Lag0001254 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0001254
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionReverse transcriptase domain-containing protein
Locationchr4: 28029439 .. 28031876 (+)
RNA-Seq ExpressionLag0001254
SyntenyLag0001254
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCAGAAGTCATTTGGAGGACGTTTAAAGCTACTTGGAAACTAGAGCGGGGGCTACAAGTCGAGACGTTGGGTAAGAATATTTTCATTTTCAGACTCACGGTGGAAGAGGATAGGACGAGGGTTGTGAGACAGAGCCCCTGCCATTTTGATAAATTTCTTTTGGTGTTAGAGTTCCCGATCAGGTCACAAAAGCCATCGGATTATAAATTTTTGTTCTCGGCTTTTTGGATTCATGTATATGACCTTCCATTAGATTGGTACAATGACGTCATGGTAGAGCGAATAGGAAATGCCATTGGTATTTATGAAGAAGTGGATAGCCGAAACGGCTACCATTTTTGGGGAGCAAGCTTGTGAACCCGTGTGAGGATTGACATCTCTCGTCCTCTCCAGCGTAGAATCAAAATCAATATTGATGGTCCAGGGGAAGGAAGCTGGATACTAATCTATTACGAGAAATTGCTCGAATTTTGTGCCCATTGTGGAATTATTGGTCATCCTATGAAGGATTGTAGTCTCTTCTATAGAACAAAGAAATAACCCAATTCACTTCCTCAATATGGTGATTGGCTTCGATATAACGGCAAGGGCGATGTAATGGCCAGATCTCCGGCGAGGGACCAACCACGGGATTTCCATGATTTAGCAGTCCTAGCTCAACCTCTCTTGACAGAAACTTAGGTGGCCATGGATACTATGGAATATGAGGCTCCGATTGGTTCAATTGTGCAGCCGACTATGAAGTCACGACAACCTCCAATACCGGTCCAAGAGTCCCACCGATGACAAGCGGTCAATCTCAGTCCTGCCCACTACTCACTTTCCAACGAAACGATGTGATCCAGTAAGGGGAAAGAAAATGTATGTGAAATAGCGGTGAAATTTAGAGGAGGAAGCCAGCTCTAACTCGACCTTGGTTGGCGAAAAGTTTGGGTCCAACCAGGCTTCAGGAGAGTGTAACGTCTTTTGGGCCGCCATTAATAGCCCATGGGTTACAAATCCATCGATATTTAAGGCTCCCTCACCGAATAAATTATTCCATTTCATTTCAGGATCCACGAGCGAGAATTAGAGGATCAAAGATATTATTGCTCATTGTAACCGCCATTTATCACGGCAACTGTTGGAAATTTTCAACGGTGCAGATTCGAGGGGCGATTTACAGACTGTTGCAGATGTTTCCTTGAAGTCGAATCTGCCTAAGAAGGCGAAAGGGGATGGGTCCGATCCGTTGGCGAGTCAATGGTCGTCGGACTGTTCCTTGCCTGCGGCTGGCATTGGTGATAACGAGAAGAAGCAAAACCCCACAAGCGTTGTTATTGCTACTGAGAAGAAGCAAACAAAAAGATTCGGTTAAGGGCTACCACGGTCATGCATTCGAAGGAAGGAATCAGCAAAGGTCCTAAATGAAAGAAGCGTGCTTGTGCAGGTTATGTACCTATTGGGCTATCTGTGCAACGACTAGAGGAGTTCCAAAAGCGTAAGGATGGGCCAATAATGCTATCTTTTGATAACATAAAGTGTCCAAAGATGGAAGAGGAGTCTGATAAGGAGGCGGGGACTGTTGGACAACCTCGCTCAGATCCATGAAGATTATCTGTTGGAATGTTCGTGGGTTGGAGAGCCCATGGACATTCTAAAATGTAAGCGACGAATTATCGCGCTTAAATCCTCATCTATGTTTCCTTTCTGAGACTAAATGTTCGTCATTTCAATTGAATAAACTGAAAGCTCGTTTGCATTATTCCTGTTGTTTTGTGGTTAATAGAGTCGGGTTGAGTGGTGGTCTTTGCATGTTATGGAAAGATGAAGTGAATGTTTGTATCAGAAATTACACTATCCATCATACCGACGCAAATATAATTTGGCAAGATAAACAATGGCGATTCACCGGTTTATATGGATAACCTGATTCTTGTTTGAGATCATAGACCTGGCAACTCATATGCCGCTTACATAATTTTTGTGATGATGCATGGGTTATTGGAGGTGATCTTAATGAGATTCTTTGGGACAATGAGAATTCAAAAGGTCCTACTCGGGACCATCGCCTGATGACGAATTTTAGGGAGGTCTTGGATGGCTGCAATCTCATGGATTTGGGCTTTTTAGGCAGCACTTATACTTGGTGCAATAGGAGAGAAGATGGTGATCAAGTGAGCTTACGCCTAGATCGTTTTATTGGAAACTCTAATTTCTGTTCTTTGTTTCCAAATCACCTGGTTCTGCATCAAGATTGGGCAAAATCGGACCATCGTCCAATTGAACTGAACTTACTAGGCTCGCACTTCAGTAGCAGCCCAAGAAGAGGAAACCTATCCTTTAAATTTGAGGAATGGTGGACGCACCATGTAGAGTGCAAGGAAATTATTGCTCGAGCTAGGGTTGGGGTTGTAGAGGAGCGAAGTCTGCAACCTACAAAACCGACTTAA

