Lag0000572 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0000572
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRibonuclease H-like superfamily protein
Locationchr4: 10299344 .. 10304001 (+)
RNA-Seq ExpressionLag0000572
SyntenyLag0000572
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGGCAGTGGAGACCGAGGACGAGAAGATTCGGTCTGAGGTCGATCTCGGTCTTCTTCTCGTGACCTCCACTAGTGGCGGTCACCATCCGAATGCTCTGTGTTCATGTCTTGGTTTCTCTTCTCCATCCCCTTACTCATGGAATGACCGATATGCAGATTTGGCAAGCTTTCTTCCCCACAGACGGCGCCAACTGTTGATGGAAAAATCTGGCCAAGAGGAACTCACCCGTCTGTTACGTGCCACCAATGGTAAATTTGTAGATGAGGGGGAAGACGTGGCCTACAAAACGGTAAACCTGCACACCGGTGTGGTGCTAGCCACACCGCCTCCGATGCTTAAGTCAGAAAACAGAAGGAATAGCTAGAGAGTAAGGATAGAAGTCGAGAATAGGGTTCGGGATCCCTTCTTCAGTGACGAAGAGGGGTTTAAATACCTGCTTATACTCCTAGGGTTTTTAGGAATTCGGAGGCGTTTCCGGATGAACCAGGCGGAACTGGGGCGGCTAGAGGTCTTATCGAAAGATTTTCGAGTAAGTATTGAAGTTTATATATTTTCTATGGTATGTTTGGATGATTATTATTCTAATTGATTTGATTTGTGTAACTCATATATGATGTAGGAATTTAGCGACATGCAAAAGGAAAGATGTTTAAAACACAAGTATAACCATAGACTTGCCCATAAATGATATGCAAACATGGTAAAAGAGTTGGTATTTTTTTTTTTCTAATTTTATGAAGTTATGAAAGTTCATATAAAATTTTTGTTATTTCATGTTTATATTCTTATGTTTGAATAATTCAACTTTTGTAGAATAAAGAAGGAAAAATAACTGAAAATGTGGATCGATCCATTCTTTGGGTTCATGCTCGAAAAGGAAAAACTAGAAAATTCTTAAGTAAAGATATTGAGGATGTTGTTGCAAAAATCGTAAGTAACTGTATTTATTATTTACATTTTACTATGATATATTTTTCTTGAGAAATCATTTTCTTTTATCGTTTTCAAATTATAGGATGAACTATCAAAAGATGCCAAGTGTCAAAATGTTCGTTTAGATACATTTTGACACAAGTTTTGGATACTCCTGAACCCTCAGGACGTGTAAGAGGCATCGGTGGATTAATTGTACCTTCTTACTTCTTTCACAAGCTCATTCCATCAATTCCCAAGAATGTCGCAGTAGAGGATGAACCAGAAGGTTGGAAAAAAGAAAAGACACAACTTCAGAGACAATACAATGAAATGGAGAAGAAATTGCTTGAAATGCAATCTCAAATGGAGAGTGGTAGACTAACATCAATGTCAGATCGAGGTAGTTGCCAACAAGTACCAGACCCTCAGCCTTTTGATGAAAGACTTGACCAAGTAACAATATTAGAATTATATTGAAATGTATTTTATGACAATACTTGATACATAATAATAAATGAAAGTTCTAATATATAATTTTAATTTTAGGGGAGATCATGTAAACTTTTTGTTGAAGATGTAAAGAATATTGTGGCAGCAGGAATTGTATTTAAGAGGAAGGACGACCATCAAATTGTTTATGGGGTCCCGCTCATAGCAAACTATGTGCGAGTATTGGTTAAAGTTGTACATGACGCTGATGCTCAATTGCCCATACCTATAGTTGGAAGTATTGAGTCTGTATTCGACGCAGTAGGATCTCATGTTCCATGGCCTAAAGAACTCATAATTCTGGACAAAGAAAAAAGGTATGTTAAGCTAAGAAACACATAATATATTATTTTATATTATATATATATATATATATATATATATATATATATATATATATTTAATAAGGAATACTTTTTACGTAGGAACCTAAGAAAATGCATCGTGAATTAGCTGCAATAAAGGAAAAGAAGTCAAATAGTCAAGTGTCAAAAGTGCCGGTAGGAGTGAAATACATATTAGGATTTATAAAGAACATGACAAAGGATTGCTTAGTTATTACAGTACGCGACCACGTGGCTACCACTTCGACTTCCATCTAATGAAAAATAACATGAAAGAATTTTGCTTGATGGAGGAATTAGCAACCACTGTTATAACAATTTATATCGCGATATACTTTAACAAATTGTCATTAATTTTCTTATGTTTTTAATACTAATATGAATTTATTTTGCTTTTAGATACCTATGCGAGTCTGACCCATCCATCTTAGAGCAATATACATTTCTACATCCAGCATTGATCTTAATTGGCTCGGGACCTAAAGAGAACCGCTCTTGAGTCCTATGTTAAAGGTTAAGACAGGTCAATGACAAATTATTGATATGTCCTTTTAATCCCAGGTAAGTATGAAAACCAAGTATATGTTAACATTTTGCACCTTTGTTTTTGTTTTAACTCTATTGGATGATTGTTGCGTATATAGATATCATTGGGTGTTGTTGGTGATATCAATAAAAACATTAACAATATATTCAATTGACTCCCTGAGAGGCATGACTTTCGTGATGATGTAAAGAACATAATTAATACGTAAGTAAATAGTTATTTTAGCATATGTAAGTTTATTATTTATATTTTTTTTTAGTATTCTTATTATTATATTACTGTGTTAGGGCTACAAGAATGTTCTATTCTCAAACTAATATACGAAGTCCCCCTTCAAATGGGTATATGTTAAGGTAATGACTTTTACTAATTTTTTAGGTTTTTTTAATCATATTATACAAATTTTCTTATTACATGTGTTGAACTATATATGTAGTGTGCTCAACAATTGGGATCTACGGAGTGTGGATACTACACTCTTAAATTTATACGAGATATAGTATCTCATAGGAGCAGAGTGATTACAGATGTGGTACTAATTGATTTAGCCTTATATTCAACTTAACATTTTATATTTATTATATTTTTGTAAGGTAGTATGTTTGCTTCTTTTTTTTTTTTTTTTTTTTTGTAGTTGACGAGAGGAATTGCATTTAGCCAATCAGAATTCGATGAGATAAGAGCTAAATTATGTGAATATGTAGCACAATATATGGGATGATTGTTTGTTAATATTATACTTAGTTTTTTTATTCGTTTTTTAGACAACTTGTTAGACACTATGATATGTTCTTAGTTTGATGAAATTAATATTATGACTTACTTAATTTGTGTTCTTAGATAACCTTTTGGTTAATGAAATCTATTATCTCATTATGATTTCATGTTTGGTTGAAATTATGATTCATTTGATTCTCTATTTCTATATGAACAAGAATGTGTTTGTTACGAGATTTGACTCGTACTATTTATACTTGAGTTTTGATGTTACTTTCATATAATGTATTGAACATGTCATGTTATTGTCAAGTGAAGTGAAAGTTGTGTTCTAGGTTTAGAAGTGCATATTTTTGTTCTTTTATAGGTACCCAAAATTTTTTGGTTAGTTATAAGTACATCGTTATGTTGTCGGATTTTTGGTATGTTGTGTAAATGCAAGTTGCAAAGGAGGGGTAAAAACCAACGTGAGTTTTTTTTTTTAATTTTTTCCAAATATGTATCGTTGACTGTTAAAAAACGTCATAACAAACACCATAATTGACATATATTAACCGTCAATGAAAATACACAATTTGACAATTTAATACGGTAACTTGACGACTAATAAACGTCAATAAAATGATATATTGACAGCTCATAAACGTCAATAAAAATATATATTGACATTTTTGTAGTAGTGTACCCAGATAGTCTGCTTGCGAGGGTGCTTAGAGGAAGATATTTCAAGACGGGTCACTTTCTAAAAGCTGGAATTGGGCATAACCAATCTTATACGTGGAGGAGTATTGTATGGGGCCAAGATCTGTTTAAAAAGGGTTATAGATGGCAGATTGGGAGTGGGATAAATGTGAAGGCTGCAAATGATCCATGGATCCCTAGAAAAGGCTCTTGCAAGCCGATCCTTGCAAATAGAGAGGCGCAGCAATTAACAGTAGCCCAGCTCATGTCTTCGTGTGGGGCGTGGAAAGAGGACTTAGTTAGAAAATTGTTCTTGGAGGAAGGTGCCAATAACGTTTTACACATTCCTATCAATCCTCAAAACAAAATGGATGAGATCATTCTGAACCTGGACCCAAAAGGATACTTCACGGTTAAAAGTGCTTACCGCTTGGGTTCCCAAATTCAAAATATTACTGAAGCCTCGTCATCGGGATATAGATATAAGGAAGCTTTATGGAAAAATTTTTGGAAAACAAAAATTATGATGTATTAAGCAAGTATAACAGAGAGGAAGAAACTCACAATCACAAAGAACGACTGCAATTAGACTTGGGGCAAAATGATCTTCAGGCTAGGGCAAGGTGTTGGACGGACATGTCGATGGGCTCATGGATCCTGAACATTGATGCCTCGTGGTGTGAGAAAACGAAGAGTGGAGGTGTTGGATGGATCCTACGGCGCTGAGATGGTCTTCCAGTGTCGGTCGGATATCGCTTCATCTGCAGAAATTGGATGGTGGCTTGACTAGAAGCGCTGGCGGTGGCTGATGGATTGAAGGCGATTCCACAATCTTCCCCCAGGTTGATTATCGAGCTTGACTCTATTCAGGTGGTACATCTTCTTGCGGGAAAGGTGGAAGACGCCACAGAGTTGTCACTCTTCATCGAGGAAGCCAAGTCGTCCATGGAGGGTCTTTAG

