Lag0001247 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0001247
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Retrotrans_gag domain-containing protein
Location	chr4: 27703663 .. 27707013 (-)
RNA-Seq Expression	Lag0001247
Synteny	Lag0001247

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTATAGAAGATCAAGCAACAGTACGTCAATGGTCAGAAAATGTACAACAAATCCACGGAGATTCTTTAGTAGAAAATGTTATTTCTCAATTTAAGGATGTCAGTTTTCCAGAAAGTCAATTAGAAGCAGTGAAACAGGCTTGGGAAAAATTAACTGTAGATAGGAAGGCTAAATTTACAAGCAAATATGGCTATCTAGCTCAGCTCATGTATGTACAAGTTAATTATTCTGTATTAAAAGCTTTGATTCGACATTGGGATCCAGCCTACAGATGTTTCACATTTGGCTCAATTGACATGACTCCTACAATAGAGGAATATCAATCCCTTCTGCATATGCCAACACGAACAGAGGTTGAAGCTTATTCTTACGATCAAGAGCTTACAATGAAAAGAGCATTATCTACTCTTTTGGGCAAGATTCGTACGAGCGACATTGAGAAACAAGTAAAGATAAAAGGAGAGAACACATGCCTACCCCTAGACTACATCCTTACTCTTCAACAAAAATTTGCAAATGAAGACAAGGAGTTAACTTTACTGGCATTGTGTATCTTTATGTTGTTTTGTTTCCTAAAGTATGTGGATATGTTGAGGAACGCGTGGTCAAGTTGTTTGCTAAGATAGAAATAGGAGTTGATCCCATTATTCCTGTATTGGCAGAAACTTTTCGTTCATTGAATTATTGCAGAACAAAAGGAACAGAAGATTTATAGGGTGTGCACCATTATTGTACATTTGGGTCCTTAGTCATGTGAAGTGTCACCGAATTCAAATGTCCAGAGATCAAATTTTCAAGTTCCTGGAATAAGCTGCGAAATCCCATTTCAGAGTTCGTGCAATCAGGTTGGAGTTCATCCTCCCCTGAAAGGAGCGCTTGGGAAGCCTTTTTCTCCGAACTAAAGGTAGAAGATGTAATGTGGAGAGCCCCTTGGATGTCAACTAGGCCAATGATCTATAAATTGGTAAATTTCAAAGTTTACCTCTTTTGGGTCCTTGGGGATGTATAGCCTATGCTCCTTATTGGTAGTAGCCAAATTTGGGTCCGACAATTCATCCCTGCTACGCATGAGTTGAAGGATTTCAATTTGCTTATGATAAAGGCTTCTGTAAAGATAGAATTCAGAAAATTGTGAAAGCATGGAAAATGATCACTAAAATCCAGAGTGGTCAGTTTCATGATGATACCACAGAGGCGTACAAAACATGGCATGCGAACAGAGCTAAAACCGTGCTTGTGTCACCAAAAATGAAAACCAAGATAAAACTTAATGCAAAGGTGATACCAGATCAACAGACAGAACAAGCACACGCGAAAAGGAATGTGATGAATTGAGAAAAACGAATTCATCATTGGTTCAAGAAAATGAAAGGTTGCAATTGGAGGTAAAGCAAGGTTTGTTGCGCAATGTTGAACTAGAAAAAGAGTTGAACCGATTAAAGGGCAGTGTTAGCAAACAAGAACAGTTAGAAAAAGAAATTTCAGCATTAGACACAGAGGCCCGCGACCTGAACAGAAGAATGCATCGATTAAGAAGGGATAATGAAGTCTCCCAAGCAACTCTCAAGTCAAGGAATGACCAAGTTTTGAAGCAACAATCTGAGATTGCCTCACTTCATGAGTTGATGAAAGAGCTCGAAGATTGCATTAGTTTGAGGAACCAAACGATTACTGAGGTAGAAGAAAAAAATGGAACGCTTGACGACCTACAATTAACGCTCAAGATTAGAGAAGATCAACTAGGGGACCTCATCAACGACAACAAGGGTCTAAGAGAGTCCGTTCAGTCACTTAATGTTCGCCTCGGTAAGTATCAGGATGCCACTGATAGATTAATGAAAGACTATACCTATTTAAAGGAGCAGTACGACAGATTAAGCGATGATTTTGGGTTTGCGAGACAGAACCACGCGACACTACGAAGTAAACGGAACATATGCTCACTCAGATTAGGAGAGTCACTCGAAGGGCAGATGAACTAGCAGAAGATGCACGTACTCTCTCTAAAGTCATAGCACCTACACAGCCGAATAGCAAGAATGTGCTCAAGTTTCTGGGAAAACTTCGTATAAGTTTAGAGTATTGGGGGCAATTTTATTAACTCTTTACTTTAGTTTATGTTTTATTTAGATAGTTGAAATATCTTGTAATTCAATTTTGCACAAATTTTGCTGCTACATTGTTTTATCATTTTCCAATTTAATATCAAAGCCATTTTTTCCTTCTCTTCTATCACTTTTTTTTTTCGTTTTGTCTTTCTCTTTTCTTACACTAAAATCTCTTTTCATTAAAAATATAAACAGAATCATAAGATAGCTCGGTCACCTCGAATCCACCGCACCTACGTCACAAGATACAGGACAAGGATCATGGAAGAGCAGAGTACTGAGATGGAGAAAACAAGGAAAGATATTGAGGAGTTACGAGAAAAAATGGATGCATTCTTGTCGCCCTAGAAAGAGGCAAAATAATACCTGATATTGCTCAGTCCAGCCATACAATGAACGACCCTCCAATCCGGCAATCAACAGAGGGTACTACTCCAAAATATCATCCATTGTACAATATTCCAGTAGAGCAGCACCCGTTTCCATTTTTCAAGAATGAGCAAGTGCCTGTACACAATCAACCTGGATTTTCACTACCCACAGAGATACCTCCCAAGGTGACCATTACAGTTCCCAATTTAGATGATCCTGAAATCAGAAAAGAGCTAACGGGAGGTGAGAAAGTCTCTTCTAGTGAAAACTTGAAGTCCTGGAGGAAAGATTAAGGGCAGTAGAAGGAACAGACGTCTTCGAAATATAGATGCGACCAAGCTATGCTTGGTACCAGATGTAATCCTCCCTCCAAAATTCAAGGTGCCCGAGTTTGAAAAGTATGATGGAGCATCCTGCCCTAAAAACCATCTCATCATGTATTGCAGGAAGATGGCAGCATACGTCCAAAATGACAAACTGTTAATTCACTGCTTCCAGGACAGTCTTATTGGTCCAGCATCTCGATGGTATATGCAATTAGACAGCACTCATATATGTTCATGGAAGAATCTAGCCGATTCATTTTTAAAGCAATATAAGCACAACATAGATATGGCTCCTGACCGCCTAGACCTCCAGAGGATGGAAAAGAAGAGCACAGAAAGCTTTAAAGAGTATGCCCAAAGGTGGAGGGATACTGCTGCTCAGGTGCAACCACCTTTAGCAGATAAGGAGCTGTCAACCATGTTTATTAATACTCTCAAATCTCCTTTCTATGATAAGATGATTGGGAGTGCCTCTACCAATTTCTCTGACATAATGACAATTGGAGAGAGAATCAGTACGAAATTAAGCATGGAAAGATAA

