Lag0001100 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0001100
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRetrotransposon gag protein
Locationchr4: 24475158 .. 24478642 (+)
RNA-Seq ExpressionLag0001100
SyntenyLag0001100
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAAACTTGGAGTTGAAACTTTTCGATGAAGTAAACAGTGACGAGAAGCTTCATAGTATCATCCCGTCACGTATGAAGAGGAAGTTTTCTGTTCTCATAAATACGGAAGGTTCCTTGAAGGTGAAGCCAAATCTCATTATCTTGACCAATCCTGCAAATGAAGGATCTGATCAAGACCATGACAAAGATAAGAGCTTTTAAATGTAAAAGCTCCTTATCGCAAGAGCCTAAACTGCATGATGCTCCTAGCCCACACGAGCTTAAAAGGTGAGTGCAAAAAAAATCTTGAACTACGTTATGACTTGATCCCTATTCCATAAGGGTACGTAGGCAGCTTAAAGAAAACTTTAAGTTCAGTTTCTATAAACAAAAAAAAAAAAGTTCTTCGCTGCAGTTCCTTCTCTCCAAGTTCGAGGGTCCTTACACTGTACGCTATTGCGTTGTTCCTTCTCCAAGTTCGAAGGTTCTTCGTTGTATCCTGCTGCGTTGTTCCTTCTCCAAGTTCGAGGGTTCTCAGTTGTACGACTGCTACGTTGTTCCTCCTCCAAGTGCGAAGGATCTTATGTGGTGCGTTGTTGCATTGTTCCCTCTTCTCTCAAGTTCGAGGGTTCTCACGCAGCTTTGCTGGAGTTTCTTCTCCCCAAGTTCGAAGGTTCTCACGCGCTCCGTTGCAGTTCCTTCTTTCCAAGGTCGAAGGTTCTCACTCGCTGCGTTGTAGTTCTTTCTCCCCAAGTTCGAAGGTTCACGCACTTCGCTGCAGTTCCTTCTCCCAAATTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTTCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTCGTGCAGTTCCTTCCTCAAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTTAAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCCTCACAATTCGAAGGTTCTCACGTGCTTCGGTGAAGTTCCTTCCTCCAAGTCTGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTTGCTGCAGTTCCTTCCTCACAGTTCGAAGGTTCTCACGCGCCTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGATTCTCACGTCGCTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACATCGCTTCGCTTCGCGCTGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACACGCTTCGCTACAGTTTCTTCTCCCTAACTTCGAAGGTTCTCACGCGCTTCGCTGCAATTCCTTCCTCCCTAAGTTTGAAGTTTCTCACGCATGAAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGGTCTAGCAGGAGTGCATGAAGGCGAATCTGGTGACTATCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGTGCATCACTGAAGGCGAGTCTGATGATTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGGTCTAGCAGGAGTGCATCGCTATAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATGAAATAGGGGACTGGTCTAGCAGGAGTGAGATCACTGCAAGTGAAGCTGGTGACGACCGTTGCACGAAGCTTACACATTCAAGCAAGAAAGAAACAAATTGCAATAATATATGTGCAAAGAAAGAAATGGAAGCCAAAAGCTCTATAGTACAATCAAAGTAATTCATATGAGCGAAATCCAATAAGGACATACATGGAATATATATGCAGATAAAAAAAAAAAAAAACGAAAAGTAAAAAAAAAATAAATAAAAACGAAAAAAAAAAGAGAAGAAAGTTTCCTACCTGGATCCCTTCTTGGATGCTCTCTGCAATTGATGTGTGCTCTCCCTTACTGAGGTTCAGTCTTATTTATAGGGGGAGTTTTAAGTTCAAATCAAAGGTTTAGATAAAGATCTGACTCAAATGAAATCCTATCTCCGGTTCAAAATTTTATGAGATAATCTTTATCTTTATCTGAACCAACTTAATTAAATTAAAATTCCTAAAAGATTATTTCAATTCAAATCAATTTAGGAATTCAAATTTTATCTAAATAATTTTATTTGGGCATACTCCAAATTTTTCTTCCAAATCAAAATTTGAGATTCAAACATCAAATTCTATGCCAAATGCAAGTTTGAATTTGGTAAAATTTTACCTCAAATAATATTTTGGGCACAATCCAAATTTTATCCCAAATGGACCAAAGTCCAAACCTCAAGTTATGTTCCATATTTTGATTAAATTGGCGCACCAAATGGAGTCAAAGTCAAGAACAAATACCTTGCATTTTAATTCCAAAATATATTTTTCGAGATTCACTCACACATAATTTGTGCCTAAATCTCGAAAAGGGGGCATTTGTTGATGGAGAAATTTTGACCAATCACGAATTGCCACGTCATTACATAAAATTAATGACGAAATTAAAGTTAATTAAATTTGGGACCAATTATAAATTGACATGTGTCCCAAAATTTAATTTGAAAACAAAGTTGGCCAATTATAAATTTATAGAGCCAAATTTCTATTTGATCAATTAATTAAAATTAAATTATTTCAATCAAATTAATTAATTTGACCAATTAATTAAAAATAATAATTATTTGGATCAAATTTGGGTCTTTTAAATGTCTGGGTCATATGGTTTTGGGTCAAATATAAACCAAACCCAAGACTAAATGGTTCAGTCCAAGACCAATAAAACCCAAGCCCAAGTTGTTAGGCCCAAAAGTTAGCAGGGCCCATCCTGCGAGAACTCTATAAATAGGGGGATTCAGCCAGAGGCAGAGGGGGCAGAGTCCAGAGCATTCTCCCAAGATCCATAGTCGTCAGAATCCAAAGAGTCCAGAGAATTCAGAGATCCGAGATTCAAAACTCAAAGGATTCAAGCTCAGAAGATTGGGAGACTAGAAGACTCTAAAAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAACAGCCCGATCATCCAAGAGAATCAACAAGCTAACAAGCCGATTCGACAGATCATCAAGCCAATCGACTGATCAGGAAGATCAATAAGTCAGCAGACCGATCATCCAAGAAGATCAACAAGCCAACAGGCCGATCATCCAAGAAGATCAACAAATCAGCAGACCGATCATCAAACCGATCATCCGAGAAGATCAATAAGTCAGTAGACCGATCATCCAAGAAGATCAACAAGCCAACAGGCCGATCATCCAAGAAGATAAACAAGTTAGCAGATCGATCATCAAACCGATCATCCGAGAAGATCAACAAGTCAGCAGACCGATCATCCAAGAAGATCAACAAGGCAACAGGCCGATCATCCAAGAAGATCAACAAGTCACAACAGGCTGATCCAAGAGATCATTAA

