Lag0000706 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0000706
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	L10-interacting MYB domain-containing protein-like
Location	chr4: 13718096 .. 13719237 (-)
RNA-Seq Expression	Lag0000706
Synteny	Lag0000706

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGGGATCCATTATGGGCATCGCTCCCAGTGGAATGATCTTTTTAAGGTATAAATTAATAGCAACTGTTTTCCACTTCAATGTCTAATCATCTATTGAACTATGGTTGATTTTATGTATTATTGTGAAATTTCTTATAGGTCAATAGGAGAGCTAAGAGGTTTAAAAAAAGTGGTTGCTCGCATTATGCAAAGCTTATGAAATTTTTTGGAGATACTACAGCTACAGGTGCTAGTGCTTGTCCATCAACAAAGCTTCCTTCAGATTCTGAAGATGAAAATGATGTTGGAAGCAATACAAATTTTACTGGTGAAGACAATGGTCCTGAAAAAAAAGTAGAAAACAAGTTCGAAGGAAGAAAGATGAATTTAGTAGTTTCATTTCTTCATTTATAGATGTGTATGCTGAGAATGCCAAGAGAAGAAATGACATCCTTGAGAAAAGATCTCTTAATTCTACTATTAGTCAAGTTGGGAAAGGTCAGACATCAAAAGAAAAAGATGATGTCGATGAAGAGTTGATGGAATGCTTCAAAATTTTGAATGCAATGTAGGATCTAGATGGAAAGGCTTATACTAAAGTACTCAAACTATTGCATGGAGATGTTGCTTGGAGAAAGTTATTTTTGCTTATGACTGATGCGAGGAGGAAAGATTTCACTCGTAGTATCTAGGTGTCGCTTTTGTTTGGTTTGAGCTTAGATTGATTTGTTACTTTTTGGAGTTTTGTCATTTTTTCATATATGAAACCTAAACATCGAATTATATGTGGTTTGTTTTTGTGGTTTTATGTTCCTTACAAATGAACATTTTGAATGTGATTCACATTTCTTTCTCTTTCTCTCTTATTTATTCATGTTTAGATTTTTTTTTCTTACTTATGTTTGATTCAGGAGTATTCTCATGGAACTCTTTCAACGTCATATTGAGATGAATTTAATTGAAGACAATGACTTTGAGAATTGTGATTCTGGCGACGATGATGATGCTCTATACATCTTTTTCAATTTATTGTATGTTGGTTTTCACAAGATGCGATCTTCTAGACAACCATGTAGGACGTCTTCACTAAAAGGTCATGATTATGTGATCAAGTTGTTAAATGGAAACGCACAAGATATTTTGATTGCTTTAGGATGA

mRNA sequence

ATGGTTGGGATCCATTATGGGCATCGCTCCCAGTGGAATGATCTTTTTAAGGTCAATAGGAGAGCTAAGAGGTTTAAAAAAAGTGGTTGCTCGCATTATGCAAAGCTTATGAAATTTTTTGGAGATACTACAGCTACAGGTGCTAGTGCTTGTCCATCAACAAAGCTTCCTTCAGATTCTGAAGATGAAAATGATGTTGGAAGCAATACAAATTTTACTGATGTGTATGCTGAGAATGCCAAGAGAAGAAATGACATCCTTGAGAAAAGATCTCTTAATTCTACTATTAGTCAAGTTGGGAAAGGTCAGACATCAAAAGAAAAAGATGATGTCGATGAAGAGTTGATGGAATGCTTCAAAATTTTGAATGCAATGAGTATTCTCATGGAACTCTTTCAACGTCATATTGAGATGAATTTAATTGAAGACAATGACTTTGAGAATTGTGATTCTGGCGACGATGATGATGCTCTATACATCTTTTTCAATTTATTGTATGTTGGTTTTCACAAGATGCGATCTTCTAGACAACCATGTAGGACGTCTTCACTAAAAGGTCATGATTATGTGATCAAGTTGTTAAATGGAAACGCACAAGATATTTTGATTGCTTTAGGATGA

Coding sequence (CDS)

