Lag0001280 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTATGAGTATGTGTGTGTATATATACATATATACACATGTATGTGTATTTGTGTGTATATATACACATGTATTTATATACATGTATGTGTACGTGTATGAGTATCACCTATCCCTGATGCTAATATTAGAAGCCGGTGGATTTCGAGTTACCTGGAAGATTTCCTGAAGGCTAATCAGAAATATGTTCCTCATGCGATTTCCTCTTCCAAGCAGAGGCGACCTCCGTTGAATACGAATCAAGGAGCCTCCCCTTCTCAGCAAATCAGACCTTTTTTGAGTAATCGATGGTTGCCTCCTCCATGCAATACTCGGAAGTTAAACTCTGATATTTCTAGGGTTTCGTCTCCCTCTTCGATTGGAGTCGGTTTGATTATTCGAGATTGGGAAAGGAGTATCAGAGCCGCTGCAAGTCTTTTTGTGGATTTCAATTTTGAGACTCATTTGGCTGAGATTTGGGCTATTTTGGAAGGCTTAAAGTGGGCCTTATCCCTAGGCTATATGAGGCTTATTGTGGAGTTTGATAGCTATTGA ATGTATGAAAGCCGGTGGATTTCGAGTTACCTGGAAGATTTCCTGAAGGCTAATCAGAAATATGTTCCTCATGCGATTTCCTCTTCCAAGCAGAGGCGACCTCCGTTGAATACGAATCAAGGAGCCTCCCCTTCTCAGCAAATCAGACCTTTTTTGAGTAATCGATGGTTGCCTCCTCCATGCAATACTCGGAAGTTAAACTCTGATATTTCTAGGGTTTCGTCTCCCTCTTCGATTGGAGTCGGTTTGATTATTCGAGATTGGGAAAGGAGTATCAGAGCCGCTGCAAGTCTTTTTGTGGATTTCAATTTTGAGACTCATTTGGCTGAGATTTGGGCTATTTTGGAAGGCTTAAAGTGGGCCTTATCCCTAGGCTATATGAGGCTTATTGTGGAGTTTGATAGCTATTGA ATGTATGAAAGCCGGTGGATTTCGAGTTACCTGGAAGATTTCCTGAAGGCTAATCAGAAATATGTTCCTCATGCGATTTCCTCTTCCAAGCAGAGGCGACCTCCGTTGAATACGAATCAAGGAGCCTCCCCTTCTCAGCAAATCAGACCTTTTTTGAGTAATCGATGGTTGCCTCCTCCATGCAATACTCGGAAGTTAAACTCTGATATTTCTAGGGTTTCGTCTCCCTCTTCGATTGGAGTCGGTTTGATTATTCGAGATTGGGAAAGGAGTATCAGAGCCGCTGCAAGTCTTTTTGTGGATTTCAATTTTGAGACTCATTTGGCTGAGATTTGGGCTATTTTGGAAGGCTTAAAGTGGGCCTTATCCCTAGGCTATATGAGGCTTATTGTGGAGTTTGATAGCTATTGA MYESRWISSYLEDFLKANQKYVPHAISSSKQRRPPLNTNQGASPSQQIRPFLSNRWLPPPCNTRKLNSDISRVSSPSSIGVGLIIRDWERSIRAAASLFVDFNFETHLAEIWAILEGLKWALSLGYMRLIVEFDSY Homology
BLAST of Lag0001280 vs. NCBI nr
Match: XP_022131661.1 (uncharacterized protein LOC111004786 [Momordica charantia]) HSP 1 Score: 69.7 bits (169), Expect = 2.2e-08 Identity = 49/129 (37.98%), Postives = 64/129 (49.61%), Query Frame = 0
BLAST of Lag0001280 vs. NCBI nr
Match: XP_030495196.1 (uncharacterized protein LOC115710989 [Cannabis sativa]) HSP 1 Score: 65.5 bits (158), Expect = 4.1e-07 Identity = 44/126 (34.92%), Postives = 61/126 (48.41%), Query Frame = 0
BLAST of Lag0001280 vs. NCBI nr
Match: KAA3466619.1 (reverse transcriptase [Gossypium australe]) HSP 1 Score: 64.3 bits (155), Expect = 9.2e-07 Identity = 32/83 (38.55%), Postives = 48/83 (57.83%), Query Frame = 0
BLAST of Lag0001280 vs. NCBI nr
Match: XP_040967151.1 (uncharacterized protein LOC107961535 isoform X1 [Gossypium hirsutum]) HSP 1 Score: 63.5 bits (153), Expect = 1.6e-06 Identity = 31/83 (37.35%), Postives = 48/83 (57.83%), Query Frame = 0
BLAST of Lag0001280 vs. NCBI nr
Match: XP_016753135.1 (uncharacterized protein LOC107961535 isoform X2 [Gossypium hirsutum]) HSP 1 Score: 63.5 bits (153), Expect = 1.6e-06 Identity = 31/83 (37.35%), Postives = 48/83 (57.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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