Lag0000386 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0000386
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	E2 ubiquitin-conjugating enzyme
Location	chr4: 5551929 .. 5554184 (+)
RNA-Seq Expression	Lag0000386
Synteny	Lag0000386

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCAACTTTGTCTAAAGAAATGGGGATGATGGAATCTCAGCTAAAGCGTTGGAAGGAGACAACTCATGAAGTAGTTTCTGTACATGAGAAAGTGCAGGCACTCGAGACTTTATTAGTTGGGAAGGTTGGGTTTTACCCTTTTTATCCATCTATATCAATTAGATGAATAATGAAATGATATTGTAATAATTTTATGCCTTGTGTTGTTCCTTCTTCCCCTCTGGTGACTAGTGTTAATAAATATGCATGCCCTGAAGAGAATTGGATATGCAGGTGGGGGTTTGGAATTTGGCATTGATAAATTTGTTAATGCCACTTGTTGGTGTTGTGTTTGCTGATCTTGAGTGCTTGTTAGTTACTATATTTTCTATAGTACATACTGAATTTTTAAGAAGTGAGAAAAGTGTGATTATTTCAATTCTTCTCTTTGGACATATGGTTTGGTACTATTTTTCAAAATCTTATTTGTAGGAGAACACTTTAAGCTGGTATATAAATGTGTCTACTATCTACATCGTGGTTCTGGCATTGATACTTTTTGAAGAAAGATGTCAACATGGTTTTGTAATGCAATTTTTTTTTTTTTATTTCTTCCCTTCTTTTGGTGGCTTGGCTATTTATTTCTAGCCTTTGGATCACCTAATAATTTGTTTTTCTTAAAGTTCGATTTATCGTAGGAGGGACAATGAATTTTGAGGAGAGTTAGTATAAATGACTCTATTATGCACTGAAGGTTTGTAATTCTCCTAAAATATTTCCATTATATCTTCTTATGTTGAAGGTATTGATTATTATTTCTTTGTTACAATTCTAGGATGATGAGTGACTACAAAGTGGAGATGGTAGACGCTGGGCTTAGTGAATTTAATGTCAAATTCAACGGTCCAAAAGAAAGTATTCCCTATTTTCATGCTTGCTTCTATTACAATATATTTCTAATTGCTCCAATGGGTAGGGTTGTTGCTGAGTAGTATATTGCAGGTTATTCCATGTGATTTTTCTGTTTCTTGAGACCTTTAGTTTTCATGATTATCCATATGGATGAATTGTGAACAGTACCCATGAACAGTTTATTTGCTTCACACCTTGAAGTTTATTGTCATTGCTTGAGTATTCTAATATATAAAATGCTTGCAACAATGACAGACTTGTATGAAGGTGGAGTTTGGAAAATCCAGGTTGAACTACCTCACGCTTATCCATACAAGTCCTATGTTGATGAACTGTGAGCAACCTAGGTGCATTACTCCATTATTGATTCTTATTTTTGTTAGGTGAAGTAATTAAAGGCTTTCTATTATTGACAAAAAAGAAAGGGTTATATGATGCACTCCAAATCTCCCAGGTCTTATAATTTCATATGGTAGTTTTACCATCTCACTCATTGCAATTATTCTTTTTTGAGTTTTTATTGGTTGTAGTTTGAACTTGGATAGTTGACTATATAATTGTTAGCATATGTAGATATAATCGCTTTAATATGTCTGTCATTTGTTAGTTATCTAAATTAGTATTTCTATGAATATTTTTTCTGTGAATGCTCTGTTACTAGGGAAACTAAAGCTTTTGTTAATGTATTCTTATTGAGGGAGAGTTGCGTTTTATTGAATTTAGCTTCATTTCCTTTTCTTTCTCTCATTCTTGCACTACAACATTCATGGTTTGATTGTTTGAAAGAAGCTAATAAAGATGTTACTAAAGTAAGACATTGACCTTCATTTCCCTCTTCTTTCTCCGGTGGATAGAAGGATTGATTTAGCTCACTTGTTATTGTTTCACCTTGCACTTGCAGAGTGATTGAGTGTGTAGGAAAGGATGTTAATGAAGTTAAGGAAGGAGATATTGTGATCCCAACTTCTTGGTCGAGTGCAGGGAGTGTGTGGATTGCTTATCAAATAAGAGCAATCAGTGTTTTGAACTCCCTTTCAACATTCATGTTTGGTTTGTTTTTGTTTTTTTTTTTTTTTGTTTTTTTTGTTATTTTGCTTTGTTTTCATCTTCAAGGGTAGGTTGGCAAACATAGTTCTTGCATAGAATAACCAACAAAAAAAACTCTGTTGAAAGTTACAACATAGAGGGCCAAGGCATTTATCATTTGAGCGATGATTGGTAAATGTTTCACTATTCTTACCTAGCATTTTGTTGAAAGCTTTTCATTTATATTGCAGGTTTTTTGGATTTTCTATCATGTTATTGCACACAATCTGTTAGGCTAATGAATCGTGTTGTTTACTGCGTAATCGATATCTAA

