Lag0000995 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0000995
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr4: 21675572 .. 21676631 (-)
RNA-Seq ExpressionLag0000995
SyntenyLag0000995
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGCTACTACGAGACCGATGCTGCGAAGCTAGGTGGTGCTATTATGGCGGGGGAAGGGTCGACTTCTGCTCCATCGGAATGCTTTTTGTGGCAGGTCTTTCTATTACCGATATGGACCTCACTAAAGGGTCTCGTTCTGTATCTAGGTCTCGATCTATATCACTAAGGTCAGTATATGAATCTGCTGCGTCTTTTATCTCAGGTCTTGGATCACCTACTAACTACTGCGCTGCGACAAGGACTGGACCTGGAACCATACGAAGGGGGGGGGTGTATAGGTCTCGATCACGTGGTTGGGGTATCGATCTGGAGCTACTGCATATGCGACTGGGTCACCCAGGTATTTGAGCTATGTATGGATCCACTTTGTATGGATCACTGGCTAAGGCTGGCTTAGATGGGCTTGACTTAGACGGCTTAATAGATGGCTTAATCTGCATAATCTACTGAATCCACTTAAGCTTAGTTCACTAAGTCAACTGCCTATATATACCCCAGTTCCTTTCCCCGCCCGGGTATGGATTTTGAACCTTTTCAAAAATTGATGGCATTAAAAAAGCTCTGTACGGTGAGTAACCCAGATAATAATAGGATAATGAAAGATCTCTTTAAATGAAAAAAGTATACAGCAGGATCTTGGTATGGGTCGACTAGTCATAAGTGGATATGCTGTTAGCTCTACCGGAGATAGGTATGGAAGCCACTATGAGTATATATCTAGGTATGCTTCTAGATAAGGAACTGAACCTCACGCCATAAACGGAATCCCTATCCTTCGCTTTATCGGGCGCGTGAGAGAACGAAGGAGAGCATTAAGCCAATAAGCCGGTCCATCAGCAGTCAGTCTCCGTGACGGAAAAAGCGGCATCGTTGACTCCAGAGAAGTAAGCGAAGGACCGTCGGTAAGCTGCTCCGGTATCGGCAGCATTCCTTATCTATCGTGGAGCTCGGTAGTATTCGCAGTATTAGTCTCAGTAGCATTTCTTATGGCAGCGGCAGAAGCACTGACTGACGTTGTGAGCATCTCGGGTGTGAAGGAACGGCATCGGCAGCGGTAG

mRNA sequence

ATGTGCTACTACGAGACCGATGCTGCGAAGCTAGGTGGTGCTATTATGGCGGGGGAAGGGTCGACTTCTGCTCCATCGGAATGCTTTTTGTGGCAGGTCTTGGATCACCTACTAACTACTGCGCTGCGACAAGGACTGGACCTGGAACCATACGAAGGGGGGGGGTGTATAGGTCTCGATCACGTGGTTGGGGTATCGATCTGGAGCTACTGCATATGCGACTGGGTCACCCAGGATCTTGGTATGGGTCGACTAGTCATAAGTGGATATGCTGTTAGCTCTACCGGAGATAGGTATGGAAGCCACTATGAGTATATATCTAGTCTCCGTGACGGAAAAAGCGGCATCGTTGACTCCAGAGAAGTAAGCGAAGGACCGTCGGTAAGCTGCTCCGGTATCGGCAGCATTCCTTATCTATCGTGGAGCTCGGTAGTATTCGCAGTATTAGTCTCAGTAGCATTTCTTATGGCAGCGGCAGAAGCACTGACTGACGTTGTGAGCATCTCGGGTGTGAAGGAACGGCATCGGCAGCGGTAG

Coding sequence (CDS)

ATGTGCTACTACGAGACCGATGCTGCGAAGCTAGGTGGTGCTATTATGGCGGGGGAAGGGTCGACTTCTGCTCCATCGGAATGCTTTTTGTGGCAGGTCTTGGATCACCTACTAACTACTGCGCTGCGACAAGGACTGGACCTGGAACCATACGAAGGGGGGGGGTGTATAGGTCTCGATCACGTGGTTGGGGTATCGATCTGGAGCTACTGCATATGCGACTGGGTCACCCAGGATCTTGGTATGGGTCGACTAGTCATAAGTGGATATGCTGTTAGCTCTACCGGAGATAGGTATGGAAGCCACTATGAGTATATATCTAGTCTCCGTGACGGAAAAAGCGGCATCGTTGACTCCAGAGAAGTAAGCGAAGGACCGTCGGTAAGCTGCTCCGGTATCGGCAGCATTCCTTATCTATCGTGGAGCTCGGTAGTATTCGCAGTATTAGTCTCAGTAGCATTTCTTATGGCAGCGGCAGAAGCACTGACTGACGTTGTGAGCATCTCGGGTGTGAAGGAACGGCATCGGCAGCGGTAG

Protein sequence

MCYYETDAAKLGGAIMAGEGSTSAPSECFLWQVLDHLLTTALRQGLDLEPYEGGGCIGLDHVVGVSIWSYCICDWVTQDLGMGRLVISGYAVSSTGDRYGSHYEYISSLRDGKSGIVDSREVSEGPSVSCSGIGSIPYLSWSSVVFAVLVSVAFLMAAAEALTDVVSISGVKERHRQR
Homology
[Close]
BLAST of Lag0000995 vs. NCBI nr
Match: GAU44004.1 (hypothetical protein TSUD_285580 [Trifolium subterraneum])

HSP 1 Score: 72.4 bits (176), Expect = 4.4e-09
Identity = 40/60 (66.67%), Postives = 42/60 (70.00%), Query Frame = 0 

Query: 1  MCYYETDAAKLGGAIMAGEGSTSAPSECFLWQ----------VLDHLLTTALRQGLDLEP 51
          MCYY  DAAKLGGAIMAGEGSTSAP+    WQ          VLDHLLTTALRQG +L P
Sbjct: 1  MCYYYPDAAKLGGAIMAGEGSTSAPN-AGRWQYMNLLRLLSLVLDHLLTTALRQGQELPP 59

[Close]
BLAST of Lag0000995 vs. NCBI nr
Match: KAF1899186.1 (hypothetical protein Lal_00019308 [Lupinus albus])

HSP 1 Score: 66.6 bits (161), Expect = 2.4e-07
Identity = 30/33 (90.91%), Postives = 30/33 (90.91%), Query Frame = 0 

Query: 1  MCYYETDAAKLGGAIMAGEGSTSAPSECFLWQV 34
          MCYY  DAAKLGGAIMAGEGSTSAPSECF WQV
Sbjct: 1  MCYYYPDAAKLGGAIMAGEGSTSAPSECFWWQV 33

The following BLAST results are available for this feature:
BLAST of Lag0000995 vs. NCBI nr
Match NameE-valueIdentityDescription
GAU44004.14.4e-0966.67hypothetical protein TSUD_285580 [Trifolium subterraneum][more]
KAF1899186.12.4e-0790.91hypothetical protein Lal_00019308 [Lupinus albus][more]
BLAST of Lag0000995 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0000995.1Lag0000995.1mRNA