Lag0000363 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0000363
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	C2 NT-type domain-containing protein
Location	chr4: 5103355 .. 5104088 (+)
RNA-Seq Expression	Lag0000363
Synteny	Lag0000363

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGCGGCAACAGTAATTCTCTATCAATCAATGCAACCTTCTAGCTTCCCTCTCAGACTCGAGTAGGGTAAGAATATCGCCTTCCCTGACTGGTCCCTTGACATTCCTCATGATGTAACGATTCTGATCATCAAGAAACTTGACTCTCACATGAGTCATCTTGATCCAGTTCTACCCATTCCTTTCACCACCACTGCAAGTTTGATTTGAGACTCCATTTTCCTGAGGAAGAAAATCGAAGACGTGCGGCAGTGGGAGAAGATCCAGAGGGGATTTGGAATTGTAAGCCGATTCGAGCTACTACTCATATTGGAATGCTGATGAGTTGCTTGTTCTCTGCTAAAGTCGTCCCTGTTCAGGGCCTTCCCGCCTCCATGAATGGGCTTCGACTTTCCGTTTGGATTTACGCTTTTGCTGTAGATTCTCAAGAGCTTGATTTCGGGAGAAGTCCAGTGGATTTGAGTAAAGTGATTGAAGAATCCATGGAGAAGAGTTACGAAGGAATGCGAGTTCAACAGTGGGACAGTAGCTTCAATCTGGCGGGAAAAGCCAAAGGAGAAGAACTAGTCGTCAAATTAGGTTTTCAGATTATGGAAAAAGACAGAGGAATTGGAATTTACAATCAAGCTCAGCCAAAGGAATCCACGTCGGGAAAATATTTCGGGGGAAAGCAATTGAAAACCTCCTTCAGTGTTCCTAGTCCCAAACTAACCAGTCAAAGTGAAGCTTGA

mRNA sequence

ATGATGGCGGCAACAGTAATTCTCTATCAATCAATGCAACCTTCTAGCTTCCCTCTCAGACTCGATTCTACCCATTCCTTTCACCACCACTGCAAGTTTGATTTGAGACTCCATTTTCCTGAGGAAGAAAATCGAAGACGTGCGGCAGTGGGAGAAGATCCAGAGGGGATTTGGAATTGTAAGCCGATTCGAGCTACTACTCATATTGGAATGCTGATGAGTTGCTTGTTCTCTGCTAAAGTCGTCCCTGTTCAGGGCCTTCCCGCCTCCATGAATGGGCTTCGACTTTCCGTTTGGATTTACGCTTTTGCTGTAGATTCTCAAGAGCTTGATTTCGGGAGAAGTCCAGTGGATTTGAGTAAAGTGATTGAAGAATCCATGGAGAAGAGTTACGAAGGAATGCGAGTTCAACAGTGGGACAGTAGCTTCAATCTGGCGGGAAAAGCCAAAGGAGAAGAACTAGTCGTCAAATTAGGTTTTCAGATTATGGAAAAAGACAGAGGAATTGGAATTTACAATCAAGCTCAGCCAAAGGAATCCACGTCGGGAAAATATTTCGGGGGAAAGCAATTGAAAACCTCCTTCAGTGTTCCTAGTCCCAAACTAACCAGTCAAAGTGAAGCTTGA

Coding sequence (CDS)

