Lag0001154 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0001154
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Plant protein of unknown function (DUF639)
Location	chr4: 25668212 .. 25671409 (-)
RNA-Seq Expression	Lag0001154
Synteny	Lag0001154

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCTATCTAGCCGTGAACCGCCTTGAAAAAGCCTCGAACCAGGTCTAAAACGCACGAACTGGCCCAAAACAACTGAAAACGGTAAAGATCCACTCGAACCGGTCAAAAACAGTCAAAACTCGTTAAGCCGGTCTGAACCAAGCCACAAACTGAAGAACCGCGGAAACAAAAAATAAATTCGCTCAAACTGCACCAGTCAAGGCTCGAACCCCTGCCCTCATCTCACGCGCACACTACTACAAAAACAACCTTTAATGACGGACACAAAAAAGGGGCGGGGCCTTTGATGACGGACGGAAAACGCGTGCCATTTTTAATGTCGGAAGTGCGGTTTTCCGAAAAAAGCAGAGTTTTAATGACGGGCATTGCCCGTCATTAAAAATCACCTTTAATGGCGGCCATAGCCCGCCATTAAAAGCCCATTTTTATTTATTATTTTTTTTAATTTTTGAAAACGATAAAAAGACAAAATATCTTTTCTCTCTCCCCGAAAACCCTACTTTCTTCAACCTTCAGTCGCTCGTTCCTCCCTTCTTCAACCTTCGGCCGCCACAGCTATCGTTCATCTCTTCTTCAACCTTCAGCCACCGTATGTAACTTTACCTTTTATTAATTTTTCAGCTCCTAATCCCTTCGTTCTCTCTCGTCGAGTCTCTTATCGTTCGCTCTCTGGTATCTCGCTCGCTCGCGTCTCCCTCCTTCACTGACAATGTTGTCTGTGTGCAAGCGATTTCTTCACCGCCGTCGCACCATATCATTCTAACTCTAACTCCATTTCTTCACCACCATTGAACCACTCATGTTTGGAAGCCTCACACCTCCGATCCACTGAAATCTGCTCACTTGGCCTTAAGTTCCACCTGCGGATTCCCCTACTCTTCCCTCTTTTGCTTCTGCTCCCAAGTCTCATTAGGTACTTTATAGATTTATATCTTTTCCTTTTTCTTCTTCTATTTTTCTTTTTCGGCTTATTCTGCTTGTTTTTCTTTCTTTGTAGCCCTCCGATGGGATCAATAAGGTCGTCTTTGGAAGCCAGGTCGAGAGCTTGAACAAAAGGTGAGATCTATGTCTGTTTCTGTTTGTTTCGAATCTTGACTATTGGATTCTTGTTCTTCTCAACAATTTGTGTTTCGATTTGTTAGCTGGTACCTGTTTGTGAATTGTGAGTTGTGAATTATATTGGACTCAAAAGCTACTTTTTGCGATAGTCTTTCCCTTTTGACATTGAGAATACTATTTTGTTTTCTCTCTTTCTCTCTCTCACTCACTTCAATTTATCGTTCTTTATGAGTTTTGTAGCGGTTGTTGACTCTGTATGATTTTTCTCCTCTTCAAGCTTTGTTTTATATTTAATTTTATGCCACCGATCTGCTTGTTTAGTTTGTAAATTGGCCAAACATTTCAAATTTCATACCTCGCTCTCTAACTTCTTCCTCTGTTGCTCTTTTCGCTCAAGTGGTTATTAGGGAAGCAAAGCTTTTTTTATGAAAAACTTGAAGAAATTGAAGGTCTTTCTTCTTAGAGGAATTGTATAAGTTTTTCATAGTATGTTCTGTTCTCCCAGTAGTCCTTGGTTGTTTTCAGTAAAAAGTTAGATGTTCTTTTATTCCTTTTTTGCTGTATGGTTAGTGGTTATTGATGTTTCTTTACAACTGTTACTTAGATGTCATTTATATTAGGCTAGTAAATTAGTGTTCAAGTATTTAAGGGCCCGTTTGACAACGTTCTCGGTTCTTGTTTTTTGTTTCTAATTTGTCCTTGTTTTCGTTCTGTTTTTGTTTAATAACTATGTATGTTTCTTGTTTCTCATTTTTTAGAAACACTCCCAAAATTTATATAGAACTTTTGGGAACAACTAAAACTAGTTTCTCCTTTTTTGTTCTTGTTTCCAATTTTTTCCAAACATAAATAAGAATATAGGTTTATTATTATTGAATGTATAGGGGTTAGGATCATGGAATTCTATTTTTCTTTATTAAGAATGAAGAAACGGAAACAAGAAACGAGAACGTTACCGAACGGTAAATGAATTGATATTCAATCCATTACAATGTCAAATTTGCAGAATCCTTGGTGTTTCTGCTAGCGAACTTCAAGAAAGTTTTAATGTGGAGGCAATTGATACAAAAAAAGGTTCCCTCAAATAATGCCAGAAACTTTCTGGAGTATTGCAGTTTCAGGGCACTTGCTCTATCTACGCAAAATACAGTATTTGACATGTTGATAGCTTGGGAAGCCCCAGCAAGTTCTAGCCAGCCTATACTTAATGTAAGTTTTTTGTTTTATGGGGTTTTCATGTCTGGACTCTAGATTTTTCAAATATAGATAGTTGAAATTGGAAAATCAATATAACTAGATCATTAAGATGCTTCTTTTGTAGTAATTCACTAGGATTTTTTCAGACCTACAAAATTATAAATTGCCTGTGTGTTTTTTGCAAATTATCAAGTGCTAAAATCAATGGCCTCAAACCTCTCAAAGGTTTAACTCTGCTTCCAATGACTTCCCTTTTATTTGAGATGACCCATCAGCATGCAGGTTACTCTACCATGCTACTTCATATTTGTTGCAGATTCTTGTTGAATCACTTGGAGTATATGGTGCTCCAATTGGTTAATTTCTTTAACAGAGATATGAGATATGCACGTTGTCTCATTTCTAATTTTTTATTTGATTTACCACAACGTACTAATTTCACTCCCCTAGTAAAAATGGTTTCAGTTGGTGTATATGAAGACTCCATGTCCTTGTTGTTTTGAAATTATAAATATTAATGTTTTCAATATTCATCTATAGCTAACCTTTATTACAGATTGCTGAGGATGCATCAGTTGGGATGGAGGCTTTTTCTCGAATTGCTCTAGCAATTCCCATAATTTCAAATGTGATCATTAGTGAAAATCTTTTTGAGGTGCTTACTTCATCGACTGGTGCTAGCTTCAGTTTTCTGTCTATGACAAGTATCTGAGCGCACTAGAAAAGTAGGCACCTTTCACCAGATAATCTTTTGTAGATCTTACTACTAAATTTCTATTTTCACCTCTTTATTTTCTCATGTGTGCAGGTAGGTTGGTTCTGACAGAACATGCACTTTACTTTGAAGCTGCTAGCATGAAGGGGATCAAGATGTATGGCTTCTGGAATTGGGCAGAAGTTGCTAGCATGTGGAGGCGAAGAGTAAAGAACAATGTGTAG

