Lag0000481 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0000481
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Unknown protein
Location	chr4: 8304684 .. 8305996 (+)
RNA-Seq Expression	Lag0000481
Synteny	Lag0000481

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAACGTAACAGGGAGCGAATTGGCCGGCTTCGCAGTGGGGGCTCTGCTCGTTTGTGCCACCATTTCTGCTCCTAGAATCGATGCTTTCATCTCTTCTTCCCAGCGCAGGTTTTGTTCTATTCTTCCGATTATTCACTCCTCAAAGCTGATTTCCATGTTTTCATGTTCTGTGTTCTTGAATTCCTAAATTTCACCCAAATTTTGGCGGATTCTGTGCGATAATCAGATGGAGGATACGAATTGAACCGAACCGAGCTTATGAAGTTTATTCGTTTTAGTTTTTGTTAAATTGAGTCTGTTGGACACTGCTTGATTGTGTTGCACATTTGTGGATAAAGAAAGCCAAATTGGTTTCTGCTTTATGGTTTATGTTTTTTGGTTGTATCTTGTACTTGTACACTGAAATTTTACATGTGATTGATTTCCAAAGGGGAAAACAGAGAAACCAAAAACATGGATGGGTGTTGTTCATATCTGATAATTGCATTTTGAATGGATACATTTTGTACCCTTTAAATGGTTTAGGAAGGTGGTCCTATCCCATATTCATTAGTCTCATTCGTTCATTGAACCTCAACCTTCTATGCGACTCCTTGATCCCTTCCTTTGGACAAATTATTTGAGGTAAATAGAACAATGTGGCTGGTGATTGTACACCATTCAATGTATATGAGAAAGAATTTAAAAACTGTTTTTCAAATCGGTATCAAACAGTTATTAGGGACAAATAGATCTTAAACCGGCATCGAGCCGTTATTAGGGAGGAGTCACATTATGACAGATATATCGAATAATTTTTCCTTCTTTTGTTCTTGTTTGAGGATAAACTCCCTAAACCATCTATATTCAAGTGAGTCTTTACTAAAGTAGAACACATGAAATTTCCCTCTAATATCTTGATGGCTCCACGCCTTGTATTATGCTCATGTCCACTCCAAACTTTCAAAGAGGCTTCATCCATCCGCTCTAAGATGAACTTCGAAAGATATCGAGAGTTTTAAATTGTTAAGTTTTCTATGTGAGGCTTTTTAGTATAGGTTTGGTTTCTGAAATCAATGTGATTATGTTCTCTGTTTGGACAGTTCCTTGGGCATGTGCAAGAGATGTGGAGACCTGAGGATGATAGCTTGTTCAAAATGTAAAGGAGTTGGATCAATCAAAGCAGGTGGACTGTTTGGTGTTAACATTCTTGCTGACTTTTATGAATCATTTGGCAAAGACGAATCTATTCCGCCTTCAATCCCGTGCACGAGGTGCAACGCCAAAGGTCGTTTCCAATGTCCAGATTGCTGCTCTCAAATGTCATGA

mRNA sequence

ATGGAAAACGTAACAGGGAGCGAATTGGCCGGCTTCGCAGTGGGGGCTCTGCTCGTTTGTGCCACCATTTCTGCTCCTAGAATCGATGCTTTCATCTCTTCTTCCCAGCGCAGTTCCTTGGGCATGTGCAAGAGATGTGGAGACCTGAGGATGATAGCTTGTTCAAAATGTAAAGGAGTTGGATCAATCAAAGCAGGTGGACTGTTTGGTGTTAACATTCTTGCTGACTTTTATGAATCATTTGGCAAAGACGAATCTATTCCGCCTTCAATCCCGTGCACGAGGTGCAACGCCAAAGGTCGTTTCCAATGTCCAGATTGCTGCTCTCAAATGTCATGA

Coding sequence (CDS)