mRNA sequence

ATGGCTGCAGAAGTCATTTGGAGGACGTTTAAAGCTACTTGGAAACTAGAGCGGGGGCTACAAGTCGAGACGTTGGGTAAGAATATTTTCATTTTCAGACTCACGGTGGAAGAGGATAGGACGAGGGTTGTGAGACAGAGCCCCTGCCATTTTGATAAATTTCTTTTGGTGTTAGAGTTCCCGATCAGGTCACAAAAGCCATCGGATTATAAATTTTTGTTCTCGGCTTTTTGGATTCATGTATATGACCTTCCATTAGATTGGTACAATGACGTCATGGTAGAGCGAATAGGAAATGCCATTGCCGACTATGAAGTCACGACAACCTCCAATACCGGTCCAAGAGTCCCACCGATGACAAGCGATTCGAGGGGCGATTTACAGACTGTTGCAGATGTTTCCTTGAAGTCGAATCTGCCTAAGAAGGCGAAAGGGGATGGGTCCGATCCGTTGGCGAGTCAATGGTCGTCGGACTGTTCCTTGCCTGCGGCTGGCATTGGTGATAACGAGAAGAAGCAAAACCCCACAAGCGTTGTTATTGCTACTGAGAAGAAGCAAACAAAAAGATTCGGTTATGTACCTATTGGGCTATCTGTGCAACGACTAGAGGAGTTCCAAAAGCGTAAGGATGGGCCAATAATGCTATCTTTTGATAACATAAAGTGTCCAAAGATGGAAGAGGAGTCTGATAAGGAGGCGGGGACTACCTGGCAACTCATATGCCGCTTACATAATTTTTGTGATGATGCATGGGTTATTGGAGGTGATCTTAATGAGATTCTTTGGGACAATGAGAATTCAAAAGGTCCTACTCGGGACCATCGCCTGATGACGAATTTTAGGGAGGTCTTGGATGGCTGCAATCTCATGGATTTGGGCTTTTTAGGCAGCACTTATACTTGGTGCAATAGGAGAGAAGATGGTGATCAAGTGAGCTTACGCCTAGATCGTTTTATTGGAAACTCTAATTTCTGTTCTTTGTTTCCAAATCACCTGGTTCTGCATCAAGATTGGGCAAAATCGGACCATCGTCCAATTGAACTGAACTTACTAGGCTCGCACTTCAGTAGCAGCCCAAGAAGAGGAAACCTATCCTTTAAATTTGAGGAATGGTGGACGCACCATGTAGAGTGCAAGGAAATTATTGCTCGAGCTAGGGTTGGGGTTGTAGAGGAGCGAAGTCTGCAACCTACAAAACCGACTTAA

Coding sequence (CDS)

