Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCAGAAGTCATTTGGAGGACGTTTAAAGCTACTTGGAAACTAGAGCGGGGGCTACAAGTCGAGACGTTGGGTAAGAATATTTTCATTTTCAGACTCACGGTGGAAGAGGATAGGACGAGGGTTGTGAGACAGAGCCCCTGCCATTTTGATAAATTTCTTTTGGTGTTAGAGTTCCCGATCAGGTCACAAAAGCCATCGGATTATAAATTTTTGTTCTCGGCTTTTTGGATTCATGTATATGACCTTCCATTAGATTGGTACAATGACGTCATGGTAGAGCGAATAGGAAATGCCATTGGTATTTATGAAGAAGTGGATAGCCGAAACGGCTACCATTTTTGGGGAGCAAGCTTGTGAACCCGTGTGAGGATTGACATCTCTCGTCCTCTCCAGCGTAGAATCAAAATCAATATTGATGGTCCAGGGGAAGGAAGCTGGATACTAATCTATTACGAGAAATTGCTCGAATTTTGTGCCCATTGTGGAATTATTGGTCATCCTATGAAGGATTGTAGTCTCTTCTATAGAACAAAGAAATAACCCAATTCACTTCCTCAATATGGTGATTGGCTTCGATATAACGGCAAGGGCGATGTAATGGCCAGATCTCCGGCGAGGGACCAACCACGGGATTTCCATGATTTAGCAGTCCTAGCTCAACCTCTCTTGACAGAAACTTAGGTGGCCATGGATACTATGGAATATGAGGCTCCGATTGGTTCAATTGTGCAGCCGACTATGAAGTCACGACAACCTCCAATACCGGTCCAAGAGTCCCACCGATGACAAGCGGTCAATCTCAGTCCTGCCCACTACTCACTTTCCAACGAAACGATGTGATCCAGTAAGGGGAAAGAAAATGTATGTGAAATAGCGGTGAAATTTAGAGGAGGAAGCCAGCTCTAACTCGACCTTGGTTGGCGAAAAGTTTGGGTCCAACCAGGCTTCAGGAGAGTGTAACGTCTTTTGGGCCGCCATTAATAGCCCATGGGTTACAAATCCATCGATATTTAAGGCTCCCTCACCGAATAAATTATTCCATTTCATTTCAGGATCCACGAGCGAGAATTAGAGGATCAAAGATATTATTGCTCATTGTAACCGCCATTTATCACGGCAACTGTTGGAAATTTTCAACGGTGCAGATTCGAGGGGCGATTTACAGACTGTTGCAGATGTTTCCTTGAAGTCGAATCTGCCTAAGAAGGCGAAAGGGGATGGGTCCGATCCGTTGGCGAGTCAATGGTCGTCGGACTGTTCCTTGCCTGCGGCTGGCATTGGTGATAACGAGAAGAAGCAAAACCCCACAAGCGTTGTTATTGCTACTGAGAAGAAGCAAACAAAAAGATTCGGTTAAGGGCTACCACGGTCATGCATTCGAAGGAAGGAATCAGCAAAGGTCCTAAATGAAAGAAGCGTGCTTGTGCAGGTTATGTACCTATTGGGCTATCTGTGCAACGACTAGAGGAGTTCCAAAAGCGTAAGGATGGGCCAATAATGCTATCTTTTGATAACATAAAGTGTCCAAAGATGGAAGAGGAGTCTGATAAGGAGGCGGGGACTGTTGGACAACCTCGCTCAGATCCATGAAGATTATCTGTTGGAATGTTCGTGGGTTGGAGAGCCCATGGACATTCTAAAATGTAAGCGACGAATTATCGCGCTTAAATCCTCATCTATGTTTCCTTTCTGAGACTAAATGTTCGTCATTTCAATTGAATAAACTGAAAGCTCGTTTGCATTATTCCTGTTGTTTTGTGGTTAATAGAGTCGGGTTGAGTGGTGGTCTTTGCATGTTATGGAAAGATGAAGTGAATGTTTGTATCAGAAATTACACTATCCATCATACCGACGCAAATATAATTTGGCAAGATAAACAATGGCGATTCACCGGTTTATATGGATAACCTGATTCTTGTTTGAGATCATAGACCTGGCAACTCATATGCCGCTTACATAATTTTTGTGATGATGCATGGGTTATTGGAGGTGATCTTAATGAGATTCTTTGGGACAATGAGAATTCAAAAGGTCCTACTCGGGACCATCGCCTGATGACGAATTTTAGGGAGGTCTTGGATGGCTGCAATCTCATGGATTTGGGCTTTTTAGGCAGCACTTATACTTGGTGCAATAGGAGAGAAGATGGTGATCAAGTGAGCTTACGCCTAGATCGTTTTATTGGAAACTCTAATTTCTGTTCTTTGTTTCCAAATCACCTGGTTCTGCATCAAGATTGGGCAAAATCGGACCATCGTCCAATTGAACTGAACTTACTAGGCTCGCACTTCAGTAGCAGCCCAAGAAGAGGAAACCTATCCTTTAAATTTGAGGAATGGTGGACGCACCATGTAGAGTGCAAGGAAATTATTGCTCGAGCTAGGGTTGGGGTTGTAGAGGAGCGAAGTCTGCAACCTACAAAACCGACTTAA