mRNA sequence

ATGGCGTCAACTTTGTCTAAAGAAATGGGGATGATGGAATCTCAGCTAAAGCGTTGGAAGGAGACAACTCATGAAGTAGTTTCTGTACATGAGAAAGTGCAGGCACTCGAGACTTTATTAGTTGGGAAGGTGGGGGTTTGGAATTTGGCATTGATAAATTTGTTAATGCCACTTGTTGGTGTTGTGTTTGCTGATCTTGAGTGCTTGATGATGAGTGACTACAAAGTGGAGATGGTAGACGCTGGGCTTAGTGAATTTAATGTCAAATTCAACGGTCCAAAAGAAAACTTGTATGAAGGTGGAGTTTGGAAAATCCAGGTTGAACTACCTCACGCTTATCCATACAAGTCCTATGTTGATGAACTAGTGATTGAGTGTGTAGGAAAGGATGTTAATGAAGTTAAGGAAGGAGATATTGTGATCCCAACTTCTTGGTCGAGTGCAGGGAGTGTGTGGATTGCTTATCAAATAAGAGCAATCAGTGTTTTGAACTCCCTTTCAACATTCATGTTTGGTTTTTTGGATTTTCTATCATGTTATTGCACACAATCTGTTAGGCTAATGAATCGTGTTGTTTACTGCGTAATCGATATCTAA

Coding sequence (CDS)

ATGGCGTCAACTTTGTCTAAAGAAATGGGGATGATGGAATCTCAGCTAAAGCGTTGGAAGGAGACAACTCATGAAGTAGTTTCTGTACATGAGAAAGTGCAGGCACTCGAGACTTTATTAGTTGGGAAGGTGGGGGTTTGGAATTTGGCATTGATAAATTTGTTAATGCCACTTGTTGGTGTTGTGTTTGCTGATCTTGAGTGCTTGATGATGAGTGACTACAAAGTGGAGATGGTAGACGCTGGGCTTAGTGAATTTAATGTCAAATTCAACGGTCCAAAAGAAAACTTGTATGAAGGTGGAGTTTGGAAAATCCAGGTTGAACTACCTCACGCTTATCCATACAAGTCCTATGTTGATGAACTAGTGATTGAGTGTGTAGGAAAGGATGTTAATGAAGTTAAGGAAGGAGATATTGTGATCCCAACTTCTTGGTCGAGTGCAGGGAGTGTGTGGATTGCTTATCAAATAAGAGCAATCAGTGTTTTGAACTCCCTTTCAACATTCATGTTTGGTTTTTTGGATTTTCTATCATGTTATTGCACACAATCTGTTAGGCTAATGAATCGTGTTGTTTACTGCGTAATCGATATCTAA

Protein sequence

MASTLSKEMGMMESQLKRWKETTHEVVSVHEKVQALETLLVGKVGVWNLALINLLMPLVGVVFADLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKSYVDELVIECVGKDVNEVKEGDIVIPTSWSSAGSVWIAYQIRAISVLNSLSTFMFGFLDFLSCYCTQSVRLMNRVVYCVIDI

Homology

[Close]

BLAST of Lag0000386 vs. NCBI nr
Match: XP_022137205.1 (ubiquitin-conjugating enzyme E2-23 kDa-like isoform X2 [Momordica charantia])

HSP 1 Score: 97.1 bits (240), Expect = 1.9e-16
Identity = 52/85 (61.18%), Postives = 62/85 (72.94%), Query Frame = 0