ATGGCTGCAGAAGTCATTTGGAGGACGTTTAAAGCTACTTGGAAACTAGAGCGGGGGCTACAAGTCGAGACGTTGGGTAAGAATATTTTCATTTTCAGACTCACGGTGGAAGAGGATAGGACGAGGGTTGTGAGACAGAGCCCCTGCCATTTTGATAAATTTCTTTTGGTGTTAGAGTTCCCGATCAGGTCACAAAAGCCATCGGATTATAAATTTTTGTTCTCGGCTTTTTGGATTCATGTATATGACCTTCCATTAGATTGGTACAATGACGTCATGGTAGAGCGAATAGGAAATGCCATTGCCGACTATGAAGTCACGACAACCTCCAATACCGGTCCAAGAGTCCCACCGATGACAAGCGATTCGAGGGGCGATTTACAGACTGTTGCAGATGTTTCCTTGAAGTCGAATCTGCCTAAGAAGGCGAAAGGGGATGGGTCCGATCCGTTGGCGAGTCAATGGTCGTCGGACTGTTCCTTGCCTGCGGCTGGCATTGGTGATAACGAGAAGAAGCAAAACCCCACAAGCGTTGTTATTGCTACTGAGAAGAAGCAAACAAAAAGATTCGGTTATGTACCTATTGGGCTATCTGTGCAACGACTAGAGGAGTTCCAAAAGCGTAAGGATGGGCCAATAATGCTATCTTTTGATAACATAAAGTGTCCAAAGATGGAAGAGGAGTCTGATAAGGAGGCGGGGACTACCTGGCAACTCATATGCCGCTTACATAATTTTTGTGATGATGCATGGGTTATTGGAGGTGATCTTAATGAGATTCTTTGGGACAATGAGAATTCAAAAGGTCCTACTCGGGACCATCGCCTGATGACGAATTTTAGGGAGGTCTTGGATGGCTGCAATCTCATGGATTTGGGCTTTTTAGGCAGCACTTATACTTGGTGCAATAGGAGAGAAGATGGTGATCAAGTGAGCTTACGCCTAGATCGTTTTATTGGAAACTCTAATTTCTGTTCTTTGTTTCCAAATCACCTGGTTCTGCATCAAGATTGGGCAAAATCGGACCATCGTCCAATTGAACTGAACTTACTAGGCTCGCACTTCAGTAGCAGCCCAAGAAGAGGAAACCTATCCTTTAAATTTGAGGAATGGTGGACGCACCATGTAGAGTGCAAGGAAATTATTGCTCGAGCTAGGGTTGGGGTTGTAGAGGAGCGAAGTCTGCAACCTACAAAACCGACTTAA

Protein sequence

MAAEVIWRTFKATWKLERGLQVETLGKNIFIFRLTVEEDRTRVVRQSPCHFDKFLLVLEFPIRSQKPSDYKFLFSAFWIHVYDLPLDWYNDVMVERIGNAIADYEVTTTSNTGPRVPPMTSDSRGDLQTVADVSLKSNLPKKAKGDGSDPLASQWSSDCSLPAAGIGDNEKKQNPTSVVIATEKKQTKRFGYVPIGLSVQRLEEFQKRKDGPIMLSFDNIKCPKMEEESDKEAGTTWQLICRLHNFCDDAWVIGGDLNEILWDNENSKGPTRDHRLMTNFREVLDGCNLMDLGFLGSTYTWCNRREDGDQVSLRLDRFIGNSNFCSLFPNHLVLHQDWAKSDHRPIELNLLGSHFSSSPRRGNLSFKFEEWWTHHVECKEIIARARVGVVEERSLQPTKPT
Homology
BLAST of Lag0001254 vs. NCBI nr
Match: XP_027118730.1 (uncharacterized protein LOC113735973 [Coffea arabica])

HSP 1 Score: 142.5 bits (358), Expect = 7.9e-30
Identity = 115/410 (28.05%), Postives = 174/410 (42.44%), Query Frame = 0

Query: 3   AEVIWRTFKATWKLERGLQVETLGKNIFIFRLTVEEDRTRVVRQSPCHFDKFLLVLEFPI 62
           AE +  T K +W   +GL+   +G N+F+F+     D+ +V+   P  FD  LLV+   +
Sbjct: 52  AEAMMATMKKSWNPAKGLEYSAVGDNLFLFKFNDIVDKRKVMAGCPWAFDGSLLVVSDYV 111

Query: 63  RSQKPSDYKFLFSAFWIHVYDLPLDWYNDVMVERIGNAIADYE-------VTTTSNTGPR 122
            + +PS  K    +FW+ VY+LPL W N    + IG+ +  YE       ++       R
Sbjct: 112 GNIQPSKVKLDHCSFWVQVYNLPLGWMNGRTADFIGSKLGTYEGFDAKGGLSVGKFLRIR 171

Query: 123 VPPMTSDSRGDLQ------TVADVSLK-SNLPK---------KAKGDGSDPLASQWSSDC 182
           V    ++    L        V +V  +   LP            + D  D L    +SD 
Sbjct: 172 VKLNLNNPLKRLMKLLIEGAVCEVHFRYERLPTHCNFCGRIGHGERDCEDKLDVAKASD- 231

Query: 183 SLPAAGIGDNEKKQNP----TSVVIATEKKQTKRFGYVPIGLSVQRLEEFQKRKDGPIML 242
               + +G  +  Q P     S ++AT+++        PI LS   + +        +  
Sbjct: 232 --SPSLVGSPDPTQRPDVQIPSTLVATQRRPLSLDNDQPI-LSTALVTDSSPTAQVHMTD 291

Query: 243 SFDNIKCPKMEEESDKEAGTTWQLICRLHNFCDDAWVIGGDLNEILWDNENSKGPTRDHR 302
           S   +       E+ K    TW ++ +L   C   WV  GD NE+L   E      R   
Sbjct: 292 SSWRLTGFYGHPEATKRK-HTWDIMRKLSTLCCLPWVCMGDFNEVLTQEEFQGATWRPKW 351

