Lag0000642 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGAAGATGGGATCACGAGCAGAGGAAGTGTGGGTTAAAGTTACCTATGAAAAGTTGCCTGAATTTTGTTACGACCGCGGGAAAGTTGGGCACGTGAAGCAAGAATGCGAGGAAAATGATCAACCAGATGTAGACCAACAATTTGAGGAATGGATGAGGGCCACCCCTATCTTAGGTGGGTCGAATAGAAACAAAACCCAAGACATTAGAATGGGACCATCATGGGGGAGAGGAAGAGGAAGGGGAACCGATTTCCAAAGATTCAGAGACGATTGGAGAGGTGGAAGAGGAAGCAAGGATACATGGAGAGGAAATGATCATCCAAAAGCTTCCAACCAAGCTGTCACCGGAGAAAGTCCGAAGAAAAGTCTCGAATCCCAAAACCAGGAGCTTCCAACGGCTAGTAAGGTGTCAGAGAAAAGTAAGGAATTAGCTGAAAAAACAGGACCACCGTCAGGAAAACAGGGTACGACAAGTCAAATAATCAAGAAAAGTAACTCAAGAGAGATGATGGAAGTCAGCAAAGATAAAGGAATAAATATTAATTCCTAG ATGGTGAAGATGGGATCACGAGCAGAGGAAGTGTGGGTTAAAGTTACCTATGAAAAGTTGCCTGAATTTTGTTACGACCGCGGGAAAGTTGGGCACGTGAAGCAAGAATGCGAGGAAAATGATCAACCAGATGTAGACCAACAATTTGAGGAATGGATGAGGGCCACCCCTATCTTAGGTGGGTCGAATAGAAACAAAACCCAAGACATTAGAATGGGACCATCATGGGGGAGAGGAAGAGGAAGGGGAACCGATTTCCAAAGATTCAGAGACGATTGGAGAGGTGGAAGAGGAAGCAAGGATACATGGAGAGGAAATGATCATCCAAAAGCTTCCAACCAAGCTGTCACCGGAGAAAGTCCGAAGAAAAGTCTCGAATCCCAAAACCAGGAGCTTCCAACGGCTAGTAAGGTGTCAGAGAAAAGTAAGGAATTAGCTGAAAAAACAGGACCACCGTCAGGAAAACAGGGTACGACAAGTCAAATAATCAAGAAAAGTAACTCAAGAGAGATGATGGAAGTCAGCAAAGATAAAGGAATAAATATTAATTCCTAG ATGGTGAAGATGGGATCACGAGCAGAGGAAGTGTGGGTTAAAGTTACCTATGAAAAGTTGCCTGAATTTTGTTACGACCGCGGGAAAGTTGGGCACGTGAAGCAAGAATGCGAGGAAAATGATCAACCAGATGTAGACCAACAATTTGAGGAATGGATGAGGGCCACCCCTATCTTAGGTGGGTCGAATAGAAACAAAACCCAAGACATTAGAATGGGACCATCATGGGGGAGAGGAAGAGGAAGGGGAACCGATTTCCAAAGATTCAGAGACGATTGGAGAGGTGGAAGAGGAAGCAAGGATACATGGAGAGGAAATGATCATCCAAAAGCTTCCAACCAAGCTGTCACCGGAGAAAGTCCGAAGAAAAGTCTCGAATCCCAAAACCAGGAGCTTCCAACGGCTAGTAAGGTGTCAGAGAAAAGTAAGGAATTAGCTGAAAAAACAGGACCACCGTCAGGAAAACAGGGTACGACAAGTCAAATAATCAAGAAAAGTAACTCAAGAGAGATGATGGAAGTCAGCAAAGATAAAGGAATAAATATTAATTCCTAG MVKMGSRAEEVWVKVTYEKLPEFCYDRGKVGHVKQECEENDQPDVDQQFEEWMRATPILGGSNRNKTQDIRMGPSWGRGRGRGTDFQRFRDDWRGGRGSKDTWRGNDHPKASNQAVTGESPKKSLESQNQELPTASKVSEKSKELAEKTGPPSGKQGTTSQIIKKSNSREMMEVSKDKGININS Homology
BLAST of Lag0000642 vs. NCBI nr
Match: KAA0046998.1 (reverse transcriptase [Cucumis melo var. makuwa] >TYK04784.1 reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 75.1 bits (183), Expect = 7.1e-10 Identity = 36/91 (39.56%), Postives = 56/91 (61.54%), Query Frame = 0
BLAST of Lag0000642 vs. NCBI nr
Match: XP_022149484.1 (uncharacterized protein LOC111017902 [Momordica charantia]) HSP 1 Score: 61.6 bits (148), Expect = 8.1e-06 Identity = 43/150 (28.67%), Postives = 78/150 (52.00%), Query Frame = 0
BLAST of Lag0000642 vs. NCBI nr
Match: PNX92709.1 (cysteine desulfurase mitochondrial-like [Trifolium pratense]) HSP 1 Score: 57.8 bits (138), Expect = 1.2e-04 Identity = 24/65 (36.92%), Postives = 38/65 (58.46%), Query Frame = 0
BLAST of Lag0000642 vs. NCBI nr
Match: GER41574.1 (cellular nucleic acid-binding protein [Striga asiatica]) HSP 1 Score: 56.6 bits (135), Expect = 2.6e-04 Identity = 26/66 (39.39%), Postives = 43/66 (65.15%), Query Frame = 0
BLAST of Lag0000642 vs. NCBI nr
Match: TXG48193.1 (hypothetical protein EZV62_027487 [Acer yangbiense]) HSP 1 Score: 56.2 bits (134), Expect = 3.4e-04 Identity = 44/134 (32.84%), Postives = 71/134 (52.99%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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