ATGATGGCGGCAACAGTAATTCTCTATCAATCAATGCAACCTTCTAGCTTCCCTCTCAGACTCGATTCTACCCATTCCTTTCACCACCACTGCAAGTTTGATTTGAGACTCCATTTTCCTGAGGAAGAAAATCGAAGACGTGCGGCAGTGGGAGAAGATCCAGAGGGGATTTGGAATTGTAAGCCGATTCGAGCTACTACTCATATTGGAATGCTGATGAGTTGCTTGTTCTCTGCTAAAGTCGTCCCTGTTCAGGGCCTTCCCGCCTCCATGAATGGGCTTCGACTTTCCGTTTGGATTTACGCTTTTGCTGTAGATTCTCAAGAGCTTGATTTCGGGAGAAGTCCAGTGGATTTGAGTAAAGTGATTGAAGAATCCATGGAGAAGAGTTACGAAGGAATGCGAGTTCAACAGTGGGACAGTAGCTTCAATCTGGCGGGAAAAGCCAAAGGAGAAGAACTAGTCGTCAAATTAGGTTTTCAGATTATGGAAAAAGACAGAGGAATTGGAATTTACAATCAAGCTCAGCCAAAGGAATCCACGTCGGGAAAATATTTCGGGGGAAAGCAATTGAAAACCTCCTTCAGTGTTCCTAGTCCCAAACTAACCAGTCAAAGTGAAGCTTGA

Protein sequence

MMAATVILYQSMQPSSFPLRLDSTHSFHHHCKFDLRLHFPEEENRRRAAVGEDPEGIWNCKPIRATTHIGMLMSCLFSAKVVPVQGLPASMNGLRLSVWIYAFAVDSQELDFGRSPVDLSKVIEESMEKSYEGMRVQQWDSSFNLAGKAKGEELVVKLGFQIMEKDRGIGIYNQAQPKESTSGKYFGGKQLKTSFSVPSPKLTSQSEA

Homology

[Close]

BLAST of Lag0000363 vs. NCBI nr
Match: XP_022135722.1 (protein PLASTID MOVEMENT IMPAIRED 1 [Momordica charantia])

HSP 1 Score: 235.3 bits (599), Expect = 4.6e-58
Identity = 134/227 (59.03%), Postives = 148/227 (65.20%), Query Frame = 0


Query: 36  RLHFPEEENRRRAAVGEDPEGIWNCKPIRATTHIGM-LMSCLFSAKVVPVQGLPASMNGL 95
           R+   + E R+      + +GIWN KPIRA +HIGM  MSCLFS +VV VQGLPASMNGL
Sbjct: 96  RVSSNQPEPRKMDETAPEKKGIWNWKPIRALSHIGMHKMSCLFSVEVVTVQGLPASMNGL 155

Query: 96  RLSV-----------------------------------------------------WIY 155
           RLSV                                                     WIY
Sbjct: 156 RLSVCVRKKETKDGAVNTMPSRVSQGAADFEETLFLKCHVYCTPGNGRPMKFQPRPFWIY 215

Query: 156 AFAVDSQELDFGRSPVDLSKVIEESMEKSYEGMRVQQWDSSFNLAGKAKGEELVVKLGFQ 209
           AFAVD+QELDFGRS VDLSK+IEESMEKSYEG RV+QWD+SFNLAGKA+G ELVVKLGFQ
Sbjct: 216 AFAVDAQELDFGRSSVDLSKLIEESMEKSYEGTRVRQWDTSFNLAGKARGGELVVKLGFQ 275

[Close]

BLAST of Lag0000363 vs. NCBI nr
Match: XP_038899778.1 (protein PLASTID MOVEMENT IMPAIRED 1 [Benincasa hispida])

HSP 1 Score: 233.4 bits (594), Expect = 1.8e-57
Identity = 135/227 (59.47%), Postives = 146/227 (64.32%), Query Frame = 0


Query: 36  RLHFPEEENRRRAAVGEDPEGIWNCKPIRATTHIGM-LMSCLFSAKVVPVQGLPASMNGL 95
           R+   + E R+      + +GIWN KPIRA THIGM  +SCLFS +VV VQGLPASMNGL
Sbjct: 165 RVSSSQPETRKLDEAAPEKKGIWNWKPIRALTHIGMQKISCLFSVEVVTVQGLPASMNGL 224