Query: 303 LMTNFREVLDGCNLMDLGFLGSTYTWCNRREDGDQVSLRLDRFIGNSNFCSLFPNHLVLH 362
            + NFR+ L  CNL DLG  G+ +TWC  R   D    RLDR   + +F +LFP+  + H
Sbjct: 352 QIMNFRKALSDCNLFDLGHEGNRFTWCRNRSAPDTTRARLDRACVSHDFLTLFPDARIYH 411

Query: 363 QDWAKSDHRPIELNLLGSH---FSSSPRRGNLSFKFEEWWTHHVECKEII 383
                SDH PI L L   H    + S  R +  F FE  W    +C+ II
Sbjct: 412 SHALFSDHVPIVLRLSCLHDLFKARSKSRRDKRFMFEAMWIRSEDCERII 456

BLAST of Lag0001254 vs. NCBI nr
Match: XP_041011336.1 (uncharacterized protein LOC121255118 [Juglans microcarpa x Juglans regia])

HSP 1 Score: 133.3 bits (334), Expect = 4.8e-27
Identity = 68/161 (42.24%), Postives = 90/161 (55.90%), Query Frame = 0

Query: 236 TWQLICRLHNFCDDAWVIGGDLNEILWDNENSKGPTRDHRLMTNFREVLDGCNLMDLGFL 295
           TW LI  L    D  W++ GD NE+L + E S G  R    M +FR V+D C L+DLGF 
Sbjct: 76  TWDLIRSLKMPSDQGWLLMGDFNEVLSNQEKSGGRDRSDMQMQDFRVVVDECELLDLGFQ 135

Query: 296 GSTYTWCNRREDGDQVSLRLDRFIGNSNFCSLFPNHLVLHQDWAKSDHRPIELNLLGSHF 355
           G+ +TWCN RE    +S RLDR + N  + +LFP   V+H + A SDH PI+L L  + F
Sbjct: 136 GTPFTWCNNRETDHSISERLDRCLANLKWKALFPMVKVIHGNAAYSDHIPIKLQLQSNEF 195

Query: 356 SSSPRRGNLSFKFEEWWTHHVECKEIIARARVGVVEERSLQ 397
               R+G   F FE  W     C+EII  A V    ER+++
Sbjct: 196 L---RKGRKPFHFEAMWVEDKNCQEIIKIAWVDSAGERTME 233

BLAST of Lag0001254 vs. NCBI nr
Match: XP_030498017.1 (uncharacterized protein LOC115713672 [Cannabis sativa])

HSP 1 Score: 131.7 bits (330), Expect = 1.4e-26
Identity = 66/163 (40.49%), Postives = 90/163 (55.21%), Query Frame = 0

Query: 223 PKMEEESDKEAGTTWQLICRLHNFCDDAWVIGGDLNEILWDNENSKGPTRDHRLMTNFRE 282
           PK    +D     +W+L+CRL    D  W+ GGD NEIL  NE   G  R    +T F++
Sbjct: 91  PKASSTAD-----SWKLLCRLKGLFDLPWICGGDFNEILSINERKGGVDRSLSAITEFQQ 150

Query: 283 VLDGCNLMDLGFLGSTYTWCNRREDGDQVSLRLDRFIGNSNFCSLFPNHLVLHQDWAKSD 342
            LD C L+D+GF G  +TW N+R     V  RLDR+  N  + SLFP+  VL+ D+  SD
Sbjct: 151 ALDNCALVDMGFEGQCFTWLNKRHGAAHVQERLDRYFCNQEWNSLFPSVKVLNGDFIHSD 210

Query: 343 HRPIELNLLGSHFSSSPRRGNLSFKFEEWWTHHVECKEIIARA 386
           HRPI + +L +   S P     SF+FE  W    EC +I+ +A
Sbjct: 211 HRPI-VAVLENIVRSHPHDNKRSFRFETHWLKDAECHDIVTQA 247

BLAST of Lag0001254 vs. NCBI nr
Match: KAF5443558.1 (hypothetical protein F2P56_036105, partial [Juglans regia])

HSP 1 Score: 129.0 bits (323), Expect = 9.0e-26
Identity = 63/149 (42.28%), Postives = 82/149 (55.03%), Query Frame = 0

Query: 236 TWQLICRLHNFCDDAWVIGGDLNEILWDNENSKGPTRDHRLMTNFREVLDGCNLMDLGFL 295
           TW L+ RL++  D  W++GGD NE+L  NE   G  R    M  FR V+  C+L DLGF 
Sbjct: 117 TWNLLRRLNSGVDGPWLVGGDFNELLHFNEKRGGRPRSENQMEAFRNVIFDCSLRDLGFR 176