mRNA sequence

ATGAGGGCAGTGGAGACCGAGGACGAGAAGATTCGGTCTGAGGTCGATCTCGGTCTTCTTCTCGTGACCTCCACTAGTGGCGGTCACCATCCGAATGCTCTGTGTTCATGTCTTGGTTTCTCTTCTCCATCCCCTTACTCATGGAATGACCGATATGCAGATTTGGCAAGCTTTCTTCCCCACAGACGGCGCCAACTGTTGATGGAAAAATCTGGCCAAGAGGAACTCACCCGTCTGTTACGTGCCACCAATGGTAAATTTGTAGATGAGGGGGAAGACGTGGCCTACAAAACGGTAAACCTGCACACCGGTGTGGTGCTAGCCACACCGCCTCCGATGCTTAAGAATTCGGAGGCGTTTCCGGATGAACCAGGCGGAACTGGGGCGGCTAGAGGTCTTATCGAAAGATTTTCGAGACGTGTAAGAGGCATCGGTGGATTAATTGTACCTTCTTACTTCTTTCACAAGCTCATTCCATCAATTCCCAAGAATGTCGCAGTAGAGGATGAACCAGAAGGTTGGAAAAAAGAAAAGACACAACTTCAGAGACAATACAATGAAATGGAGAAGAAATTGCTTGAAATGCAATCTCAAATGGAGAGTGGTAGACTAACATCAATGTCAGATCGAGGTAGTTGCCAACAAGTACCAGACCCTCAGCCTTTTGATGAAAGACTTGACCAAGGGAGATCATGTAAACTTTTTGTTGAAGATGTAAAGAATATTGTGGCAGCAGGAATTGTATTTAAGAGGAAGGACGACCATCAAATTGTTTATGGGGTCCCGCTCATAGCAAACTATGTGCGAGTATTGGTTAAAGTTGTACATGACGCTGATGCTCAATTGCCCATACCTATAGTTGGAAGTATTGAGTCTGTATTCGACGCAGTAGGATCTCATGTTCCATGGCCTAAAGAACTCATAATTCTGGACAAAGAAAAAAGTCTGCTTGCGAGGGTGCTTAGAGGAAGATATTTCAAGACGGGTCACTTTCTAAAAGCTGGAATTGGGCATAACCAATCTTATACGTGGAGGAGTATTGTATGGGGCCAAGATCTGTTTAAAAAGGGTTATAGATGGCAGATTGGGAGTGGGATAAATGTGAAGGCTGCAAATGATCCATGGATCCCTAGAAAAGGCTCTTGCAAGCCGATCCTTGCAAATAGAGAGGCGCAGCAATTAACAGTAGCCCAGCTCATGTCTTCGTGTGGGGCGTGGAAAGAGGACTTAGTTAGAAAATTGTTCTTGGAGGAAGGTGCCAATAACGTTTTACACATTCCTATCAATCCTCAAAACAAAATGGATGAGATCATTCTGAACCTGGACCCAAAAGGATACTTCACGGCTAGGGCAAGGTGTTGGACGGACATGTCGATGGGCTCATGGATCCTGAACATTGATGCCTCGTGGTGTGAGAAAACGAAGAGTGGAGAAGCGCTGGCGGTGGCTGATGGATTGAAGGCGATTCCACAATCTTCCCCCAGGTTGATTATCGAGCTTGACTCTATTCAGGTGGTACATCTTCTTGCGGGAAAGGTGGAAGACGCCACAGAGTTGTCACTCTTCATCGAGGAAGCCAAGTCGTCCATGGAGGGTCTTTAG

Coding sequence (CDS)

