Lag0001288 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0001288
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Unknown protein
Location	chr4: 28555248 .. 28557921 (-)
RNA-Seq Expression	Lag0001288
Synteny	Lag0001288

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAGGTGGAGAATAACGAGGTCAAAGATAATGCGGCTGAAAAAAGAACAAAGAAAATTCGTGATAAGAAGGTGAAGAGAGAAGGAAAGGTTGGCAAGAGAAAAAATTGAAATGGAGAAGAAGAGAGAAAAGGAAGAAGAAGAAAAAAGAAAAAGAGAAGAAAAAGAAGAAGAAAAAATAGAAAGAGAAGAAAAGGAAGAAGAACAAATAAAAAGAAAAGAAGAAGAAAAGAATGAAAAAGAAAAAGAAAGGATATCAATCTTAGAACATGATATCAAATATTTGAAGGAATGAAAAAAGGAACTAAAAAATGGTCAAAAAGAGATTCTGAGATTGTTAAATAATTTGGTGGAAATTGTCACGGACAAATTTCCACCAAAAGATATTTCTAAGAAACAATCTCAAGAATCTCTTCTAAAAAATTGTTCTCCAATTTCTAATCTCGAAGAACTAAAATTTATAAATGCAGTTGAACAATTTGTAAATGTTGTTGAAAATGTTGTAAAAAAAAAAGTAAATTCTGTCACTGATAGAACTTCTATCAAAGATAGAATCTATAAATGATAGAACTCTATCAGTGATAAAATCTATGACTCATACATTTTTATCTTCACTCTTTTTTTGTTTGTGTTTATCAATAATGGAGGAGGTTGAAAATAACGAGATCAAAGATAATGCGGCTGAAAAAAGAACAAAGAAAATTCATGATAAGAAGGTGAAGAGAGAGAAGGAAAGGTTGGCAAGAGAAAAAATTGGAATGAAAAAGAAGAGATAAAAGGAAGAAGAAAAAAGAAAAAAGAAGAAAAGGAAGAAGAAGAAAAAATAAAAAGAGAAGAAGAAGAAAATATAAAAGAAAAAATAGAAGAAAATAAGAATGAAAAAGAAAAATATAGGATATCAATCTTAGAAAACGATATCAAATATTTGAAGGAATGACAAAAGGAACTAAAAAATGGCCAAAAATAGATTATGAGATTGTTAAATTATTTGGTGGAAATTATCACAGACAAATTTTCACCAAAAGATATTTCTGAAATACAATCTCAGGAATCTCTTCACAAAAATTGTCCTCAAACTTCTAGTCTCGAAAAACTTTAATTTATAAATGCAGTTGAGCCATTTGTAAATGCTGTTAAAAATATTGTCAATGTAAAAAACCACATTGACAACATTGGCAGGATTGTTGATTATGCAACTTTATATGCTGCTACTAGAGAAAAAGAGGTAAAGTTATCATGTTTTAAAAAATTAGTTTTTTCATATCGATATATTATTCTCATTAATTTTTATTGTTCTCATTTCAGATAGAAGATGAGGAGGATGATGAACGAGAAGAAAAAGAAAAAGAAAAGGAGAAAGAAAAAGAAGAAAAAGAAAATGAAGAAGAGAAGGAAAATGAAGATGAAATGGATGAAGAAGAAAAAGAAGAAGAAAATGAAAGACATCAACACGTAAAAAATAAAGGAAAGTAAATTCTATCACTGATAGAACTTCTATCAATGATAGAATCTATCACTGATATGATAAAATCTATGACACATACATTTTTATCTTCACTGTTTTTTTGTTTGTGTTTATCAATAATAATAGAGGAGGTGGAGAATAACGAGAACGAAGATAATGCGGCTGAAAAAAGAACAAAGAAAATTCTCGATAAGAAGGTGAAGAGAGAGAAGGAAAGGTTGACAAAAGAAAAAATTGAAATGGAAAAGAAAAGAGAGAAGGAAGAAGAAGCAAAAAGAAAAAGAGAAGAAAAAGAAAAAAAAAAGAAGAAAAAAAGAATGAAAAAGAAAAAAAAAATGATATCAATCTTAGAAGATGATATCAAATATTTGAAGGAAGGACAAAAGGAACTAAAAAATGACCAAAAAGAGATTATGAGATTATTAAATAATTTGGTGGAAATTGTCCCAGATAAATTTCTACCAAAAGATATTTCTGAAAAACTATCTTAAGAATCTTTTCACAAAAATTGTCTTACTTCTAGTCTCGAAAATCTAGAATTTATACATGCAGCTGAACAATTTGTAGATGCTGCTGAAAATATTGTCAAAGCAGAAGACCACATTGACAACATTGGCAGGATTGTTGATTATGCAACCTTATATGCTGCTACTAGAGAAAAAGAGGTAAAGTTATCATGTTTTTAAAAATCAGTTTTTTTCATATCAATATATTATTCTCACTAATTTTTATTGTTCTCATTTCAGATAGAAGATGAGGAGGATGATGGACAAGAAGAAGAAGAAAAACAAAAAGAGAAAGAAAATGAAGAAGATAAGGAAAATGAAGATGAAATGGATGAAGAAGAAAAAGTAAATTCTATCTTTGATAGAACTTCTATCAATGATAGAATCTATCACTGATAGAACTCTATCAGTGATAAAATCTATCACTCATACATTTTTATCTTTACTGTTTTTTTTTTGGTGTTTATCAGTAATGAAGGAGGTGGAGAATAACGAGAACGAAGATAATGTGACTGAAAAAAGAACAAAGAAAATTCATGATAAAAAGGTGAATTTGGTTTTTTTTTTTTTAGGAGGGGGGCTTAATAGTCTGATATTAATATATTTTATTTGTTATCTGCAGGATGTTGAACCAAGAAAATATAGGCCTAAAGTGGATTTCAGAAAGCAACCAGAAGGCCGACCAAAACGACAACCATAG