mRNA sequence
ATGGCTGCAGAAGTCATTTGGAGGACGTTTAAAGCTACTTGGAAACTAGAGCGGGGGCTACAAGTCGAGACGTTGGGTAAGAATATTTTCATTTTCAGACTCACGGTGGAAGAGGATAGGACGAGGGTTGTGAGACAGAGCCCCTGCCATTTTGATAAATTTCTTTTGGTGTTAGAGTTCCCGATCAGGTCACAAAAGCCATCGGATTATAAATTTTTGTTCTCGGCTTTTTGGATTCATGTATATGACCTTCCATTAGATTGGTACAATGACGTCATGGTAGAGCGAATAGGAAATGCCATTGCCGACTATGAAGTCACGACAACCTCCAATACCGGTCCAAGAGTCCCACCGATGACAAGCGATTCGAGGGGCGATTTACAGACTGTTGCAGATGTTTCCTTGAAGTCGAATCTGCCTAAGAAGGCGAAAGGGGATGGGTCCGATCCGTTGGCGAGTCAATGGTCGTCGGACTGTTCCTTGCCTGCGGCTGGCATTGGTGATAACGAGAAGAAGCAAAACCCCACAAGCGTTGTTATTGCTACTGAGAAGAAGCAAACAAAAAGATTCGGTTATGTACCTATTGGGCTATCTGTGCAACGACTAGAGGAGTTCCAAAAGCGTAAGGATGGGCCAATAATGCTATCTTTTGATAACATAAAGTGTCCAAAGATGGAAGAGGAGTCTGATAAGGAGGCGGGGACTACCTGGCAACTCATATGCCGCTTACATAATTTTTGTGATGATGCATGGGTTATTGGAGGTGATCTTAATGAGATTCTTTGGGACAATGAGAATTCAAAAGGTCCTACTCGGGACCATCGCCTGATGACGAATTTTAGGGAGGTCTTGGATGGCTGCAATCTCATGGATTTGGGCTTTTTAGGCAGCACTTATACTTGGTGCAATAGGAGAGAAGATGGTGATCAAGTGAGCTTACGCCTAGATCGTTTTATTGGAAACTCTAATTTCTGTTCTTTGTTTCCAAATCACCTGGTTCTGCATCAAGATTGGGCAAAATCGGACCATCGTCCAATTGAACTGAACTTACTAGGCTCGCACTTCAGTAGCAGCCCAAGAAGAGGAAACCTATCCTTTAAATTTGAGGAATGGTGGACGCACCATGTAGAGTGCAAGGAAATTATTGCTCGAGCTAGGGTTGGGGTTGTAGAGGAGCGAAGTCTGCAACCTACAAAACCGACTTAA
Coding sequence (CDS)
ATGGCTGCAGAAGTCATTTGGAGGACGTTTAAAGCTACTTGGAAACTAGAGCGGGGGCTACAAGTCGAGACGTTGGGTAAGAATATTTTCATTTTCAGACTCACGGTGGAAGAGGATAGGACGAGGGTTGTGAGACAGAGCCCCTGCCATTTTGATAAATTTCTTTTGGTGTTAGAGTTCCCGATCAGGTCACAAAAGCCATCGGATTATAAATTTTTGTTCTCGGCTTTTTGGATTCATGTATATGACCTTCCATTAGATTGGTACAATGACGTCATGGTAGAGCGAATAGGAAATGCCATTGCCGACTATGAAGTCACGACAACCTCCAATACCGGTCCAAGAGTCCCACCGATGACAAGCGATTCGAGGGGCGATTTACAGACTGTTGCAGATGTTTCCTTGAAGTCGAATCTGCCTAAGAAGGCGAAAGGGGATGGGTCCGATCCGTTGGCGAGTCAATGGTCGTCGGACTGTTCCTTGCCTGCGGCTGGCATTGGTGATAACGAGAAGAAGCAAAACCCCACAAGCGTTGTTATTGCTACTGAGAAGAAGCAAACAAAAAGATTCGGTTATGTACCTATTGGGCTATCTGTGCAACGACTAGAGGAGTTCCAAAAGCGTAAGGATGGGCCAATAATGCTATCTTTTGATAACATAAAGTGTCCAAAGATGGAAGAGGAGTCTGATAAGGAGGCGGGGACTACCTGGCAACTCATATGCCGCTTACATAATTTTTGTGATGATGCATGGGTTATTGGAGGTGATCTTAATGAGATTCTTTGGGACAATGAGAATTCAAAAGGTCCTACTCGGGACCATCGCCTGATGACGAATTTTAGGGAGGTCTTGGATGGCTGCAATCTCATGGATTTGGGCTTTTTAGGCAGCACTTATACTTGGTGCAATAGGAGAGAAGATGGTGATCAAGTGAGCTTACGCCTAGATCGTTTTATTGGAAACTCTAATTTCTGTTCTTTGTTTCCAAATCACCTGGTTCTGCATCAAGATTGGGCAAAATCGGACCATCGTCCAATTGAACTGAACTTACTAGGCTCGCACTTCAGTAGCAGCCCAAGAAGAGGAAACCTATCCTTTAAATTTGAGGAATGGTGGACGCACCATGTAGAGTGCAAGGAAATTATTGCTCGAGCTAGGGTTGGGGTTGTAGAGGAGCGAAGTCTGCAACCTACAAAACCGACTTAA