Query: 65  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKSYVDELVI 124
           D+  LMMSDYKVEM+D GLSEFNV+FNGPKE+LYEGGVWKI VELP AYPYKS     V 
Sbjct: 11  DVMKLMMSDYKVEMIDDGLSEFNVEFNGPKESLYEGGVWKIHVELPDAYPYKSPSIGFVN 70

Query: 125 ECVGKDVNEVKEGDI---VIPTSWS 147
           +    +V+E+  G +   VI  +WS
Sbjct: 71  KIYHPNVDEL-SGSVCLDVINQAWS 94

[Close]

BLAST of Lag0000386 vs. NCBI nr
Match: XP_022137204.1 (ubiquitin-conjugating enzyme E2-23 kDa-like isoform X1 [Momordica charantia])

HSP 1 Score: 97.1 bits (240), Expect = 1.9e-16
Identity = 52/85 (61.18%), Postives = 62/85 (72.94%), Query Frame = 0


Query: 65  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKSYVDELVI 124
           D+  LMMSDYKVEM+D GLSEFNV+FNGPKE+LYEGGVWKI VELP AYPYKS     V 
Sbjct: 11  DVMKLMMSDYKVEMIDDGLSEFNVEFNGPKESLYEGGVWKIHVELPDAYPYKSPSIGFVN 70

Query: 125 ECVGKDVNEVKEGDI---VIPTSWS 147
           +    +V+E+  G +   VI  +WS
Sbjct: 71  KIYHPNVDEL-SGSVCLDVINQAWS 94

[Close]

BLAST of Lag0000386 vs. NCBI nr
Match: XP_011651465.1 (ubiquitin-conjugating enzyme E2-23 kDa isoform X2 [Cucumis sativus])

HSP 1 Score: 95.9 bits (237), Expect = 4.2e-16
Identity = 51/85 (60.00%), Postives = 62/85 (72.94%), Query Frame = 0


Query: 65  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKSYVDELVI 124
           D+  LMMSDYKVEM+D GLSEFNV+FNGPKE++YEGGVWKI VELP AYPYKS     V 
Sbjct: 11  DVMKLMMSDYKVEMIDDGLSEFNVEFNGPKESVYEGGVWKIHVELPDAYPYKSPSIGFVN 70

Query: 125 ECVGKDVNEVKEGDI---VIPTSWS 147
           +    +V+E+  G +   VI  +WS
Sbjct: 71  KIYHPNVDEL-SGSVCLDVINQTWS 94

[Close]

BLAST of Lag0000386 vs. NCBI nr
Match: XP_004152466.1 (ubiquitin-conjugating enzyme E2-23 kDa isoform X1 [Cucumis sativus] >XP_008438150.1 PREDICTED: ubiquitin-conjugating enzyme E2-23 kDa-like [Cucumis melo] >XP_008438158.1 PREDICTED: ubiquitin-conjugating enzyme E2-23 kDa-like [Cucumis melo] >XP_011651462.1 ubiquitin-conjugating enzyme E2-23 kDa isoform X1 [Cucumis sativus] >XP_031743574.1 ubiquitin-conjugating enzyme E2-23 kDa isoform X1 [Cucumis sativus] >XP_031743578.1 ubiquitin-conjugating enzyme E2-23 kDa isoform X1 [Cucumis sativus] >KGN64301.2 hypothetical protein Csa_013725 [Cucumis sativus])

HSP 1 Score: 95.9 bits (237), Expect = 4.2e-16
Identity = 51/85 (60.00%), Postives = 62/85 (72.94%), Query Frame = 0


Query: 65  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKSYVDELVI 124
           D+  LMMSDYKVEM+D GLSEFNV+FNGPKE++YEGGVWKI VELP AYPYKS     V 
Sbjct: 11  DVMKLMMSDYKVEMIDDGLSEFNVEFNGPKESVYEGGVWKIHVELPDAYPYKSPSIGFVN 70

Query: 125 ECVGKDVNEVKEGDI---VIPTSWS 147
           +    +V+E+  G +   VI  +WS
Sbjct: 71  KIYHPNVDEL-SGSVCLDVINQTWS 94

[Close]

BLAST of Lag0000386 vs. NCBI nr
Match: XP_022954942.1 (ubiquitin-conjugating enzyme E2-23 kDa-like [Cucurbita moschata] >XP_022954943.1 ubiquitin-conjugating enzyme E2-23 kDa-like [Cucurbita moschata] >XP_022954944.1 ubiquitin-conjugating enzyme E2-23 kDa-like [Cucurbita moschata] >XP_022994669.1 ubiquitin-conjugating enzyme E2-23 kDa-like [Cucurbita maxima] >XP_022994670.1 ubiquitin-conjugating enzyme E2-23 kDa-like [Cucurbita maxima] >XP_022994671.1 ubiquitin-conjugating enzyme E2-23 kDa-like [Cucurbita maxima] >XP_022994672.1 ubiquitin-conjugating enzyme E2-23 kDa-like [Cucurbita maxima] >XP_023541208.1 ubiquitin-conjugating enzyme E2-23 kDa-like [Cucurbita pepo subsp. pepo] >XP_023541209.1 ubiquitin-conjugating enzyme E2-23 kDa-like [Cucurbita pepo subsp. pepo] >XP_023541210.1 ubiquitin-conjugating enzyme E2-23 kDa-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 95.9 bits (237), Expect = 4.2e-16
Identity = 52/85 (61.18%), Postives = 61/85 (71.76%), Query Frame = 0


Query: 65  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKSYVDELVI 124
           D+  LMMSDYKVEMVD GL EFNV+FNGPKE+LYEGGVWKI VELP AYPYKS     V 
Sbjct: 11  DVMKLMMSDYKVEMVDDGLGEFNVEFNGPKESLYEGGVWKIHVELPDAYPYKSPSIGFVN 70

Query: 125 ECVGKDVNEVKEGDI---VIPTSWS 147
           +    +V+E+  G +   VI  +WS
Sbjct: 71  KIYHPNVDEL-SGSVCLDVINQTWS 94

[Close]

BLAST of Lag0000386 vs. ExPASy Swiss-Prot
Match: P42749 (Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana OX=3702 GN=UBC5 PE=2 SV=2)

HSP 1 Score: 87.4 bits (215), Expect = 1.9e-16
Identity = 45/85 (52.94%), Postives = 61/85 (71.76%), Query Frame = 0


Query: 65  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKSYVDELVI 124
           DL  LMMSDYKVEM++ G+ EF V+F+GPK+++YEGGVWKI+VELP AYPYKS     + 
Sbjct: 11  DLMKLMMSDYKVEMINDGMQEFFVEFSGPKDSIYEGGVWKIRVELPDAYPYKSPSVGFIT 70

Query: 125 ECVGKDVNEVKEGDI---VIPTSWS 147
           +    +V+E+  G +   VI  +WS
Sbjct: 71  KIYHPNVDEM-SGSVCLDVINQTWS 94

[Close]

BLAST of Lag0000386 vs. ExPASy Swiss-Prot
Match: P42748 (Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana OX=3702 GN=UBC4 PE=2 SV=2)

HSP 1 Score: 86.3 bits (212), Expect = 4.3e-16
Identity = 44/85 (51.76%), Postives = 60/85 (70.59%), Query Frame = 0


Query: 65  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKSYVDELVI 124
           D+  LMMSDYKVE ++ G+ EF V+FNGPK++LY+GGVWKI+VELP AYPYKS     + 
Sbjct: 11  DMMKLMMSDYKVETINDGMQEFYVEFNGPKDSLYQGGVWKIRVELPDAYPYKSPSVGFIT 70

Query: 125 ECVGKDVNEVKEGDI---VIPTSWS 147
           +    +V+E+  G +   VI  +WS
Sbjct: 71  KIYHPNVDEL-SGSVCLDVINQTWS 94

[Close]

BLAST of Lag0000386 vs. ExPASy Swiss-Prot
Match: P16577 (Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum OX=4565 GN=UBC4 PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 4.0e-14
Identity = 34/53 (64.15%), Postives = 45/53 (84.91%), Query Frame = 0


Query: 65  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKS 118
           DL  LMMSDYKV+M++ G+ EF V F+GPK+++Y+GGVWK++VEL  AYPYKS
Sbjct: 11  DLMKLMMSDYKVDMINDGMHEFFVHFHGPKDSIYQGGVWKVRVELTEAYPYKS 63

[Close]

BLAST of Lag0000386 vs. ExPASy Swiss-Prot
Match: P42750 (Ubiquitin-conjugating enzyme E2 6 OS=Arabidopsis thaliana OX=3702 GN=UBC6 PE=2 SV=2)