Query: 296 GSTYTWCNRREDGDQVSLRLDRFIGNSNFCSLFPNHLVLHQDWAKSDHRPIELNLLGSHF 355
           G  YTWCN R     +S RLDRF+GN+ FC+LFP  +V H   A SDH P+  +   S  
Sbjct: 177 GPKYTWCNGRAGSRAISERLDRFLGNNQFCALFPQFVVRHGMAAYSDHLPVWFD---SEE 236

Query: 356 SSSPRRGNLSFKFEEWWTHHVECKEIIAR 385
                +    F+FE  W    +C +II R
Sbjct: 237 LEKRNKAPKLFRFEAMWVGVEQCSQIINR 262

BLAST of Lag0001254 vs. NCBI nr
Match: XP_040987679.1 (uncharacterized protein LOC121235397 [Juglans microcarpa x Juglans regia])

HSP 1 Score: 129.0 bits (323), Expect = 9.0e-26
Identity = 64/161 (39.75%), Postives = 89/161 (55.28%), Query Frame = 0

Query: 236 TWQLICRLHNFCDDAWVIGGDLNEILWDNENSKGPTRDHRLMTNFREVLDGCNLMDLGFL 295
           TW LI  L    D  W++ GD NE+L ++E S G     R M  F+ V+D C LMDLGF 
Sbjct: 119 TWDLIRSLKLPQDQGWLLIGDFNEVLSNHEKSGGRESSDRQMQAFQAVVDECELMDLGFQ 178

Query: 296 GSTYTWCNRREDGDQVSLRLDRFIGNSNFCSLFPNHLVLHQDWAKSDHRPIELNLLGSHF 355
           G+ +TWCN RE    +S RLDR + +  + + FP   V+H     SDH PI+ ++   HF
Sbjct: 179 GNPFTWCNNRETDQCISERLDRCLASLKWKAFFPMAKVIHGTTTYSDHTPIKSHV---HF 238

Query: 356 SSSPRRGNLSFKFEEWWTHHVECKEIIARARVGVVEERSLQ 397
           +S  RRG   F+FE  W     C+E+I  A +    ER ++
Sbjct: 239 ASVQRRGKRPFRFEAMWVEDSSCQEVIKEAWLDSAGERRME 276

BLAST of Lag0001254 vs. ExPASy TrEMBL
Match: A0A6P6WTP1 (uncharacterized protein LOC113735973 OS=Coffea arabica OX=13443 GN=LOC113735973 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 3.8e-30
Identity = 115/410 (28.05%), Postives = 174/410 (42.44%), Query Frame = 0

Query: 3   AEVIWRTFKATWKLERGLQVETLGKNIFIFRLTVEEDRTRVVRQSPCHFDKFLLVLEFPI 62
           AE +  T K +W   +GL+   +G N+F+F+     D+ +V+   P  FD  LLV+   +
Sbjct: 52  AEAMMATMKKSWNPAKGLEYSAVGDNLFLFKFNDIVDKRKVMAGCPWAFDGSLLVVSDYV 111

Query: 63  RSQKPSDYKFLFSAFWIHVYDLPLDWYNDVMVERIGNAIADYE-------VTTTSNTGPR 122
            + +PS  K    +FW+ VY+LPL W N    + IG+ +  YE       ++       R
Sbjct: 112 GNIQPSKVKLDHCSFWVQVYNLPLGWMNGRTADFIGSKLGTYEGFDAKGGLSVGKFLRIR 171

Query: 123 VPPMTSDSRGDLQ------TVADVSLK-SNLPK---------KAKGDGSDPLASQWSSDC 182
           V    ++    L        V +V  +   LP            + D  D L    +SD 
Sbjct: 172 VKLNLNNPLKRLMKLLIEGAVCEVHFRYERLPTHCNFCGRIGHGERDCEDKLDVAKASD- 231

Query: 183 SLPAAGIGDNEKKQNP----TSVVIATEKKQTKRFGYVPIGLSVQRLEEFQKRKDGPIML 242
               + +G  +  Q P     S ++AT+++        PI LS   + +        +  
Sbjct: 232 --SPSLVGSPDPTQRPDVQIPSTLVATQRRPLSLDNDQPI-LSTALVTDSSPTAQVHMTD 291

Query: 243 SFDNIKCPKMEEESDKEAGTTWQLICRLHNFCDDAWVIGGDLNEILWDNENSKGPTRDHR 302
           S   +       E+ K    TW ++ +L   C   WV  GD NE+L   E      R   
Sbjct: 292 SSWRLTGFYGHPEATKRK-HTWDIMRKLSTLCCLPWVCMGDFNEVLTQEEFQGATWRPKW 351

Query: 303 LMTNFREVLDGCNLMDLGFLGSTYTWCNRREDGDQVSLRLDRFIGNSNFCSLFPNHLVLH 362
            + NFR+ L  CNL DLG  G+ +TWC  R   D    RLDR   + +F +LFP+  + H
Sbjct: 352 QIMNFRKALSDCNLFDLGHEGNRFTWCRNRSAPDTTRARLDRACVSHDFLTLFPDARIYH 411