ATGGTTGGGATCCATTATGGGCATCGCTCCCAGTGGAATGATCTTTTTAAGGTCAATAGGAGAGCTAAGAGGTTTAAAAAAAGTGGTTGCTCGCATTATGCAAAGCTTATGAAATTTTTTGGAGATACTACAGCTACAGGTGCTAGTGCTTGTCCATCAACAAAGCTTCCTTCAGATTCTGAAGATGAAAATGATGTTGGAAGCAATACAAATTTTACTGATGTGTATGCTGAGAATGCCAAGAGAAGAAATGACATCCTTGAGAAAAGATCTCTTAATTCTACTATTAGTCAAGTTGGGAAAGGTCAGACATCAAAAGAAAAAGATGATGTCGATGAAGAGTTGATGGAATGCTTCAAAATTTTGAATGCAATGAGTATTCTCATGGAACTCTTTCAACGTCATATTGAGATGAATTTAATTGAAGACAATGACTTTGAGAATTGTGATTCTGGCGACGATGATGATGCTCTATACATCTTTTTCAATTTATTGTATGTTGGTTTTCACAAGATGCGATCTTCTAGACAACCATGTAGGACGTCTTCACTAAAAGGTCATGATTATGTGATCAAGTTGTTAAATGGAAACGCACAAGATATTTTGATTGCTTTAGGATGA

Protein sequence

MVGIHYGHRSQWNDLFKVNRRAKRFKKSGCSHYAKLMKFFGDTTATGASACPSTKLPSDSEDENDVGSNTNFTDVYAENAKRRNDILEKRSLNSTISQVGKGQTSKEKDDVDEELMECFKILNAMSILMELFQRHIEMNLIEDNDFENCDSGDDDDALYIFFNLLYVGFHKMRSSRQPCRTSSLKGHDYVIKLLNGNAQDILIALG

Homology

[Close]

BLAST of Lag0000706 vs. NCBI nr
Match: TYJ96795.1 (L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa] >TYK00864.1 L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa] >TYK19200.1 L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 154.1 bits (388), Expect = 1.3e-33
Identity = 85/145 (58.62%), Postives = 97/145 (66.90%), Query Frame = 0


Query: 11  QWNDLFKVNRRAKRFKKSGCSHYAKLMKFFGDTTATGASACPSTKLPSDSED--ENDVGS 70
           QWN+LFKVN+RAK+F+KSGC HY KL++ FGDTTATG +ACPST+L SDSED  ENDV S
Sbjct: 19  QWNELFKVNKRAKKFRKSGCPHYEKLVRIFGDTTATGVNACPSTRLISDSEDENENDVAS 78

Query: 71  NTN----------------------------FTDVYAENAKRRNDILEKRSLNSTISQVG 126
           NTN                            F DVYAENAKR+NDILEKRS   T SQV 
Sbjct: 79  NTNVGVEENNKGKSKKRFRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSSQVD 138

[Close]

BLAST of Lag0000706 vs. NCBI nr
Match: KAA0061221.1 (L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 154.1 bits (388), Expect = 1.3e-33
Identity = 85/145 (58.62%), Postives = 97/145 (66.90%), Query Frame = 0


Query: 11  QWNDLFKVNRRAKRFKKSGCSHYAKLMKFFGDTTATGASACPSTKLPSDSED--ENDVGS 70
           QWN+LFKVN+RAK+F+KSGC HY KL++ FGDTTATG +ACPST+L SDSED  ENDV S
Sbjct: 19  QWNELFKVNKRAKKFRKSGCPHYEKLVRIFGDTTATGVNACPSTRLISDSEDENENDVAS 78

Query: 71  NTN----------------------------FTDVYAENAKRRNDILEKRSLNSTISQVG 126
           NTN                            F DVYAENAKR+NDILEKRS   T SQV 
Sbjct: 79  NTNVGVEENNKGKSKKRFRRKKDKFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSSQVD 138

[Close]

BLAST of Lag0000706 vs. NCBI nr
Match: TYK21097.1 (L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 154.1 bits (388), Expect = 1.3e-33
Identity = 85/145 (58.62%), Postives = 97/145 (66.90%), Query Frame = 0


Query: 11  QWNDLFKVNRRAKRFKKSGCSHYAKLMKFFGDTTATGASACPSTKLPSDSED--ENDVGS 70
           QWN+LFKVN+RAK+F+KSGC HY KL++ FGDTTATG +ACPST+L SDSED  ENDV S
Sbjct: 91  QWNELFKVNKRAKKFRKSGCPHYEKLVRIFGDTTATGVNACPSTRLISDSEDENENDVAS 150

Query: 71  NTN----------------------------FTDVYAENAKRRNDILEKRSLNSTISQVG 126
           NTN                            F DVYAENAKR+NDILEKRS   T SQV 
Sbjct: 151 NTNVGVEENNKGKSKKRFRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSSQVD 210

[Close]

BLAST of Lag0000706 vs. NCBI nr
Match: TYK06268.1 (L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 154.1 bits (388), Expect = 1.3e-33
Identity = 85/145 (58.62%), Postives = 97/145 (66.90%), Query Frame = 0


Query: 11  QWNDLFKVNRRAKRFKKSGCSHYAKLMKFFGDTTATGASACPSTKLPSDSED--ENDVGS 70
           QWN+LFKVN+RAK+F+KSGC HY KL++ FGDTTATG +ACPST+L SDSED  ENDV S
Sbjct: 19  QWNELFKVNKRAKKFRKSGCPHYEKLVRIFGDTTATGVNACPSTRLISDSEDENENDVAS 78

Query: 71  NTN----------------------------FTDVYAENAKRRNDILEKRSLNSTISQVG 126
           NTN                            F DVYAENAKR+NDILEKRS   T SQV 
Sbjct: 79  NTNVGVEENNKGKSKKRFRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSSQVD 138

[Close]

BLAST of Lag0000706 vs. NCBI nr
Match: KAA0053615.1 (L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 147.9 bits (372), Expect = 9.6e-32
Identity = 84/145 (57.93%), Postives = 96/145 (66.21%), Query Frame = 0


Query: 11  QWNDLFKVNRRAKRFKKSGCSHYAKLMKFFGDTTATGASACPSTKLPSDSED--ENDVGS 70
           QWN+LFKVN+RAK+F+KSGC HY KL++ FGDTTATG +ACPST+L SDSED  ENDV S
Sbjct: 19  QWNELFKVNKRAKKFRKSGCPHYEKLVRIFGDTTATGVNACPSTRLISDSEDENENDVAS 78

Query: 71  NTN----------------------------FTDVYAENAKRRNDILEKRSLNSTISQVG 126
           NTN                            F DVYAENAKR+NDILEKRS     SQV 
Sbjct: 79  NTNVGVEENNKGKSKKRFRRKKDEFDSFFSSFLDVYAENAKRKNDILEKRSFG--CSQVD 138

[Close]

BLAST of Lag0000706 vs. ExPASy TrEMBL
Match: A0A5D3BNQ5 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold233G00100 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 6.5e-34
Identity = 85/145 (58.62%), Postives = 97/145 (66.90%), Query Frame = 0


Query: 11  QWNDLFKVNRRAKRFKKSGCSHYAKLMKFFGDTTATGASACPSTKLPSDSED--ENDVGS 70
           QWN+LFKVN+RAK+F+KSGC HY KL++ FGDTTATG +ACPST+L SDSED  ENDV S
Sbjct: 19  QWNELFKVNKRAKKFRKSGCPHYEKLVRIFGDTTATGVNACPSTRLISDSEDENENDVAS 78

Query: 71  NTN----------------------------FTDVYAENAKRRNDILEKRSLNSTISQVG 126
           NTN                            F DVYAENAKR+NDILEKRS   T SQV 
Sbjct: 79  NTNVGVEENNKGKSKKRFRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSSQVD 138

[Close]

BLAST of Lag0000706 vs. ExPASy TrEMBL
Match: A0A5D3DBS2 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00630 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 6.5e-34
Identity = 85/145 (58.62%), Postives = 97/145 (66.90%), Query Frame = 0


Query: 11  QWNDLFKVNRRAKRFKKSGCSHYAKLMKFFGDTTATGASACPSTKLPSDSED--ENDVGS 70
           QWN+LFKVN+RAK+F+KSGC HY KL++ FGDTTATG +ACPST+L SDSED  ENDV S
Sbjct: 91  QWNELFKVNKRAKKFRKSGCPHYEKLVRIFGDTTATGVNACPSTRLISDSEDENENDVAS 150