Query: 96  RLSV-----------------------------------------------------WIY 155
           RLSV                                                     WIY
Sbjct: 225 RLSVCVRKKETKDGAVNTMPSRVTQGAADFEETLFLKCHVYCTPGNGKPLKFEPRPFWIY 284

Query: 156 AFAVDSQELDFGRSPVDLSKVIEESMEKSYEGMRVQQWDSSFNLAGKAKGEELVVKLGFQ 209
           AFAVD+QELDFGRS VDLSK+IEESMEKSYEG RV+QWD SFNLAGKAKG ELVVKLGFQ
Sbjct: 285 AFAVDAQELDFGRSSVDLSKLIEESMEKSYEGTRVRQWDISFNLAGKAKGGELVVKLGFQ 344

[Close]

BLAST of Lag0000363 vs. NCBI nr
Match: XP_008453006.1 (PREDICTED: protein PLASTID MOVEMENT IMPAIRED 1 [Cucumis melo] >KAA0064661.1 protein PLASTID MOVEMENT IMPAIRED 1 [Cucumis melo var. makuwa] >TYK19930.1 protein PLASTID MOVEMENT IMPAIRED 1 [Cucumis melo var. makuwa])

HSP 1 Score: 231.1 bits (588), Expect = 8.7e-57
Identity = 135/227 (59.47%), Postives = 146/227 (64.32%), Query Frame = 0


Query: 36  RLHFPEEENRRRAAVGEDPEGIWNCKPIRATTHIGM-LMSCLFSAKVVPVQGLPASMNGL 95
           RL   + E R+      + +GIWN KPIRA THIGM  +SCLFS +VV VQGLPASMNGL
Sbjct: 98  RLSSSQPEPRKLDDATPEKKGIWNWKPIRALTHIGMQKVSCLFSVEVVTVQGLPASMNGL 157

Query: 96  RLSV-----------------------------------------------------WIY 155
           RLSV                                                     WIY
Sbjct: 158 RLSVCVRKKETKDGAVNTMPSRVSQGAADFEETLFLKCHVYCTPGNGKPLKFEPRPFWIY 217

Query: 156 AFAVDSQELDFGRSPVDLSKVIEESMEKSYEGMRVQQWDSSFNLAGKAKGEELVVKLGFQ 209
           AFAVD+QELDFGRSPVDLSK+IEES+EKSYEG RV+QWD SFNLAGKAKG ELVVKLGFQ
Sbjct: 218 AFAVDAQELDFGRSPVDLSKLIEESIEKSYEGTRVRQWDFSFNLAGKAKGGELVVKLGFQ 277

[Close]

BLAST of Lag0000363 vs. NCBI nr
Match: XP_004145603.1 (protein PLASTID MOVEMENT IMPAIRED 1 [Cucumis sativus] >KGN55529.1 hypothetical protein Csa_012224 [Cucumis sativus])

HSP 1 Score: 229.9 bits (585), Expect = 1.9e-56
Identity = 134/227 (59.03%), Postives = 145/227 (63.88%), Query Frame = 0


Query: 36  RLHFPEEENRRRAAVGEDPEGIWNCKPIRATTHIGM-LMSCLFSAKVVPVQGLPASMNGL 95
           RL   + E R+      + +GIWN KPIRA THIGM  MSCLFS +VV VQGLPASMNGL
Sbjct: 98  RLSSSQPEPRKLDDATPEKKGIWNWKPIRALTHIGMQKMSCLFSVEVVTVQGLPASMNGL 157

Query: 96  RLSV-----------------------------------------------------WIY 155
           RLSV                                                     WIY
Sbjct: 158 RLSVCVRKKETKDGAVNTMPSRVSQGAADFEETLFLKCHVYCTPGNGKPMKFEPRPFWIY 217

