Lag0000672 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0000672
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUlp1-like peptidase
Locationchr4: 12408047 .. 12408574 (+)
RNA-Seq ExpressionLag0000672
SyntenyLag0000672
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTATAGAAGCAGTAATGTGATTTTTGAGAACGACGATGATGCAGTGAAGGTACCACTTGTGTGTACTACACAAAGCTTACGATGTTGGGGAAGGACAAATTGAAGACATCAGTTAACGAATCATTTTCTAGGACATTGAGCAATTGACATACTTTAACAACCTTAACTGGGGTACAAGAATTTTGGAGGACAATCAAGGGGCTACAGATTGCCCTCGAGGATAGGGTGGACACATTTAAGAAGAAGTTGAAGGAGAAAAGGGACCACATAGTGAAGTATAGTCTCAGCAGCTTTTCTCATGTGTTACAGGTAGATTAATGCAAGCTTGTATATTGGGTGTTTTATTATAGATGTATCCATATCTTGGAGCGGTCCCATGATTTCCATGCAAACTGAGGCATGTGTATTTCTGTTGTTATAGGTACAGGCATACAAGACCCTATCAACTATAGAAGGCAAGGCTGCAAAGCGAATGAGGCCCGATGCGTTGCCCCGCATCCTTCGATGGTCATGCAAACAGTAA

mRNA sequence

ATGGAGTATAGAAGCAGTAATGTGATTTTTGAGAACGACGATGATGCAGTGAAGGGGCTACAGATTGCCCTCGAGGATAGGGTGGACACATTTAAGAAGAAGTTGAAGGAGAAAAGGGACCACATAGTGAAGTATAGTCTCAGCAGCTTTTCTCATGTGTTACAGGTACAGGCATACAAGACCCTATCAACTATAGAAGGCAAGGCTGCAAAGCGAATGAGGCCCGATGCGTTGCCCCGCATCCTTCGATGGTCATGCAAACAGTAA

Coding sequence (CDS)

ATGGAGTATAGAAGCAGTAATGTGATTTTTGAGAACGACGATGATGCAGTGAAGGGGCTACAGATTGCCCTCGAGGATAGGGTGGACACATTTAAGAAGAAGTTGAAGGAGAAAAGGGACCACATAGTGAAGTATAGTCTCAGCAGCTTTTCTCATGTGTTACAGGTACAGGCATACAAGACCCTATCAACTATAGAAGGCAAGGCTGCAAAGCGAATGAGGCCCGATGCGTTGCCCCGCATCCTTCGATGGTCATGCAAACAGTAA

Protein sequence

MEYRSSNVIFENDDDAVKGLQIALEDRVDTFKKKLKEKRDHIVKYSLSSFSHVLQVQAYKTLSTIEGKAAKRMRPDALPRILRWSCKQ
Homology
[Close]
BLAST of Lag0000672 vs. NCBI nr
Match: KGN49944.1 (hypothetical protein Csa_000148 [Cucumis sativus])

HSP 1 Score: 79.3 bits (194), Expect = 1.8e-11
Identity = 37/73 (50.68%), Postives = 54/73 (73.97%), Query Frame = 0 

Query: 14  DDAVKGLQIALEDRVDTFKKKLKEKRDHIVKYSLSSFSHVLQVQAYKTLSTIEGKAAKRM 73
           +  ++GLQ AL+++VD +KKK+K  +++ VKYSL  F H  QV AY+ +S+I GKA  R+
Sbjct: 199 EKTLRGLQNALKNKVDMYKKKVKLNKNYNVKYSLPGFPHAFQVWAYEIISSIAGKAVTRL 258

Query: 74  RPDALPRILRWSC 87
             +A+PRILRWSC
Sbjct: 259 NNEAVPRILRWSC 271

[Close]
BLAST of Lag0000672 vs. NCBI nr
Match: XP_031741885.1 (uncharacterized protein LOC105435430 isoform X2 [Cucumis sativus])

HSP 1 Score: 79.3 bits (194), Expect = 1.8e-11
Identity = 37/73 (50.68%), Postives = 54/73 (73.97%), Query Frame = 0 