mRNA sequence

ATGAAAAACTTGGAGTTGAAACTTTTCGATGAAGTAAACAGTGACGAGAAGCTTCATAGTATCATCCCGTCACGTATGAAGAGGAAGTTTTCTGTTCTCATAAATACGGAAGGTTCCTTGAAGTTCGAAGGTTCTTCGTTGTATCCTGCTGCGTTGTTCCTTCTCCAAGTTCGAGGGTTCTCAGTTGTACGACTGCTACGTTGTTCCTCCTCCAAGTGCGAAGGATCTTATGTGGTGCGTTGTTGCATTGTTCCCTCTTCTCTCAAGTTCGAGGGTTCTCACGCAGCTTTGCTGGAGTTTCTTCTCCCCAAGTTCGAAGGTTCTCACGCGCTCCGTTGCAGTTCCTTCTTTCCAAGGTCGAAGGTTCTCACTCGCTGCGTTGTAGTTCTTTCTCCCCAAGTTCGAAGGTTCACGCACTTCGCTGCAGTTCCTTCTCCCAAATTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTTCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTCGTGCAGTTCCTTCCTCAAAATTCGAAGTTCCTTCCTCCAAGTCTGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTTGCTGCAGTTCCTTCCTCACAGTTCGAAGGTTCTCACGCGCCTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGATTCTCACGTCGCTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACATCGCTTCGCTTCGCGCTGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACACGCTTCGCTACAGTTTCTTCTCCCTAACTTCGAAGGTTCTCACGCGCTTCGCTGCAATTCCTTCCTCCCTAAGTTTGAAGTTTCTCACGCATGAAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATGAAATAGGGGACTGGTCTAGCAGGAGTGAGATCACTGCAAGTGAAGCTGGTGACGACCGTTGCACGAAGCTTACACATTCAAGCAAGAAAGAAACAAATTGCAATAATATATGTGCAAAGAAAGAAATGGAAGCCAAAAGCTCTATAGTACAATCAAAGAAGATCAATAAGTCAGCAGACCGATCATCCAAGAAGATCAACAAGCCAACAGGCCGATCATCCAAGAAGATCAACAAATCAGCAGACCGATCATCAAACCGATCATCCGAGAAGATCAATAAGTCAGTAGACCGATCATCCAAGAAGATCAACAAGCCAACAGGCCGATCATCCAAGAAGATAAACAAGTTAGCAGATCGATCATCAAACCGATCATCCGAGAAGATCAACAAGTCAGCAGACCGATCATCCAAGAAGATCAACAAGGCAACAGGCCGATCATCCAAGAAGATCAACAAGTCACAACAGGCTGATCCAAGAGATCATTAA