ATGAGGGCAGTGGAGACCGAGGACGAGAAGATTCGGTCTGAGGTCGATCTCGGTCTTCTTCTCGTGACCTCCACTAGTGGCGGTCACCATCCGAATGCTCTGTGTTCATGTCTTGGTTTCTCTTCTCCATCCCCTTACTCATGGAATGACCGATATGCAGATTTGGCAAGCTTTCTTCCCCACAGACGGCGCCAACTGTTGATGGAAAAATCTGGCCAAGAGGAACTCACCCGTCTGTTACGTGCCACCAATGGTAAATTTGTAGATGAGGGGGAAGACGTGGCCTACAAAACGGTAAACCTGCACACCGGTGTGGTGCTAGCCACACCGCCTCCGATGCTTAAGAATTCGGAGGCGTTTCCGGATGAACCAGGCGGAACTGGGGCGGCTAGAGGTCTTATCGAAAGATTTTCGAGACGTGTAAGAGGCATCGGTGGATTAATTGTACCTTCTTACTTCTTTCACAAGCTCATTCCATCAATTCCCAAGAATGTCGCAGTAGAGGATGAACCAGAAGGTTGGAAAAAAGAAAAGACACAACTTCAGAGACAATACAATGAAATGGAGAAGAAATTGCTTGAAATGCAATCTCAAATGGAGAGTGGTAGACTAACATCAATGTCAGATCGAGGTAGTTGCCAACAAGTACCAGACCCTCAGCCTTTTGATGAAAGACTTGACCAAGGGAGATCATGTAAACTTTTTGTTGAAGATGTAAAGAATATTGTGGCAGCAGGAATTGTATTTAAGAGGAAGGACGACCATCAAATTGTTTATGGGGTCCCGCTCATAGCAAACTATGTGCGAGTATTGGTTAAAGTTGTACATGACGCTGATGCTCAATTGCCCATACCTATAGTTGGAAGTATTGAGTCTGTATTCGACGCAGTAGGATCTCATGTTCCATGGCCTAAAGAACTCATAATTCTGGACAAAGAAAAAAGTCTGCTTGCGAGGGTGCTTAGAGGAAGATATTTCAAGACGGGTCACTTTCTAAAAGCTGGAATTGGGCATAACCAATCTTATACGTGGAGGAGTATTGTATGGGGCCAAGATCTGTTTAAAAAGGGTTATAGATGGCAGATTGGGAGTGGGATAAATGTGAAGGCTGCAAATGATCCATGGATCCCTAGAAAAGGCTCTTGCAAGCCGATCCTTGCAAATAGAGAGGCGCAGCAATTAACAGTAGCCCAGCTCATGTCTTCGTGTGGGGCGTGGAAAGAGGACTTAGTTAGAAAATTGTTCTTGGAGGAAGGTGCCAATAACGTTTTACACATTCCTATCAATCCTCAAAACAAAATGGATGAGATCATTCTGAACCTGGACCCAAAAGGATACTTCACGGCTAGGGCAAGGTGTTGGACGGACATGTCGATGGGCTCATGGATCCTGAACATTGATGCCTCGTGGTGTGAGAAAACGAAGAGTGGAGAAGCGCTGGCGGTGGCTGATGGATTGAAGGCGATTCCACAATCTTCCCCCAGGTTGATTATCGAGCTTGACTCTATTCAGGTGGTACATCTTCTTGCGGGAAAGGTGGAAGACGCCACAGAGTTGTCACTCTTCATCGAGGAAGCCAAGTCGTCCATGGAGGGTCTTTAG

Protein sequence

MRAVETEDEKIRSEVDLGLLLVTSTSGGHHPNALCSCLGFSSPSPYSWNDRYADLASFLPHRRRQLLMEKSGQEELTRLLRATNGKFVDEGEDVAYKTVNLHTGVVLATPPPMLKNSEAFPDEPGGTGAARGLIERFSRRVRGIGGLIVPSYFFHKLIPSIPKNVAVEDEPEGWKKEKTQLQRQYNEMEKKLLEMQSQMESGRLTSMSDRGSCQQVPDPQPFDERLDQGRSCKLFVEDVKNIVAAGIVFKRKDDHQIVYGVPLIANYVRVLVKVVHDADAQLPIPIVGSIESVFDAVGSHVPWPKELIILDKEKSLLARVLRGRYFKTGHFLKAGIGHNQSYTWRSIVWGQDLFKKGYRWQIGSGINVKAANDPWIPRKGSCKPILANREAQQLTVAQLMSSCGAWKEDLVRKLFLEEGANNVLHIPINPQNKMDEIILNLDPKGYFTARARCWTDMSMGSWILNIDASWCEKTKSGEALAVADGLKAIPQSSPRLIIELDSIQVVHLLAGKVEDATELSLFIEEAKSSMEGL
Homology
BLAST of Lag0000572 vs. NCBI nr
Match: XP_022155286.1 (uncharacterized protein LOC111022423 [Momordica charantia])

HSP 1 Score: 151.8 bits (382), Expect = 1.7e-32
Identity = 67/143 (46.85%), Postives = 95/143 (66.43%), Query Frame = 0

Query: 309 ILDKEKSLLARVLRGRYFKTGHFLKAGIGHNQSYTWRSIVWGQDLFKKGYRWQIGSGINV 368
           IL    SLLA+ LRG+YFKTG FL+A +G   SY WRSI+WG+DLFKKGYRW++G+G ++
Sbjct: 538 ILRHPDSLLAKTLRGKYFKTGSFLQAKLGARPSYAWRSILWGRDLFKKGYRWKVGNGFSI 597

Query: 369 KAANDPWIPRKGSCKPILANREAQQLTVAQLMSSCGAWKEDLVRKLFLEEGANNVLHIPI 428
             ++DPW+PR G+  P+  +   +  +VA LM   G W E  VR+ F+   A+ +L  P+
Sbjct: 598 NLSSDPWLPRDGNFSPVFTHIHVRNFSVAWLMEGRGRWDEIKVRESFIVSEADIILQTPL 657