Protein sequence
MAAEVIWRTFKATWKLERGLQVETLGKNIFIFRLTVEEDRTRVVRQSPCHFDKFLLVLEFPIRSQKPSDYKFLFSAFWIHVYDLPLDWYNDVMVERIGNAIADYEVTTTSNTGPRVPPMTSDSRGDLQTVADVSLKSNLPKKAKGDGSDPLASQWSSDCSLPAAGIGDNEKKQNPTSVVIATEKKQTKRFGYVPIGLSVQRLEEFQKRKDGPIMLSFDNIKCPKMEEESDKEAGTTWQLICRLHNFCDDAWVIGGDLNEILWDNENSKGPTRDHRLMTNFREVLDGCNLMDLGFLGSTYTWCNRREDGDQVSLRLDRFIGNSNFCSLFPNHLVLHQDWAKSDHRPIELNLLGSHFSSSPRRGNLSFKFEEWWTHHVECKEIIARARVGVVEERSLQPTKPT
Homology
BLAST of Lag0001254 vs. NCBI nr
Match:
XP_027118730.1 (uncharacterized protein LOC113735973 [Coffea arabica])
HSP 1 Score: 142.5 bits (358), Expect = 7.9e-30
Identity = 115/410 (28.05%), Postives = 174/410 (42.44%), Query Frame = 0
Query: 3 AEVIWRTFKATWKLERGLQVETLGKNIFIFRLTVEEDRTRVVRQSPCHFDKFLLVLEFPI 62
AE + T K +W +GL+ +G N+F+F+ D+ +V+ P FD LLV+ +
Sbjct: 52 AEAMMATMKKSWNPAKGLEYSAVGDNLFLFKFNDIVDKRKVMAGCPWAFDGSLLVVSDYV 111
Query: 63 RSQKPSDYKFLFSAFWIHVYDLPLDWYNDVMVERIGNAIADYE-------VTTTSNTGPR 122
+ +PS K +FW+ VY+LPL W N + IG+ + YE ++ R
Sbjct: 112 GNIQPSKVKLDHCSFWVQVYNLPLGWMNGRTADFIGSKLGTYEGFDAKGGLSVGKFLRIR 171
Query: 123 VPPMTSDSRGDLQ------TVADVSLK-SNLPK---------KAKGDGSDPLASQWSSDC 182
V ++ L V +V + LP + D D L +SD
Sbjct: 172 VKLNLNNPLKRLMKLLIEGAVCEVHFRYERLPTHCNFCGRIGHGERDCEDKLDVAKASD- 231
Query: 183 SLPAAGIGDNEKKQNP----TSVVIATEKKQTKRFGYVPIGLSVQRLEEFQKRKDGPIML 242
+ +G + Q P S ++AT+++ PI LS + + +
Sbjct: 232 --SPSLVGSPDPTQRPDVQIPSTLVATQRRPLSLDNDQPI-LSTALVTDSSPTAQVHMTD 291
Query: 243 SFDNIKCPKMEEESDKEAGTTWQLICRLHNFCDDAWVIGGDLNEILWDNENSKGPTRDHR 302
S + E+ K TW ++ +L C WV GD NE+L E R
Sbjct: 292 SSWRLTGFYGHPEATKRK-HTWDIMRKLSTLCCLPWVCMGDFNEVLTQEEFQGATWRPKW 351
Query: 303 LMTNFREVLDGCNLMDLGFLGSTYTWCNRREDGDQVSLRLDRFIGNSNFCSLFPNHLVLH 362
+ NFR+ L CNL DLG G+ +TWC R D RLDR + +F +LFP+ + H
Sbjct: 352 QIMNFRKALSDCNLFDLGHEGNRFTWCRNRSAPDTTRARLDRACVSHDFLTLFPDARIYH 411
Query: 363 QDWAKSDHRPIELNLLGSH---FSSSPRRGNLSFKFEEWWTHHVECKEII 383
SDH PI L L H + S R + F FE W +C+ II
Sbjct: 412 SHALFSDHVPIVLRLSCLHDLFKARSKSRRDKRFMFEAMWIRSEDCERII 456
BLAST of Lag0001254 vs. NCBI nr
Match:
XP_041011336.1 (uncharacterized protein LOC121255118 [Juglans microcarpa x Juglans regia])
HSP 1 Score: 133.3 bits (334), Expect = 4.8e-27
Identity = 68/161 (42.24%), Postives = 90/161 (55.90%), Query Frame = 0