Query: 363 QDWAKSDHRPIELNLLGSH---FSSSPRRGNLSFKFEEWWTHHVECKEII 383
                SDH PI L L   H    + S  R +  F FE  W    +C+ II
Sbjct: 412 SHALFSDHVPIVLRLSCLHDLFKARSKSRRDKRFMFEAMWIRSEDCERII 456

BLAST of Lag0001254 vs. ExPASy TrEMBL
Match: A0A2N9I0P4 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45471 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.2e-28
Identity = 115/427 (26.93%), Postives = 181/427 (42.39%), Query Frame = 0

Query: 4   EVIWRTFKATWKLERGLQVETLGKNIFIFRLTVEEDRTRVVRQSPCHFDKFLLVLEFPIR 63
           E I RTF+  W+ E+G  V+ LG N  +     + D  RV+   P  +DKFL+VL+    
Sbjct: 47  EAITRTFRPLWRAEKGFVVKDLGDNNALITFQDDVDLERVITNGPWSYDKFLVVLQRIED 106

Query: 64  SQKPSDYKFLFSAFWIHVYDLPLDWYNDVMVERIGN----------------AIADY--- 123
               +      + FW+ ++ LPL      M   IG+                A AD    
Sbjct: 107 DTPLASLSLNLAVFWVQIHGLPL----RCMKREIGSRRMSHRSRQANLLHLGASADQAQI 166

Query: 124 ------EVTTTSNTGPRVP--PMTSDSRG----DLQTVADVSLK--SNL--------PKK 183
                 E  T  +    +P  P+ +DS      ++Q  +  +LK  +NL        PK 
Sbjct: 167 EEGTQKEKLTIPSPSVEIPVSPLHADSGPRDFCNMQAGSSFALKDLTNLSDGPSPIHPKP 226

Query: 184 AKGDGSDPLASQWSSDCSLPAAGIGDNEKKQNPTSVVIATEKKQTKRFGYVPIGLSVQRL 243
            K      +    +    LPA   G      +          K+           +VQ L
Sbjct: 227 WKRQARQAIDPNQTLSIHLPAKRPGKENMDSHQAQKTQKFMAKENSSEEQTTKAAAVQEL 286

Query: 244 EEFQKRKDGPIMLSFDNIKCPKMEEESDKEAGTTWQLICRLHNFCDDAWVIG----GDLN 303
               + KD P++L    ++    E   +K  GT    IC +  F +    +G    GD N
Sbjct: 287 SRLVREKD-PLVLFV--VETGLDEARLEKLIGTMSHGICCIF-FINKVPCLGAVYVGDYN 346

Query: 304 EILWDNENSKGPTRDHRLMTNFREVLDGCNLMDLGFLGSTYTWCNRREDGDQVSLRLDRF 363
           E+   +E   G     R M +FR+ +D C  +DLGF+G  +TWCN R     +  RLDR 
Sbjct: 347 ELTSIDEKVGGIIHSERQMQDFRDAIDSCGFIDLGFVGEPFTWCNNRLGSATIWERLDRG 406

Query: 364 IGNSNFCSLFPNHLVLHQDWAKSDHRPIELNLLGSHFSSSPRRGNLSFKFEEWWTHHVEC 386
           +  + + S+FPN  + H D   SDH P+ LNL+ ++ + S +R    F+FEE W   + C
Sbjct: 407 LATAEWMSMFPNASLHHIDNGTSDHCPLWLNLVATNPAHSSQR--RPFRFEEIWLSDLSC 463

BLAST of Lag0001254 vs. ExPASy TrEMBL
Match: A0A2N9IMU2 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS53311 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 3.0e-27
Identity = 111/427 (26.00%), Postives = 173/427 (40.52%), Query Frame = 0

Query: 4   EVIWRTFKATWKLERGLQVETLGKNIFIFRLTVEEDRTRVVRQSPCHFDKFLLVLEFPIR 63
           E I RTF+  W+ E+G  V+ LG N  +     + D  RV+   P  +DKFL+VL+    
Sbjct: 47  EAITRTFRPLWRAEKGFVVKDLGDNNALITFQDDVDLERVITNGPWSYDKFLVVLQRIED 106

Query: 64  SQKPSDYKFLFSAFWIHVYDLPLDWYNDVMVERIGNAIADYEVTTTSNTGPRVP-PMTSD 123
               +      + FW+ ++ LPL                          GP  P P    
Sbjct: 107 DTPLASLSLNLAVFWVQIHGLPLR-------------------CMKREIGPIHPKPWKRQ 166

