Lag0000572 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGGCAGTGGAGACCGAGGACGAGAAGATTCGGTCTGAGGTCGATCTCGGTCTTCTTCTCGTGACCTCCACTAGTGGCGGTCACCATCCGAATGCTCTGTGTTCATGTCTTGGTTTCTCTTCTCCATCCCCTTACTCATGGAATGACCGATATGCAGATTTGGCAAGCTTTCTTCCCCACAGACGGCGCCAACTGTTGATGGAAAAATCTGGCCAAGAGGAACTCACCCGTCTGTTACGTGCCACCAATGGTAAATTTGTAGATGAGGGGGAAGACGTGGCCTACAAAACGGTAAACCTGCACACCGGTGTGGTGCTAGCCACACCGCCTCCGATGCTTAAGTCAGAAAACAGAAGGAATAGCTAGAGAGTAAGGATAGAAGTCGAGAATAGGGTTCGGGATCCCTTCTTCAGTGACGAAGAGGGGTTTAAATACCTGCTTATACTCCTAGGGTTTTTAGGAATTCGGAGGCGTTTCCGGATGAACCAGGCGGAACTGGGGCGGCTAGAGGTCTTATCGAAAGATTTTCGAGTAAGTATTGAAGTTTATATATTTTCTATGGTATGTTTGGATGATTATTATTCTAATTGATTTGATTTGTGTAACTCATATATGATGTAGGAATTTAGCGACATGCAAAAGGAAAGATGTTTAAAACACAAGTATAACCATAGACTTGCCCATAAATGATATGCAAACATGGTAAAAGAGTTGGTATTTTTTTTTTTCTAATTTTATGAAGTTATGAAAGTTCATATAAAATTTTTGTTATTTCATGTTTATATTCTTATGTTTGAATAATTCAACTTTTGTAGAATAAAGAAGGAAAAATAACTGAAAATGTGGATCGATCCATTCTTTGGGTTCATGCTCGAAAAGGAAAAACTAGAAAATTCTTAAGTAAAGATATTGAGGATGTTGTTGCAAAAATCGTAAGTAACTGTATTTATTATTTACATTTTACTATGATATATTTTTCTTGAGAAATCATTTTCTTTTATCGTTTTCAAATTATAGGATGAACTATCAAAAGATGCCAAGTGTCAAAATGTTCGTTTAGATACATTTTGACACAAGTTTTGGATACTCCTGAACCCTCAGGACGTGTAAGAGGCATCGGTGGATTAATTGTACCTTCTTACTTCTTTCACAAGCTCATTCCATCAATTCCCAAGAATGTCGCAGTAGAGGATGAACCAGAAGGTTGGAAAAAAGAAAAGACACAACTTCAGAGACAATACAATGAAATGGAGAAGAAATTGCTTGAAATGCAATCTCAAATGGAGAGTGGTAGACTAACATCAATGTCAGATCGAGGTAGTTGCCAACAAGTACCAGACCCTCAGCCTTTTGATGAAAGACTTGACCAAGTAACAATATTAGAATTATATTGAAATGTATTTTATGACAATACTTGATACATAATAATAAATGAAAGTTCTAATATATAATTTTAATTTTAGGGGAGATCATGTAAACTTTTTGTTGAAGATGTAAAGAATATTGTGGCAGCAGGAATTGTATTTAAGAGGAAGGACGACCATCAAATTGTTTATGGGGTCCCGCTCATAGCAAACTATGTGCGAGTATTGGTTAAAGTTGTACATGACGCTGATGCTCAATTGCCCATACCTATAGTTGGAAGTATTGAGTCTGTATTCGACGCAGTAGGATCTCATGTTCCATGGCCTAAAGAACTCATAATTCTGGACAAAGAAAAAAGGTATGTTAAGCTAAGAAACACATAATATATTATTTTATATTATATATATATATATATATATATATATATATATATATATATATTTAATAAGGAATACTTTTTACGTAGGAACCTAAGAAAATGCATCGTGAATTAGCTGCAATAAAGGAAAAGAAGTCAAATAGTCAAGTGTCAAAAGTGCCGGTAGGAGTGAAATACATATTAGGATTTATAAAGAACATGACAAAGGATTGCTTAGTTATTACAGTACGCGACCACGTGGCTACCACTTCGACTTCCATCTAATGAAAAATAACATGAAAGAATTTTGCTTGATGGAGGAATTAGCAACCACTGTTATAACAATTTATATCGCGATATACTTTAACAAATTGTCATTAATTTTCTTATGTTTTTAATACTAATATGAATTTATTTTGCTTTTAGATACCTATGCGAGTCTGACCCATCCATCTTAGAGCAATATACATTTCTACATCCAGCATTGATCTTAATTGGCTCGGGACCTAAAGAGAACCGCTCTTGAGTCCTATGTTAAAGGTTAAGACAGGTCAATGACAAATTATTGATATGTCCTTTTAATCCCAGGTAAGTATGAAAACCAAGTATATGTTAACATTTTGCACCTTTGTTTTTGTTTTAACTCTATTGGATGATTGTTGCGTATATAGATATCATTGGGTGTTGTTGGTGATATCAATAAAAACATTAACAATATATTCAATTGACTCCCTGAGAGGCATGACTTTCGTGATGATGTAAAGAACATAATTAATACGTAAGTAAATAGTTATTTTAGCATATGTAAGTTTATTATTTATATTTTTTTTTAGTATTCTTATTATTATATTACTGTGTTAGGGCTACAAGAATGTTCTATTCTCAAACTAATATACGAAGTCCCCCTTCAAATGGGTATATGTTAAGGTAATGACTTTTACTAATTTTTTAGGTTTTTTTAATCATATTATACAAATTTTCTTATTACATGTGTTGAACTATATATGTAGTGTGCTCAACAATTGGGATCTACGGAGTGTGGATACTACACTCTTAAATTTATACGAGATATAGTATCTCATAGGAGCAGAGTGATTACAGATGTGGTACTAATTGATTTAGCCTTATATTCAACTTAACATTTTATATTTATTATATTTTTGTAAGGTAGTATGTTTGCTTCTTTTTTTTTTTTTTTTTTTTTGTAGTTGACGAGAGGAATTGCATTTAGCCAATCAGAATTCGATGAGATAAGAGCTAAATTATGTGAATATGTAGCACAATATATGGGATGATTGTTTGTTAATATTATACTTAGTTTTTTTATTCGTTTTTTAGACAACTTGTTAGACACTATGATATGTTCTTAGTTTGATGAAATTAATATTATGACTTACTTAATTTGTGTTCTTAGATAACCTTTTGGTTAATGAAATCTATTATCTCATTATGATTTCATGTTTGGTTGAAATTATGATTCATTTGATTCTCTATTTCTATATGAACAAGAATGTGTTTGTTACGAGATTTGACTCGTACTATTTATACTTGAGTTTTGATGTTACTTTCATATAATGTATTGAACATGTCATGTTATTGTCAAGTGAAGTGAAAGTTGTGTTCTAGGTTTAGAAGTGCATATTTTTGTTCTTTTATAGGTACCCAAAATTTTTTGGTTAGTTATAAGTACATCGTTATGTTGTCGGATTTTTGGTATGTTGTGTAAATGCAAGTTGCAAAGGAGGGGTAAAAACCAACGTGAGTTTTTTTTTTTAATTTTTTCCAAATATGTATCGTTGACTGTTAAAAAACGTCATAACAAACACCATAATTGACATATATTAACCGTCAATGAAAATACACAATTTGACAATTTAATACGGTAACTTGACGACTAATAAACGTCAATAAAATGATATATTGACAGCTCATAAACGTCAATAAAAATATATATTGACATTTTTGTAGTAGTGTACCCAGATAGTCTGCTTGCGAGGGTGCTTAGAGGAAGATATTTCAAGACGGGTCACTTTCTAAAAGCTGGAATTGGGCATAACCAATCTTATACGTGGAGGAGTATTGTATGGGGCCAAGATCTGTTTAAAAAGGGTTATAGATGGCAGATTGGGAGTGGGATAAATGTGAAGGCTGCAAATGATCCATGGATCCCTAGAAAAGGCTCTTGCAAGCCGATCCTTGCAAATAGAGAGGCGCAGCAATTAACAGTAGCCCAGCTCATGTCTTCGTGTGGGGCGTGGAAAGAGGACTTAGTTAGAAAATTGTTCTTGGAGGAAGGTGCCAATAACGTTTTACACATTCCTATCAATCCTCAAAACAAAATGGATGAGATCATTCTGAACCTGGACCCAAAAGGATACTTCACGGTTAAAAGTGCTTACCGCTTGGGTTCCCAAATTCAAAATATTACTGAAGCCTCGTCATCGGGATATAGATATAAGGAAGCTTTATGGAAAAATTTTTGGAAAACAAAAATTATGATGTATTAAGCAAGTATAACAGAGAGGAAGAAACTCACAATCACAAAGAACGACTGCAATTAGACTTGGGGCAAAATGATCTTCAGGCTAGGGCAAGGTGTTGGACGGACATGTCGATGGGCTCATGGATCCTGAACATTGATGCCTCGTGGTGTGAGAAAACGAAGAGTGGAGGTGTTGGATGGATCCTACGGCGCTGAGATGGTCTTCCAGTGTCGGTCGGATATCGCTTCATCTGCAGAAATTGGATGGTGGCTTGACTAGAAGCGCTGGCGGTGGCTGATGGATTGAAGGCGATTCCACAATCTTCCCCCAGGTTGATTATCGAGCTTGACTCTATTCAGGTGGTACATCTTCTTGCGGGAAAGGTGGAAGACGCCACAGAGTTGTCACTCTTCATCGAGGAAGCCAAGTCGTCCATGGAGGGTCTTTAG