Coding sequence (CDS)

ATGAAAAACTTGGAGTTGAAACTTTTCGATGAAGTAAACAGTGACGAGAAGCTTCATAGTATCATCCCGTCACGTATGAAGAGGAAGTTTTCTGTTCTCATAAATACGGAAGGTTCCTTGAAGTTCGAAGGTTCTTCGTTGTATCCTGCTGCGTTGTTCCTTCTCCAAGTTCGAGGGTTCTCAGTTGTACGACTGCTACGTTGTTCCTCCTCCAAGTGCGAAGGATCTTATGTGGTGCGTTGTTGCATTGTTCCCTCTTCTCTCAAGTTCGAGGGTTCTCACGCAGCTTTGCTGGAGTTTCTTCTCCCCAAGTTCGAAGGTTCTCACGCGCTCCGTTGCAGTTCCTTCTTTCCAAGGTCGAAGGTTCTCACTCGCTGCGTTGTAGTTCTTTCTCCCCAAGTTCGAAGGTTCACGCACTTCGCTGCAGTTCCTTCTCCCAAATTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTTCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTCGTGCAGTTCCTTCCTCAAAATTCGAAGTTCCTTCCTCCAAGTCTGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTTGCTGCAGTTCCTTCCTCACAGTTCGAAGGTTCTCACGCGCCTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGATTCTCACGTCGCTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACATCGCTTCGCTTCGCGCTGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACACGCTTCGCTACAGTTTCTTCTCCCTAACTTCGAAGGTTCTCACGCGCTTCGCTGCAATTCCTTCCTCCCTAAGTTTGAAGTTTCTCACGCATGAAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATGAAATAGGGGACTGGTCTAGCAGGAGTGAGATCACTGCAAGTGAAGCTGGTGACGACCGTTGCACGAAGCTTACACATTCAAGCAAGAAAGAAACAAATTGCAATAATATATGTGCAAAGAAAGAAATGGAAGCCAAAAGCTCTATAGTACAATCAAAGAAGATCAATAAGTCAGCAGACCGATCATCCAAGAAGATCAACAAGCCAACAGGCCGATCATCCAAGAAGATCAACAAATCAGCAGACCGATCATCAAACCGATCATCCGAGAAGATCAATAAGTCAGTAGACCGATCATCCAAGAAGATCAACAAGCCAACAGGCCGATCATCCAAGAAGATAAACAAGTTAGCAGATCGATCATCAAACCGATCATCCGAGAAGATCAACAAGTCAGCAGACCGATCATCCAAGAAGATCAACAAGGCAACAGGCCGATCATCCAAGAAGATCAACAAGTCACAACAGGCTGATCCAAGAGATCATTAA

Protein sequence

MKNLELKLFDEVNSDEKLHSIIPSRMKRKFSVLINTEGSLKFEGSSLYPAALFLLQVRGFSVVRLLRCSSSKCEGSYVVRCCIVPSSLKFEGSHAALLEFLLPKFEGSHALRCSSFFPRSKVLTRCVVVLSPQVRRFTHFAAVPSPKFEGSHALRSAISSPKFEGSHALRAVPSSKFEVPSSKSEGSHALRCSSFPQVRRFSRALLQFLPHSSKVLTRLAAVPSPKFEDSHVASLQFLPPSLKVLTSLRFALRFVAVPSSKFEGSHTLRYSFFSLTSKVLTRFAAIPSSLSLKFLTHEGESGDYPCRLLRSPNEIGDWSSRSEITASEAGDDRCTKLTHSSKKETNCNNICAKKEMEAKSSIVQSKKINKSADRSSKKINKPTGRSSKKINKSADRSSNRSSEKINKSVDRSSKKINKPTGRSSKKINKLADRSSNRSSEKINKSADRSSKKINKATGRSSKKINKSQQADPRDH
Homology
[Close]
BLAST of Lag0001100 vs. NCBI nr
Match: KAA0041559.1 (hypothetical protein E6C27_scaffold93G00150 [Cucumis melo var. makuwa])

HSP 1 Score: 58.9 bits (141), Expect = 1.4e-04
Identity = 37/98 (37.76%), Postives = 49/98 (50.00%), Query Frame = 0 

Query: 1   MKNLELKLFDEVNSDEKLHSIIPSRMKRKFSVLINTEGSLKFEGSSLYPAALFLLQVRGF 60
           MK+L+ K F E N D+K+HS +PSRMKRK SV INTEG+      ++    L L   RG 
Sbjct: 146 MKSLKAKPFREENDDDKIHSCVPSRMKRKLSVDINTEGTASPPFQNVNQQTLLLYDWRGP 205

Query: 61  SVVRLLRCSSSKCEGSYVVRCCIVPSSLKFEGSHAALL 99
           S      C S +    +++ C        F  SH   L
Sbjct: 206 SSSPFHMCCSREDHHLHLLTCVAAERITIFTFSHVLQL 243

[Close]
BLAST of Lag0001100 vs. NCBI nr
Match: PAA71337.1 (hypothetical protein BOX15_Mlig005876g1 [Macrostomum lignano])

HSP 1 Score: 58.2 bits (139), Expect = 2.3e-04
Identity = 46/158 (29.11%), Postives = 86/158 (54.43%), Query Frame = 0 

Query: 321  RSEITASEAGDDRCTKLTHSSKKETNCNNICAKKEMEAKSSIVQSKKINKSADRSSKKIN 380
            RS  ++ +    +  K+     +++   N    ++   K    +S+K+N+   R S+K+N
Sbjct: 1239 RSRKSSGKKRSRKSRKVNRKRGRKSRKVNRKRSRKSSGKKRSRKSRKVNRKRGRKSRKVN 1298

Query: 381  KPTGRSSKKIN-----KSADRSSNRSSEKINKSVDRSSKKINKPTGRSSKKINKLADRSS 440
            +   R S+K+N     KS+ +  +R S K+N+   R S+K+N+  GR S+K+N+   R S
Sbjct: 1299 RKRSRKSRKVNRKRSRKSSGKKRSRKSRKVNRKRSRKSRKVNRKRGRKSRKVNRKRSRKS 1358

Query: 441  -----NRSSEKINKSADRSSKKINKATGRSSKKINKSQ 469
                 +R S K+N+   R S+K+N+  GR S+K+N+ +
Sbjct: 1359 SGKKRSRKSRKVNRKRSRKSRKVNRKRGRKSRKVNRKR 1396

[Close]
BLAST of Lag0001100 vs. NCBI nr
Match: PAA71360.1 (hypothetical protein BOX15_Mlig020368g1 [Macrostomum lignano])

HSP 1 Score: 56.6 bits (135), Expect = 6.7e-04
Identity = 45/134 (33.58%), Postives = 75/134 (55.97%), Query Frame = 0 

Query: 354  KEMEAKSSIVQSKKINKSADRSSKKINKPTGRSSKKIN-----KSADRSSNRSSEKINKS 413
            ++   K    +S+K+N+   R S+K+N+  GR S+K+N     KSA +  +R S K+N+ 
Sbjct: 1457 RKSSGKKRSRKSRKVNRKRGRKSRKVNRKRGRKSRKVNRKRGRKSAGKKRSRKSRKVNRK 1516

Query: 414  VDRSSKKINKPTGRSSKKINKLADRSS-----NRSSEKIN---------KSADRSSKKIN 469
              R S+K+N+  GR S+K+N+   R S     +R S K+N         K   R S+K+N
Sbjct: 1517 RGRKSRKVNRKRGRKSRKVNRKRSRKSSGKKRSRKSRKVNRKRSRKSSGKKRSRKSRKVN 1576

[Close]
BLAST of Lag0001100 vs. NCBI nr
Match: QAX24809.1 (adhesion protein 1 [Macrostomum lignano])

HSP 1 Score: 56.6 bits (135), Expect = 6.7e-04
Identity = 45/134 (33.58%), Postives = 75/134 (55.97%), Query Frame = 0 

Query: 354  KEMEAKSSIVQSKKINKSADRSSKKINKPTGRSSKKIN-----KSADRSSNRSSEKINKS 413
            ++   K    +S+K+N+   R S+K+N+  GR S+K+N     KSA +  +R S K+N+ 
Sbjct: 1456 RKSSGKKRSRKSRKVNRKRGRKSRKVNRKRGRKSRKVNRKRGRKSAGKKRSRKSRKVNRK 1515

Query: 414  VDRSSKKINKPTGRSSKKINKLADRSS-----NRSSEKIN---------KSADRSSKKIN 469
              R S+K+N+  GR S+K+N+   R S     +R S K+N         K   R S+K+N
Sbjct: 1516 RGRKSRKVNRKRGRKSRKVNRKRSRKSSGKKRSRKSRKVNRKRSRKSSGKKRSRKSRKVN 1575

[Close]
BLAST of Lag0001100 vs. NCBI nr
Match: KAA0040811.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 56.2 bits (134), Expect = 8.8e-04
Identity = 27/40 (67.50%), Postives = 33/40 (82.50%), Query Frame = 0 

Query: 1   MKNLELKLFDEVNSDEKLHSIIPSRMKRKFSVLINTEGSL 41
           MK+L++K F E N D+K+HS +PSRMKRK SV INTEGSL
Sbjct: 548 MKSLKVKPFHEENDDDKIHSRVPSRMKRKLSVDINTEGSL 587

[Close]
BLAST of Lag0001100 vs. ExPASy TrEMBL
Match: A0A5A7TJM9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold93G00150 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 6.5e-05
Identity = 37/98 (37.76%), Postives = 49/98 (50.00%), Query Frame = 0 

Query: 1   MKNLELKLFDEVNSDEKLHSIIPSRMKRKFSVLINTEGSLKFEGSSLYPAALFLLQVRGF 60
           MK+L+ K F E N D+K+HS +PSRMKRK SV INTEG+      ++    L L   RG 
Sbjct: 146 MKSLKAKPFREENDDDKIHSCVPSRMKRKLSVDINTEGTASPPFQNVNQQTLLLYDWRGP 205

Query: 61  SVVRLLRCSSSKCEGSYVVRCCIVPSSLKFEGSHAALL 99
           S      C S +    +++ C        F  SH   L
Sbjct: 206 SSSPFHMCCSREDHHLHLLTCVAAERITIFTFSHVLQL 243

[Close]
BLAST of Lag0001100 vs. ExPASy TrEMBL
Match: A0A267FDU5 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig005876g1 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.1e-04
Identity = 46/158 (29.11%), Postives = 86/158 (54.43%), Query Frame = 0 

Query: 321  RSEITASEAGDDRCTKLTHSSKKETNCNNICAKKEMEAKSSIVQSKKINKSADRSSKKIN 380
            RS  ++ +    +  K+     +++   N    ++   K    +S+K+N+   R S+K+N
Sbjct: 1239 RSRKSSGKKRSRKSRKVNRKRGRKSRKVNRKRSRKSSGKKRSRKSRKVNRKRGRKSRKVN 1298

Query: 381  KPTGRSSKKIN-----KSADRSSNRSSEKINKSVDRSSKKINKPTGRSSKKINKLADRSS 440
            +   R S+K+N     KS+ +  +R S K+N+   R S+K+N+  GR S+K+N+   R S
Sbjct: 1299 RKRSRKSRKVNRKRSRKSSGKKRSRKSRKVNRKRSRKSRKVNRKRGRKSRKVNRKRSRKS 1358

Query: 441  -----NRSSEKINKSADRSSKKINKATGRSSKKINKSQ 469
                 +R S K+N+   R S+K+N+  GR S+K+N+ +
Sbjct: 1359 SGKKRSRKSRKVNRKRSRKSRKVNRKRGRKSRKVNRKR 1396