mRNA sequence

ATGGGTATAGAAGATCAAGCAACAGTACGTCAATGGTCAGAAAATGTACAACAAATCCACGGAGATTCTTTAGTAGAAAATGTTATTTCTCAATTTAAGGATGTCAGTTTTCCAGAAAGTCAATTAGAAGCAGTGAAACAGGCTTGGGAAAAATTAACTGTAGATAGGAAGGCTAAATTTACAAGCAAATATGGCTATCTAGCTCAGCTCATGTATGTACAAGTTAATTATTCTGTATTAAAAGCTTTGATTCGACATTGGGATCCAGCCTACAGATGTTTCACATTTGGCTCAATTGACATGACTCCTACAATAGAGGAATATCAATCCCTTCTGCATATGCCAACACGAACAGAGGTTGAAGCTTATTCTTACGATCAAGAGCTTACAATGAAAAGAGCATTATCTACTCTTTTGGGCAAGATTCGTACGAGCGACATTGAGAAACAAGTAAAGATAAAAGGAGAGAACACATGCCTACCCCTAGACTACATCCTTACTCTTCAACAAAAATTTGCAAATGAAGACAAGGAGTTAACTTTACTGGCATTGTGTATCTTTATGTTGTTTTGTTTCCTAAATGTCACCGAATTCAAATGTCCAGAGATCAAATTTTCAAGTTCCTGGAATAAGCTGCGAAATCCCATTTCAGAGTTCGTGCAATCAGGTTGGAGTTCATCCTCCCCTGAAAGGAGCGCTTGGGAAGCCTTTTTCTCCGAACTAAAGAGTGGTCAGTTTCATGATGATACCACAGAGGCGTACAAAACATGGCATGCGAACAGAGCTAAAACCGTGCTTGTGTCACCAAAAATGAAAACCAAGATAAAACTTAATGCAAAGGTAAAGCAAGGTTTGTTGCGCAATGTTGAACTAGAAAAAGAGTTGAACCGATTAAAGGGCAGTGTTAGCAAACAAGAACAGTTAGAAAAAGAAATTTCAGCATTAGACACAGAGGCCCGCGACCTGAACAGAAGAATGCATCGATTAAGAAGGGATAATGAAGTCTCCCAAGCAACTCTCAAGTCAAGGAATGACCAAGTTTTGAAGCAACAATCTGAGATTGCCTCACTTCATGAGTTGATGAAAGAGCTCGAAGATTGCATTAGTTTGAGGAACCAAACGATTACTGAGGTAGAAGAAAAAAATGGAACGCTTGACGACCTACAATTAACGCTCAAGATTAGAGAAGATCAACTAGGGGACCTCATCAACGACAACAAGGGTCTAAGAGAGTCCGTTCAGTCACTTAATGTTCGCCTCGGTAAGTATCAGGATGCCACTGATAGATTAATGAAAGACTATACCTATTTAAAGGAGCAGTACGACAGATTAAGCGATGATTTTGGGTTTGCGAGACAGAACCACGCGACACTACGAAAAAGAGGCAAAATAATACCTGATATTGCTCAGTCCAGCCATACAATGAACGACCCTCCAATCCGGCAATCAACAGAGGGTACTACTCCAAAATATCATCCATTGTACAATATTCCAGTAGAGCAGCACCCGTTTCCATTTTTCAAGAATGAGCAAGTGCCTGTACACAATCAACCTGGATTTTCACTACCCACAGAGATACCTCCCAAGGTGACCATTACAGTTCCCAATTTAGATGATCCTGAAATCAGAAAAGAGCTAACGGGAGATGCGACCAAGCTATGCTTGGTACCAGATGTAATCCTCCCTCCAAAATTCAAGGTGCCCGAGTTTGAAAAGTATGATGGAGCATCCTGCCCTAAAAACCATCTCATCATGTATTGCAGGAAGATGGCAGCATACGTCCAAAATGACAAACTGTTAATTCACTGCTTCCAGGACAGTCTTATTGGTCCAGCATCTCGATGGTATATGCAATTAGACAGCACTCATATATGTTCATGGAAGAATCTAGCCGATTCATTTTTAAAGCAATATAAGCACAACATAGATATGGCTCCTGACCGCCTAGACCTCCAGAGGATGGAAAAGAAGAGCACAGAAAGCTTTAAAGAGTATGCCCAAAGGTGGAGGGATACTGCTGCTCAGGTGCAACCACCTTTAGCAGATAAGGAGCTGTCAACCATGTTTATTAATACTCTCAAATCTCCTTTCTATGATAAGATGATTGGGAGTGCCTCTACCAATTTCTCTGACATAATGACAATTGGAGAGAGAATCAGTACGAAATTAAGCATGGAAAGATAA

Coding sequence (CDS)

ATGGGTATAGAAGATCAAGCAACAGTACGTCAATGGTCAGAAAATGTACAACAAATCCACGGAGATTCTTTAGTAGAAAATGTTATTTCTCAATTTAAGGATGTCAGTTTTCCAGAAAGTCAATTAGAAGCAGTGAAACAGGCTTGGGAAAAATTAACTGTAGATAGGAAGGCTAAATTTACAAGCAAATATGGCTATCTAGCTCAGCTCATGTATGTACAAGTTAATTATTCTGTATTAAAAGCTTTGATTCGACATTGGGATCCAGCCTACAGATGTTTCACATTTGGCTCAATTGACATGACTCCTACAATAGAGGAATATCAATCCCTTCTGCATATGCCAACACGAACAGAGGTTGAAGCTTATTCTTACGATCAAGAGCTTACAATGAAAAGAGCATTATCTACTCTTTTGGGCAAGATTCGTACGAGCGACATTGAGAAACAAGTAAAGATAAAAGGAGAGAACACATGCCTACCCCTAGACTACATCCTTACTCTTCAACAAAAATTTGCAAATGAAGACAAGGAGTTAACTTTACTGGCATTGTGTATCTTTATGTTGTTTTGTTTCCTAAATGTCACCGAATTCAAATGTCCAGAGATCAAATTTTCAAGTTCCTGGAATAAGCTGCGAAATCCCATTTCAGAGTTCGTGCAATCAGGTTGGAGTTCATCCTCCCCTGAAAGGAGCGCTTGGGAAGCCTTTTTCTCCGAACTAAAGAGTGGTCAGTTTCATGATGATACCACAGAGGCGTACAAAACATGGCATGCGAACAGAGCTAAAACCGTGCTTGTGTCACCAAAAATGAAAACCAAGATAAAACTTAATGCAAAGGTAAAGCAAGGTTTGTTGCGCAATGTTGAACTAGAAAAAGAGTTGAACCGATTAAAGGGCAGTGTTAGCAAACAAGAACAGTTAGAAAAAGAAATTTCAGCATTAGACACAGAGGCCCGCGACCTGAACAGAAGAATGCATCGATTAAGAAGGGATAATGAAGTCTCCCAAGCAACTCTCAAGTCAAGGAATGACCAAGTTTTGAAGCAACAATCTGAGATTGCCTCACTTCATGAGTTGATGAAAGAGCTCGAAGATTGCATTAGTTTGAGGAACCAAACGATTACTGAGGTAGAAGAAAAAAATGGAACGCTTGACGACCTACAATTAACGCTCAAGATTAGAGAAGATCAACTAGGGGACCTCATCAACGACAACAAGGGTCTAAGAGAGTCCGTTCAGTCACTTAATGTTCGCCTCGGTAAGTATCAGGATGCCACTGATAGATTAATGAAAGACTATACCTATTTAAAGGAGCAGTACGACAGATTAAGCGATGATTTTGGGTTTGCGAGACAGAACCACGCGACACTACGAAAAAGAGGCAAAATAATACCTGATATTGCTCAGTCCAGCCATACAATGAACGACCCTCCAATCCGGCAATCAACAGAGGGTACTACTCCAAAATATCATCCATTGTACAATATTCCAGTAGAGCAGCACCCGTTTCCATTTTTCAAGAATGAGCAAGTGCCTGTACACAATCAACCTGGATTTTCACTACCCACAGAGATACCTCCCAAGGTGACCATTACAGTTCCCAATTTAGATGATCCTGAAATCAGAAAAGAGCTAACGGGAGATGCGACCAAGCTATGCTTGGTACCAGATGTAATCCTCCCTCCAAAATTCAAGGTGCCCGAGTTTGAAAAGTATGATGGAGCATCCTGCCCTAAAAACCATCTCATCATGTATTGCAGGAAGATGGCAGCATACGTCCAAAATGACAAACTGTTAATTCACTGCTTCCAGGACAGTCTTATTGGTCCAGCATCTCGATGGTATATGCAATTAGACAGCACTCATATATGTTCATGGAAGAATCTAGCCGATTCATTTTTAAAGCAATATAAGCACAACATAGATATGGCTCCTGACCGCCTAGACCTCCAGAGGATGGAAAAGAAGAGCACAGAAAGCTTTAAAGAGTATGCCCAAAGGTGGAGGGATACTGCTGCTCAGGTGCAACCACCTTTAGCAGATAAGGAGCTGTCAACCATGTTTATTAATACTCTCAAATCTCCTTTCTATGATAAGATGATTGGGAGTGCCTCTACCAATTTCTCTGACATAATGACAATTGGAGAGAGAATCAGTACGAAATTAAGCATGGAAAGATAA

Protein sequence

MGIEDQATVRQWSENVQQIHGDSLVENVISQFKDVSFPESQLEAVKQAWEKLTVDRKAKFTSKYGYLAQLMYVQVNYSVLKALIRHWDPAYRCFTFGSIDMTPTIEEYQSLLHMPTRTEVEAYSYDQELTMKRALSTLLGKIRTSDIEKQVKIKGENTCLPLDYILTLQQKFANEDKELTLLALCIFMLFCFLNVTEFKCPEIKFSSSWNKLRNPISEFVQSGWSSSSPERSAWEAFFSELKSGQFHDDTTEAYKTWHANRAKTVLVSPKMKTKIKLNAKVKQGLLRNVELEKELNRLKGSVSKQEQLEKEISALDTEARDLNRRMHRLRRDNEVSQATLKSRNDQVLKQQSEIASLHELMKELEDCISLRNQTITEVEEKNGTLDDLQLTLKIREDQLGDLINDNKGLRESVQSLNVRLGKYQDATDRLMKDYTYLKEQYDRLSDDFGFARQNHATLRKRGKIIPDIAQSSHTMNDPPIRQSTEGTTPKYHPLYNIPVEQHPFPFFKNEQVPVHNQPGFSLPTEIPPKVTITVPNLDDPEIRKELTGDATKLCLVPDVILPPKFKVPEFEKYDGASCPKNHLIMYCRKMAAYVQNDKLLIHCFQDSLIGPASRWYMQLDSTHICSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKSTESFKEYAQRWRDTAAQVQPPLADKELSTMFINTLKSPFYDKMIGSASTNFSDIMTIGERISTKLSMER

Homology

[Close]

BLAST of Lag0001247 vs. NCBI nr
Match: KAA0036933.1 (uncharacterized protein E6C27_scaffold86G00060 [Cucumis melo var. makuwa])

HSP 1 Score: 424.9 bits (1091), Expect = 1.4e-114
Identity = 290/863 (33.60%), Postives = 423/863 (49.02%), Query Frame = 0


Query: 49  WEKLTVDRKAKFTSKYGYLAQLMYVQVNYSVLKALIRHWDPAYRCFTFGSIDMTPTIEEY 108
           WE LT  R+  F+ KYG++A+LMY+ VNY  L+A+I   DPAY CFTFGS D+ PTIEEY
Sbjct: 3   WEALTPQRRFMFSKKYGHIAELMYIPVNYFALRAIINFGDPAYGCFTFGSCDLLPTIEEY 62

Query: 109 QSLLHMPTRTEVEAYSYDQELTMKRALSTLLGKIRTSDIEKQVKIKGENTCLPLDYILTL 168
           Q++L MP +     Y ++ + T KR LS  L  +  ++I+K +K KG    +P DY++ +
Sbjct: 63  QAMLSMPQKEREIVYFFNPKQTTKRTLSKFLETVHATEIQKYIKAKGGEENVPFDYLIKM 122

Query: 169 QQKFANEDKELTLLALCIF----------------------------------------- 228
            Q + +EDK LTLLALCI+                                         
Sbjct: 123 TQTYIDEDKGLTLLALCIYGAVIFPKAEGYVDRKVIKLFFQMERGVNPIIPILAETFRSL 182

