Lag0001091 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0001091
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Flocculation protein FLO11-like
Location	chr4: 24289149 .. 24296220 (+)
RNA-Seq Expression	Lag0001091
Synteny	Lag0001091

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAGGCTTATTGAGTCGGCGAACAGGCCACTCTCACCCGTACAAATCAAAGGACAATCTCTCATGGACAGGAGTCCATAATCCACTCAGGATTAAGGCCAAGTTGCCTAGGTCATCCTAGTGAAATAGAAACCGAGCTAACTAACGGTGTTACAGTTAGTGGTTAACTATTTCGTGGTCCGATCTTTGTGCAAACTCATTGCACAGGATACCTCCACTCGCATGTCAACCACATGAACGCGTTGGATCACTACGTTTGTATCAATATACAAAGCGGGTCGTATCCATAGTGTCACCAGGACAAGGTACCCAGCCTTATCCGTATACTACAGACCCTTTAGGCTAAAACTTGAACATTGATCCCCGTATGTCCCTACGTACTAGTTCAAGCCTCATTCTATTAGCCTTGGATGTTTAGTTTATTGGATTAGGGTTAATAAGACAAGATATAATACAAACATTGAATAATACATCACTTTTATTAATGTTCGGTCAAATGTACATTTACTATCTACGAGTTTTAGGGCATAAAACCCAACAGTGGGGACATACGGGGATTAGTGTCCAAGTAACAACCTAAAAGGTCTATAGTATAGGGATAAGACTAGGTACCTTATCCTGGTGACACTATGTGATATGACCCACCTTGTATTCGATACAGATGCAATGATCCAAAGCATCTATGTAGGAGACATGCGGGTGGGGGTATCCTATGCAATGAGTTTGCATAAGACCGGACCGGGAAATAGTAACCACTAGATGTAACGTCGTTAACTAGTTTAGGTTTCTATTTCAATAGGATGACCTAGGTAACTCAATCTCAATCCTGAGTCTGTTATGAACCCTTTTCAGGAGGGATTGTTCTTCGATTTGTATGGATGAGAGTAGCAAGTTCGCCAACTCAATAATCCTACCATTTCAGGGGCAAGACCGAATGGGGGCTGTGAACACAACAGTACAAGATGAAGTTCACTCCTTCCCCTATTGGGGTAAGTAGATGTGTGTTCCCTTAAGGGCTGATTCTGGGCTTGAACAAAGGCGCGTCGTCCTCTCCTGGCCCGAGAGGAACTCCTGTTTAGTGGTTGGACCCTAAACAACTTGTTCATTAGAGAAATCAGTGGTACTAAAGGAACCAGAGGTAACCCAGGGGTAAAACGGTAATTTGACCCAGCTGGTGTTACGAACACACGTGAAGGATTGACTTACTGCTTGGTCGATATCTGTGGACACATAAATATTCTACAGTGAGAAGAGTGCAGTTGTGGGCCTTTAGTGGAGTGACCCACAGTTGACGAATGTTGACTAACTTGGTTAATGAGTTTGGCCAATTAGTCTCGTATCGTTAGAGCTTCTGATCTGTAGGTCCATTAGGTCCCACTGGTAACTCGTAAAGAGACTTGAGGCAATTAAGTATAAATTATAAATTGAAAGTGTTCAATTTATTTGGGGAATCGTATAATGTATATTGATGCATTATAATATAAAGTTTATGAAACTTTATAATATAATTTTTGAATTAATTTCAAAAATTAATTCTTGAGAGAAAATATTTGAAAGAGTTCAAATAAATTTAATATGAATTGGACTCATAATAATTTTAATAAAATCCCTAAGATTAAATATATGATATTTAATTGGGTAATTAATTAATTATGGAATTAATTATTTATTTATTAAAATTAGAGACCTTTTCCTATTAGGAAAGAAAATATTTGAAAGAGTTCAAATAAATTTAATATGAATTGGATTCATATTAATTTTAATTTTAATAAAATCTCTAAGATTAAATATATGATATTTAATTGGGAAATTAATTAATTATGGAATTAATTATTTATTTATTAAAATTAGAGACATTTTCTATTAGGAAAAGGTCTTCCTTTTCCTATTAGGAAAAAGGTCTTGGCCTTTACTATATATACGACCCCTAGGGTGGGGTGAAAGGCATCTCATTCATTCTCCTACTCTCAGAGAATTCCCCTCAAGGCTTCGTCTAGACTCCCACCAGTCTCCTGTCTCTAGAAGTCTCAGAGTCATACCGGTGTAGCCATAGTGGTGGTGTTCGTAGATTTAAATCTAATATTTTTGTATGTTTAGCCTTAATATATATTTAGAATAGTTCTAATATTATTGTCAATGTATTGGTATTTTAGATTAAACAAAATTAATTACGAATCGGTCCCAATCACGCTACTGCTTTACGGAATTACGAAATTCCAATCGTTCACTAATGGACCTGCAGATCAGAAGCTCCAACGATGTGAGATTAATTGGTCAAACTCATTAACCAAATTAATCAATATTCATTAACTGTGTGTACATTCCACTATAGACTCACAGTTTCACCCTTCTCCCTACAGATATATTTTCTGTGTCTACAGATATTGACCAATAACGACTAGTTAGTCCTTCACGAGTGTCCGTAACTCCAGCTGGGTCAAATTACCGTTTTATCCATGGGTTACTTCTATTTCCTTAAGTACCAGTTCTCCTCTAATGAACAACCTGTTTGTGGTCCAACCATCAAACAGAAAACCCTCTCGTGCCATTGAGAGGGTAGGGCTCTTTGTTCAAGACTCGGAGTCACCACTTAAGGGAACACTCATCTGCTTCCCTAAAGTCGGGAAGGAGTGAATTTCATCTTGTACGATTATGTTTCCAGCTCCCCACTCGGTCTTGTCCCCAAAATGGTAGGCTTATTGAGTCGGTGTATTGGGCTACTCTCACCCATACAAATCAAAGGACAATCCCTCATGAGTAGGAGTCCATAATCAACTCAGGATTAAGACCAAGTTGTCTAAGTCGTCCTAGTGAAATAGAAAATCAACTAGTTAACGGTGTTATAACAAGTGGTTACTATTTCGCGGTTCGGTCTTATGCAAACTCATTGCATAGGATACCCCCACTCGCATGTCTCCTACACGAACACGTTGGATTATAGCGTTTGTATCAAATACAAAGTGGGTCGTATCCATAGTGTCACCAGAATAAGGCACCCAGTCTTATCCATATACTATAGACCCTTTAGGTTGTTTCTTGAACAATGATCCCCATATGTCGCTACATATAGTTCAAGACTCATATTACAGCCTAGGATGTCTAGTTTATTGGATTAGGGTTATTTTAGGCAAAGACAAATATAAAATAACTAATAACATTTAATGGAAAAATATATCAATATTATTTCATTAATATCCGGTCTATGATTATATTCACTATCTACGAGTTTTAGGGCATAAAACCCAACAACGAGATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGATGCATATTTAGATAATCCTCTGTTTGAGAATGATTTAGAACCGCCTGACTTTGTGAATGAATTAGACTTGCCTGCTGGTGAAAATGAAAGATCTGCAGTTGATGATTTACCTTCCTTTGAAAATGAATTAAATTTGCCTGAAATGGATAATTTTGATGATGATATTGAATTGCCTGACTTTGAGGATGAGCATGAAATGCATAAGAAAGATTGCTTGATGGATAATTCTGAGTGTAATCGTGATTACACTGAATCTATTGAGTCTGATCTTGACATTCCTGATTGCATGAACCCTGACAATGTGAATACCTTTGATTCGTGTCCTGATGATGTATATAGCATAGAATCTGACCCAGAGGAGCTCGAATCTGTGCATAGTATAGAATCTGATCCTGAAATTCTTGAATTCTTTAATTCTTCTGATGATGAGTCATATGATAGCTTAGTTGAATCGTTTTTTAATACTAAGTCCGAGGAATCTTCTGAGCGTGCATATATTTTTTCTGATGAATGGACTGACATGATTGATAGGCCATCTTTAGATCCTAGACCGGTAGATATCATAACGCTTGATGACTCTGTTAACAATTGTTTTGTGAATAGAGATTTAGAAAAGAGATTTGATGCAGCTGATTATTTTCTGAAATGTTATTATGATAATCTCTTTAGTGAGGATGGACCAGGGGAAAGTTTTTTTTTCTCCCTTGTTTGTAGTATGCAATTCGGTGCGTGATTTCTTGCAGGGCCCGGAGGATGATGAAAATTTTTATTTTGAGCCTCCGTAAGCGTGCCGAGCCTAGTCTAGCTAAAGACGTTAAAGAAAGCGCTGCTTGGGAGGCAACCCAAGGATTAAAGTTTAGATAGTTGTTTTTGCGGTAAATAATTTTCTTTGCTTCGTGATCCAATATTGTTTTGCAGGATCACCTTAGCAAATCCCAAAATTCCAAATTTCCCATTTTTTTTGATCCAAAGGAAGAGGATGAAGCGCTCCTAGCTGGGGAGACTTAAATATTATGGAATTGCGTGGCTAGAGCTTTCGTTTGGGAAGAATGAACTCAATGAATCTTTGAGGATAAGTTGGTCTTGTATTAATTCTTTTGTACTAGTGTATGATACACTTCTTTGTATTGTTCAAACTATGAGAAATTCTTTTGTAATTATTTTAGATTGGGAGACTATTTTTTTGTAGGTTTGCTTTGTTTTTTTTAGGGGGGCCCTTGTCCCCTACCCATAGTTTTTTTTTTCAAAAAAATTATTTTTTTTTTAAAACAAGAAACATTTTTCATTGATGAAATCAAAAAAGACTAATGCTCAAAGGATACAAACTCAACAAGGTGGAAATAAAAGAGAAACAATAAAAAGCATAAGGTTGTTTCTTGGTATGATCCTTTCTCAATATATATCACTTTCCATGGGGTATTTGACTAGAAAGAAATGATCGTATCTTTAGAGGGAATAAGAGATCAGTGTTTCTTTTATTGATTTAATTTATGGAAAAAATAATTTTAAAAGCAAACATCAATGAAACAAACATGAGTTTTTTTATATTATTACCAAAACACATTTCAAAACCATCGAAACAAACATGGCCTTATTGGAGAACAAACATCAATAAGCAATCTAAACTTCTTTTTTACCATTAAGTAAGAAATGACTATTATTAAACTAAAAGAAGTCATAAGAAAAATAAGGTTTCCACCCACCTCAAGCCAAAAAGATATCACAAAGATTTTCTCGTCGGCAACAACTATGTAGAACAATCACAAAAATGCTCATCTAAAGGCACTTCAAGAGGAGGCAACTAGACAAATCCATAAAAACATATCCATCCCCTCTAATGCCCTCAAATATTATCCCATTCATTATCAGTCTAAATTTAAAAAATGGATACAAGATTTAAAGAGATATTTGACCATAGCTTTTTCCAGAAGAAAAGAAAACTACATATATGTTCCACAAGCTCTTCAGATTCCTAGGGATAAAGAAGAGCATCATAGGATTGATCACAAATAACATTTCCCTTCATTCAATTTACACCTATATTGCAATGACATATATCTAGAATTGTTGAGTAGCAAGAAAAAACTTTACATGATAGAAACTTTTCAAAGAAAACGTACCTTCATTTGAATCATAAGAAGCTACTTCTCGATAATTCCAATTTTTAACAGTACTATTTCGTGAGATGCTAGCTTCTTTTCCAGAGTCAATGATCCCAGATGATTCAAGTGCTTCCTCCTCCTCCATTGATGAAACAAAAGAAACAACACTTTGCTTTGTGACACGTGGCTCCATCAGATGGCTTATGCACTTAACCTGTCCACAGAAAATTCAAAATCCAAATGGTAAAAGTAATTAATTCACAACAAACCCTTTCTATTCAGACGAAAGATTTGCTTCGGCCATAACATTGTCGTAACAAACTTCTGAGCAAAACAAATCTTAGATACAGAAGAATTCAAATTAAAAATAAAATCAAATCAAGAAATTTGAATTAACCGCTCAAATCAAATCTCCCTTTTTTTAAATTTTATTTTTATTCAGAATCGAATAAATCAGGGGAAATTTTATTAAAACCCTAATCTAAACAGAAATTTAAATAACCAAAAATAAAATCTAATCTAAACTAATCAGATTAATTAAAAAGAATAACTCAGTTAAATAAATAAATAAACCGAAAATAAAATCTACAAAAATAAAACCAAAATCAAATAAAATTCAAACTTACCGAATCTGATTTAAAACAATTAAATTCAAAACCAAATCTAATTAAAATACTCCAAATTACACTAAATCAGCGAGGAATAAAATCAAAACAAACACTGGGAGCTCAAAATATTGCTCTGTGAAATGCTCCCGCAAAAATCTTGCTCTGTCATTCATCAACGAGCTTTAGGGAAGGATATTTCGTCTGAAACTCCTCTTCCCAATAATGCTTGACACGCTGTCCATTCACCTTGAACACTCTCCCATCTTTTTCATCCTGCAAAGTAATTGCTCCATGGGGGAAAACTTCAATCACAATAAATGGCCCTGACCATTTAGATTTTAGTTTCCCAAGAAATAATTTTAATCTAGAATTATAAAGCAATACTCTCTGACCTTTGACAAACTCTTTAGGTTTAATTTTCTTGTCATGCCACAACTTAGTCTTTTCTTTATACATTTTCGAATTTTCATAAGAAAATTGGCGAAATTCCTCTAATTCATTAAGCTGCAACATTCTTATTGCCCCTGCACAACTCAGATCAAAATTTAATTTTTTCAAAGCCCAAAATGTTTTATGCTCAAGCTCTAATGGTAAATGACAAGTTTTCCCATATACTAACCTATAGGGAGACATACCTGAGGAGTCTTATAGGCTGTCCTATAAGCCCAAAGAGCCTCATTGATAAGTCCAATTTATTATACACTTAGAATCTCCCAATTTGCTTATCTTAGTTGAGTTCCTTGCGAAAATGCTTTAAAACGAGTATAATATGTCTATAGGTCCTCATCGGAGCTTTGGAAGCAATTCGGGGCTTAAACGAGCGAAACCGAAGTGTAAAATGACAATTCTGCCCCTGGAGCCTCATCAGCGTCGAGACGCTCGTCATACAGAGTCGAGACGCTTGCTCAATAGCGTCGCGACGCTAGGGCAATATGAGAAATATTTTCCAAAATTGAAGGGACAACGTCGAGACGCTTGTTGCATAGCGTCGCGACTCTAG

mRNA sequence

ATGGTAGGCTTATTGAGTCGGCGAACAGGCCACTCTCACCCGTACAAATCAAAGGACAATCTCTCATGGACAGGAGTCCATAATCCACTCAGGATTAAGGCCAAGTTGCCTAGGAGGGATTGTTCTTCGATTTGTATGGATGAGAGTAGCAAGTTCGCCAACTCAATAATCCTACCATTTCAGGGGCAAGACCGAATGGGGGCTGTGAACACAACAGTACAAGATGAAGTTCACTCCTTCCCCTATTGGGATAATCCTCTGTTTGAGAATGATTTAGAACCGCCTGACTTTGTGAATGAATTAGACTTGCCTGCTGGTGAAAATGAAAGATCTGCAGTTGATGATTTACCTTCCTTTGAAAATGAATTAAATTTGCCTGAAATGGATAATTTTGATGATGATATTGAATTGCCTGACTTTGAGGATGAGCATGAAATGCATAAGAAAGATTGCTTGATGGATAATTCTGAGTGTAATCGTGATTACACTGAATCTATTGAGTCTGATCTTGACATTCCTGATTGCATGAACCCTGACAATGTGAATACCTTTGATTCGTGTCCTGATGATGTATATAGCATAGAATCTGACCCAGAGGAGCTCGAATCTGTGCATAGTATAGAATCTGATCCTGAAATTCTTGAATTCTTTAATTCTTCTGATGATGAGTCATATGATAGCTTAGTTGAATCGTTTTTTAATACTAAGTCCGAGGAATCTTCTGAGCGTGCATATATTTTTTCTGATGAATGGACTGACATGATTGATAGGCCATCTTTAGATCCTAGACCGGTAGATATCATAACGCTTGATGACTCTGTTAACAATTGTTTTGTGAATAGAGATTTAGAAAAGAGATTTGATGCAGCTGATTATTTTCTGAAATGTTATTATGATAATCTCTTTAGTGAGGATGGACCAGGGGAAAGTTTTTTTTTCTCCCTTGTTTGTAGTATGCAATTCGTACTATTTCGTGAGATGCTAGCTTCTTTTCCAGAGTCAATGATCCCAGATGATTCAAGTGCTTCCTCCTCCTCCATTGATGAAACAAAAGAAACAACACTTTGCTTTGTGACACGTGGCTCCATCAGATGGCTTATGCACTTAACCTGTCCACAGAAAATTCAAAATCCAAATGGTCCTCATCGGAGCTTTGGAAGCAATTCGGGGCTTAAACGAGCGAAACCGAAGTGTAAAATGACAATTCTGCCCCTGGAGCCTCATCAGCGTCGAGACGCTCGTCATACAGAGTCGAGACGCTTGCTCAATAGCGTCGCGACGCTAGGGCAATATGAGAAATATTTTCCAAAATTGAAGGGACAACGTCGAGACGCTTGTTGCATAGCGTCGCGACTCTAG

Coding sequence (CDS)

ATGGTAGGCTTATTGAGTCGGCGAACAGGCCACTCTCACCCGTACAAATCAAAGGACAATCTCTCATGGACAGGAGTCCATAATCCACTCAGGATTAAGGCCAAGTTGCCTAGGAGGGATTGTTCTTCGATTTGTATGGATGAGAGTAGCAAGTTCGCCAACTCAATAATCCTACCATTTCAGGGGCAAGACCGAATGGGGGCTGTGAACACAACAGTACAAGATGAAGTTCACTCCTTCCCCTATTGGGATAATCCTCTGTTTGAGAATGATTTAGAACCGCCTGACTTTGTGAATGAATTAGACTTGCCTGCTGGTGAAAATGAAAGATCTGCAGTTGATGATTTACCTTCCTTTGAAAATGAATTAAATTTGCCTGAAATGGATAATTTTGATGATGATATTGAATTGCCTGACTTTGAGGATGAGCATGAAATGCATAAGAAAGATTGCTTGATGGATAATTCTGAGTGTAATCGTGATTACACTGAATCTATTGAGTCTGATCTTGACATTCCTGATTGCATGAACCCTGACAATGTGAATACCTTTGATTCGTGTCCTGATGATGTATATAGCATAGAATCTGACCCAGAGGAGCTCGAATCTGTGCATAGTATAGAATCTGATCCTGAAATTCTTGAATTCTTTAATTCTTCTGATGATGAGTCATATGATAGCTTAGTTGAATCGTTTTTTAATACTAAGTCCGAGGAATCTTCTGAGCGTGCATATATTTTTTCTGATGAATGGACTGACATGATTGATAGGCCATCTTTAGATCCTAGACCGGTAGATATCATAACGCTTGATGACTCTGTTAACAATTGTTTTGTGAATAGAGATTTAGAAAAGAGATTTGATGCAGCTGATTATTTTCTGAAATGTTATTATGATAATCTCTTTAGTGAGGATGGACCAGGGGAAAGTTTTTTTTTCTCCCTTGTTTGTAGTATGCAATTCGTACTATTTCGTGAGATGCTAGCTTCTTTTCCAGAGTCAATGATCCCAGATGATTCAAGTGCTTCCTCCTCCTCCATTGATGAAACAAAAGAAACAACACTTTGCTTTGTGACACGTGGCTCCATCAGATGGCTTATGCACTTAACCTGTCCACAGAAAATTCAAAATCCAAATGGTCCTCATCGGAGCTTTGGAAGCAATTCGGGGCTTAAACGAGCGAAACCGAAGTGTAAAATGACAATTCTGCCCCTGGAGCCTCATCAGCGTCGAGACGCTCGTCATACAGAGTCGAGACGCTTGCTCAATAGCGTCGCGACGCTAGGGCAATATGAGAAATATTTTCCAAAATTGAAGGGACAACGTCGAGACGCTTGTTGCATAGCGTCGCGACTCTAG

Protein sequence

MVGLLSRRTGHSHPYKSKDNLSWTGVHNPLRIKAKLPRRDCSSICMDESSKFANSIILPFQGQDRMGAVNTTVQDEVHSFPYWDNPLFENDLEPPDFVNELDLPAGENERSAVDDLPSFENELNLPEMDNFDDDIELPDFEDEHEMHKKDCLMDNSECNRDYTESIESDLDIPDCMNPDNVNTFDSCPDDVYSIESDPEELESVHSIESDPEILEFFNSSDDESYDSLVESFFNTKSEESSERAYIFSDEWTDMIDRPSLDPRPVDIITLDDSVNNCFVNRDLEKRFDAADYFLKCYYDNLFSEDGPGESFFFSLVCSMQFVLFREMLASFPESMIPDDSSASSSSIDETKETTLCFVTRGSIRWLMHLTCPQKIQNPNGPHRSFGSNSGLKRAKPKCKMTILPLEPHQRRDARHTESRRLLNSVATLGQYEKYFPKLKGQRRDACCIASRL

Homology

[Close]

BLAST of Lag0001091 vs. NCBI nr
Match: KAA0062645.1 (flocculation protein FLO11-like [Cucumis melo var. makuwa] >TYK01179.1 flocculation protein FLO11-like [Cucumis melo var. makuwa])

HSP 1 Score: 58.9 bits (141), Expect = 1.3e-04
Identity = 26/38 (68.42%), Postives = 30/38 (78.95%), Query Frame = 0


Query: 1  MVGLLSRRTGHSHPYKSKDNLSWTGVHNPLRIKAKLPR 39
          M+ +LSR+ G+SHPYKSKDN   TGVHN LRIK K PR
Sbjct: 15 MISILSRQFGYSHPYKSKDNSLQTGVHNTLRIKTKSPR 52

[Close]

BLAST of Lag0001091 vs. ExPASy TrEMBL
Match: A0A5A7V9U3 (Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2044G00200 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 6.2e-05
Identity = 26/38 (68.42%), Postives = 30/38 (78.95%), Query Frame = 0


Query: 1  MVGLLSRRTGHSHPYKSKDNLSWTGVHNPLRIKAKLPR 39
          M+ +LSR+ G+SHPYKSKDN   TGVHN LRIK K PR
Sbjct: 15 MISILSRQFGYSHPYKSKDNSLQTGVHNTLRIKTKSPR 52

The following BLAST results are available for this feature:

BLAST of Lag0001091 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0062645.1	1.3e-04	68.42	flocculation protein FLO11-like [Cucumis melo var. makuwa] >TYK01179.1 flocculat...	[more]

BLAST of Lag0001091 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0001091 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V9U3	6.2e-05	68.42	Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]

BLAST of Lag0001091 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0001091.1	Lag0001091.1	mRNA