ATGGAAAACGTAACAGGGAGCGAATTGGCCGGCTTCGCAGTGGGGGCTCTGCTCGTTTGTGCCACCATTTCTGCTCCTAGAATCGATGCTTTCATCTCTTCTTCCCAGCGCAGTTCCTTGGGCATGTGCAAGAGATGTGGAGACCTGAGGATGATAGCTTGTTCAAAATGTAAAGGAGTTGGATCAATCAAAGCAGGTGGACTGTTTGGTGTTAACATTCTTGCTGACTTTTATGAATCATTTGGCAAAGACGAATCTATTCCGCCTTCAATCCCGTGCACGAGGTGCAACGCCAAAGGTCGTTTCCAATGTCCAGATTGCTGCTCTCAAATGTCATGA

Protein sequence

MENVTGSELAGFAVGALLVCATISAPRIDAFISSSQRSSLGMCKRCGDLRMIACSKCKGVGSIKAGGLFGVNILADFYESFGKDESIPPSIPCTRCNAKGRFQCPDCCSQMS

Homology

[Close]

BLAST of Lag0000481 vs. NCBI nr
Match: XP_038901067.1 (uncharacterized protein LOC120088085 [Benincasa hispida])

HSP 1 Score: 216.1 bits (549), Expect = 1.6e-52
Identity = 103/112 (91.96%), Postives = 109/112 (97.32%), Query Frame = 0


Query: 1   MENVTGSELAGFAVGALLVCATISAPRIDAFISSSQRSSLGMCKRCGDLRMIACSKCKGV 60
           ME++TGSELAGFAVGALLVCA+ISAPRIDAFISSSQR SLGMCKRCGDLRMIACSKCKGV
Sbjct: 1   MESITGSELAGFAVGALLVCASISAPRIDAFISSSQRRSLGMCKRCGDLRMIACSKCKGV 60

Query: 61  GSIKAGGLFGVNILADFYESFGKDESIPPSIPCTRCNAKGRFQCPDCCSQMS 113
           GSIK+GGLFGVNILA+FYESFGKDES  PSIPCTRCNAKGRFQCPDCCSQM+
Sbjct: 61  GSIKSGGLFGVNILAEFYESFGKDESNAPSIPCTRCNAKGRFQCPDCCSQMT 112

[Close]

BLAST of Lag0000481 vs. NCBI nr
Match: XP_004137138.1 (uncharacterized protein LOC101207960 [Cucumis sativus] >KGN53782.1 hypothetical protein Csa_015216 [Cucumis sativus])

HSP 1 Score: 210.3 bits (534), Expect = 8.6e-51
Identity = 99/112 (88.39%), Postives = 107/112 (95.54%), Query Frame = 0


Query: 1   MENVTGSELAGFAVGALLVCATISAPRIDAFISSSQRSSLGMCKRCGDLRMIACSKCKGV 60
           ME++TGSELAGFAVGALLVCATISAPRIDAFISSSQR SLGMCKRCGDLRMIACSKCKGV
Sbjct: 1   MESITGSELAGFAVGALLVCATISAPRIDAFISSSQRRSLGMCKRCGDLRMIACSKCKGV 60

Query: 61  GSIKAGGLFGVNILADFYESFGKDESIPPSIPCTRCNAKGRFQCPDCCSQMS 113
           GS K+GGLFG+NILADFYE+ GKDES  PSIPCTRCNAKGRF+CPDCCSQ++
Sbjct: 61  GSTKSGGLFGINILADFYEALGKDESNVPSIPCTRCNAKGRFRCPDCCSQLT 112

[Close]

BLAST of Lag0000481 vs. NCBI nr
Match: XP_022155031.1 (uncharacterized protein LOC111022174 [Momordica charantia])

HSP 1 Score: 209.9 bits (533), Expect = 1.1e-50
Identity = 101/110 (91.82%), Postives = 105/110 (95.45%), Query Frame = 0


Query: 1   MENVTGSELAGFAVGALLVCATISAPRIDAFISSSQRSSLGMCKRCGDLRMIACSKCKGV 60
           MENVT SE+AGFAVGALLVCATISAPRIDAFISSSQRSSLGMCKRCGDLRMIACSKC+GV
Sbjct: 1   MENVTASEVAGFAVGALLVCATISAPRIDAFISSSQRSSLGMCKRCGDLRMIACSKCRGV 60

Query: 61  GSIKAGGLFGVNILADFYESFGKDESIPPSIPCTRCNAKGRFQCPDCCSQ 111
           GS KAGGLFGVNILADFYESFG+DES  PSIPC+RCNAKGRF CPDCCSQ
Sbjct: 61  GSTKAGGLFGVNILADFYESFGRDESNLPSIPCSRCNAKGRFSCPDCCSQ 110

[Close]

BLAST of Lag0000481 vs. NCBI nr
Match: KAA0045498.1 (uncharacterized protein E6C27_scaffold1202G00430 [Cucumis melo var. makuwa] >TYJ96211.1 uncharacterized protein E5676_scaffold261G00510 [Cucumis melo var. makuwa])

HSP 1 Score: 195.3 bits (495), Expect = 2.9e-46
Identity = 96/112 (85.71%), Postives = 102/112 (91.07%), Query Frame = 0


Query: 1   MENVTGSELAGFAVGALLVCATISAPRIDAFISSSQRSSLGMCKRCGDLRMIACSKCKGV 60
           ME++TGSELAGFAVGALLVCATISAPRIDAFISSSQR SLGMCKRCGDLRMIACSKCKGV
Sbjct: 20  MESITGSELAGFAVGALLVCATISAPRIDAFISSSQRRSLGMCKRCGDLRMIACSKCKGV 79

Query: 61  GSIKAGGLFGVNILADFYESFGKDESIPPSIPCTRCNAKGRFQCPDCCSQMS 113
           GS K+GGLFG+NILADFYES    ES  PSIPC RCNAKGRFQCPDC SQ++
Sbjct: 80  GSTKSGGLFGINILADFYESL--SESNVPSIPCMRCNAKGRFQCPDCSSQLT 129

[Close]

BLAST of Lag0000481 vs. NCBI nr
Match: XP_008464577.2 (PREDICTED: uncharacterized protein LOC103502417 [Cucumis melo])

HSP 1 Score: 195.3 bits (495), Expect = 2.9e-46
Identity = 96/112 (85.71%), Postives = 102/112 (91.07%), Query Frame = 0


Query: 1   MENVTGSELAGFAVGALLVCATISAPRIDAFISSSQRSSLGMCKRCGDLRMIACSKCKGV 60
           ME++TGSELAGFAVGALLVCATISAPRIDAFISSSQR SLGMCKRCGDLRMIACSKCKGV
Sbjct: 1   MESITGSELAGFAVGALLVCATISAPRIDAFISSSQRRSLGMCKRCGDLRMIACSKCKGV 60

Query: 61  GSIKAGGLFGVNILADFYESFGKDESIPPSIPCTRCNAKGRFQCPDCCSQMS 113
           GS K+GGLFG+NILADFYES    ES  PSIPC RCNAKGRFQCPDC SQ++
Sbjct: 61  GSTKSGGLFGINILADFYESL--SESNVPSIPCMRCNAKGRFQCPDCSSQLT 110

The following BLAST results are available for this feature:

BLAST of Lag0000481 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901067.1	1.6e-52	91.96	uncharacterized protein LOC120088085 [Benincasa hispida]	[more]
XP_004137138.1	8.6e-51	88.39	uncharacterized protein LOC101207960 [Cucumis sativus] >KGN53782.1 hypothetical ...	[more]
XP_022155031.1	1.1e-50	91.82	uncharacterized protein LOC111022174 [Momordica charantia]	[more]
KAA0045498.1	2.9e-46	85.71	uncharacterized protein E6C27_scaffold1202G00430 [Cucumis melo var. makuwa] >TYJ...	[more]
XP_008464577.2	2.9e-46	85.71	PREDICTED: uncharacterized protein LOC103502417 [Cucumis melo]	[more]

BLAST of Lag0000481 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37760	CHAPERONE	coord: 1..110
None	No IPR available	PANTHER	PTHR37760:SF1	CHAPERONE	coord: 1..110

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0000481.1	Lag0000481.1	mRNA