Query: 229 ------------------------MLFCFLN-----VTEFKCPEIKFSSSWNKLRNPISE 288
                                   +L+ +++       EF+CP + FSS WN +RN ISE
Sbjct: 183 NYCRNKGEGKLNCCVRGKLNCCVPLLYIWIHSHIKFPAEFRCPRLDFSSPWNLMRNTISE 242

Query: 289 FVQSGWSSSSPERSAWEAFFSELKS-------------------GQFH------------ 348
           F  + W  + P + AW +FF++L S                   G FH            
Sbjct: 243 FGMAVWDPTYPRKEAWLSFFAKLTSENVIWKAQWMPLKAVIYRCGDFHSVPLLGPWGGVN 302

Query: 349 ------------------------------DDTTEAYKTWHANRAKTVL----------- 408
                                         +  T  Y+ W ANR K ++           
Sbjct: 303 YTPLLVLRQVWLKQFIPPTHNLKIKDKGHYEGVTSGYEAWQANRRKNIIDISREVVERGK 362

Query: 409 --------------VSPKMKTKI------KLNAKVKQGLLRNVELEKELNRLKGSVSKQE 468
                         +  + K ++      KL  +  Q +     L+ EL + K  +  Q+
Sbjct: 363 ETSFEQPNQWIEKSIELEQKNRLLEQENEKLRKETSQWMDHATYLQNELEKTKSFLKNQD 422

Query: 469 QLEKEISALDTEARDLNRRMHRLRRDNEVSQATL--------KSRNDQVLKQQSEIASLH 528
           +LE ++  LD E R +N+    ++ +    QAT+        +S   ++LK  ++   LH
Sbjct: 423 KLETDLETLDKEMRRMNKANRSMKNEKTTLQATVGLHLKMAERSEEYKILKNYADF--LH 482

Query: 529 ELMKELEDCISLRNQTITEVEEKNGTLDDLQLTL---------KIREDQLGDLINDNKGL 588
             +  L++     ++ IT+  E   T D +Q+ +         ++  +++   I   + +
Sbjct: 483 YQLTALQN----SSKRITQEYESLNT-DYVQMKVDYDLHTRDFQVLVERVDQTIEFLRMV 542

Query: 589 RESVQSLNVRLGKYQDATD-RLMKDYTYLKEQYDRLSDDFGFARQNHATLRK-------- 648
            +         GKY   T  R   +  Y  +  +    D    RQ    L +        
Sbjct: 543 SKRANGFAEWAGKYSSFTPIRHPYNTRYKSQIMEEKDKDMDKMRQEINNLGEQVSKILEL 602

Query: 649 ----RGKIIPDIAQSSHTMNDPPIRQSTEGTTPKYHPLYNIPVEQHPFPFFKNEQVPVHN 708
               +GK   D  QSS+ + D        G TP YH   N+P  +     F    + + +
Sbjct: 603 LSMGKGKAAVDTTQSSNPIQDTDDPIYPPGFTP-YH--INVPRLKPLNTMF----LRIRS 662

Query: 709 QPGFSLPTEIPPKVTITVPNLDDPEIRKELTGDATKLCLVPDVILPPKFKVPEFEKYDGA 720
           +    +  E        +  +++ ++   +  DAT+LCLVP +I+P KFKVPEF KYDG+
Sbjct: 663 KQKLDVLEE-------RLRAIEETDVYGNI--DATQLCLVPGLIIPAKFKVPEFNKYDGS 722

[Close]

BLAST of Lag0001247 vs. NCBI nr
Match: KAA0033221.1 (uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa])

HSP 1 Score: 379.4 bits (973), Expect = 6.9e-101
Identity = 284/876 (32.42%), Postives = 421/876 (48.06%), Query Frame = 0


Query: 9   VRQWSENVQQIHGDS---LVENVISQFKDVSFPESQLEAVKQAWEKLTVDRKAKFTSKYG 68
           V QWSE+ Q   G S    +E  + +   + F  + LE +K  WE L  +++AKF   YG
Sbjct: 23  VSQWSEHFQLESGLSWPKKLEVPLPKTCQLGFINNNLEELKSLWESLMPEQRAKFIKAYG 82

Query: 69  YLAQLMYVQVNYSVLKALIRHWDPAYRCFTFGSIDMTPTIEEYQSLLHMPTRTEVEAYSY 128
            +  L+Y  +N S L+AL   WDP  +CFTF + D+TPTIEEYQ+L+ +P     + Y Y
Sbjct: 83  SIGDLLYTTINTSTLQALSHFWDPVLKCFTFNTFDLTPTIEEYQALISLPVDRGNKLYIY 142

Query: 129 DQELTMKRALSTLLGKIRTSDIEKQVKIKGENTCLPLDYILTLQQKFANEDKELTLLALC 188
            ++LT++R+LS  +G I  S+++KQ+K K    C+P++Y++ L +      K L+L+ALC
Sbjct: 143 HRKLTLQRSLSKFMGDIHASELKKQMKTKEGRNCIPINYLINLARGCLLGKKGLSLIALC 202

Query: 189 IF---------------------------------------------------------M 248
           I+                                                         M
Sbjct: 203 IYGTVIFPRIKGYVEEEVVKIFVGIERGVNPVIPIMAETFRSLNHCRIQGKGKFFSCAPM 262

Query: 249 LFCFLN-----VTEFKCPEIKFSSSWNKLRNPISEFVQSGWSSSSPERSA---------- 308
           LF +++        F  P+IKF+S WNK RN I EF  + W    PE  A          
Sbjct: 263 LFIWISSHLRYPNNFGYPQIKFNSPWNKTRNTIREFNSAHWDPKDPEFGAYGGGIAYSPL 322

Query: 309 --------------------WE-------------------AFFSELKSGQFHDDTTEAY 368
                               WE                    F  ++KS +  + TTE Y
Sbjct: 323 LVLRQSWSKQFAPVVCGLEDWEFSYESNIANDKIHEAVEAWKFVKKMKSLRHCEGTTEQY 382

Query: 369 KTWHANRAKTVLVSPKMKTKIKLNAKVKQGLLRNVEL------EKELNRLKGS----VSK 428
             W A+R   + ++P           + + L+ N+EL      EKEL RL+       ++
Sbjct: 383 DNWRASR-NGITMNP-----------MSESLVPNIELKKYHDKEKELKRLREMNCVLATE 442

Query: 429 QEQLEKEISALDTEARDLNRRMHRLRRDN-------EVSQATLKSRNDQVLKQQSEIASL 488
            E+L +E+     +A +  R +   +R         EV Q +++    Q+++ +S+   L
Sbjct: 443 NEKLREEVKKWVQQAVNTPRDLDEAKRKRLETAMGIEVLQHSIEEYKSQLIEAESKNNFL 502