mRNA sequence

ATGTCCTATCTAGCCGTGAACCGCCTTGAAAAAGCCTCGAACCAGCTCCTAATCCCTTCGTTCTCTCTCGTCGAGTCTCTTATCGTTCGCTCTCTGCCCTCCGATGGGATCAATAAGGTCGTCTTTGGAAGCCAGGTCGAGAGCTTGAACAAAAGTTTCAGGGCACTTGCTCTATCTACGCAAAATACAGTATTTGACATGTTGATAGCTTGGGAAGCCCCAGCAAGTTCTAGCCAGCCTATACTTAATATTGCTGAGGATGCATCAGTTGGGATGGAGGCTTTTTCTCGAATTGCTCTAGCAATTCCCATAATTTCAAATGTGATCATTAGTGAAAATCTTTTTGAGGTGCTTACTTCATCGACTGGTGCTAGCTTCAGTTTTCTGTCTATGACAAGTAGGTTGGTTCTGACAGAACATGCACTTTACTTTGAAGCTGCTAGCATGAAGGGGATCAAGATGTATGGCTTCTGGAATTGGGCAGAAGTTGCTAGCATGTGGAGGCGAAGAGTAAAGAACAATGTGTAG

Coding sequence (CDS)

ATGTCCTATCTAGCCGTGAACCGCCTTGAAAAAGCCTCGAACCAGCTCCTAATCCCTTCGTTCTCTCTCGTCGAGTCTCTTATCGTTCGCTCTCTGCCCTCCGATGGGATCAATAAGGTCGTCTTTGGAAGCCAGGTCGAGAGCTTGAACAAAAGTTTCAGGGCACTTGCTCTATCTACGCAAAATACAGTATTTGACATGTTGATAGCTTGGGAAGCCCCAGCAAGTTCTAGCCAGCCTATACTTAATATTGCTGAGGATGCATCAGTTGGGATGGAGGCTTTTTCTCGAATTGCTCTAGCAATTCCCATAATTTCAAATGTGATCATTAGTGAAAATCTTTTTGAGGTGCTTACTTCATCGACTGGTGCTAGCTTCAGTTTTCTGTCTATGACAAGTAGGTTGGTTCTGACAGAACATGCACTTTACTTTGAAGCTGCTAGCATGAAGGGGATCAAGATGTATGGCTTCTGGAATTGGGCAGAAGTTGCTAGCATGTGGAGGCGAAGAGTAAAGAACAATGTGTAG

Protein sequence

MSYLAVNRLEKASNQLLIPSFSLVESLIVRSLPSDGINKVVFGSQVESLNKSFRALALSTQNTVFDMLIAWEAPASSSQPILNIAEDASVGMEAFSRIALAIPIISNVIISENLFEVLTSSTGASFSFLSMTSRLVLTEHALYFEAASMKGIKMYGFWNWAEVASMWRRRVKNNV

Homology

[Close]

BLAST of Lag0001154 vs. NCBI nr
Match: XP_022134973.1 (uncharacterized protein LOC111007092 [Momordica charantia])

HSP 1 Score: 113.2 bits (282), Expect = 2.2e-21
Identity = 64/87 (73.56%), Postives = 70/87 (80.46%), Query Frame = 0


Query: 53  FRALALSTQNT-----------VFDMLIAWEAPASSSQPILNIAEDASVGMEAFSRIALA 112
           FRALALSTQNT            FDM+IAWEAPASSSQP++NI E+ASVG+EAFSRIA A
Sbjct: 101 FRALALSTQNTGYLADKKFRRLTFDMMIAWEAPASSSQPLVNIDEEASVGVEAFSRIASA 160

Query: 113 IPIISNVIISENLFEVLTSSTGASFSF 129
           +PIISNVIISENLFEVLTSSTGA   F
Sbjct: 161 VPIISNVIISENLFEVLTSSTGARLQF 187

[Close]

BLAST of Lag0001154 vs. NCBI nr
Match: XP_021909476.1 (uncharacterized protein LOC110823411 [Carica papaya])

HSP 1 Score: 110.9 bits (276), Expect = 1.1e-20
Identity = 68/120 (56.67%), Postives = 82/120 (68.33%), Query Frame = 0


Query: 53  FRALALSTQ-----------NTVFDMLIAWEAPASSSQPILNIAEDASVGMEAFSRIALA 112
           FR LALSTQ              +DM++AWEAPA+SSQP+LNI  DASVG+EAFSRIA A
Sbjct: 101 FRTLALSTQVVGHLADKKFRRLTYDMMVAWEAPAASSQPLLNIDGDASVGVEAFSRIAPA 160

Query: 113 IPIISNVIISENLFEVLTSSTGA---------------SFSFLSMTS-RLVLTEHALYFE 146
           +PII+NVIISENLFEVLTSSTG                S S+  +++ RL+LT+HALYFE
Sbjct: 161 VPIIANVIISENLFEVLTSSTGGRLQFSVYDKYLTALDSLSYFDISAGRLILTDHALYFE 220