Query: 156 AFAVDSQELDFGRSPVDLSKVIEESMEKSYEGMRVQQWDSSFNLAGKAKGEELVVKLGFQ 209
           AFAVD+QELDFGRSPVDLSK+IEES+EKSYEG R++QWD SFNLAGKAK  ELVVKLGFQ
Sbjct: 218 AFAVDAQELDFGRSPVDLSKLIEESIEKSYEGTRIRQWDFSFNLAGKAKAGELVVKLGFQ 277

[Close]

BLAST of Lag0000363 vs. NCBI nr
Match: XP_023523906.1 (protein PLASTID MOVEMENT IMPAIRED 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 226.9 bits (577), Expect = 1.6e-55
Identity = 131/238 (55.04%), Postives = 149/238 (62.61%), Query Frame = 0


Query: 25  HSFHHHCKFDLRLHFPEEENRRRAAVGEDPEGIWNCKPIRATTHIGM-LMSCLFSAKVVP 84
           H  H+      ++   + E R+      + +GIWN KPIRA  HIGM  +SCLFS +VV 
Sbjct: 149 HDDHNSQSQPNKVSSNQPELRKLDEAAPEKKGIWNWKPIRALAHIGMQKISCLFSVEVVT 208

Query: 85  VQGLPASMNGLRLSV--------------------------------------------- 144
           VQGLPASMNGLRLSV                                             
Sbjct: 209 VQGLPASMNGLRLSVCVRKKETKDGAVNTMPSRVSQGAADFEETLFLKSHVYCTSGNGKP 268

Query: 145 --------WIYAFAVDSQELDFGRSPVDLSKVIEESMEKSYEGMRVQQWDSSFNLAGKAK 204
                   WIYAFAVD+QELDFGRSPVDLSK+IEESMEKS EG RV+QWD SFNLAGKAK
Sbjct: 269 LKFEPRPFWIYAFAVDAQELDFGRSPVDLSKLIEESMEKSSEGTRVRQWDISFNLAGKAK 328

Query: 205 GEELVVKLGFQIMEKDRGIGIYNQAQPKESTSGKYFGGKQLKTSFSVPSPKLTSQSEA 209
           G ELVVKLGFQIMEKD G+GIY+QAQPKES SGK +G KQ KTSFSVPSP+LT+Q+EA
Sbjct: 329 GGELVVKLGFQIMEKDGGVGIYSQAQPKESKSGKSYGRKQSKTSFSVPSPRLTAQTEA 386

[Close]

BLAST of Lag0000363 vs. ExPASy Swiss-Prot
Match: Q9C8E6 (Protein PLASTID MOVEMENT IMPAIRED 1 OS=Arabidopsis thaliana OX=3702 GN=PMI1 PE=1 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 3.8e-39
Identity = 102/231 (44.16%), Postives = 126/231 (54.55%), Query Frame = 0


Query: 42  EENRRRAAVGEDPEGIWNCKPIRATTHIGM-LMSCLFSAKVVPVQGLPASMNGLRLSVWI 101
           EE+   + V E+ +GIWN KPIR    IGM  +SCL S +VV  Q LPASMNGLRL V +
Sbjct: 107 EESSSGSGVKEEKKGIWNWKPIRGLVRIGMQKLSCLLSVEVVAAQNLPASMNGLRLGVCV 166

Query: 102 -------------------------------------------------------YAFAV 161
                                                                  Y FAV
Sbjct: 167 RKKETKDGAVQTMPCRVSQGSADFEETLFIKCHVYYSPANGKGSPAKFEARPFLFYLFAV 226

Query: 162 DSQELDFGRSPVDLSKVIEESMEK-SYEGMRVQQWDSSFNLAGKAKGEELVVKLGFQIME 209
           D++EL+FGR  VDLS++I+ES+EK +YEG RV+QWD ++ L+GKAKG EL +KLGFQIME
Sbjct: 227 DAKELEFGRHVVDLSELIQESVEKMNYEGARVRQWDMNWGLSGKAKGGELALKLGFQIME 286

[Close]