Query: 71  NTN----------------------------FTDVYAENAKRRNDILEKRSLNSTISQVG 126
           NTN                            F DVYAENAKR+NDILEKRS   T SQV 
Sbjct: 151 NTNVGVEENNKGKSKKRFRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSSQVD 210

[Close]

BLAST of Lag0000706 vs. ExPASy TrEMBL
Match: A0A5D3C535 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold157G00490 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 6.5e-34
Identity = 85/145 (58.62%), Postives = 97/145 (66.90%), Query Frame = 0


Query: 11  QWNDLFKVNRRAKRFKKSGCSHYAKLMKFFGDTTATGASACPSTKLPSDSED--ENDVGS 70
           QWN+LFKVN+RAK+F+KSGC HY KL++ FGDTTATG +ACPST+L SDSED  ENDV S
Sbjct: 19  QWNELFKVNKRAKKFRKSGCPHYEKLVRIFGDTTATGVNACPSTRLISDSEDENENDVAS 78

Query: 71  NTN----------------------------FTDVYAENAKRRNDILEKRSLNSTISQVG 126
           NTN                            F DVYAENAKR+NDILEKRS   T SQV 
Sbjct: 79  NTNVGVEENNKGKSKKRFRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSSQVD 138

[Close]

BLAST of Lag0000706 vs. ExPASy TrEMBL
Match: A0A5A7V5Z1 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold455G00520 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 6.5e-34
Identity = 85/145 (58.62%), Postives = 97/145 (66.90%), Query Frame = 0


Query: 11  QWNDLFKVNRRAKRFKKSGCSHYAKLMKFFGDTTATGASACPSTKLPSDSED--ENDVGS 70
           QWN+LFKVN+RAK+F+KSGC HY KL++ FGDTTATG +ACPST+L SDSED  ENDV S
Sbjct: 19  QWNELFKVNKRAKKFRKSGCPHYEKLVRIFGDTTATGVNACPSTRLISDSEDENENDVAS 78

Query: 71  NTN----------------------------FTDVYAENAKRRNDILEKRSLNSTISQVG 126
           NTN                            F DVYAENAKR+NDILEKRS   T SQV 
Sbjct: 79  NTNVGVEENNKGKSKKRFRRKKDKFGSFFSSFLDVYAENAKRKNDILEKRSFGCTSSQVD 138

[Close]

BLAST of Lag0000706 vs. ExPASy TrEMBL
Match: A0A5A7UIT7 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold190G001920 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 4.6e-32
Identity = 84/145 (57.93%), Postives = 96/145 (66.21%), Query Frame = 0


Query: 11  QWNDLFKVNRRAKRFKKSGCSHYAKLMKFFGDTTATGASACPSTKLPSDSED--ENDVGS 70
           QWN+LFKVN+RAK+F+KSGC HY KL++ FGDTTATG +ACPST+L SDSED  ENDV S
Sbjct: 19  QWNELFKVNKRAKKFRKSGCPHYEKLVRIFGDTTATGVNACPSTRLISDSEDENENDVAS 78

Query: 71  NTN----------------------------FTDVYAENAKRRNDILEKRSLNSTISQVG 126
           NTN                            F DVYAENAKR+NDILEKRS     SQV 
Sbjct: 79  NTNVGVEENNKGKSKKRFRRKKDEFDSFFSSFLDVYAENAKRKNDILEKRSFG--CSQVD 138

The following BLAST results are available for this feature:

BLAST of Lag0000706 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ96795.1	1.3e-33	58.62	L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa] >T...	[more]
KAA0061221.1	1.3e-33	58.62	L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]	[more]
TYK21097.1	1.3e-33	58.62	L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]	[more]
TYK06268.1	1.3e-33	58.62	L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]	[more]
KAA0053615.1	9.6e-32	57.93	L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]	[more]

BLAST of Lag0000706 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0000706 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BNQ5	6.5e-34	58.62	L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O...	[more]
A0A5D3DBS2	6.5e-34	58.62	L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O...	[more]
A0A5D3C535	6.5e-34	58.62	L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O...	[more]
A0A5A7V5Z1	6.5e-34	58.62	L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O...	[more]
A0A5A7UIT7	4.6e-32	57.93	L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa O...	[more]

BLAST of Lag0000706 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..71

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0000706.1	Lag0000706.1	mRNA