[Close]

BLAST of Lag0001154 vs. NCBI nr
Match: KAG6587653.1 (hypothetical protein SDJN03_16218, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 110.5 bits (275), Expect = 1.4e-20
Identity = 63/88 (71.59%), Postives = 69/88 (78.41%), Query Frame = 0


Query: 52  SFRALALSTQNT-----------VFDMLIAWEAPASSSQPILNIAEDASVGMEAFSRIAL 111
           SFRALA+ST NT            FDM+IAWEAPASSSQP LNIAEDASVG+EAFSRIA 
Sbjct: 165 SFRALAVSTHNTGYLADKKFRRLTFDMMIAWEAPASSSQPELNIAEDASVGVEAFSRIAP 224

Query: 112 AIPIISNVIISENLFEVLTSSTGASFSF 129
           A+PIISNVIISEN+FEVLT+S GA   F
Sbjct: 225 AVPIISNVIISENIFEVLTTSAGARLQF 252

[Close]

BLAST of Lag0001154 vs. NCBI nr
Match: KAG7021615.1 (hypothetical protein SDJN02_15341, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 110.5 bits (275), Expect = 1.4e-20
Identity = 63/88 (71.59%), Postives = 69/88 (78.41%), Query Frame = 0


Query: 52  SFRALALSTQNT-----------VFDMLIAWEAPASSSQPILNIAEDASVGMEAFSRIAL 111
           SFRALA+ST NT            FDM+IAWEAPASSSQP LNIAEDASVG+EAFSRIA 
Sbjct: 166 SFRALAVSTHNTGYLADKKFRRLTFDMMIAWEAPASSSQPELNIAEDASVGVEAFSRIAP 225

Query: 112 AIPIISNVIISENLFEVLTSSTGASFSF 129
           A+PIISNVIISEN+FEVLT+S GA   F
Sbjct: 226 AVPIISNVIISENIFEVLTTSAGARLQF 253

[Close]

BLAST of Lag0001154 vs. NCBI nr
Match: XP_023007131.1 (uncharacterized protein LOC111499719 [Cucurbita maxima])

HSP 1 Score: 110.5 bits (275), Expect = 1.4e-20
Identity = 63/88 (71.59%), Postives = 69/88 (78.41%), Query Frame = 0


Query: 52  SFRALALSTQNT-----------VFDMLIAWEAPASSSQPILNIAEDASVGMEAFSRIAL 111
           SFRALA+ST NT            FDM+IAWEAPASSSQP LNIAEDASVG+EAFSRIA 
Sbjct: 100 SFRALAVSTHNTGYLADKRFRRLTFDMMIAWEAPASSSQPELNIAEDASVGVEAFSRIAP 159

Query: 112 AIPIISNVIISENLFEVLTSSTGASFSF 129
           A+PIISNVIISEN+FEVLT+S GA   F
Sbjct: 160 AVPIISNVIISENIFEVLTTSAGARLEF 187

The following BLAST results are available for this feature:

BLAST of Lag0001154 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134973.1	2.2e-21	73.56	uncharacterized protein LOC111007092 [Momordica charantia]	[more]
XP_021909476.1	1.1e-20	56.67	uncharacterized protein LOC110823411 [Carica papaya]	[more]
KAG6587653.1	1.4e-20	71.59	hypothetical protein SDJN03_16218, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7021615.1	1.4e-20	71.59	hypothetical protein SDJN02_15341, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023007131.1	1.4e-20	71.59	uncharacterized protein LOC111499719 [Cucurbita maxima]	[more]

BLAST of Lag0001154 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31860:SF6	HEAT-INDUCIBLE TRANSCRIPTION REPRESSOR (DUF639)	coord: 63..128
None	No IPR available	PANTHER	PTHR31860	HEAT-INDUCIBLE TRANSCRIPTION REPRESSOR (DUF639)-RELATED	coord: 63..128

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0001154.1	Lag0001154.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane