Lag0000560 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0000560
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr4: 9936847 .. 9939295 (+)
RNA-Seq ExpressionLag0000560
SyntenyLag0000560
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACGCGTTGAACGGTACCAGATCTGGTCCATCAATACCCAGTGATCAGAAACGACAAAGAAAAGCAAATTGGCGAAAAGGGGTTTGGGGTTTTAGACAGATTCAGACTCAGAAACGCAGTTTTTTTGGGGTTTTAGACAAAGAAAACCCACCTTTTTGCTTCTTCAACCCATCTTCAAAGAAAAGTGACACAACAAGGGGTCTATCCTCCGACGAGCATCTTCTTCACAAAGAAAACCCATCTTTTTCTCTGTCGCTCGATTCAGACGCTTCTCGTACCAGATCTGGGTTGCTCGCGCCGAGTCGGTTCAACGCTTCATGTGGGTTGCTCGTACCAGATCTGGGTTGCTCGTGACGATTTGTTGTACGATTTGCTCCAGATCCGCAGATCTGCTCCAGATCTCGCCGGAATCGGAACCCGAACGTTCCAGTTACCTGTTCGTGGTAGAGGAAAGAGAAATGGCTGTTCGTGAGAGAAGATTGAAGCGATGGGAGGAAAACTGGAAAAGAGGCGTGAGCGCGACAGATTGGAGCCCTAAACCCTAAAATTTTTATATTTAAGTGAAAGTTGCGAACCGAACCGAACCGAGTCGGTTCGGGTCGGGTCGGTTTGAATATATGTAAAAATCGAACCGAACCGGTTCGGTTAGGTTTTCTTCACCCCTAATATGCGTGCATGGATTTTGAAAAGCATGACTTGTGAGAAAAATATATGACGTTTAGTCATAACTTTAATTTGTGTCGATAGGAAATTAATCAGAATATTAACTTATAATTCCAAATAATTTCGATTTTCGCCACCAACATTAATTTTGGCCAAATTTTGAATTTTGATTTCCAATATTTTTTTTTTTTTGAAATTGGAAAATTAATTTTAGTCAAAATTGTGACAAATTTTTTTCTCACCACCTTAGACATGAATTTGGAGGTAGATAGGCACTTTGAACAAAAAAATTGGAGGCCTCTTGGCTTGCCAATTTTATTAGGCCAAGATTTATTTCTTGATCCATATAACTTGGAGGCAAAATTTTTTTACCTTAATGCCAATTGTAGGAAATTCCTTTCCATATTTGATTAGGCAAAAATTTCCTTGGCCAAGAATAAATTTTTCCTTATGTGTTTGACCTAATTTTTCCCTTATAAATTGAATAAGTTGGATTGGTCAAGACACAAAGCCACTCAAGCAAGAAGTCTAGGTAAGAAAAATTCTTTCCTCTTTAATTTCTCTTTTCTTTCTTTCATTCGACTTCAAATGCTCATATATTTTCTTCTTTATGTAGGCCTTGAGTTCGAGCGATAATCTCCCTTCGTGCCTCTTTGTCGCGCCGTCAGTAAGAACGATCTTCAAGTTTTTTCTTTTTTTAAAAAAAAAATTATAACCATAAACTACGGCTGTAGGTTAATTTTTTATTCTTGCCACCGTTTTTTTTTTCTGGACTATAGTAATCACATGTCGCTTCAAAACACATAAATGTGTATACAACTTATGCATGTTGGTTACATATTTGTTGAATAAGGAACATAACAGATTTTTTATTATTATTTTTATTATTATTTCTTTCCGCATGTATCCCACGCATACACGACATTAGGTTAAGTTCAGCTGGCCTCTTTTTTTTTTAATCACATATTATATGCTCTGCCGCAAACCATATAAGATTATTTTATTTTATATATATATATATATTTTTAAACCGATGGCCACCAATGCCTTGCATCTCACATGCACACATATATGTGTGTGTTTGGCCGTAAGTGTATATATATATATATATAATTTTTTTTTAATAACGAATTTTTCACCATCGAAAACACTACCATGTGTATCCAGGGTTGCGCGTCGCTGTTCATATTTTCAAGTTTTTTTTTCTTCTTTTTTTTTCAATATTCTACGGAAAAACTGACTCCCCTCTTTATTTTTTTTTTACTTTGTCATAAACCGATCGTTCTTTCCTTTCTTCTTCTTCTTTTTTTTTTTTTTTTTTTTTTTTTGCTGTATGATGCCCTTTTTTTAAACCAATTTTTTTTAATTTTAAATTTTGCAACTAGAACATTTTTTTTTAATTATCTTTATTTCTTTATAGGATTTGGAATTGACAAGTTTGTTTGATAATCTCCTTGGATCAATCTTTATCCACCATTTGAAAGGTATATACATATTCAAACTTTTTTTTTTTTTGAATATGCATATATTCCATTGGCGTCTTTATTGAATGTGCACATATGAACTGCCTTGATTGTGCCATAGATTTTTTTTTTTTTTTGCACATATATTATTGCAATTTGCTTCTTTCTTGCTTAAATGTGTAAGCATCTTGCAGCAATCGTTTCCAAATTCACTTGTAGTGATTTCACTCCTGCTAGACCAGTCCCCTATCTTATTGGGTGATCTGAGTAGCCTGCAGGGGCAGTCACCCGATTCGTCCACCGTGATGCACTCCTGCTAG

mRNA sequence

ATGAACGCGTTGAACGGTACCAGATCTGGTCCATCAATACCCAGTGATCAGAAACGACAAAGAAAAGCAAATTGGCGAAAAGGGGTTTGGGGTTTTAGACAGATTCAGACTCAGAAACGCAGTTTTTTTGGGGTTTTAGACAAAGAAAACCCACCTTTTTGCTTCTTCAACCCATCTTCAAAGAAAAGTGACACAACAAGGGGTCTATCCTCCGACGAGCATCTTCTTCACAAAGAAAACCCATCTTTTTCTCTGTCGCTCGATTCAGACGCTTCTCGTACCAGATCTGGGTTGCTCGCGCCGAGTCGGTTCAACGCTTCATATCTGCTCCAGATCTCGCCGGAATCGGAACCCGAACGTTCCAGTTACCTGTTCGTGGTAGAGGAAAGAGAAATGGCTGTTCGTGAGAGAAGATTGAAGCGATGGGAGGAAAACTGGAAAAGAGGCGCCTTGAGTTCGAGCGATAATCTCCCTTCGTGCCTCTTTGTCGCGCCGTCACAATCGTTTCCAAATTCACTTGTAGTGATTTCACTCCTGCTAGACCAGTCCCCTATCTTATTGGGTGATCTGAGTAGCCTGCAGGGGCAGTCACCCGATTCGTCCACCGTGATGCACTCCTGCTAG

Coding sequence (CDS)

ATGAACGCGTTGAACGGTACCAGATCTGGTCCATCAATACCCAGTGATCAGAAACGACAAAGAAAAGCAAATTGGCGAAAAGGGGTTTGGGGTTTTAGACAGATTCAGACTCAGAAACGCAGTTTTTTTGGGGTTTTAGACAAAGAAAACCCACCTTTTTGCTTCTTCAACCCATCTTCAAAGAAAAGTGACACAACAAGGGGTCTATCCTCCGACGAGCATCTTCTTCACAAAGAAAACCCATCTTTTTCTCTGTCGCTCGATTCAGACGCTTCTCGTACCAGATCTGGGTTGCTCGCGCCGAGTCGGTTCAACGCTTCATATCTGCTCCAGATCTCGCCGGAATCGGAACCCGAACGTTCCAGTTACCTGTTCGTGGTAGAGGAAAGAGAAATGGCTGTTCGTGAGAGAAGATTGAAGCGATGGGAGGAAAACTGGAAAAGAGGCGCCTTGAGTTCGAGCGATAATCTCCCTTCGTGCCTCTTTGTCGCGCCGTCACAATCGTTTCCAAATTCACTTGTAGTGATTTCACTCCTGCTAGACCAGTCCCCTATCTTATTGGGTGATCTGAGTAGCCTGCAGGGGCAGTCACCCGATTCGTCCACCGTGATGCACTCCTGCTAG

Protein sequence

MNALNGTRSGPSIPSDQKRQRKANWRKGVWGFRQIQTQKRSFFGVLDKENPPFCFFNPSSKKSDTTRGLSSDEHLLHKENPSFSLSLDSDASRTRSGLLAPSRFNASYLLQISPESEPERSSYLFVVEEREMAVRERRLKRWEENWKRGALSSSDNLPSCLFVAPSQSFPNSLVVISLLLDQSPILLGDLSSLQGQSPDSSTVMHSC
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..18
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0000560.1Lag0000560.1mRNA