Lag0000763 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCATTCAAGACTTCTTCAATGGGCACTGTCAGGAACAAGTCTTACATGGGTTCTACTGCCCATTGTTGCTTCAATGAACTGAGGTTGCAAGAAGATAAAGCTTCTATCATTGCAAGCGAAGAAACAACATTGCAGGGGGCATGTACCAATGACAAGTCTCTTATTAAGTATAACCCTTTGTTTGAACCTGATTCTGACGTAGTGACTGTTATGATGACTGAGACAAGAACTATGGAAGAAAGAATGGCTGAGATGCAGGAGCACATCAACACCTTGATGAAGGCGATTGAAGAAAAAGATTCTCAAATTGAGCACCTAAAGAATCAGATTGAAAACCAGCATATCACTGAATCAAGTCAAATCCAAGTCATAAAAAATAACGACAAAGGAAAGACTATAGTGCAAGATCATCAGCCACAGTGTTCTACTTCGAACGCTTCACTATCCAGTCAATAG ATGTCATTCAAGACTTCTTCAATGGGCACTGTCAGGAACAAGTCTTACATGGGTTCTACTGCCCATTGTTGCTTCAATGAACTGAGGTTGCAAGAAGATAAAGCTTCTATCATTGCAAGCGAAGAAACAACATTGCAGGGGGCATGTACCAATGACAAGTCTCTTATTAAGTATAACCCTTTGTTTGAACCTGATTCTGACGTAGTGACTGTTATGATGACTGAGACAAGAACTATGGAAGAAAGAATGGCTGAGATGCAGGAGCACATCAACACCTTGATGAAGGCGATTGAAGAAAAAGATTCTCAAATTGAGCACCTAAAGAATCAGATTGAAAACCAGCATATCACTGAATCAAGTCAAATCCAAGTCATAAAAAATAACGACAAAGGAAAGACTATAGTGCAAGATCATCAGCCACAGTGTTCTACTTCGAACGCTTCACTATCCAGTCAATAG ATGTCATTCAAGACTTCTTCAATGGGCACTGTCAGGAACAAGTCTTACATGGGTTCTACTGCCCATTGTTGCTTCAATGAACTGAGGTTGCAAGAAGATAAAGCTTCTATCATTGCAAGCGAAGAAACAACATTGCAGGGGGCATGTACCAATGACAAGTCTCTTATTAAGTATAACCCTTTGTTTGAACCTGATTCTGACGTAGTGACTGTTATGATGACTGAGACAAGAACTATGGAAGAAAGAATGGCTGAGATGCAGGAGCACATCAACACCTTGATGAAGGCGATTGAAGAAAAAGATTCTCAAATTGAGCACCTAAAGAATCAGATTGAAAACCAGCATATCACTGAATCAAGTCAAATCCAAGTCATAAAAAATAACGACAAAGGAAAGACTATAGTGCAAGATCATCAGCCACAGTGTTCTACTTCGAACGCTTCACTATCCAGTCAATAG MSFKTSSMGTVRNKSYMGSTAHCCFNELRLQEDKASIIASEETTLQGACTNDKSLIKYNPLFEPDSDVVTVMMTETRTMEERMAEMQEHINTLMKAIEEKDSQIEHLKNQIENQHITESSQIQVIKNNDKGKTIVQDHQPQCSTSNASLSSQ Homology
BLAST of Lag0000763 vs. NCBI nr
Match: KAA0050337.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK03551.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 83.6 bits (205), Expect = 1.6e-12 Identity = 50/102 (49.02%), Postives = 72/102 (70.59%), Query Frame = 0
BLAST of Lag0000763 vs. NCBI nr
Match: TYK03695.1 (retrotransposon gag protein [Cucumis melo var. makuwa]) HSP 1 Score: 83.6 bits (205), Expect = 1.6e-12 Identity = 60/164 (36.59%), Postives = 86/164 (52.44%), Query Frame = 0
BLAST of Lag0000763 vs. NCBI nr
Match: KAA0051994.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK04565.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 82.8 bits (203), Expect = 2.8e-12 Identity = 46/89 (51.69%), Postives = 66/89 (74.16%), Query Frame = 0
BLAST of Lag0000763 vs. NCBI nr
Match: KAA0050518.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 82.8 bits (203), Expect = 2.8e-12 Identity = 47/89 (52.81%), Postives = 65/89 (73.03%), Query Frame = 0
BLAST of Lag0000763 vs. NCBI nr
Match: KAA0034095.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 82.0 bits (201), Expect = 4.8e-12 Identity = 49/102 (48.04%), Postives = 70/102 (68.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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