Query: 489 HELMKELED----CISLRN-------QTITEVEEKNGTL----DDLQLTLKIREDQLGDL 548
            + +   E     C   R        Q I + +E +       D+ +   +  +D +G +
Sbjct: 503 QKAVNSSESQLLICRKAREVITDDYAQLIEKYQEMSIDFMMWKDEYETLRRKYDDAIGRM 562

Query: 549 INDNKGLRE--------SVQSLNVRLGKYQDA-TDRLMKDYTYLKEQYDRLSDDFGFARQ 608
               + LR+        SVQ+  +R G      TD+ +  +  +  Q   L  D    + 
Sbjct: 563 ERGAEKLRQMARVADQFSVQARTLRQGVIPTRDTDKELSHFLGIIGQCLGLRQDVEGLKD 622

Query: 609 NHATLRK-----RGKIIPDIAQS-----SHTMNDPPIRQSTEGTTPKYHPLYNIPVEQHP 668
             A + +     RGK +   +       +  + D P      G TP+      +    +P
Sbjct: 623 QLAKILELLTTGRGKSVVGTSSQVEVDLNQVLEDMP--AYPPGFTPQRSSSPRMGDRTYP 682

Query: 669 FPFFKNEQVPVHNQPGFSLPTEIPPKVTITVPNLDDPEIRKELTGDATKLCLVPDVILPP 720
             F      P  N P  +   E      I+   ++  +   E  G   +L  + + +   
Sbjct: 683 TSF------PAPN-PNTTTQQEAHANNPISTLIMEGGKKISEEQGSRRRLEFLEERLR-- 742

[Close]

BLAST of Lag0001247 vs. NCBI nr
Match: XP_022157796.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia])

HSP 1 Score: 337.4 bits (864), Expect = 3.0e-88
Identity = 183/300 (61.00%), Postives = 210/300 (70.00%), Query Frame = 0


Query: 460 KRGKIIPDIAQSSHTMND------------PPIRQSTEGTTPK---YHPLYNIPVEQHPF 519
           ++GK   D A SS+ +++            PP+R   EG  P+   Y+PLY++P+ Q+P 
Sbjct: 30  EKGKATADPATSSNPIHEPQETPPYPPGYGPPLRPVAEGFMPQYTTYNPLYDVPIGQYPH 89

Query: 520 PFFKN-EQVP---VHNQPG--FSLPT-----EIPPKVTITVPNLDDPEIRKELTG----- 579
            F K  +Q+P   +  +P    S PT       P K      N    E  + L       
Sbjct: 90  TFVKGAQQIPTNIIFREPEQMMSPPTVXNLGGXPAKTDPVXQNAXSXEKXEVLEERLRAI 149

Query: 580 ---------DATKLCLVPDVILPPKFKVPEFEKYDGASCPKNHLIMYCRKMAAYVQNDKL 639
                    DA++LCLV  +++PPKFKVPEFEKYDG+SCPKNHLIMYCRKM AYVQN KL
Sbjct: 150 EGTDVFGNIDASQLCLVSGLVIPPKFKVPEFEKYDGSSCPKNHLIMYCRKMXAYVQNXKL 209

Query: 640 LIHCFQDSLIGPASRWYMQLDSTHICSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKST 699
           LIHCFQDSL G ASRWYMQLDS+H+ SWKNLADSFLKQYKHNIDMAPDRLDLQRMEK ST
Sbjct: 210 LIHCFQDSLXGXASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKNST 269

Query: 700 ESFKEYAQRWRDTAAQVQPPLADKELSTMFINTLKSPFYDKMIGSASTNFSDIMTIGERI 720
           ESFKEYAQRWRDTAAQVQPPL DKELS MFINTLK PFYD+MIGSASTNFSDIMTIGERI
Sbjct: 270 ESFKEYAQRWRDTAAQVQPPLTDKELSAMFINTLKHPFYDRMIGSASTNFSDIMTIGERI 329

[Close]

BLAST of Lag0001247 vs. NCBI nr
Match: XP_031738551.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC101203611 [Cucumis sativus])

HSP 1 Score: 335.1 bits (858), Expect = 1.5e-87
Identity = 204/517 (39.46%), Postives = 298/517 (57.64%), Query Frame = 0


Query: 276 KLNAKVKQGLLRNVELEKELNRLKGSVSKQEQLEKEISALDTEARDLNRRMHRLRRDNEV 335
           KL  +  Q +     L++EL + K  +  Q++LEK +  LD E R +N+    L+ +  +
Sbjct: 144 KLQKETSQWIDHATFLQRELEKTKSFLKNQDKLEKNLEVLDEEMRRMNKSNRSLKNEKTI 203

Query: 336 SQATLKSRNDQVLKQQSEIASLHELMKELEDCISLRNQTITEVEEKNGTLDDLQLTLKIR 395
            QAT++S+++ +   ++      EL+ +L+  I  R   I ++E  N +L     +L ++
Sbjct: 204 LQATVESQDEYIKDLENMKEYYLELVNDLKSSIGKREAQIVDLEVHNCSLRQTVDSLHVK 263

Query: 396 EDQLGDLINDNKGLRESVQSLNVRLGKYQDATDRLMKDYTYLKEQYDRLSDDFGFARQNH 455
              + +   D K L+    SL+ +L  +Q++++R++++Y  LK  Y ++  D+   R++ 
Sbjct: 264 ---MVEHSEDYKILKNYADSLHHQLTAFQNSSERIVQEYKLLKTDYMQMKVDYDLQRRDF 323

Query: 456 ATLRKR------------------------------------------------------ 515
            TL +R                                                      
Sbjct: 324 QTLVERVDQTIGFLRIVSRRANGFAEWAADLRINFFSIRPHSDDLNRFLKMICRELGHFG 383

Query: 516 -GKIIPDIAQSSHTMNDPPIRQSTEGTTPKY---------------HPLYNIPVEQHPFP 575
            GK++ + AQSS+ + D        G TP++               +PL+++P    P P
Sbjct: 384 KGKVVVETAQSSNPVQDTDDPIYPPGFTPRHMNATQSQTAQHYVAMNPLFDVP---PPVP 443

Query: 576 FFKNEQVPVHNQP-GFSLPTEIPPKVTITVPNLDDPEIRKELTG--DATKLCLVPDVILP 635
             +  +     Q  G +  T    K+ +    L   E   ++ G  DAT+LCLVP +I+P
Sbjct: 444 DIEQLEAQAKIQDMGQNENTPAKQKLDVLEERLRAIE-GTDVYGNIDATQLCLVPGLIIP 503