mRNA sequence

ATGGAGGAGGTGGAGAATAACGAGGTCAAAGATAATGCGGCTGAAAAAAGAACAAAGAAAATTCGTGATAAGAAGGTGAAGAGAGAAGGAAAGATAGAAGATGAGGAGGATGATGAACGAGAAGAAAAAGAAAAAGAAAAGGAGAAAGAAAAAGAAGAAAAAGAAAATGAAGAAGAGAAGGAAAATGAAGATGAAATGGATGAAGAAGAAAAAGAAGAAGAAAATGAAAGACATCAACACGTAAAAAATAAAGGAAATCTCGAAAATCTAGAATTTATACATGCAGCTGAACAATTTGTAGATGCTGCTGAAAATATTGTCAAAGCAGAAGACCACATTGACAACATTGGCAGGATTGTTGATTATGCAACCTTATATGCTGCTACTAGAGAAAAAGAGATAGAAGATGAGGAGGATGATGGACAAGAAGAAGAAGAAAAACAAAAAGAGAAAGAAAATGAAGAAGATAAGGAAAATGAAGATGAAATGGATGAAGAAGAAAAAGATGTTGAACCAAGAAAATATAGGCCTAAAGTGGATTTCAGAAAGCAACCAGAAGGCCGACCAAAACGACAACCATAG

Coding sequence (CDS)

ATGGAGGAGGTGGAGAATAACGAGGTCAAAGATAATGCGGCTGAAAAAAGAACAAAGAAAATTCGTGATAAGAAGGTGAAGAGAGAAGGAAAGATAGAAGATGAGGAGGATGATGAACGAGAAGAAAAAGAAAAAGAAAAGGAGAAAGAAAAAGAAGAAAAAGAAAATGAAGAAGAGAAGGAAAATGAAGATGAAATGGATGAAGAAGAAAAAGAAGAAGAAAATGAAAGACATCAACACGTAAAAAATAAAGGAAATCTCGAAAATCTAGAATTTATACATGCAGCTGAACAATTTGTAGATGCTGCTGAAAATATTGTCAAAGCAGAAGACCACATTGACAACATTGGCAGGATTGTTGATTATGCAACCTTATATGCTGCTACTAGAGAAAAAGAGATAGAAGATGAGGAGGATGATGGACAAGAAGAAGAAGAAAAACAAAAAGAGAAAGAAAATGAAGAAGATAAGGAAAATGAAGATGAAATGGATGAAGAAGAAAAAGATGTTGAACCAAGAAAATATAGGCCTAAAGTGGATTTCAGAAAGCAACCAGAAGGCCGACCAAAACGACAACCATAG

Protein sequence

MEEVENNEVKDNAAEKRTKKIRDKKVKREGKIEDEEDDEREEKEKEKEKEKEEKENEEEKENEDEMDEEEKEEENERHQHVKNKGNLENLEFIHAAEQFVDAAENIVKAEDHIDNIGRIVDYATLYAATREKEIEDEEDDGQEEEEKQKEKENEEDKENEDEMDEEEKDVEPRKYRPKVDFRKQPEGRPKRQP

Homology

The following BLAST results are available for this feature:

BLAST of Lag0001288 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0001288 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 32..79
None	No IPR available	COILS	Coil	Coil	coord: 127..169
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..193
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 168..193
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..72

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0001288.1	Lag0001288.1	mRNA