[Close]
BLAST of Lag0001100 vs. ExPASy TrEMBL
Match: A0A411ACX2 (Adhesion protein 1 OS=Macrostomum lignano OX=282301 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 3.3e-04
Identity = 45/134 (33.58%), Postives = 75/134 (55.97%), Query Frame = 0 

Query: 354  KEMEAKSSIVQSKKINKSADRSSKKINKPTGRSSKKIN-----KSADRSSNRSSEKINKS 413
            ++   K    +S+K+N+   R S+K+N+  GR S+K+N     KSA +  +R S K+N+ 
Sbjct: 1456 RKSSGKKRSRKSRKVNRKRGRKSRKVNRKRGRKSRKVNRKRGRKSAGKKRSRKSRKVNRK 1515

Query: 414  VDRSSKKINKPTGRSSKKINKLADRSS-----NRSSEKIN---------KSADRSSKKIN 469
              R S+K+N+  GR S+K+N+   R S     +R S K+N         K   R S+K+N
Sbjct: 1516 RGRKSRKVNRKRGRKSRKVNRKRSRKSSGKKRSRKSRKVNRKRSRKSSGKKRSRKSRKVN 1575

[Close]
BLAST of Lag0001100 vs. ExPASy TrEMBL
Match: A0A267FC56 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig020368g1 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 3.3e-04
Identity = 45/134 (33.58%), Postives = 75/134 (55.97%), Query Frame = 0 

Query: 354  KEMEAKSSIVQSKKINKSADRSSKKINKPTGRSSKKIN-----KSADRSSNRSSEKINKS 413
            ++   K    +S+K+N+   R S+K+N+  GR S+K+N     KSA +  +R S K+N+ 
Sbjct: 1457 RKSSGKKRSRKSRKVNRKRGRKSRKVNRKRGRKSRKVNRKRGRKSAGKKRSRKSRKVNRK 1516

Query: 414  VDRSSKKINKPTGRSSKKINKLADRSS-----NRSSEKIN---------KSADRSSKKIN 469
              R S+K+N+  GR S+K+N+   R S     +R S K+N         K   R S+K+N
Sbjct: 1517 RGRKSRKVNRKRGRKSRKVNRKRSRKSSGKKRSRKSRKVNRKRSRKSSGKKRSRKSRKVN 1576

[Close]
BLAST of Lag0001100 vs. ExPASy TrEMBL
Match: A0A5D3CRV2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold663G00230 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 3.3e-04
Identity = 30/58 (51.72%), Postives = 39/58 (67.24%), Query Frame = 0 

Query: 1  MKNLELKLFDEVNSDEKLHSIIPSRMKRKFSVLINTEGSLKFEGSSLYPAALFLLQVR 59
          MK+L+ K F E N D+K+HS +PSRMKRK SV INTE  ++    S + A L  LQ+R
Sbjct: 10 MKSLKAKPFHEENDDDKIHSHVPSRMKRKLSVDINTE-DIRSSSKSNFEALLMFLQIR 66

The following BLAST results are available for this feature:
BLAST of Lag0001100 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0041559.11.4e-0437.76hypothetical protein E6C27_scaffold93G00150 [Cucumis melo var. makuwa][more]
PAA71337.12.3e-0429.11hypothetical protein BOX15_Mlig005876g1 [Macrostomum lignano][more]
PAA71360.16.7e-0433.58hypothetical protein BOX15_Mlig020368g1 [Macrostomum lignano][more]
QAX24809.16.7e-0433.58adhesion protein 1 [Macrostomum lignano][more]
KAA0040811.18.8e-0467.50retrotransposon gag protein [Cucumis melo var. makuwa][more]
BLAST of Lag0001100 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Lag0001100 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TJM96.5e-0537.76Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A267FDU51.1e-0429.11Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig005876g1 P... [more]
A0A411ACX23.3e-0433.58Adhesion protein 1 OS=Macrostomum lignano OX=282301 PE=2 SV=1[more]
A0A267FC563.3e-0433.58Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig020368g1 P... [more]
A0A5D3CRV23.3e-0451.72Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of Lag0001100 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 425..454
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 358..475
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 388..417

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0001100.1Lag0001100.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0008233 peptidase activity