Query: 236 TWQLICRLHNFCDDAWVIGGDLNEILWDNENSKGPTRDHRLMTNFREVLDGCNLMDLGFL 295
TW LI L D W++ GD NE+L + E S G R M +FR V+D C L+DLGF
Sbjct: 76 TWDLIRSLKMPSDQGWLLMGDFNEVLSNQEKSGGRDRSDMQMQDFRVVVDECELLDLGFQ 135
Query: 296 GSTYTWCNRREDGDQVSLRLDRFIGNSNFCSLFPNHLVLHQDWAKSDHRPIELNLLGSHF 355
G+ +TWCN RE +S RLDR + N + +LFP V+H + A SDH PI+L L + F
Sbjct: 136 GTPFTWCNNRETDHSISERLDRCLANLKWKALFPMVKVIHGNAAYSDHIPIKLQLQSNEF 195
Query: 356 SSSPRRGNLSFKFEEWWTHHVECKEIIARARVGVVEERSLQ 397
R+G F FE W C+EII A V ER+++
Sbjct: 196 L---RKGRKPFHFEAMWVEDKNCQEIIKIAWVDSAGERTME 233
BLAST of Lag0001254 vs. NCBI nr
Match:
XP_030498017.1 (uncharacterized protein LOC115713672 [Cannabis sativa])
HSP 1 Score: 131.7 bits (330), Expect = 1.4e-26
Identity = 66/163 (40.49%), Postives = 90/163 (55.21%), Query Frame = 0
Query: 223 PKMEEESDKEAGTTWQLICRLHNFCDDAWVIGGDLNEILWDNENSKGPTRDHRLMTNFRE 282
PK +D +W+L+CRL D W+ GGD NEIL NE G R +T F++
Sbjct: 91 PKASSTAD-----SWKLLCRLKGLFDLPWICGGDFNEILSINERKGGVDRSLSAITEFQQ 150
Query: 283 VLDGCNLMDLGFLGSTYTWCNRREDGDQVSLRLDRFIGNSNFCSLFPNHLVLHQDWAKSD 342
LD C L+D+GF G +TW N+R V RLDR+ N + SLFP+ VL+ D+ SD
Sbjct: 151 ALDNCALVDMGFEGQCFTWLNKRHGAAHVQERLDRYFCNQEWNSLFPSVKVLNGDFIHSD 210
Query: 343 HRPIELNLLGSHFSSSPRRGNLSFKFEEWWTHHVECKEIIARA 386
HRPI + +L + S P SF+FE W EC +I+ +A
Sbjct: 211 HRPI-VAVLENIVRSHPHDNKRSFRFETHWLKDAECHDIVTQA 247
BLAST of Lag0001254 vs. NCBI nr
Match:
KAF5443558.1 (hypothetical protein F2P56_036105, partial [Juglans regia])
HSP 1 Score: 129.0 bits (323), Expect = 9.0e-26
Identity = 63/149 (42.28%), Postives = 82/149 (55.03%), Query Frame = 0
Query: 236 TWQLICRLHNFCDDAWVIGGDLNEILWDNENSKGPTRDHRLMTNFREVLDGCNLMDLGFL 295
TW L+ RL++ D W++GGD NE+L NE G R M FR V+ C+L DLGF
Sbjct: 117 TWNLLRRLNSGVDGPWLVGGDFNELLHFNEKRGGRPRSENQMEAFRNVIFDCSLRDLGFR 176
Query: 296 GSTYTWCNRREDGDQVSLRLDRFIGNSNFCSLFPNHLVLHQDWAKSDHRPIELNLLGSHF 355
G YTWCN R +S RLDRF+GN+ FC+LFP +V H A SDH P+ + S
Sbjct: 177 GPKYTWCNGRAGSRAISERLDRFLGNNQFCALFPQFVVRHGMAAYSDHLPVWFD---SEE 236
Query: 356 SSSPRRGNLSFKFEEWWTHHVECKEIIAR 385
+ F+FE W +C +II R
Sbjct: 237 LEKRNKAPKLFRFEAMWVGVEQCSQIINR 262
BLAST of Lag0001254 vs. NCBI nr
Match:
XP_040987679.1 (uncharacterized protein LOC121235397 [Juglans microcarpa x Juglans regia])
HSP 1 Score: 129.0 bits (323), Expect = 9.0e-26
Identity = 64/161 (39.75%), Postives = 89/161 (55.28%), Query Frame = 0
Query: 236 TWQLICRLHNFCDDAWVIGGDLNEILWDNENSKGPTRDHRLMTNFREVLDGCNLMDLGFL 295
TW LI L D W++ GD NE+L ++E S G R M F+ V+D C LMDLGF
Sbjct: 119 TWDLIRSLKLPQDQGWLLIGDFNEVLSNHEKSGGRESSDRQMQAFQAVVDECELMDLGFQ 178
Query: 296 GSTYTWCNRREDGDQVSLRLDRFIGNSNFCSLFPNHLVLHQDWAKSDHRPIELNLLGSHF 355
G+ +TWCN RE +S RLDR + + + + FP V+H SDH PI+ ++ HF
Sbjct: 179 GNPFTWCNNRETDQCISERLDRCLASLKWKAFFPMAKVIHGTTTYSDHTPIKSHV---HF 238
Query: 356 SSSPRRGNLSFKFEEWWTHHVECKEIIARARVGVVEERSLQ 397
+S RRG F+FE W C+E+I A + ER ++
Sbjct: 239 ASVQRRGKRPFRFEAMWVEDSSCQEVIKEAWLDSAGERRME 276
BLAST of Lag0001254 vs. ExPASy TrEMBL
Match:
A0A6P6WTP1 (uncharacterized protein LOC113735973 OS=Coffea arabica OX=13443 GN=LOC113735973 PE=4 SV=1)
HSP 1 Score: 142.5 bits (358), Expect = 3.8e-30
Identity = 115/410 (28.05%), Postives = 174/410 (42.44%), Query Frame = 0
Query: 3 AEVIWRTFKATWKLERGLQVETLGKNIFIFRLTVEEDRTRVVRQSPCHFDKFLLVLEFPI 62
AE + T K +W +GL+ +G N+F+F+ D+ +V+ P FD LLV+ +
Sbjct: 52 AEAMMATMKKSWNPAKGLEYSAVGDNLFLFKFNDIVDKRKVMAGCPWAFDGSLLVVSDYV 111
Query: 63 RSQKPSDYKFLFSAFWIHVYDLPLDWYNDVMVERIGNAIADYE-------VTTTSNTGPR 122
+ +PS K +FW+ VY+LPL W N + IG+ + YE ++ R
Sbjct: 112 GNIQPSKVKLDHCSFWVQVYNLPLGWMNGRTADFIGSKLGTYEGFDAKGGLSVGKFLRIR 171
Query: 123 VPPMTSDSRGDLQ------TVADVSLK-SNLPK---------KAKGDGSDPLASQWSSDC 182
V ++ L V +V + LP + D D L +SD
Sbjct: 172 VKLNLNNPLKRLMKLLIEGAVCEVHFRYERLPTHCNFCGRIGHGERDCEDKLDVAKASD- 231
Query: 183 SLPAAGIGDNEKKQNP----TSVVIATEKKQTKRFGYVPIGLSVQRLEEFQKRKDGPIML 242
+ +G + Q P S ++AT+++ PI LS + + +
Sbjct: 232 --SPSLVGSPDPTQRPDVQIPSTLVATQRRPLSLDNDQPI-LSTALVTDSSPTAQVHMTD 291
Query: 243 SFDNIKCPKMEEESDKEAGTTWQLICRLHNFCDDAWVIGGDLNEILWDNENSKGPTRDHR 302
S + E+ K TW ++ +L C WV GD NE+L E R
Sbjct: 292 SSWRLTGFYGHPEATKRK-HTWDIMRKLSTLCCLPWVCMGDFNEVLTQEEFQGATWRPKW 351
Query: 303 LMTNFREVLDGCNLMDLGFLGSTYTWCNRREDGDQVSLRLDRFIGNSNFCSLFPNHLVLH 362
+ NFR+ L CNL DLG G+ +TWC R D RLDR + +F +LFP+ + H
Sbjct: 352 QIMNFRKALSDCNLFDLGHEGNRFTWCRNRSAPDTTRARLDRACVSHDFLTLFPDARIYH 411
Query: 363 QDWAKSDHRPIELNLLGSH---FSSSPRRGNLSFKFEEWWTHHVECKEII 383
SDH PI L L H + S R + F FE W +C+ II
Sbjct: 412 SHALFSDHVPIVLRLSCLHDLFKARSKSRRDKRFMFEAMWIRSEDCERII 456
BLAST of Lag0001254 vs. ExPASy TrEMBL
Match:
A0A2N9I0P4 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45471 PE=4 SV=1)
HSP 1 Score: 137.5 bits (345), Expect = 1.2e-28
Identity = 115/427 (26.93%), Postives = 181/427 (42.39%), Query Frame = 0
Query: 4 EVIWRTFKATWKLERGLQVETLGKNIFIFRLTVEEDRTRVVRQSPCHFDKFLLVLEFPIR 63