Query: 124 SRGDLQTVADVSLKSNLPKKAKGDGSDPLASQWSSDCSLPAAGIGDNEKKQNPTSVV--- 183
           +R  +    + +L  +LP  AK  G + + S  +       A    +E++    + V   
Sbjct: 167 ARQAID--PNQTLSIHLP--AKRPGKENMDSHQAQKTQKFMAKENSSEEQTTKAAAVQEL 226

Query: 184 --IATEKKQTKRFGYVPIGLSVQRLEEFQKR-----------------------KDGPIM 243
             +  EK     F  V  GL   RLE  + R                       K+  I 
Sbjct: 227 SRLVREKDPLVLF-VVETGLDEARLEVLRVRLGFHNKLGVYRREQGGGLALFWKKEANIQ 286

Query: 244 LS------FDNIKCPKMEEE----------SDKEAGTTWQLICRLHNFCDDAWVIGGDLN 303
           ++       D+I    ME                   +W L+  LH      W   GD N
Sbjct: 287 INSYSLHHIDSIVNAGMENSWRFTSFYGFAETHRHHESWNLLHLLHQQSSLPWCCVGDYN 346

Query: 304 EILWDNENSKGPTRDHRLMTNFREVLDGCNLMDLGFLGSTYTWCNRREDGDQVSLRLDRF 363
           E+   +E   G     R M +FR+ +D C  +DLGF+G  +TWCN R     +  RLDR 
Sbjct: 347 ELTSIDEKVGGIIHSERQMQDFRDAIDSCGFIDLGFVGEPFTWCNNRLGSATIWERLDRG 406

Query: 364 IGNSNFCSLFPNHLVLHQDWAKSDHRPIELNLLGSHFSSSPRRGNLSFKFEEWWTHHVEC 386
           +  + + S+FPN  + H D   SDH P+ LNL+ ++ + S +R    F+FEE W   + C
Sbjct: 407 LATAEWMSMFPNASLHHIDNGTSDHCPLWLNLVATNPAHSSQR--RPFRFEEIWLSDLSC 447

BLAST of Lag0001254 vs. ExPASy TrEMBL
Match: A0A2Z6P0M1 (DUF4283 domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_408390 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 5.7e-26
Identity = 105/442 (23.76%), Postives = 177/442 (40.05%), Query Frame = 0

Query: 14  WKLERGLQVETLGKNIFIFRLTVEEDRTRVVRQSPCHFDKFLLVLEFPIRSQKPSDYKFL 73
           W L+  ++++ L KN+F+FR   + D   V++     FD+ L+VL+     ++PSD +  
Sbjct: 56  WSLKNQIEIQDLSKNLFLFRFATKRDLETVLKNGLWSFDRNLVVLKRISGEEQPSDLEIF 115

Query: 74  FSAFWIHVYDLPLDWYNDVMVERIGNAIADYEVTTTSNTGPRVPPMTSDSRGDLQTVADV 133
            + FW  +YDLPL   +D M E++GN I  + V      G R+          L+T  D+
Sbjct: 116 SADFWARIYDLPLKLRSDAMAEKLGNTIGKF-VEVDIKEGHRLGKFLR-----LKTTVDL 175

Query: 134 --SLKSNLPKKAKGDGSDPLASQ----WSSDCSLPAAGI-GDNEKKQNPTSV------VI 193
              LK       +G        +    W    S P   +  D +K+Q+P+S         
Sbjct: 176 RKPLKRGTVINFQGKKLQVFFKKRTPIWLMAESFPLPKVSSDIKKEQSPSSCNKSLFSET 235

Query: 194 ATEKKQTKRFGYVPIGLSVQRLEEFQKRKDG----------PIMLSFD------------ 253
           +T K ++K       GL ++ + E +K K            P    ++            
Sbjct: 236 STSKGESKESS--AKGLEIEVVSEIRKGKSSNNKEDNAPPLPDKAQYEVDEMERIRNRCG 295

Query: 254 ------------------NIKCPKMEEESD-------------KEAGTTWQLICRLHNFC 313
                              + C +  +  D                  TW+LI + H+  
Sbjct: 296 FSSCILVACSGSGRDRAGGLSCGRTRDRGDDWFLSCIYGHPEENNKWRTWELIKQTHDQV 355

Query: 314 DDAWVIGGDLNEILWDNENSKGPTRDHRLMTNFREVLDGCNLMDLGFLGSTYTWCNRRED 373
              W+  GDLN++L  ++   G  R    +    + ++ C L D+GF G  +TW N R+ 
Sbjct: 356 GHKWLCIGDLNDMLQVDDKKGGLVRSQSQLGIGTQTVEACGLNDMGFEGYPFTWTNGRQR 415