HSP 1 Score: 75.1 bits (183), Expect = 1.0e-12
Identity = 34/53 (64.15%), Postives = 42/53 (79.25%), Query Frame = 0


Query: 65  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKS 118
           D+  LMMSDYKV+ V+  L  F V F+GP ++LY+GGVWKI+VELP AYPYKS
Sbjct: 11  DMMKLMMSDYKVDTVNDDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYPYKS 63

[Close]

BLAST of Lag0000386 vs. ExPASy Swiss-Prot
Match: P28263 (Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=UBC8 PE=1 SV=2)

HSP 1 Score: 68.6 bits (166), Expect = 9.3e-11
Identity = 35/85 (41.18%), Postives = 55/85 (64.71%), Query Frame = 0


Query: 65  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKSYVDELVI 124
           D+  L+MSD++V++++  + EF+VKF GPK+  YE GVW++ VELP  YPYKS     V 
Sbjct: 11  DVMKLLMSDHQVDLINDSMQEFHVKFLGPKDTPYENGVWRLHVELPDNYPYKSPSIGFVN 70

Query: 125 ECVGKDVNEVKEGDI---VIPTSWS 147
           +    ++ ++  G I   VI ++WS
Sbjct: 71  KIFHPNI-DIASGSICLDVINSTWS 94

[Close]

BLAST of Lag0000386 vs. ExPASy TrEMBL
Match: A0A6J1C6K5 (ubiquitin-conjugating enzyme E2-23 kDa-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008728 PE=3 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 9.0e-17
Identity = 52/85 (61.18%), Postives = 62/85 (72.94%), Query Frame = 0


Query: 65  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKSYVDELVI 124
           D+  LMMSDYKVEM+D GLSEFNV+FNGPKE+LYEGGVWKI VELP AYPYKS     V 
Sbjct: 11  DVMKLMMSDYKVEMIDDGLSEFNVEFNGPKESLYEGGVWKIHVELPDAYPYKSPSIGFVN 70

Query: 125 ECVGKDVNEVKEGDI---VIPTSWS 147
           +    +V+E+  G +   VI  +WS
Sbjct: 71  KIYHPNVDEL-SGSVCLDVINQAWS 94

[Close]

BLAST of Lag0000386 vs. ExPASy TrEMBL
Match: A0A6J1C614 (ubiquitin-conjugating enzyme E2-23 kDa-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111008728 PE=3 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 9.0e-17
Identity = 52/85 (61.18%), Postives = 62/85 (72.94%), Query Frame = 0


Query: 65  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKSYVDELVI 124
           D+  LMMSDYKVEM+D GLSEFNV+FNGPKE+LYEGGVWKI VELP AYPYKS     V 
Sbjct: 11  DVMKLMMSDYKVEMIDDGLSEFNVEFNGPKESLYEGGVWKIHVELPDAYPYKSPSIGFVN 70

Query: 125 ECVGKDVNEVKEGDI---VIPTSWS 147
           +    +V+E+  G +   VI  +WS
Sbjct: 71  KIYHPNVDEL-SGSVCLDVINQAWS 94

[Close]

BLAST of Lag0000386 vs. ExPASy TrEMBL
Match: A0A6J1JWI6 (ubiquitin-conjugating enzyme E2-23 kDa-like OS=Cucurbita maxima OX=3661 GN=LOC111490313 PE=3 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 2.0e-16
Identity = 52/85 (61.18%), Postives = 61/85 (71.76%), Query Frame = 0


Query: 65  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKSYVDELVI 124
           D+  LMMSDYKVEMVD GL EFNV+FNGPKE+LYEGGVWKI VELP AYPYKS     V 
Sbjct: 11  DVMKLMMSDYKVEMVDDGLGEFNVEFNGPKESLYEGGVWKIHVELPDAYPYKSPSIGFVN 70

Query: 125 ECVGKDVNEVKEGDI---VIPTSWS 147
           +    +V+E+  G +   VI  +WS
Sbjct: 71  KIYHPNVDEL-SGSVCLDVINQTWS 94

[Close]

BLAST of Lag0000386 vs. ExPASy TrEMBL
Match: A0A1S3AVD3 (ubiquitin-conjugating enzyme E2-23 kDa-like OS=Cucumis melo OX=3656 GN=LOC103483342 PE=3 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 2.0e-16
Identity = 51/85 (60.00%), Postives = 62/85 (72.94%), Query Frame = 0


Query: 65  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKSYVDELVI 124
           D+  LMMSDYKVEM+D GLSEFNV+FNGPKE++YEGGVWKI VELP AYPYKS     V 
Sbjct: 11  DVMKLMMSDYKVEMIDDGLSEFNVEFNGPKESVYEGGVWKIHVELPDAYPYKSPSIGFVN 70

Query: 125 ECVGKDVNEVKEGDI---VIPTSWS 147
           +    +V+E+  G +   VI  +WS
Sbjct: 71  KIYHPNVDEL-SGSVCLDVINQTWS 94

[Close]

BLAST of Lag0000386 vs. ExPASy TrEMBL
Match: A0A6J1GUH1 (ubiquitin-conjugating enzyme E2-23 kDa-like OS=Cucurbita moschata OX=3662 GN=LOC111457050 PE=3 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 2.0e-16
Identity = 52/85 (61.18%), Postives = 61/85 (71.76%), Query Frame = 0


Query: 65  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKSYVDELVI 124
           D+  LMMSDYKVEMVD GL EFNV+FNGPKE+LYEGGVWKI VELP AYPYKS     V 
Sbjct: 11  DVMKLMMSDYKVEMVDDGLGEFNVEFNGPKESLYEGGVWKIHVELPDAYPYKSPSIGFVN 70

Query: 125 ECVGKDVNEVKEGDI---VIPTSWS 147
           +    +V+E+  G +   VI  +WS
Sbjct: 71  KIYHPNVDEL-SGSVCLDVINQTWS 94

[Close]

BLAST of Lag0000386 vs. TAIR 10
Match: AT1G63800.1 (ubiquitin-conjugating enzyme 5 )

HSP 1 Score: 87.4 bits (215), Expect = 1.4e-17
Identity = 45/85 (52.94%), Postives = 61/85 (71.76%), Query Frame = 0


Query: 65  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKSYVDELVI 124
           DL  LMMSDYKVEM++ G+ EF V+F+GPK+++YEGGVWKI+VELP AYPYKS     + 
Sbjct: 11  DLMKLMMSDYKVEMINDGMQEFFVEFSGPKDSIYEGGVWKIRVELPDAYPYKSPSVGFIT 70

Query: 125 ECVGKDVNEVKEGDI---VIPTSWS 147
           +    +V+E+  G +   VI  +WS
Sbjct: 71  KIYHPNVDEM-SGSVCLDVINQTWS 94

[Close]

BLAST of Lag0000386 vs. TAIR 10
Match: AT5G41340.1 (ubiquitin conjugating enzyme 4 )

HSP 1 Score: 86.3 bits (212), Expect = 3.1e-17
Identity = 44/85 (51.76%), Postives = 60/85 (70.59%), Query Frame = 0


Query: 65  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKSYVDELVI 124
           D+  LMMSDYKVE ++ G+ EF V+FNGPK++LY+GGVWKI+VELP AYPYKS     + 
Sbjct: 11  DMMKLMMSDYKVETINDGMQEFYVEFNGPKDSLYQGGVWKIRVELPDAYPYKSPSVGFIT 70

Query: 125 ECVGKDVNEVKEGDI---VIPTSWS 147
           +    +V+E+  G +   VI  +WS
Sbjct: 71  KIYHPNVDEL-SGSVCLDVINQTWS 94

[Close]

BLAST of Lag0000386 vs. TAIR 10
Match: AT2G46030.1 (ubiquitin-conjugating enzyme 6 )

HSP 1 Score: 75.1 bits (183), Expect = 7.1e-14
Identity = 34/53 (64.15%), Postives = 42/53 (79.25%), Query Frame = 0


Query: 65  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKS 118
           D+  LMMSDYKV+ V+  L  F V F+GP ++LY+GGVWKI+VELP AYPYKS
Sbjct: 11  DMMKLMMSDYKVDTVNDDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYPYKS 63

[Close]

BLAST of Lag0000386 vs. TAIR 10
Match: AT1G55250.1 (histone mono-ubiquitination 2 )

HSP 1 Score: 47.8 bits (112), Expect = 1.2e-05
Identity = 24/43 (55.81%), Postives = 31/43 (72.09%), Query Frame = 0