Query: 14  DDAVKGLQIALEDRVDTFKKKLKEKRDHIVKYSLSSFSHVLQVQAYKTLSTIEGKAAKRM 73
           +  ++GLQ AL+++VD +KKK+K  +++ VKYSL  F H  QV AY+ +S+I GKA  R+
Sbjct: 282 EKTLRGLQNALKNKVDMYKKKVKLNKNYNVKYSLPGFPHAFQVWAYEIISSIAGKAVTRL 341

Query: 74  RPDALPRILRWSC 87
             +A+PRILRWSC
Sbjct: 342 NNEAVPRILRWSC 354

[Close]
BLAST of Lag0000672 vs. NCBI nr
Match: XP_011654656.1 (uncharacterized protein LOC105435430 isoform X1 [Cucumis sativus])

HSP 1 Score: 79.3 bits (194), Expect = 1.8e-11
Identity = 37/73 (50.68%), Postives = 54/73 (73.97%), Query Frame = 0 

Query: 14  DDAVKGLQIALEDRVDTFKKKLKEKRDHIVKYSLSSFSHVLQVQAYKTLSTIEGKAAKRM 73
           +  ++GLQ AL+++VD +KKK+K  +++ VKYSL  F H  QV AY+ +S+I GKA  R+
Sbjct: 282 EKTLRGLQNALKNKVDMYKKKVKLNKNYNVKYSLPGFPHAFQVWAYEIISSIAGKAVTRL 341

Query: 74  RPDALPRILRWSC 87
             +A+PRILRWSC
Sbjct: 342 NNEAVPRILRWSC 354

[Close]
BLAST of Lag0000672 vs. NCBI nr
Match: XP_008437500.1 (PREDICTED: uncharacterized protein LOC103482899 isoform X1 [Cucumis melo])

HSP 1 Score: 72.4 bits (176), Expect = 2.2e-09
Identity = 35/71 (49.30%), Postives = 52/71 (73.24%), Query Frame = 0 

Query: 17  VKGLQIALEDRVDTFKKKLKEKRDHIVKYSLSSFSHVLQVQAYKTLSTI-EGKAAKRMRP 76
           ++GLQ AL+++VD +KKK+K  +++ VKYSL  F H  QV AY+ +S++  G+A  R+  
Sbjct: 285 LRGLQNALKNKVDMYKKKVKLNKNYNVKYSLPGFPHAFQVWAYEIISSMAAGRAVTRLNN 344

Query: 77  DALPRILRWSC 87
           DA+PR LRWSC
Sbjct: 345 DAVPRFLRWSC 355

[Close]
BLAST of Lag0000672 vs. NCBI nr
Match: XP_008437501.1 (PREDICTED: uncharacterized protein LOC103482899 isoform X2 [Cucumis melo])

HSP 1 Score: 72.4 bits (176), Expect = 2.2e-09
Identity = 35/71 (49.30%), Postives = 52/71 (73.24%), Query Frame = 0 

Query: 17  VKGLQIALEDRVDTFKKKLKEKRDHIVKYSLSSFSHVLQVQAYKTLSTI-EGKAAKRMRP 76
           ++GLQ AL+++VD +KKK+K  +++ VKYSL  F H  QV AY+ +S++  G+A  R+  
Sbjct: 283 LRGLQNALKNKVDMYKKKVKLNKNYNVKYSLPGFPHAFQVWAYEIISSMAAGRAVTRLNN 342

Query: 77  DALPRILRWSC 87
           DA+PR LRWSC
Sbjct: 343 DAVPRFLRWSC 353

The following BLAST results are available for this feature:
BLAST of Lag0000672 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN49944.11.8e-1150.68hypothetical protein Csa_000148 [Cucumis sativus][more]
XP_031741885.11.8e-1150.68uncharacterized protein LOC105435430 isoform X2 [Cucumis sativus][more]
XP_011654656.11.8e-1150.68uncharacterized protein LOC105435430 isoform X1 [Cucumis sativus][more]
XP_008437500.12.2e-0949.30PREDICTED: uncharacterized protein LOC103482899 isoform X1 [Cucumis melo][more]
XP_008437501.12.2e-0949.30PREDICTED: uncharacterized protein LOC103482899 isoform X2 [Cucumis melo][more]
BLAST of Lag0000672 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0000672.1Lag0000672.1mRNA