subsp. japonica OX=39947 GN=EXLA1 PE=2 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 1.1e-04 Identity = 25/76 (32.89%), Postives = 37/76 (48.68%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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