Query: 429 NPQNKMDEIILNLDPKGYFTARA 452
             Q+K DEII  +D  G F+ R+
Sbjct: 658 PSQDKDDEIIWGMDKTGIFSVRS 680

BLAST of Lag0000572 vs. NCBI nr
Match: TYK11863.1 (uncharacterized protein E5676_scaffold177G00110 [Cucumis melo var. makuwa])

HSP 1 Score: 147.1 bits (370), Expect = 4.2e-31
Identity = 87/205 (42.44%), Postives = 125/205 (60.98%), Query Frame = 0

Query: 126 GTGAARGLIERFSRRVRGIGGLIVPSYFFHKLIPSIPKNV-AVEDEPEGWKKEKTQLQRQ 185
           GT   RG       RVRG+GGLI  S++FHK IPS P+      D    WKKEK+Q+  +
Sbjct: 165 GTSEHRG-------RVRGVGGLITSSFYFHKHIPSQPRETHTTVDVDANWKKEKSQILSE 224

Query: 186 YNEMEKKLLEMQSQMESGRLTSMSDRGSCQQVPDPQPF-------DERLDQGRSCKLFVE 245
           Y++M KK+L+++S ++  R TS+     C Q    + F        ++++ GR C L V 
Sbjct: 225 YSQMAKKMLKLKS-LKRTRETSLDAHSGCNQNISEKQFISTSIHHTKKINLGRPCSLAVG 284

Query: 246 DVKNIVAAGIVFKRKDDHQIVYGVPLIANYVRVLVKVVHDADAQLPIPIVGSIESVFDAV 305
            V NIVA G VF+R    +IVYGV L    VRVL+++  D+ + LPIPIV SI S+ DA+
Sbjct: 285 KVDNIVATGTVFERISTGEIVYGVRLGEGDVRVLIELACDSHSLLPIPIVESIYSIHDAI 344

Query: 306 GSHVPWPKELIILDKEKSLLARVLR 323
           GSHVPWPK LI+++++K+  ++  R
Sbjct: 345 GSHVPWPKYLIVIEEQKNTSSKKSR 361

BLAST of Lag0000572 vs. NCBI nr
Match: KAA0040896.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 146.7 bits (369), Expect = 5.5e-31
Identity = 81/184 (44.02%), Postives = 116/184 (63.04%), Query Frame = 0

Query: 140 RVRGIGGLIVPSYFFHKLIPSIPKNVAVE-DEPEGWKKEKTQLQRQYNEMEKKLLEMQSQ 199
           RVRG+GGLI P ++F+K IPS P+   +  D    WKKEK+Q+  +Y++M K+ L+    
Sbjct: 616 RVRGVGGLITPLFYFYKHIPSEPRETHITVDVDANWKKEKSQILSEYSQMAKQTLK---S 675

Query: 200 MESGRLTSMSDRGSCQQVPDPQPF-------DERLDQGRSCKLFVEDVKNIVAAGIVFKR 259
           ++  R TS+     C Q    + F        E++D GR C L V  V NIV+ G VF+R
Sbjct: 676 LKRNRETSLDAHSGCNQNISEKQFISMSNHHTEKIDLGRPCSLAVGKVDNIVSTGTVFER 735

Query: 260 KDDHQIVYGVPLIANYVRVLVKVVHDADAQLPIPIVGSIESVFDAVGSHVPWPKELIILD 316
              ++IVYGV L    VRVL+++  D+ + LPIP+VGSI  V DA+GSHVPWPK LI+++
Sbjct: 736 ISTNEIVYGVRLGEGDVRVLIELACDSHSLLPIPVVGSIYFVHDAIGSHVPWPKYLIVIE 795

BLAST of Lag0000572 vs. NCBI nr
Match: KAA0053273.1 (putative transposase [Cucumis melo var. makuwa])

HSP 1 Score: 139.0 bits (349), Expect = 1.2e-28
Identity = 79/176 (44.89%), Postives = 111/176 (63.07%), Query Frame = 0

Query: 140 RVRGIGGLIVPSYFFHKLIPSIPKNVAVE-DEPEGWKKEKTQLQRQYNEMEKKLLEMQSQ 199
           RVRG+GGLI  S++FHK IPS PK   +  D    WKKEK+Q+  +Y++M KK+L+++S 
Sbjct: 267 RVRGVGGLITSSFYFHKHIPSQPKETHITIDVDTNWKKEKSQILSEYSQMAKKMLKLKS- 326

Query: 200 MESGRLTSMSDRGSCQQVPDPQPFDERLDQGRSCKLFVEDVKNIVAAGIVFKRKDDHQIV 259
           ++  R TS+     C Q           +  R C L +  V NIVA G VF+R    +IV
Sbjct: 327 LKRTRETSLDAHSGCNQ-----------NIRRPCSLAIGKVDNIVATGTVFERISTGEIV 386

Query: 260 YGVPLIANYVRVLVKVVHDADAQLPIPIVGSIESVFDAVGSHVPWPKELIILDKEK 315
           YGV L    V VL+++  D+ + LPIPIV SI S+ DA+GSHVPWPK LI+++++K
Sbjct: 387 YGVRLGEGDVGVLIELACDSHSLLPIPIVESIYSIHDAIGSHVPWPKYLIVIEEQK 430

BLAST of Lag0000572 vs. NCBI nr
Match: XP_024037590.1 (uncharacterized protein LOC112097210 [Citrus clementina])

HSP 1 Score: 129.8 bits (325), Expect = 7.0e-26
Identity = 60/143 (41.96%), Postives = 88/143 (61.54%), Query Frame = 0

Query: 309 ILDKEKSLLARVLRGRYFKTGHFLKAGIGHNQSYTWRSIVWGQDLFKKGYRWQIGSGINV 368
           I+    SL+ARVL+ RYFK   F+ AG+G   S+ WRSIVWG+ +  KG RW+IG+G NV
Sbjct: 672 IMQFPSSLVARVLKARYFKHTGFMNAGLGSKPSFVWRSIVWGRQVLHKGARWRIGNGQNV 731

Query: 369 KAANDPWIPRKGSCKPILANREAQQLTVAQLMSSCGAWKEDLVRKLFLEEGANNVLHIPI 428
               + WIPR  + KPI A       TVA+L+     W+EDL+ + F  E A  ++ IP+
Sbjct: 732 LVYGNNWIPRPTTFKPISAPSMGTDTTVAELIDEKQQWREDLILQHFRPEDAEAIMQIPL 791

Query: 429 NPQNKMDEIILNLDPKGYFTARA 452
             + K D++I + D KGY++ ++
Sbjct: 792 PKRPKEDQLIWHYDKKGYYSVKS 814

BLAST of Lag0000572 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 3.1e-08
Identity = 28/77 (36.36%), Postives = 43/77 (55.84%), Query Frame = 0

Query: 309 ILDKEKSLLARVLRGRYFKTGHFLKAGIGHNQSYTWRSIVWGQDLFKKGYRWQIGSGINV 368
           I+ +  +LL+R+LR RYF     ++  +G   SY WRSI+ G++L  +G    IG GI+ 
Sbjct: 77  IIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGRELLSRGLLRTIGDGIHT 136

Query: 369 KAANDPWIPRKGSCKPI 386
           K   D WI  +    P+
Sbjct: 137 KVWLDRWIMDETPLPPL 153

BLAST of Lag0000572 vs. ExPASy TrEMBL
Match: A0A6J1DRA0 (uncharacterized protein LOC111022423 OS=Momordica charantia OX=3673 GN=LOC111022423 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 8.3e-33
Identity = 67/143 (46.85%), Postives = 95/143 (66.43%), Query Frame = 0

Query: 309 ILDKEKSLLARVLRGRYFKTGHFLKAGIGHNQSYTWRSIVWGQDLFKKGYRWQIGSGINV 368
           IL    SLLA+ LRG+YFKTG FL+A +G   SY WRSI+WG+DLFKKGYRW++G+G ++
Sbjct: 538 ILRHPDSLLAKTLRGKYFKTGSFLQAKLGARPSYAWRSILWGRDLFKKGYRWKVGNGFSI 597

Query: 369 KAANDPWIPRKGSCKPILANREAQQLTVAQLMSSCGAWKEDLVRKLFLEEGANNVLHIPI 428
             ++DPW+PR G+  P+  +   +  +VA LM   G W E  VR+ F+   A+ +L  P+
Sbjct: 598 NLSSDPWLPRDGNFSPVFTHIHVRNFSVAWLMEGRGRWDEIKVRESFIVSEADIILQTPL 657

Query: 429 NPQNKMDEIILNLDPKGYFTARA 452
             Q+K DEII  +D  G F+ R+
Sbjct: 658 PSQDKDDEIIWGMDKTGIFSVRS 680

BLAST of Lag0000572 vs. ExPASy TrEMBL
Match: A0A5D3CIW3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G00110 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.1e-31
Identity = 87/205 (42.44%), Postives = 125/205 (60.98%), Query Frame = 0

Query: 126 GTGAARGLIERFSRRVRGIGGLIVPSYFFHKLIPSIPKNV-AVEDEPEGWKKEKTQLQRQ 185
           GT   RG       RVRG+GGLI  S++FHK IPS P+      D    WKKEK+Q+  +
Sbjct: 165 GTSEHRG-------RVRGVGGLITSSFYFHKHIPSQPRETHTTVDVDANWKKEKSQILSE 224

Query: 186 YNEMEKKLLEMQSQMESGRLTSMSDRGSCQQVPDPQPF-------DERLDQGRSCKLFVE 245
           Y++M KK+L+++S ++  R TS+     C Q    + F        ++++ GR C L V 
Sbjct: 225 YSQMAKKMLKLKS-LKRTRETSLDAHSGCNQNISEKQFISTSIHHTKKINLGRPCSLAVG 284

Query: 246 DVKNIVAAGIVFKRKDDHQIVYGVPLIANYVRVLVKVVHDADAQLPIPIVGSIESVFDAV 305
            V NIVA G VF+R    +IVYGV L    VRVL+++  D+ + LPIPIV SI S+ DA+
Sbjct: 285 KVDNIVATGTVFERISTGEIVYGVRLGEGDVRVLIELACDSHSLLPIPIVESIYSIHDAI 344

Query: 306 GSHVPWPKELIILDKEKSLLARVLR 323
           GSHVPWPK LI+++++K+  ++  R
Sbjct: 345 GSHVPWPKYLIVIEEQKNTSSKKSR 361

BLAST of Lag0000572 vs. ExPASy TrEMBL
Match: A0A5A7TFT2 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold125G00050 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.7e-31
Identity = 81/184 (44.02%), Postives = 116/184 (63.04%), Query Frame = 0

Query: 140 RVRGIGGLIVPSYFFHKLIPSIPKNVAVE-DEPEGWKKEKTQLQRQYNEMEKKLLEMQSQ 199
           RVRG+GGLI P ++F+K IPS P+   +  D    WKKEK+Q+  +Y++M K+ L+    
Sbjct: 616 RVRGVGGLITPLFYFYKHIPSEPRETHITVDVDANWKKEKSQILSEYSQMAKQTLK---S 675

Query: 200 MESGRLTSMSDRGSCQQVPDPQPF-------DERLDQGRSCKLFVEDVKNIVAAGIVFKR 259
           ++  R TS+     C Q    + F        E++D GR C L V  V NIV+ G VF+R
Sbjct: 676 LKRNRETSLDAHSGCNQNISEKQFISMSNHHTEKIDLGRPCSLAVGKVDNIVSTGTVFER 735

Query: 260 KDDHQIVYGVPLIANYVRVLVKVVHDADAQLPIPIVGSIESVFDAVGSHVPWPKELIILD 316
              ++IVYGV L    VRVL+++  D+ + LPIP+VGSI  V DA+GSHVPWPK LI+++
Sbjct: 736 ISTNEIVYGVRLGEGDVRVLIELACDSHSLLPIPVVGSIYFVHDAIGSHVPWPKYLIVIE 795

BLAST of Lag0000572 vs. ExPASy TrEMBL
Match: A0A5A7UBK9 (Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00720 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 5.6e-29
Identity = 79/176 (44.89%), Postives = 111/176 (63.07%), Query Frame = 0

Query: 140 RVRGIGGLIVPSYFFHKLIPSIPKNVAVE-DEPEGWKKEKTQLQRQYNEMEKKLLEMQSQ 199
           RVRG+GGLI  S++FHK IPS PK   +  D    WKKEK+Q+  +Y++M KK+L+++S 
Sbjct: 267 RVRGVGGLITSSFYFHKHIPSQPKETHITIDVDTNWKKEKSQILSEYSQMAKKMLKLKS- 326

Query: 200 MESGRLTSMSDRGSCQQVPDPQPFDERLDQGRSCKLFVEDVKNIVAAGIVFKRKDDHQIV 259
           ++  R TS+     C Q           +  R C L +  V NIVA G VF+R    +IV
Sbjct: 327 LKRTRETSLDAHSGCNQ-----------NIRRPCSLAIGKVDNIVATGTVFERISTGEIV 386

Query: 260 YGVPLIANYVRVLVKVVHDADAQLPIPIVGSIESVFDAVGSHVPWPKELIILDKEK 315
           YGV L    V VL+++  D+ + LPIPIV SI S+ DA+GSHVPWPK LI+++++K
Sbjct: 387 YGVRLGEGDVGVLIELACDSHSLLPIPIVESIYSIHDAIGSHVPWPKYLIVIEEQK 430

BLAST of Lag0000572 vs. ExPASy TrEMBL
Match: A0A803PJK4 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.9e-24
Identity = 56/143 (39.16%), Postives = 87/143 (60.84%), Query Frame = 0

Query: 309  ILDKEKSLLARVLRGRYFKTGHFLKAGIGHNQSYTWRSIVWGQDLFKKGYRWQIGSGINV 368
            ILD   SL +R+L+ RYFK G FL AG+G   S TWR IVWG++L + G RW++G+G+ +
Sbjct: 1349 ILDNPSSLFSRLLKQRYFKDGTFLNAGLGSYPSMTWRGIVWGKELLQHGLRWKVGNGLQI 1408

Query: 369  KAANDPWIPRKGSCKPILANREAQQLTVAQLMSSCGAWKEDLVRKLFLEEGANNVLHIPI 428
            K A DPW+P   S KP+L       LTV++L+     W    ++  FL+   + +L IP+
Sbjct: 1409 KCATDPWLPSHTSFKPLLFKGSDFNLTVSELIDCDRQWHMPSLKSNFLDIDIDKILSIPL 1468

Query: 429  NPQNKMDEIILNLDPKGYFTARA 452
            +  +  D+II + +  G +T ++
Sbjct: 1469 STFSHDDKIIWHHETTGIYTVKS 1491

BLAST of Lag0000572 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 64.7 bits (156), Expect = 2.6e-10
Identity = 37/155 (23.87%), Postives = 71/155 (45.81%), Query Frame = 0

Query: 309 ILDKEKSLLARVLRGRYFKTGHFLKAGIGHNQSYTWRSIVWGQDLFKKGYRWQIGSGINV 368
           +L + +SL+A+V + RYF     L A +G   S+ W+SI   Q++ ++G R  +G+G ++
Sbjct: 76  MLSRPESLMAKVFKSRYFHKSDPLNAPLGSRPSFVWKSIHASQEILRQGARAVVGNGEDI 135

Query: 369 KAANDPWIPRKGSCKPILANREAQQ--------LTVAQLMSSCG-AWKEDLVRKLFLEEG 428
                 W+  K +   +   R   Q        L V+ L+   G  W++D++  LF E  
Sbjct: 136 IIWRHKWLDSKPASAALRMQRVPPQEYASVSSILKVSDLIDESGREWRKDVIEMLFPEVE 195

Query: 429 ANNVLHIPINPQNKMDEIILNLDPKGYFTARARCW 455
              +  +    +  +D    +    G +T ++  W
Sbjct: 196 RKLIGELRPGGRRILDSYTWDYTSSGDYTVKSGYW 230

BLAST of Lag0000572 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 64.3 bits (155), Expect = 3.4e-10
Identity = 44/153 (28.76%), Postives = 72/153 (47.06%), Query Frame = 0

Query: 321 LRGRYFKTGHFLKAGIGHNQSYTWRSIVWGQDLFKKGYRWQIGSGINVKAANDPWIPRKG 380
           ++ RYFK    L A +   QSY W S++ G  L KKG R  IG G N++   D  I    
Sbjct: 1   MKARYFKDVSILDAKVRKQQSYGWASLLDGIALLKKGTRHLIGDGQNIRIGLDN-IVDSH 60

Query: 381 SCKPILANREAQQLTVAQLMSSCGA---WKEDLVRKLFLEEGANNVLH-IPINPQNKMDE 440
             +P+      +++T+  L    G+   W +  + + F+++  +  +H I +    K D+
Sbjct: 61  PPRPLNTEETYKEMTINNLFERKGSYYFWDDSKISQ-FVDQSDHGFIHRIYLAKSKKPDK 120

Query: 441 IILNLDPKGYFTARARCWTDMSMGSWILNIDAS 470
           II N +  G +T R+        G W+L  D S
Sbjct: 121 IIWNYNTTGEYTVRS--------GYWLLTHDPS 143

BLAST of Lag0000572 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 61.6 bits (148), Expect = 2.2e-09
Identity = 28/77 (36.36%), Postives = 43/77 (55.84%), Query Frame = 0

Query: 309 ILDKEKSLLARVLRGRYFKTGHFLKAGIGHNQSYTWRSIVWGQDLFKKGYRWQIGSGINV 368
           I+ +  +LL+R+LR RYF     ++  +G   SY WRSI+ G++L  +G    IG GI+ 
Sbjct: 77  IIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGRELLSRGLLRTIGDGIHT 136

Query: 369 KAANDPWIPRKGSCKPI 386
           K   D WI  +    P+
Sbjct: 137 KVWLDRWIMDETPLPPL 153

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022155286.11.7e-3246.85uncharacterized protein LOC111022423 [Momordica charantia][more]
TYK11863.14.2e-3142.44uncharacterized protein E5676_scaffold177G00110 [Cucumis melo var. makuwa][more]
KAA0040896.15.5e-3144.02transposase [Cucumis melo var. makuwa][more]
KAA0053273.11.2e-2844.89putative transposase [Cucumis melo var. makuwa][more]
XP_024037590.17.0e-2641.96uncharacterized protein LOC112097210 [Citrus clementina][more]
Match NameE-valueIdentityDescription
P932953.1e-0836.36Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ... [more]
Match NameE-valueIdentityDescription
A0A6J1DRA08.3e-3346.85uncharacterized protein LOC111022423 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A5D3CIW32.1e-3142.44Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7TFT22.7e-3144.02Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold125G00050 PE... [more]
A0A5A7UBK95.6e-2944.89Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102... [more]
A0A803PJK41.9e-2439.16Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G29090.12.6e-1023.87Ribonuclease H-like superfamily protein [more]
AT3G09510.13.4e-1028.76Ribonuclease H-like superfamily protein [more]
ATMG00310.12.2e-0936.36RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 178..198

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0000572.1Lag0000572.1mRNA