E I RTF+ W+ E+G V+ LG N + + D RV+ P +DKFL+VL+
Sbjct: 47 EAITRTFRPLWRAEKGFVVKDLGDNNALITFQDDVDLERVITNGPWSYDKFLVVLQRIED 106
Query: 64 SQKPSDYKFLFSAFWIHVYDLPLDWYNDVMVERIGN----------------AIADY--- 123
+ + FW+ ++ LPL M IG+ A AD
Sbjct: 107 DTPLASLSLNLAVFWVQIHGLPL----RCMKREIGSRRMSHRSRQANLLHLGASADQAQI 166
Query: 124 ------EVTTTSNTGPRVP--PMTSDSRG----DLQTVADVSLK--SNL--------PKK 183
E T + +P P+ +DS ++Q + +LK +NL PK
Sbjct: 167 EEGTQKEKLTIPSPSVEIPVSPLHADSGPRDFCNMQAGSSFALKDLTNLSDGPSPIHPKP 226
Query: 184 AKGDGSDPLASQWSSDCSLPAAGIGDNEKKQNPTSVVIATEKKQTKRFGYVPIGLSVQRL 243
K + + LPA G + K+ +VQ L
Sbjct: 227 WKRQARQAIDPNQTLSIHLPAKRPGKENMDSHQAQKTQKFMAKENSSEEQTTKAAAVQEL 286
Query: 244 EEFQKRKDGPIMLSFDNIKCPKMEEESDKEAGTTWQLICRLHNFCDDAWVIG----GDLN 303
+ KD P++L ++ E +K GT IC + F + +G GD N
Sbjct: 287 SRLVREKD-PLVLFV--VETGLDEARLEKLIGTMSHGICCIF-FINKVPCLGAVYVGDYN 346
Query: 304 EILWDNENSKGPTRDHRLMTNFREVLDGCNLMDLGFLGSTYTWCNRREDGDQVSLRLDRF 363
E+ +E G R M +FR+ +D C +DLGF+G +TWCN R + RLDR
Sbjct: 347 ELTSIDEKVGGIIHSERQMQDFRDAIDSCGFIDLGFVGEPFTWCNNRLGSATIWERLDRG 406
Query: 364 IGNSNFCSLFPNHLVLHQDWAKSDHRPIELNLLGSHFSSSPRRGNLSFKFEEWWTHHVEC 386
+ + + S+FPN + H D SDH P+ LNL+ ++ + S +R F+FEE W + C
Sbjct: 407 LATAEWMSMFPNASLHHIDNGTSDHCPLWLNLVATNPAHSSQR--RPFRFEEIWLSDLSC 463
BLAST of Lag0001254 vs. ExPASy TrEMBL
Match:
A0A2N9IMU2 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS53311 PE=4 SV=1)
HSP 1 Score: 132.9 bits (333), Expect = 3.0e-27
Identity = 111/427 (26.00%), Postives = 173/427 (40.52%), Query Frame = 0
Query: 4 EVIWRTFKATWKLERGLQVETLGKNIFIFRLTVEEDRTRVVRQSPCHFDKFLLVLEFPIR 63
E I RTF+ W+ E+G V+ LG N + + D RV+ P +DKFL+VL+
Sbjct: 47 EAITRTFRPLWRAEKGFVVKDLGDNNALITFQDDVDLERVITNGPWSYDKFLVVLQRIED 106
Query: 64 SQKPSDYKFLFSAFWIHVYDLPLDWYNDVMVERIGNAIADYEVTTTSNTGPRVP-PMTSD 123
+ + FW+ ++ LPL GP P P
Sbjct: 107 DTPLASLSLNLAVFWVQIHGLPLR-------------------CMKREIGPIHPKPWKRQ 166
Query: 124 SRGDLQTVADVSLKSNLPKKAKGDGSDPLASQWSSDCSLPAAGIGDNEKKQNPTSVV--- 183
+R + + +L +LP AK G + + S + A +E++ + V
Sbjct: 167 ARQAID--PNQTLSIHLP--AKRPGKENMDSHQAQKTQKFMAKENSSEEQTTKAAAVQEL 226
Query: 184 --IATEKKQTKRFGYVPIGLSVQRLEEFQKR-----------------------KDGPIM 243
+ EK F V GL RLE + R K+ I
Sbjct: 227 SRLVREKDPLVLF-VVETGLDEARLEVLRVRLGFHNKLGVYRREQGGGLALFWKKEANIQ 286
Query: 244 LS------FDNIKCPKMEEE----------SDKEAGTTWQLICRLHNFCDDAWVIGGDLN 303
++ D+I ME +W L+ LH W GD N
Sbjct: 287 INSYSLHHIDSIVNAGMENSWRFTSFYGFAETHRHHESWNLLHLLHQQSSLPWCCVGDYN 346
Query: 304 EILWDNENSKGPTRDHRLMTNFREVLDGCNLMDLGFLGSTYTWCNRREDGDQVSLRLDRF 363
E+ +E G R M +FR+ +D C +DLGF+G +TWCN R + RLDR
Sbjct: 347 ELTSIDEKVGGIIHSERQMQDFRDAIDSCGFIDLGFVGEPFTWCNNRLGSATIWERLDRG 406
Query: 364 IGNSNFCSLFPNHLVLHQDWAKSDHRPIELNLLGSHFSSSPRRGNLSFKFEEWWTHHVEC 386
+ + + S+FPN + H D SDH P+ LNL+ ++ + S +R F+FEE W + C
Sbjct: 407 LATAEWMSMFPNASLHHIDNGTSDHCPLWLNLVATNPAHSSQR--RPFRFEEIWLSDLSC 447
BLAST of Lag0001254 vs. ExPASy TrEMBL
Match:
A0A2Z6P0M1 (DUF4283 domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_408390 PE=4 SV=1)
HSP 1 Score: 128.6 bits (322), Expect = 5.7e-26
Identity = 105/442 (23.76%), Postives = 177/442 (40.05%), Query Frame = 0
Query: 14 WKLERGLQVETLGKNIFIFRLTVEEDRTRVVRQSPCHFDKFLLVLEFPIRSQKPSDYKFL 73
W L+ ++++ L KN+F+FR + D V++ FD+ L+VL+ ++PSD +
Sbjct: 56 WSLKNQIEIQDLSKNLFLFRFATKRDLETVLKNGLWSFDRNLVVLKRISGEEQPSDLEIF 115
Query: 74 FSAFWIHVYDLPLDWYNDVMVERIGNAIADYEVTTTSNTGPRVPPMTSDSRGDLQTVADV 133
+ FW +YDLPL +D M E++GN I + V G R+ L+T D+
Sbjct: 116 SADFWARIYDLPLKLRSDAMAEKLGNTIGKF-VEVDIKEGHRLGKFLR-----LKTTVDL 175
Query: 134 --SLKSNLPKKAKGDGSDPLASQ----WSSDCSLPAAGI-GDNEKKQNPTSV------VI 193
LK +G + W S P + D +K+Q+P+S
Sbjct: 176 RKPLKRGTVINFQGKKLQVFFKKRTPIWLMAESFPLPKVSSDIKKEQSPSSCNKSLFSET 235
Query: 194 ATEKKQTKRFGYVPIGLSVQRLEEFQKRKDG----------PIMLSFD------------ 253
+T K ++K GL ++ + E +K K P ++
Sbjct: 236 STSKGESKESS--AKGLEIEVVSEIRKGKSSNNKEDNAPPLPDKAQYEVDEMERIRNRCG 295
Query: 254 ------------------NIKCPKMEEESD-------------KEAGTTWQLICRLHNFC 313
+ C + + D TW+LI + H+
Sbjct: 296 FSSCILVACSGSGRDRAGGLSCGRTRDRGDDWFLSCIYGHPEENNKWRTWELIKQTHDQV 355
Query: 314 DDAWVIGGDLNEILWDNENSKGPTRDHRLMTNFREVLDGCNLMDLGFLGSTYTWCNRRED 373
W+ GDLN++L ++ G R + + ++ C L D+GF G +TW N R+
Sbjct: 356 GHKWLCIGDLNDMLQVDDKKGGLVRSQSQLGIGTQTVEACGLNDMGFEGYPFTWTNGRQR 415
Query: 374 GDQVSLRLDRFIGNSNFCSLFPNHLVLHQDWAKSDHRPIELNLLGSHFSSSPRRGNLSFK 390
V RLD+ +G +F + F V H SDH I + L H ++ F+
Sbjct: 416 SKNVQCRLDKALGTKDFLNRFSPWKVSHLQRYGSDHAAILIQL--EHHDCGKKKRVHLFR 475
BLAST of Lag0001254 vs. ExPASy TrEMBL
Match:
A0A2N9GA96 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24033 PE=4 SV=1)
HSP 1 Score: 128.3 bits (321), Expect = 7.4e-26
Identity = 120/458 (26.20%), Postives = 185/458 (40.39%), Query Frame = 0
Query: 9 TFKATWKLERGLQVETLGKNIFIFRLTVEEDRTRVVRQSPCHFDKFLLVLEFPIRSQKPS 68
T ++ W G+ + + KN+F+ +D RV QSP FDK L+++ +P+