Query: 1   MASTLSKEMGMMESQLKRWKETTHEVVSVHEKVQALETLLVGK 44
           MASTLSKEM MME+QLKRWK+T  + + + E+ Q+L   L  K
Sbjct: 479 MASTLSKEMEMMEAQLKRWKDTAQDALYLREQAQSLRVSLSNK 521

[Close]

BLAST of Lag0000386 vs. TAIR 10
Match: AT1G55250.3 (histone mono-ubiquitination 2 )

HSP 1 Score: 46.2 bits (108), Expect = 3.5e-05
Identity = 22/36 (61.11%), Postives = 29/36 (80.56%), Query Frame = 0


Query: 1   MASTLSKEMGMMESQLKRWKETTHEVVSVHEKVQAL 37
           MASTLSKEM MME+QLKRWK+T  + + + E+ Q+L
Sbjct: 460 MASTLSKEMEMMEAQLKRWKDTAQDALYLREQAQSL 495

The following BLAST results are available for this feature:

BLAST of Lag0000386 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022137205.1	1.9e-16	61.18	ubiquitin-conjugating enzyme E2-23 kDa-like isoform X2 [Momordica charantia]	[more]
XP_022137204.1	1.9e-16	61.18	ubiquitin-conjugating enzyme E2-23 kDa-like isoform X1 [Momordica charantia]	[more]
XP_011651465.1	4.2e-16	60.00	ubiquitin-conjugating enzyme E2-23 kDa isoform X2 [Cucumis sativus]	[more]
XP_004152466.1	4.2e-16	60.00	ubiquitin-conjugating enzyme E2-23 kDa isoform X1 [Cucumis sativus] >XP_00843815...	[more]
XP_022954942.1	4.2e-16	61.18	ubiquitin-conjugating enzyme E2-23 kDa-like [Cucurbita moschata] >XP_022954943.1...	[more]

BLAST of Lag0000386 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42749	1.9e-16	52.94	Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana OX=3702 GN=UBC5 PE=2 S...	[more]
P42748	4.3e-16	51.76	Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana OX=3702 GN=UBC4 PE=2 S...	[more]
P16577	4.0e-14	64.15	Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum OX=4565 GN=UBC4 PE=1...	[more]
P42750	1.0e-12	64.15	Ubiquitin-conjugating enzyme E2 6 OS=Arabidopsis thaliana OX=3702 GN=UBC6 PE=2 S...	[more]
P28263	9.3e-11	41.18	Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharomyces cerevisiae (strain ATCC ...	[more]

BLAST of Lag0000386 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C6K5	9.0e-17	61.18	ubiquitin-conjugating enzyme E2-23 kDa-like isoform X1 OS=Momordica charantia OX...	[more]
A0A6J1C614	9.0e-17	61.18	ubiquitin-conjugating enzyme E2-23 kDa-like isoform X2 OS=Momordica charantia OX...	[more]
A0A6J1JWI6	2.0e-16	61.18	ubiquitin-conjugating enzyme E2-23 kDa-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A1S3AVD3	2.0e-16	60.00	ubiquitin-conjugating enzyme E2-23 kDa-like OS=Cucumis melo OX=3656 GN=LOC103483...	[more]
A0A6J1GUH1	2.0e-16	61.18	ubiquitin-conjugating enzyme E2-23 kDa-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]

BLAST of Lag0000386 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G63800.1	1.4e-17	52.94	ubiquitin-conjugating enzyme 5	[more]
AT5G41340.1	3.1e-17	51.76	ubiquitin conjugating enzyme 4	[more]
AT2G46030.1	7.1e-14	64.15	ubiquitin-conjugating enzyme 6	[more]
AT1G55250.1	1.2e-05	55.81	histone mono-ubiquitination 2	[more]
AT1G55250.3	3.5e-05	61.11	histone mono-ubiquitination 2	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 70..142 e-value: 3.1E-9 score: 36.6
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10	Ubiquitin Conjugating Enzyme	coord: 62..169 e-value: 1.8E-8 score: 36.2
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 70..117
None	No IPR available	PANTHER	PTHR24068:SF332	UBIQUITIN-CONJUGATING ENZYME E2-23 KDA-LIKE	coord: 65..152
None	No IPR available	PANTHER	PTHR24068	UBIQUITIN-CONJUGATING ENZYME E2	coord: 65..152

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0000386.1	Lag0000386.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0000166	nucleotide binding