Query: 374 GDQVSLRLDRFIGNSNFCSLFPNHLVLHQDWAKSDHRPIELNLLGSHFSSSPRRGNLSFK 390
              V  RLD+ +G  +F + F    V H     SDH  I + L   H     ++    F+
Sbjct: 416 SKNVQCRLDKALGTKDFLNRFSPWKVSHLQRYGSDHAAILIQL--EHHDCGKKKRVHLFR 475

BLAST of Lag0001254 vs. ExPASy TrEMBL
Match: A0A2N9GA96 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24033 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 7.4e-26
Identity = 120/458 (26.20%), Postives = 185/458 (40.39%), Query Frame = 0

Query: 9   TFKATWKLERGLQVETLGKNIFIFRLTVEEDRTRVVRQSPCHFDKFLLVLEFPIRSQKPS 68
           T ++ W    G+ +  + KN+F+      +D  RV  QSP  FDK L+++       +P+
Sbjct: 65  TVRSLWAGMGGVTIRDIEKNLFLAVFQTRDDLERVFVQSPLTFDKKLILVVRFEGDLQPN 124

Query: 69  DYKFLFSAFWIHVYDLPLDWYNDVMVERIGNAIAD-----YEVTTTSNTGP--------- 128
              F  SAFWI VY+LP+      M+  +G  I+       EV    N  P         
Sbjct: 125 AVNFTHSAFWIRVYNLPI----KSMIREVGEDISRDIGLFIEVDVPENGAPLLRQQTMRR 184

Query: 129 --RVPPMTSDSR-GDLQTVADVSLKSNL--------PKKAKGDGSDPLASQWSSDCSLPA 188
             + PP + D R     T+A+  + + L             GD   P +++ SS  S P 
Sbjct: 185 QRQSPPESDDDREASEPTLANNPIATALVLPDMEEGVHSVGGDSHIPPSTELSSQESNPV 244

Query: 189 AGIGDNEKK-----QNPTSVVI-------------------ATEKKQTKRFGYVPIGLSV 248
             + + +       +   S+V+                    T            +G S 
Sbjct: 245 HVVFETQLTNSLFVEENVSIVVQPVLHSIADHAQLNMLSHSTTTTNMAMESNVGTVGPS- 304

Query: 249 QRLEEFQKRKDGPIMLSFDNIK----CPKM------------EEESDKEAGTT------- 308
            +   ++KR   P +   D  K    C K             +E S K+   T       
Sbjct: 305 -KASRWKKRACAPSVQEMDPSKVLQSCGKRSLDVYVDTVVDPKEPSLKKRRVTGFYGHPE 364

Query: 309 -------WQLICRLHNFCDDAWVIGGDLNEILWDNENSKGPTRDHRLMTNFREVLDGCNL 368
                  W+L+  L +  +  W++ GD NEI    E      R+   M  FRE L  C+L
Sbjct: 365 VALRHRSWELLRHLCHISNVPWIVMGDFNEITRLEEKMSRDARNANQMAGFREALLDCSL 424

Query: 369 MDLGFLGSTYTWCNRREDGDQVSLRLDRFIGNSNFCSLFPNHLVLHQDWAKSDHRPIELN 386
            DLGF G+ +TW N+R+    V  RLDR + +  + SLFPN  V H   A SDH  + ++
Sbjct: 425 QDLGFTGAEFTWSNKRDYPGLVRARLDRGVASGQWRSLFPNASVQHLVVASSDHMGLLMD 484

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_027118730.17.9e-3028.05uncharacterized protein LOC113735973 [Coffea arabica][more]
XP_041011336.14.8e-2742.24uncharacterized protein LOC121255118 [Juglans microcarpa x Juglans regia][more]
XP_030498017.11.4e-2640.49uncharacterized protein LOC115713672 [Cannabis sativa][more]
KAF5443558.19.0e-2642.28hypothetical protein F2P56_036105, partial [Juglans regia][more]
XP_040987679.19.0e-2639.75uncharacterized protein LOC121235397 [Juglans microcarpa x Juglans regia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6P6WTP13.8e-3028.05uncharacterized protein LOC113735973 OS=Coffea arabica OX=13443 GN=LOC113735973 ... [more]
A0A2N9I0P41.2e-2826.93Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
A0A2N9IMU23.0e-2726.00Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
A0A2Z6P0M15.7e-2623.76DUF4283 domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_4083... [more]
A0A2N9GA967.4e-2626.20Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24033 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025558Domain of unknown function DUF4283PFAMPF14111DUF4283coord: 6..103
e-value: 7.0E-15
score: 54.8
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10Endonuclease/exonuclease/phosphatasecoord: 201..350
e-value: 2.0E-15
score: 59.2
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 236..349
NoneNo IPR availablePANTHERPTHR33710:SF40ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEINcoord: 256..386
NoneNo IPR availablePANTHERPTHR33710BNAC02G09200D PROTEINcoord: 256..386

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0001254.1Lag0001254.1mRNA