ATGAGGGCAGTGGAGACCGAGGACGAGAAGATTCGGTCTGAGGTCGATCTCGGTCTTCTTCTCGTGACCTCCACTAGTGGCGGTCACCATCCGAATGCTCTGTGTTCATGTCTTGGTTTCTCTTCTCCATCCCCTTACTCATGGAATGACCGATATGCAGATTTGGCAAGCTTTCTTCCCCACAGACGGCGCCAACTGTTGATGGAAAAATCTGGCCAAGAGGAACTCACCCGTCTGTTACGTGCCACCAATGGTAAATTTGTAGATGAGGGGGAAGACGTGGCCTACAAAACGGTAAACCTGCACACCGGTGTGGTGCTAGCCACACCGCCTCCGATGCTTAAGAATTCGGAGGCGTTTCCGGATGAACCAGGCGGAACTGGGGCGGCTAGAGGTCTTATCGAAAGATTTTCGAGACGTGTAAGAGGCATCGGTGGATTAATTGTACCTTCTTACTTCTTTCACAAGCTCATTCCATCAATTCCCAAGAATGTCGCAGTAGAGGATGAACCAGAAGGTTGGAAAAAAGAAAAGACACAACTTCAGAGACAATACAATGAAATGGAGAAGAAATTGCTTGAAATGCAATCTCAAATGGAGAGTGGTAGACTAACATCAATGTCAGATCGAGGTAGTTGCCAACAAGTACCAGACCCTCAGCCTTTTGATGAAAGACTTGACCAAGGGAGATCATGTAAACTTTTTGTTGAAGATGTAAAGAATATTGTGGCAGCAGGAATTGTATTTAAGAGGAAGGACGACCATCAAATTGTTTATGGGGTCCCGCTCATAGCAAACTATGTGCGAGTATTGGTTAAAGTTGTACATGACGCTGATGCTCAATTGCCCATACCTATAGTTGGAAGTATTGAGTCTGTATTCGACGCAGTAGGATCTCATGTTCCATGGCCTAAAGAACTCATAATTCTGGACAAAGAAAAAAGTCTGCTTGCGAGGGTGCTTAGAGGAAGATATTTCAAGACGGGTCACTTTCTAAAAGCTGGAATTGGGCATAACCAATCTTATACGTGGAGGAGTATTGTATGGGGCCAAGATCTGTTTAAAAAGGGTTATAGATGGCAGATTGGGAGTGGGATAAATGTGAAGGCTGCAAATGATCCATGGATCCCTAGAAAAGGCTCTTGCAAGCCGATCCTTGCAAATAGAGAGGCGCAGCAATTAACAGTAGCCCAGCTCATGTCTTCGTGTGGGGCGTGGAAAGAGGACTTAGTTAGAAAATTGTTCTTGGAGGAAGGTGCCAATAACGTTTTACACATTCCTATCAATCCTCAAAACAAAATGGATGAGATCATTCTGAACCTGGACCCAAAAGGATACTTCACGGCTAGGGCAAGGTGTTGGACGGACATGTCGATGGGCTCATGGATCCTGAACATTGATGCCTCGTGGTGTGAGAAAACGAAGAGTGGAGAAGCGCTGGCGGTGGCTGATGGATTGAAGGCGATTCCACAATCTTCCCCCAGGTTGATTATCGAGCTTGACTCTATTCAGGTGGTACATCTTCTTGCGGGAAAGGTGGAAGACGCCACAGAGTTGTCACTCTTCATCGAGGAAGCCAAGTCGTCCATGGAGGGTCTTTAG ATGAGGGCAGTGGAGACCGAGGACGAGAAGATTCGGTCTGAGGTCGATCTCGGTCTTCTTCTCGTGACCTCCACTAGTGGCGGTCACCATCCGAATGCTCTGTGTTCATGTCTTGGTTTCTCTTCTCCATCCCCTTACTCATGGAATGACCGATATGCAGATTTGGCAAGCTTTCTTCCCCACAGACGGCGCCAACTGTTGATGGAAAAATCTGGCCAAGAGGAACTCACCCGTCTGTTACGTGCCACCAATGGTAAATTTGTAGATGAGGGGGAAGACGTGGCCTACAAAACGGTAAACCTGCACACCGGTGTGGTGCTAGCCACACCGCCTCCGATGCTTAAGAATTCGGAGGCGTTTCCGGATGAACCAGGCGGAACTGGGGCGGCTAGAGGTCTTATCGAAAGATTTTCGAGACGTGTAAGAGGCATCGGTGGATTAATTGTACCTTCTTACTTCTTTCACAAGCTCATTCCATCAATTCCCAAGAATGTCGCAGTAGAGGATGAACCAGAAGGTTGGAAAAAAGAAAAGACACAACTTCAGAGACAATACAATGAAATGGAGAAGAAATTGCTTGAAATGCAATCTCAAATGGAGAGTGGTAGACTAACATCAATGTCAGATCGAGGTAGTTGCCAACAAGTACCAGACCCTCAGCCTTTTGATGAAAGACTTGACCAAGGGAGATCATGTAAACTTTTTGTTGAAGATGTAAAGAATATTGTGGCAGCAGGAATTGTATTTAAGAGGAAGGACGACCATCAAATTGTTTATGGGGTCCCGCTCATAGCAAACTATGTGCGAGTATTGGTTAAAGTTGTACATGACGCTGATGCTCAATTGCCCATACCTATAGTTGGAAGTATTGAGTCTGTATTCGACGCAGTAGGATCTCATGTTCCATGGCCTAAAGAACTCATAATTCTGGACAAAGAAAAAAGTCTGCTTGCGAGGGTGCTTAGAGGAAGATATTTCAAGACGGGTCACTTTCTAAAAGCTGGAATTGGGCATAACCAATCTTATACGTGGAGGAGTATTGTATGGGGCCAAGATCTGTTTAAAAAGGGTTATAGATGGCAGATTGGGAGTGGGATAAATGTGAAGGCTGCAAATGATCCATGGATCCCTAGAAAAGGCTCTTGCAAGCCGATCCTTGCAAATAGAGAGGCGCAGCAATTAACAGTAGCCCAGCTCATGTCTTCGTGTGGGGCGTGGAAAGAGGACTTAGTTAGAAAATTGTTCTTGGAGGAAGGTGCCAATAACGTTTTACACATTCCTATCAATCCTCAAAACAAAATGGATGAGATCATTCTGAACCTGGACCCAAAAGGATACTTCACGGCTAGGGCAAGGTGTTGGACGGACATGTCGATGGGCTCATGGATCCTGAACATTGATGCCTCGTGGTGTGAGAAAACGAAGAGTGGAGAAGCGCTGGCGGTGGCTGATGGATTGAAGGCGATTCCACAATCTTCCCCCAGGTTGATTATCGAGCTTGACTCTATTCAGGTGGTACATCTTCTTGCGGGAAAGGTGGAAGACGCCACAGAGTTGTCACTCTTCATCGAGGAAGCCAAGTCGTCCATGGAGGGTCTTTAG MRAVETEDEKIRSEVDLGLLLVTSTSGGHHPNALCSCLGFSSPSPYSWNDRYADLASFLPHRRRQLLMEKSGQEELTRLLRATNGKFVDEGEDVAYKTVNLHTGVVLATPPPMLKNSEAFPDEPGGTGAARGLIERFSRRVRGIGGLIVPSYFFHKLIPSIPKNVAVEDEPEGWKKEKTQLQRQYNEMEKKLLEMQSQMESGRLTSMSDRGSCQQVPDPQPFDERLDQGRSCKLFVEDVKNIVAAGIVFKRKDDHQIVYGVPLIANYVRVLVKVVHDADAQLPIPIVGSIESVFDAVGSHVPWPKELIILDKEKSLLARVLRGRYFKTGHFLKAGIGHNQSYTWRSIVWGQDLFKKGYRWQIGSGINVKAANDPWIPRKGSCKPILANREAQQLTVAQLMSSCGAWKEDLVRKLFLEEGANNVLHIPINPQNKMDEIILNLDPKGYFTARARCWTDMSMGSWILNIDASWCEKTKSGEALAVADGLKAIPQSSPRLIIELDSIQVVHLLAGKVEDATELSLFIEEAKSSMEGL Homology
BLAST of Lag0000572 vs. NCBI nr
Match: XP_022155286.1 (uncharacterized protein LOC111022423 [Momordica charantia]) HSP 1 Score: 151.8 bits (382), Expect = 1.7e-32 Identity = 67/143 (46.85%), Postives = 95/143 (66.43%), Query Frame = 0
BLAST of Lag0000572 vs. NCBI nr
Match: TYK11863.1 (uncharacterized protein E5676_scaffold177G00110 [Cucumis melo var. makuwa]) HSP 1 Score: 147.1 bits (370), Expect = 4.2e-31 Identity = 87/205 (42.44%), Postives = 125/205 (60.98%), Query Frame = 0
BLAST of Lag0000572 vs. NCBI nr
Match: KAA0040896.1 (transposase [Cucumis melo var. makuwa]) HSP 1 Score: 146.7 bits (369), Expect = 5.5e-31 Identity = 81/184 (44.02%), Postives = 116/184 (63.04%), Query Frame = 0
BLAST of Lag0000572 vs. NCBI nr
Match: KAA0053273.1 (putative transposase [Cucumis melo var. makuwa]) HSP 1 Score: 139.0 bits (349), Expect = 1.2e-28 Identity = 79/176 (44.89%), Postives = 111/176 (63.07%), Query Frame = 0
BLAST of Lag0000572 vs. NCBI nr
Match: XP_024037590.1 (uncharacterized protein LOC112097210 [Citrus clementina]) HSP 1 Score: 129.8 bits (325), Expect = 7.0e-26 Identity = 60/143 (41.96%), Postives = 88/143 (61.54%), Query Frame = 0
BLAST of Lag0000572 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 3.1e-08 Identity = 28/77 (36.36%), Postives = 43/77 (55.84%), Query Frame = 0
BLAST of Lag0000572 vs. ExPASy TrEMBL
Match: A0A6J1DRA0 (uncharacterized protein LOC111022423 OS=Momordica charantia OX=3673 GN=LOC111022423 PE=4 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 8.3e-33 Identity = 67/143 (46.85%), Postives = 95/143 (66.43%), Query Frame = 0
BLAST of Lag0000572 vs. ExPASy TrEMBL
Match: A0A5D3CIW3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G00110 PE=4 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 2.1e-31 Identity = 87/205 (42.44%), Postives = 125/205 (60.98%), Query Frame = 0
BLAST of Lag0000572 vs. ExPASy TrEMBL
Match: A0A5A7TFT2 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold125G00050 PE=4 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 2.7e-31 Identity = 81/184 (44.02%), Postives = 116/184 (63.04%), Query Frame = 0
BLAST of Lag0000572 vs. ExPASy TrEMBL
Match: A0A5A7UBK9 (Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00720 PE=4 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 5.6e-29 Identity = 79/176 (44.89%), Postives = 111/176 (63.07%), Query Frame = 0
BLAST of Lag0000572 vs. ExPASy TrEMBL
Match: A0A803PJK4 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 1.9e-24 Identity = 56/143 (39.16%), Postives = 87/143 (60.84%), Query Frame = 0
BLAST of Lag0000572 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 64.7 bits (156), Expect = 2.6e-10 Identity = 37/155 (23.87%), Postives = 71/155 (45.81%), Query Frame = 0
BLAST of Lag0000572 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 64.3 bits (155), Expect = 3.4e-10 Identity = 44/153 (28.76%), Postives = 72/153 (47.06%), Query Frame = 0
BLAST of Lag0000572 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein ) HSP 1 Score: 61.6 bits (148), Expect = 2.2e-09 Identity = 28/77 (36.36%), Postives = 43/77 (55.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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