Query: 636 PKFKVPEFEKYDGASCPKNHLIMYCRKMAAYVQNDKLLIHCFQDSLIGPASRWYMQLDST 695
            KFKVP F+KYDG+SCP++HLIMYCRKMAA++ NDKLLIHCFQDSL GPA+RWY+QLD+ 
Sbjct: 504 TKFKVPXFDKYDGSSCPRSHLIMYCRKMAAHIGNDKLLIHCFQDSLTGPATRWYIQLDNA 563

Query: 696 HICSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKSTESFKEYAQRWRDTAAQVQPPLAD 720
           HI  WK+LAD+FLKQYKHNIDMAPDRLDLQRMEKKS+ESFKEYAQRWRD AA+VQPPL D
Sbjct: 564 HIHVWKDLADAFLKQYKHNIDMAPDRLDLQRMEKKSSESFKEYAQRWRDIAAEVQPPLTD 623

[Close]

BLAST of Lag0001247 vs. NCBI nr
Match: XP_022147189.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia])

HSP 1 Score: 327.8 bits (839), Expect = 2.4e-85
Identity = 171/254 (67.32%), Postives = 194/254 (76.38%), Query Frame = 0


Query: 491 YHPLYNIPVEQHPFPFFKN-EQVP---VHNQPG--FSLPTEI--------PPKVTITVPN 550
           Y+PLY++PV Q+  PF K  +Q+P   +  +P    S PT +           V    P+
Sbjct: 7   YNPLYDVPVGQYLHPFVKGAQQIPTNIIFREPEQMMSPPTVLNLGDLLAKTDPVGQNAPS 66

Query: 551 LDDPEIRKELTG-----------DATKLCLVPDVILPPKFKVPEFEKYDGASCPKNHLIM 610
            +  E+ KE              DA++LC V  +++PPK KVPEFEKY+G+SCPKNHL M
Sbjct: 67  NEKFEVLKERLRAIERTDVFGNIDASQLCSVSGLVIPPKLKVPEFEKYNGSSCPKNHLXM 126

Query: 611 YCRKMAAYVQNDKLLIHCFQDSLIGPASRWYMQLDSTHICSWKNLADSFLKQYKHNIDMA 670
           YCRKMAAYVQNDKLLIHCFQDSL GPASRWYMQLDS+H+ SWKNLADSFLKQYKHNIDMA
Sbjct: 127 YCRKMAAYVQNDKLLIHCFQDSLSGPASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMA 186

Query: 671 PDRLDLQRMEKKSTESFKEYAQRWRDTAAQVQPPLADKELSTMFINTLKSPFYDKMIGSA 720
           PDRLDLQRMEKKST+SFKEYAQRWRDTAAQVQPPL DKELS MFINTLK PFYD+MIGSA
Sbjct: 187 PDRLDLQRMEKKSTKSFKEYAQRWRDTAAQVQPPLIDKELSAMFINTLKHPFYDRMIGSA 246

[Close]

BLAST of Lag0001247 vs. ExPASy TrEMBL
Match: A0A5A7T1W2 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00060 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 7.0e-115
Identity = 290/863 (33.60%), Postives = 423/863 (49.02%), Query Frame = 0


Query: 49  WEKLTVDRKAKFTSKYGYLAQLMYVQVNYSVLKALIRHWDPAYRCFTFGSIDMTPTIEEY 108
           WE LT  R+  F+ KYG++A+LMY+ VNY  L+A+I   DPAY CFTFGS D+ PTIEEY
Sbjct: 3   WEALTPQRRFMFSKKYGHIAELMYIPVNYFALRAIINFGDPAYGCFTFGSCDLLPTIEEY 62

Query: 109 QSLLHMPTRTEVEAYSYDQELTMKRALSTLLGKIRTSDIEKQVKIKGENTCLPLDYILTL 168
           Q++L MP +     Y ++ + T KR LS  L  +  ++I+K +K KG    +P DY++ +
Sbjct: 63  QAMLSMPQKEREIVYFFNPKQTTKRTLSKFLETVHATEIQKYIKAKGGEENVPFDYLIKM 122

Query: 169 QQKFANEDKELTLLALCIF----------------------------------------- 228
            Q + +EDK LTLLALCI+                                         
Sbjct: 123 TQTYIDEDKGLTLLALCIYGAVIFPKAEGYVDRKVIKLFFQMERGVNPIIPILAETFRSL 182

Query: 229 ------------------------MLFCFLN-----VTEFKCPEIKFSSSWNKLRNPISE 288
                                   +L+ +++       EF+CP + FSS WN +RN ISE
Sbjct: 183 NYCRNKGEGKLNCCVRGKLNCCVPLLYIWIHSHIKFPAEFRCPRLDFSSPWNLMRNTISE 242

Query: 289 FVQSGWSSSSPERSAWEAFFSELKS-------------------GQFH------------ 348
           F  + W  + P + AW +FF++L S                   G FH            
Sbjct: 243 FGMAVWDPTYPRKEAWLSFFAKLTSENVIWKAQWMPLKAVIYRCGDFHSVPLLGPWGGVN 302

Query: 349 ------------------------------DDTTEAYKTWHANRAKTVL----------- 408
                                         +  T  Y+ W ANR K ++           
Sbjct: 303 YTPLLVLRQVWLKQFIPPTHNLKIKDKGHYEGVTSGYEAWQANRRKNIIDISREVVERGK 362

Query: 409 --------------VSPKMKTKI------KLNAKVKQGLLRNVELEKELNRLKGSVSKQE 468
                         +  + K ++      KL  +  Q +     L+ EL + K  +  Q+
Sbjct: 363 ETSFEQPNQWIEKSIELEQKNRLLEQENEKLRKETSQWMDHATYLQNELEKTKSFLKNQD 422

Query: 469 QLEKEISALDTEARDLNRRMHRLRRDNEVSQATL--------KSRNDQVLKQQSEIASLH 528
           +LE ++  LD E R +N+    ++ +    QAT+        +S   ++LK  ++   LH
Sbjct: 423 KLETDLETLDKEMRRMNKANRSMKNEKTTLQATVGLHLKMAERSEEYKILKNYADF--LH 482

Query: 529 ELMKELEDCISLRNQTITEVEEKNGTLDDLQLTL---------KIREDQLGDLINDNKGL 588
             +  L++     ++ IT+  E   T D +Q+ +         ++  +++   I   + +
Sbjct: 483 YQLTALQN----SSKRITQEYESLNT-DYVQMKVDYDLHTRDFQVLVERVDQTIEFLRMV 542

Query: 589 RESVQSLNVRLGKYQDATD-RLMKDYTYLKEQYDRLSDDFGFARQNHATLRK-------- 648
            +         GKY   T  R   +  Y  +  +    D    RQ    L +        
Sbjct: 543 SKRANGFAEWAGKYSSFTPIRHPYNTRYKSQIMEEKDKDMDKMRQEINNLGEQVSKILEL 602