Sbjct: 65 TVRSLWAGMGGVTIRDIEKNLFLAVFQTRDDLERVFVQSPLTFDKKLILVVRFEGDLQPN 124
Query: 69 DYKFLFSAFWIHVYDLPLDWYNDVMVERIGNAIAD-----YEVTTTSNTGP--------- 128
F SAFWI VY+LP+ M+ +G I+ EV N P
Sbjct: 125 AVNFTHSAFWIRVYNLPI----KSMIREVGEDISRDIGLFIEVDVPENGAPLLRQQTMRR 184
Query: 129 --RVPPMTSDSR-GDLQTVADVSLKSNL--------PKKAKGDGSDPLASQWSSDCSLPA 188
+ PP + D R T+A+ + + L GD P +++ SS S P
Sbjct: 185 QRQSPPESDDDREASEPTLANNPIATALVLPDMEEGVHSVGGDSHIPPSTELSSQESNPV 244
Query: 189 AGIGDNEKK-----QNPTSVVI-------------------ATEKKQTKRFGYVPIGLSV 248
+ + + + S+V+ T +G S
Sbjct: 245 HVVFETQLTNSLFVEENVSIVVQPVLHSIADHAQLNMLSHSTTTTNMAMESNVGTVGPS- 304
Query: 249 QRLEEFQKRKDGPIMLSFDNIK----CPKM------------EEESDKEAGTT------- 308
+ ++KR P + D K C K +E S K+ T
Sbjct: 305 -KASRWKKRACAPSVQEMDPSKVLQSCGKRSLDVYVDTVVDPKEPSLKKRRVTGFYGHPE 364
Query: 309 -------WQLICRLHNFCDDAWVIGGDLNEILWDNENSKGPTRDHRLMTNFREVLDGCNL 368
W+L+ L + + W++ GD NEI E R+ M FRE L C+L
Sbjct: 365 VALRHRSWELLRHLCHISNVPWIVMGDFNEITRLEEKMSRDARNANQMAGFREALLDCSL 424
Query: 369 MDLGFLGSTYTWCNRREDGDQVSLRLDRFIGNSNFCSLFPNHLVLHQDWAKSDHRPIELN 386
DLGF G+ +TW N+R+ V RLDR + + + SLFPN V H A SDH + ++
Sbjct: 425 QDLGFTGAEFTWSNKRDYPGLVRARLDRGVASGQWRSLFPNASVQHLVVASSDHMGLLMD 484
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_027118730.1 | 7.9e-30 | 28.05 | uncharacterized protein LOC113735973 [Coffea arabica] | [more] |
XP_041011336.1 | 4.8e-27 | 42.24 | uncharacterized protein LOC121255118 [Juglans microcarpa x Juglans regia] | [more] |
XP_030498017.1 | 1.4e-26 | 40.49 | uncharacterized protein LOC115713672 [Cannabis sativa] | [more] |
KAF5443558.1 | 9.0e-26 | 42.28 | hypothetical protein F2P56_036105, partial [Juglans regia] | [more] |
XP_040987679.1 | 9.0e-26 | 39.75 | uncharacterized protein LOC121235397 [Juglans microcarpa x Juglans regia] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6P6WTP1 | 3.8e-30 | 28.05 | uncharacterized protein LOC113735973 OS=Coffea arabica OX=13443 GN=LOC113735973 ... | [more] |
A0A2N9I0P4 | 1.2e-28 | 26.93 | Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... | [more] |
A0A2N9IMU2 | 3.0e-27 | 26.00 | Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... | [more] |
A0A2Z6P0M1 | 5.7e-26 | 23.76 | DUF4283 domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_4083... | [more] |
A0A2N9GA96 | 7.4e-26 | 26.20 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24033 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |