Lag0000581 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0000581
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr4: 10596812 .. 10598624 (-)
RNA-Seq ExpressionLag0000581
SyntenyLag0000581
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGATATCACTGTTCAACAAATTTCTTCAAAAGACAATTTGGCAGATCTATTTACGAAGGCATTACCTACTACGACCTTTGAGAAGTTGGTGCACAACATTGGAATGCGACGACTCAGAGATCTCAAATGATGTTTTCATGAGGGGGAGTAAATACACTGCACTCTTTTCCCCTTCGCTATGGTTTTTTTTTCCCACTGGGTTTTCCTAGCAAGGTTTTTAATGAGGTAGTTGTTAATGTATATAAATATAATGTACTCTTTTTCCTTCACTAGGGTTTTTTCCCATTGGGTTTTTCCCAGTAAGGTTTTAACGAGGCATATATTTCATATACAATGGATATCTAAGGGGGAGTGTTGTAAATATATATACCCGGTATATATAGGAATATATTAGATATCCATTAGTCTTAGTCAACCCATATTTGTAGGCATTCTTCCCCATGACTCTCCCACTCCCTTAGGAATAGCCAAGAGACTCTCACCCTCTTCTATTTTCAGCATTTTGAAGCTTGTAACCTACCCCATTGCATTAGTATAAATAGGGGTTGTATGAAGCATTGTAAACACACTTGAATGAAAAGCATTAGCTCTCTTTTCTCTCTACTTTGCTCTCTCAAATTCTCTCTTAAGTTGTTTTATTGCTTTCCACGTTTTATAACAAAGTTATCTTAATCGTATAAATGAATAAAGAATTTTTAAATTGAGAAATACAATAATAATCGTATCTAATTTTGAAAAGAAAGATGAAAAATTACATTAATGAACCGAAAAATGAATATGATTAAAAAAAATGAATACAAATATGCTGAAACATACCTCTGATCAATAAAAAGAAAACATACCTATGATCAACATACAATGTTGGAAGGAATAGTGAACTAACAAATCGAACAAACTTCTTGAAAAAGACGATGAATAAATCTGTAAAAATCTACTGGAAACTTGAATAAAAAACGTATATTTTGGGTAGACTATCAGATTGCAAAGTAAAAAAAAATATGGATTTGAATTTCAAATAGAAAGAGGGAGAGGATATGTAACGTCTGTAATTTAAGAAAATCCCAAATTTCATTAGTTTTGGAATAAATTGGAGTTGGAGGGAAATTGAAAAGATTTGAAAATTTTGGTGAATTTAAAAATTAGGGTTGAGTGGCATATTTGTAATTATGCTGAAAATTGAGCCAAGCCCAAGCCCATTAGGTCTTTTAAAAGACAACATGCAGCCCTAGGGAAGCTGAACTTCACCTTTCCTTCTTCTTCTCCACGTGAAATCAAGTAGCCAGCAGCCATTGTGTTTTTTTCTTCTTTTTGGCCGGCAGTCAAGACAGCAGCACCATCTCTGGCGGTCTTCGAGCGACGACTTCCTCTCCGACGGTCTTCTAGCGGCGACTTCCGACAGAGGAGCGGCGCGTACACGACGTTGCAGCGGCAAGCGAGGGGCAGTGCTCCTCGTGTTTTGGGTGTTGGCAGTGCAACATCTCACGACAACGACGTTGGTGTGCAACAGGTGCTCGCGGCGGCGTTTCTCGACTTCGGACGGCGGGTGCGACGGTACAACGTGTTTTCCGGCGAGGTAGTGTAGAGGACGCGTTTTTCTTCAAATTTCAATTCTTTTCGTTGGGTTTTAGCTAATTCCAGCAATGGGTAAGAGTTTTATGGTGGTTTTGAGGTTGTTTATAGGGTAAAATTAAATACCCATTGGTTTTGCCTTGTGATTTCAAGGCCATTAGCGTGTTGGTGATTCAATTGGAGGATCGGAGCAGATTTGAGACCCCGAACAACATGCGACGTTCTGTTTTGTGTGGTTAA

mRNA sequence

ATGGTGATATCACTGTTCAACAAATTTCTTCAAAAGACAATTTGGCAGATCTATTTACGAAGGCATTACCTACTACGACCTTTGAGAAGTTGGTGCACAACATTGGAATGCGACGACTCAGAGATCTCAAATGATGTTTTCATGAGGGGGATCAAGACAGCAGCACCATCTCTGGCGGTCTTCGAGCGACGACTTCCTCTCCGACGGTCTTCTAGCGGCGACTTCCGACAGAGGAGCGGCGCGTACACGACGTTGCAGCGGCAAGCGAGGGGCAGTGCTCCTCGTGTTTTGGGTGTTGGCAGTGCAACATCTCACGACAACGACGTTGGTGTGCAACAGGTGCTCGCGGCGGCGTTTCTCGACTTCGGACGGCGGGTGCGACGGTACAACGTGTTTTCCGGCGAGGGTAAAATTAAATACCCATTGGTTTTGCCTTGTGATTTCAAGGCCATTAGCGTGTTGGTGATTCAATTGGAGGATCGGAGCAGATTTGAGACCCCGAACAACATGCGACGTTCTGTTTTGTGTGGTTAA

Coding sequence (CDS)

ATGGTGATATCACTGTTCAACAAATTTCTTCAAAAGACAATTTGGCAGATCTATTTACGAAGGCATTACCTACTACGACCTTTGAGAAGTTGGTGCACAACATTGGAATGCGACGACTCAGAGATCTCAAATGATGTTTTCATGAGGGGGATCAAGACAGCAGCACCATCTCTGGCGGTCTTCGAGCGACGACTTCCTCTCCGACGGTCTTCTAGCGGCGACTTCCGACAGAGGAGCGGCGCGTACACGACGTTGCAGCGGCAAGCGAGGGGCAGTGCTCCTCGTGTTTTGGGTGTTGGCAGTGCAACATCTCACGACAACGACGTTGGTGTGCAACAGGTGCTCGCGGCGGCGTTTCTCGACTTCGGACGGCGGGTGCGACGGTACAACGTGTTTTCCGGCGAGGGTAAAATTAAATACCCATTGGTTTTGCCTTGTGATTTCAAGGCCATTAGCGTGTTGGTGATTCAATTGGAGGATCGGAGCAGATTTGAGACCCCGAACAACATGCGACGTTCTGTTTTGTGTGGTTAA

Protein sequence

MVISLFNKFLQKTIWQIYLRRHYLLRPLRSWCTTLECDDSEISNDVFMRGIKTAAPSLAVFERRLPLRRSSSGDFRQRSGAYTTLQRQARGSAPRVLGVGSATSHDNDVGVQQVLAAAFLDFGRRVRRYNVFSGEGKIKYPLVLPCDFKAISVLVIQLEDRSRFETPNNMRRSVLCG
Homology
[Close]
BLAST of Lag0000581 vs. NCBI nr
Match: WP_217833174.1 (hypothetical protein [Synechococcus sp. PCC 7002])

HSP 1 Score: 63.5 bits (153), Expect = 2.0e-06
Identity = 26/52 (50.00%), Postives = 37/52 (71.15%), Query Frame = 0 

Query: 1   MVISLFNKFLQKTIWQIYLRRHYLLRPLRSWCTTLECDDSEISNDVFMRGIK 53
           M  SL+NKF+++  WQ YL+ HY  +PL++WC TLEC DS IS+++   G K
Sbjct: 166 MATSLYNKFVRRITWQTYLQNHYQPQPLKNWCRTLECGDSNISSNIPTSGSK 217

The following BLAST results are available for this feature:
BLAST of Lag0000581 vs. NCBI nr
Match NameE-valueIdentityDescription
WP_217833174.12.0e-0650.00hypothetical protein [Synechococcus sp. PCC 7002][more]
BLAST of Lag0000581 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0000581.1Lag0000581.1mRNA