Query: 649 ----RGKIIPDIAQSSHTMNDPPIRQSTEGTTPKYHPLYNIPVEQHPFPFFKNEQVPVHN 708
               +GK   D  QSS+ + D        G TP YH   N+P  +     F    + + +
Sbjct: 603 LSMGKGKAAVDTTQSSNPIQDTDDPIYPPGFTP-YH--INVPRLKPLNTMF----LRIRS 662

Query: 709 QPGFSLPTEIPPKVTITVPNLDDPEIRKELTGDATKLCLVPDVILPPKFKVPEFEKYDGA 720
           +    +  E        +  +++ ++   +  DAT+LCLVP +I+P KFKVPEF KYDG+
Sbjct: 663 KQKLDVLEE-------RLRAIEETDVYGNI--DATQLCLVPGLIIPAKFKVPEFNKYDGS 722

[Close]

BLAST of Lag0001247 vs. ExPASy TrEMBL
Match: A0A5A7SUT0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold845G00100 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 3.4e-101
Identity = 284/876 (32.42%), Postives = 421/876 (48.06%), Query Frame = 0


Query: 9   VRQWSENVQQIHGDS---LVENVISQFKDVSFPESQLEAVKQAWEKLTVDRKAKFTSKYG 68
           V QWSE+ Q   G S    +E  + +   + F  + LE +K  WE L  +++AKF   YG
Sbjct: 23  VSQWSEHFQLESGLSWPKKLEVPLPKTCQLGFINNNLEELKSLWESLMPEQRAKFIKAYG 82

Query: 69  YLAQLMYVQVNYSVLKALIRHWDPAYRCFTFGSIDMTPTIEEYQSLLHMPTRTEVEAYSY 128
            +  L+Y  +N S L+AL   WDP  +CFTF + D+TPTIEEYQ+L+ +P     + Y Y
Sbjct: 83  SIGDLLYTTINTSTLQALSHFWDPVLKCFTFNTFDLTPTIEEYQALISLPVDRGNKLYIY 142

Query: 129 DQELTMKRALSTLLGKIRTSDIEKQVKIKGENTCLPLDYILTLQQKFANEDKELTLLALC 188
            ++LT++R+LS  +G I  S+++KQ+K K    C+P++Y++ L +      K L+L+ALC
Sbjct: 143 HRKLTLQRSLSKFMGDIHASELKKQMKTKEGRNCIPINYLINLARGCLLGKKGLSLIALC 202

Query: 189 IF---------------------------------------------------------M 248
           I+                                                         M
Sbjct: 203 IYGTVIFPRIKGYVEEEVVKIFVGIERGVNPVIPIMAETFRSLNHCRIQGKGKFFSCAPM 262

Query: 249 LFCFLN-----VTEFKCPEIKFSSSWNKLRNPISEFVQSGWSSSSPERSA---------- 308
           LF +++        F  P+IKF+S WNK RN I EF  + W    PE  A          
Sbjct: 263 LFIWISSHLRYPNNFGYPQIKFNSPWNKTRNTIREFNSAHWDPKDPEFGAYGGGIAYSPL 322

Query: 309 --------------------WE-------------------AFFSELKSGQFHDDTTEAY 368
                               WE                    F  ++KS +  + TTE Y
Sbjct: 323 LVLRQSWSKQFAPVVCGLEDWEFSYESNIANDKIHEAVEAWKFVKKMKSLRHCEGTTEQY 382

Query: 369 KTWHANRAKTVLVSPKMKTKIKLNAKVKQGLLRNVEL------EKELNRLKGS----VSK 428
             W A+R   + ++P           + + L+ N+EL      EKEL RL+       ++
Sbjct: 383 DNWRASR-NGITMNP-----------MSESLVPNIELKKYHDKEKELKRLREMNCVLATE 442

Query: 429 QEQLEKEISALDTEARDLNRRMHRLRRDN-------EVSQATLKSRNDQVLKQQSEIASL 488
            E+L +E+     +A +  R +   +R         EV Q +++    Q+++ +S+   L
Sbjct: 443 NEKLREEVKKWVQQAVNTPRDLDEAKRKRLETAMGIEVLQHSIEEYKSQLIEAESKNNFL 502

Query: 489 HELMKELED----CISLRN-------QTITEVEEKNGTL----DDLQLTLKIREDQLGDL 548
            + +   E     C   R        Q I + +E +       D+ +   +  +D +G +
Sbjct: 503 QKAVNSSESQLLICRKAREVITDDYAQLIEKYQEMSIDFMMWKDEYETLRRKYDDAIGRM 562

Query: 549 INDNKGLRE--------SVQSLNVRLGKYQDA-TDRLMKDYTYLKEQYDRLSDDFGFARQ 608
               + LR+        SVQ+  +R G      TD+ +  +  +  Q   L  D    + 
Sbjct: 563 ERGAEKLRQMARVADQFSVQARTLRQGVIPTRDTDKELSHFLGIIGQCLGLRQDVEGLKD 622

Query: 609 NHATLRK-----RGKIIPDIAQS-----SHTMNDPPIRQSTEGTTPKYHPLYNIPVEQHP 668
             A + +     RGK +   +       +  + D P      G TP+      +    +P
Sbjct: 623 QLAKILELLTTGRGKSVVGTSSQVEVDLNQVLEDMP--AYPPGFTPQRSSSPRMGDRTYP 682

Query: 669 FPFFKNEQVPVHNQPGFSLPTEIPPKVTITVPNLDDPEIRKELTGDATKLCLVPDVILPP 720
             F      P  N P  +   E      I+   ++  +   E  G   +L  + + +   
Sbjct: 683 TSF------PAPN-PNTTTQQEAHANNPISTLIMEGGKKISEEQGSRRRLEFLEERLR-- 742

[Close]

BLAST of Lag0001247 vs. ExPASy TrEMBL
Match: A0A6J1DZ90 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111024415 PE=4 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 1.5e-88
Identity = 183/300 (61.00%), Postives = 210/300 (70.00%), Query Frame = 0


Query: 460 KRGKIIPDIAQSSHTMND------------PPIRQSTEGTTPK---YHPLYNIPVEQHPF 519
           ++GK   D A SS+ +++            PP+R   EG  P+   Y+PLY++P+ Q+P 
Sbjct: 30  EKGKATADPATSSNPIHEPQETPPYPPGYGPPLRPVAEGFMPQYTTYNPLYDVPIGQYPH 89

Query: 520 PFFKN-EQVP---VHNQPG--FSLPT-----EIPPKVTITVPNLDDPEIRKELTG----- 579
            F K  +Q+P   +  +P    S PT       P K      N    E  + L       
Sbjct: 90  TFVKGAQQIPTNIIFREPEQMMSPPTVXNLGGXPAKTDPVXQNAXSXEKXEVLEERLRAI 149

Query: 580 ---------DATKLCLVPDVILPPKFKVPEFEKYDGASCPKNHLIMYCRKMAAYVQNDKL 639
                    DA++LCLV  +++PPKFKVPEFEKYDG+SCPKNHLIMYCRKM AYVQN KL
Sbjct: 150 EGTDVFGNIDASQLCLVSGLVIPPKFKVPEFEKYDGSSCPKNHLIMYCRKMXAYVQNXKL 209

Query: 640 LIHCFQDSLIGPASRWYMQLDSTHICSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKST 699
           LIHCFQDSL G ASRWYMQLDS+H+ SWKNLADSFLKQYKHNIDMAPDRLDLQRMEK ST
Sbjct: 210 LIHCFQDSLXGXASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKNST 269

Query: 700 ESFKEYAQRWRDTAAQVQPPLADKELSTMFINTLKSPFYDKMIGSASTNFSDIMTIGERI 720
           ESFKEYAQRWRDTAAQVQPPL DKELS MFINTLK PFYD+MIGSASTNFSDIMTIGERI
Sbjct: 270 ESFKEYAQRWRDTAAQVQPPLTDKELSAMFINTLKHPFYDRMIGSASTNFSDIMTIGERI 329

[Close]

BLAST of Lag0001247 vs. ExPASy TrEMBL
Match: A0A6J1D099 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111016200 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 1.2e-85
Identity = 171/254 (67.32%), Postives = 194/254 (76.38%), Query Frame = 0


Query: 491 YHPLYNIPVEQHPFPFFKN-EQVP---VHNQPG--FSLPTEI--------PPKVTITVPN 550
           Y+PLY++PV Q+  PF K  +Q+P   +  +P    S PT +           V    P+
Sbjct: 7   YNPLYDVPVGQYLHPFVKGAQQIPTNIIFREPEQMMSPPTVLNLGDLLAKTDPVGQNAPS 66

Query: 551 LDDPEIRKELTG-----------DATKLCLVPDVILPPKFKVPEFEKYDGASCPKNHLIM 610
            +  E+ KE              DA++LC V  +++PPK KVPEFEKY+G+SCPKNHL M
Sbjct: 67  NEKFEVLKERLRAIERTDVFGNIDASQLCSVSGLVIPPKLKVPEFEKYNGSSCPKNHLXM 126

Query: 611 YCRKMAAYVQNDKLLIHCFQDSLIGPASRWYMQLDSTHICSWKNLADSFLKQYKHNIDMA 670
           YCRKMAAYVQNDKLLIHCFQDSL GPASRWYMQLDS+H+ SWKNLADSFLKQYKHNIDMA
Sbjct: 127 YCRKMAAYVQNDKLLIHCFQDSLSGPASRWYMQLDSSHVGSWKNLADSFLKQYKHNIDMA 186

Query: 671 PDRLDLQRMEKKSTESFKEYAQRWRDTAAQVQPPLADKELSTMFINTLKSPFYDKMIGSA 720
           PDRLDLQRMEKKST+SFKEYAQRWRDTAAQVQPPL DKELS MFINTLK PFYD+MIGSA
Sbjct: 187 PDRLDLQRMEKKSTKSFKEYAQRWRDTAAQVQPPLIDKELSAMFINTLKHPFYDRMIGSA 246

[Close]

BLAST of Lag0001247 vs. ExPASy TrEMBL
Match: A0A6J1E2J7 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111025431 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 3.4e-85
Identity = 153/171 (89.47%), Postives = 164/171 (95.91%), Query Frame = 0


Query: 549 DATKLCLVPDVILPPKFKVPEFEKYDGASCPKNHLIMYCRKMAAYVQNDKLLIHCFQDSL 608
           DA++LCLV  +++PPKFKVPEFEKYDG+SCPKNHLIMYCRKMAAYVQNDKLLIHCFQDSL
Sbjct: 50  DASQLCLVSGLVIPPKFKVPEFEKYDGSSCPKNHLIMYCRKMAAYVQNDKLLIHCFQDSL 109

Query: 609 IGPASRWYMQLDSTHICSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKSTESFKEYAQR 668
            GPASRWYMQLDS+++ SWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKSTESFKEYAQR
Sbjct: 110 SGPASRWYMQLDSSNVGSWKNLADSFLKQYKHNIDMAPDRLDLQRMEKKSTESFKEYAQR 169

Query: 669 WRDTAAQVQPPLADKELSTMFINTLKSPFYDKMIGSASTNFSDIMTIGERI 720
           WRDTAAQVQPPL DKELS MFINTLK PFYD+MIG+ASTNFSDIMTIGERI
Sbjct: 170 WRDTAAQVQPPLTDKELSAMFINTLKHPFYDRMIGNASTNFSDIMTIGERI 220

The following BLAST results are available for this feature:

BLAST of Lag0001247 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0036933.1	1.4e-114	33.60	uncharacterized protein E6C27_scaffold86G00060 [Cucumis melo var. makuwa]	[more]
KAA0033221.1	6.9e-101	32.42	uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa]	[more]
XP_022157796.1	3.0e-88	61.00	LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia]	[more]
XP_031738551.1	1.5e-87	39.46	LOW QUALITY PROTEIN: uncharacterized protein LOC101203611 [Cucumis sativus]	[more]
XP_022147189.1	2.4e-85	67.32	LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia]	[more]

BLAST of Lag0001247 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0001247 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T1W2	7.0e-115	33.60	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7SUT0	3.4e-101	32.42	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84...	[more]
A0A6J1DZ90	1.5e-88	61.00	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111024415 PE=4 SV=1	[more]
A0A6J1D099	1.2e-85	67.32	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111016200 PE=4 SV=1	[more]
A0A6J1E2J7	3.4e-85	89.47	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111025431 PE=4 SV=1	[more]

BLAST of Lag0001247 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 288..339
None	No IPR available	PANTHER	PTHR34491	A-TYPE INCLUSION PROTEIN, PUTATIVE-RELATED	coord: 552..717
None	No IPR available	PANTHER	PTHR34491:SF19	GAG-PRO-LIKE PROTEIN	coord: 552..717
None	No IPR available	SUPERFAMILY	57997	Tropomyosin	coord: 290..461
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 607..694 e-value: 6.1E-11 score: 42.5

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0001247.1	Lag0001247.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071897	DNA biosynthetic process
biological_process	GO:0015074	DNA integration
biological_process	GO:0006310	DNA recombination
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
cellular_component	GO:0030430	host cell cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003887	DNA-directed DNA polymerase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity