Lag0001066 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAATTGATGGAACCCCTCGTGATAAACCCTTTTCACCCTGATAAAGCTCTTCTTAAATGCCTCTCGAGTGATTTGGTTGATATTTTGACTAAAAATAAAGGATGGGTGAGCTTTTATCCATTGATATTAAAAGTTGAAAAATGGGACAAAAGGAAGCATCATCGAATTAACTGCGTTCCATCCTATGGAGGTTGGGTTTGTCTGAGAAATCTACCGCTACATTTATGGCATTTAGAAACATTTAAGGAGATTGGTGACAACCTCAGTGGATTTATTGAATTTGCAGAGCCAAACTCTTTATTGCTAGATTGTGTGGAAGTGAGAGTGAAGATCAAAGAAAACTATTGTGGATTTATTCCGGTCGAAGTAAAAGTCAGTGATGGCGAAGAATCTTTTAATGTGCAGGTTGTCACCTTCCAAGACGGAAATTTGCTGATAAACCGTGTTGCCAGAATCCATGGAAGTTTCCTCCCGTCGGCAGCACATGTCTTTCACAGAGGCCCAACAGATCCTTCCTTTAGTTCAACGGATATTTGGCGGATCGAAGATGGAAATGAATATCTAGAGGTTATTATCCACAACTCAAAGGATCAAATCACTGAAAGTGGAAGACAACTGGAAAAGCGTTTTGAATTATCCCGCCAAAAAGTAAACGAGAGTTGGGCTGAGGAAGCTGGGCCGTCAAATGGTGCGGTTATACAACTTAAACAAGGAACTAAGGGCCCAACTCAAAATGAAAGTGGTAGAAATAGAAAAAATAGCCCATCGGGTACCAAAAGAAAGGGGAAGGGAGTGTCCTTTGCTAGAGAGGCCCAAGTGTCCACATTAAAATGTGGAGATATCCAGTTCACAGACAATGATAGAGACCCACCGAGTGCTAGTCACACGTGCTCGAATTGGTATGGGGAGTATGAGATAGACTCTGATCTATCCTTATCAAGTCCAGCAAGCTAA ATGCAATTGATGGAACCCCTCGTGATAAACCCTTTTCACCCTGATAAAGCTCTTCTTAAATGCCTCTCGAGTGATTTGGTTGATATTTTGACTAAAAATAAAGGATGGGTGAGCTTTTATCCATTGATATTAAAAGTTGAAAAATGGGACAAAAGGAAGCATCATCGAATTAACTGCGTTCCATCCTATGGAGGTTGGGTTTGTCTGAGAAATCTACCGCTACATTTATGGCATTTAGAAACATTTAAGGAGATTGGTGACAACCTCAGTGGATTTATTGAATTTGCAGAGCCAAACTCTTTATTGCTAGATTGTGTGGAAGTGAGAGTGAAGATCAAAGAAAACTATTGTGGATTTATTCCGGTCGAAGTAAAAGTCAGTGATGGCGAAGAATCTTTTAATGTGCAGGTTGTCACCTTCCAAGACGGAAATTTGCTGATAAACCGTGTTGCCAGAATCCATGGAAGTTTCCTCCCGTCGGCAGCACATGTCTTTCACAGAGGCCCAACAGATCCTTCCTTTAGTTCAACGGATATTTGGCGGATCGAAGATGGAAATGAATATCTAGAGGTTATTATCCACAACTCAAAGGATCAAATCACTGAAAGTGGAAGACAACTGGAAAAGCGTTTTGAATTATCCCGCCAAAAAGTAAACGAGAGTTGGGCTGAGGAAGCTGGGCCGTCAAATGGTGCGGTTATACAACTTAAACAAGGAACTAAGGGCCCAACTCAAAATGAAAGTGGTAGAAATAGAAAAAATAGCCCATCGGGTACCAAAAGAAAGGGGAAGGGAGTGTCCTTTGCTAGAGAGGCCCAAGTGTCCACATTAAAATGTGGAGATATCCAGTTCACAGACAATGATAGAGACCCACCGAGTGCTAGTCACACGTGCTCGAATTGGTATGGGGAGTATGAGATAGACTCTGATCTATCCTTATCAAGTCCAGCAAGCTAA ATGCAATTGATGGAACCCCTCGTGATAAACCCTTTTCACCCTGATAAAGCTCTTCTTAAATGCCTCTCGAGTGATTTGGTTGATATTTTGACTAAAAATAAAGGATGGGTGAGCTTTTATCCATTGATATTAAAAGTTGAAAAATGGGACAAAAGGAAGCATCATCGAATTAACTGCGTTCCATCCTATGGAGGTTGGGTTTGTCTGAGAAATCTACCGCTACATTTATGGCATTTAGAAACATTTAAGGAGATTGGTGACAACCTCAGTGGATTTATTGAATTTGCAGAGCCAAACTCTTTATTGCTAGATTGTGTGGAAGTGAGAGTGAAGATCAAAGAAAACTATTGTGGATTTATTCCGGTCGAAGTAAAAGTCAGTGATGGCGAAGAATCTTTTAATGTGCAGGTTGTCACCTTCCAAGACGGAAATTTGCTGATAAACCGTGTTGCCAGAATCCATGGAAGTTTCCTCCCGTCGGCAGCACATGTCTTTCACAGAGGCCCAACAGATCCTTCCTTTAGTTCAACGGATATTTGGCGGATCGAAGATGGAAATGAATATCTAGAGGTTATTATCCACAACTCAAAGGATCAAATCACTGAAAGTGGAAGACAACTGGAAAAGCGTTTTGAATTATCCCGCCAAAAAGTAAACGAGAGTTGGGCTGAGGAAGCTGGGCCGTCAAATGGTGCGGTTATACAACTTAAACAAGGAACTAAGGGCCCAACTCAAAATGAAAGTGGTAGAAATAGAAAAAATAGCCCATCGGGTACCAAAAGAAAGGGGAAGGGAGTGTCCTTTGCTAGAGAGGCCCAAGTGTCCACATTAAAATGTGGAGATATCCAGTTCACAGACAATGATAGAGACCCACCGAGTGCTAGTCACACGTGCTCGAATTGGTATGGGGAGTATGAGATAGACTCTGATCTATCCTTATCAAGTCCAGCAAGCTAA MQLMEPLVINPFHPDKALLKCLSSDLVDILTKNKGWVSFYPLILKVEKWDKRKHHRINCVPSYGGWVCLRNLPLHLWHLETFKEIGDNLSGFIEFAEPNSLLLDCVEVRVKIKENYCGFIPVEVKVSDGEESFNVQVVTFQDGNLLINRVARIHGSFLPSAAHVFHRGPTDPSFSSTDIWRIEDGNEYLEVIIHNSKDQITESGRQLEKRFELSRQKVNESWAEEAGPSNGAVIQLKQGTKGPTQNESGRNRKNSPSGTKRKGKGVSFAREAQVSTLKCGDIQFTDNDRDPPSASHTCSNWYGEYEIDSDLSLSSPAS Homology
BLAST of Lag0001066 vs. NCBI nr
Match: XP_022149859.1 (uncharacterized protein LOC111018186 [Momordica charantia] >XP_022149860.1 uncharacterized protein LOC111018186 [Momordica charantia]) HSP 1 Score: 200.3 bits (508), Expect = 2.5e-47 Identity = 88/181 (48.62%), Postives = 117/181 (64.64%), Query Frame = 0
BLAST of Lag0001066 vs. NCBI nr
Match: KAA0039949.1 (hypothetical protein E6C27_scaffold122G002290 [Cucumis melo var. makuwa] >TYK24554.1 hypothetical protein E5676_scaffold266G00990 [Cucumis melo var. makuwa]) HSP 1 Score: 147.5 bits (371), Expect = 1.9e-31 Identity = 98/291 (33.68%), Postives = 143/291 (49.14%), Query Frame = 0
BLAST of Lag0001066 vs. NCBI nr
Match: KAA0044557.1 (hypothetical protein E6C27_scaffold46G003060 [Cucumis melo var. makuwa]) HSP 1 Score: 146.4 bits (368), Expect = 4.3e-31 Identity = 68/157 (43.31%), Postives = 91/157 (57.96%), Query Frame = 0
BLAST of Lag0001066 vs. NCBI nr
Match: KAA0050054.1 (hypothetical protein E6C27_scaffold675G00340 [Cucumis melo var. makuwa]) HSP 1 Score: 146.4 bits (368), Expect = 4.3e-31 Identity = 68/165 (41.21%), Postives = 100/165 (60.61%), Query Frame = 0
BLAST of Lag0001066 vs. NCBI nr
Match: TYK10355.1 (hypothetical protein E5676_scaffold367G00330 [Cucumis melo var. makuwa]) HSP 1 Score: 146.4 bits (368), Expect = 4.3e-31 Identity = 68/165 (41.21%), Postives = 100/165 (60.61%), Query Frame = 0
BLAST of Lag0001066 vs. ExPASy TrEMBL
Match: A0A6J1D6X4 (uncharacterized protein LOC111018186 OS=Momordica charantia OX=3673 GN=LOC111018186 PE=4 SV=1) HSP 1 Score: 200.3 bits (508), Expect = 1.2e-47 Identity = 88/181 (48.62%), Postives = 117/181 (64.64%), Query Frame = 0
BLAST of Lag0001066 vs. ExPASy TrEMBL
Match: A0A5D3DLT1 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00990 PE=4 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 9.4e-32 Identity = 98/291 (33.68%), Postives = 143/291 (49.14%), Query Frame = 0
BLAST of Lag0001066 vs. ExPASy TrEMBL
Match: A0A5A7U495 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00340 PE=4 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 2.1e-31 Identity = 68/165 (41.21%), Postives = 100/165 (60.61%), Query Frame = 0
BLAST of Lag0001066 vs. ExPASy TrEMBL
Match: A0A5A7TRS9 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003060 PE=4 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 2.1e-31 Identity = 68/157 (43.31%), Postives = 91/157 (57.96%), Query Frame = 0
BLAST of Lag0001066 vs. ExPASy TrEMBL
Match: A0A5D3CFS8 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00330 PE=4 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 2.1e-31 Identity = 68/165 (41.21%), Postives = 100/165 (60.61%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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