BLAST of Lag0000363 vs. ExPASy Swiss-Prot
Match: F4K5K6 (Protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1 OS=Arabidopsis thaliana OX=3702 GN=PMIR1 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.5e-06
Identity = 43/191 (22.51%), Postives = 74/191 (38.74%), Query Frame = 0


Query: 44  NRRRAAVGEDPEGIWNCKPIRATTHI-GMLMSCLFSAKVVPVQGLPASMNGLRLSV-W-- 103
           +R   A  ++ +  WN  P+RA  H+     +C FSA+V  ++GLP     L L+V W  
Sbjct: 48  SRSNLAEPKEKKSFWNW-PLRAINHVRNRRFNCCFSAQVHSIEGLPPIFQDLSLTVHWKR 107

Query: 104 ------------------------------------------------IYAFAVDSQELD 163
                                                           +Y   V S E+D
Sbjct: 108 RDESLSTRPAKVSNGRAEFKDKLTHTCSVYGSRSGPHHSAKYEAKHFLLYVSLVGSPEID 167

Query: 164 FGRSPVDLSKVIEESMEKSYEGMRVQQWDSSFNLAGKAKGEELVVKLGFQIMEKDRGIGI 183
            G+  +DL+K++  ++E+  +     +W ++F L+GKA G  L +  G+ ++   R    
Sbjct: 168 LGKHRMDLTKLLPLTLEELQDEKSSGKWSTTFQLSGKANGATLSMSFGYTVVGDTRNPAS 227

[Close]

BLAST of Lag0000363 vs. ExPASy TrEMBL
Match: A0A6J1C3J4 (protein PLASTID MOVEMENT IMPAIRED 1 OS=Momordica charantia OX=3673 GN=LOC111007612 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 2.2e-58
Identity = 134/227 (59.03%), Postives = 148/227 (65.20%), Query Frame = 0


Query: 36  RLHFPEEENRRRAAVGEDPEGIWNCKPIRATTHIGM-LMSCLFSAKVVPVQGLPASMNGL 95
           R+   + E R+      + +GIWN KPIRA +HIGM  MSCLFS +VV VQGLPASMNGL
Sbjct: 96  RVSSNQPEPRKMDETAPEKKGIWNWKPIRALSHIGMHKMSCLFSVEVVTVQGLPASMNGL 155

Query: 96  RLSV-----------------------------------------------------WIY 155
           RLSV                                                     WIY
Sbjct: 156 RLSVCVRKKETKDGAVNTMPSRVSQGAADFEETLFLKCHVYCTPGNGRPMKFQPRPFWIY 215

Query: 156 AFAVDSQELDFGRSPVDLSKVIEESMEKSYEGMRVQQWDSSFNLAGKAKGEELVVKLGFQ 209
           AFAVD+QELDFGRS VDLSK+IEESMEKSYEG RV+QWD+SFNLAGKA+G ELVVKLGFQ
Sbjct: 216 AFAVDAQELDFGRSSVDLSKLIEESMEKSYEGTRVRQWDTSFNLAGKARGGELVVKLGFQ 275

[Close]

BLAST of Lag0000363 vs. ExPASy TrEMBL
Match: A0A5D3D8X4 (Protein PLASTID MOVEMENT IMPAIRED 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00420 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 4.2e-57
Identity = 135/227 (59.47%), Postives = 146/227 (64.32%), Query Frame = 0


Query: 36  RLHFPEEENRRRAAVGEDPEGIWNCKPIRATTHIGM-LMSCLFSAKVVPVQGLPASMNGL 95
           RL   + E R+      + +GIWN KPIRA THIGM  +SCLFS +VV VQGLPASMNGL
Sbjct: 98  RLSSSQPEPRKLDDATPEKKGIWNWKPIRALTHIGMQKVSCLFSVEVVTVQGLPASMNGL 157

Query: 96  RLSV-----------------------------------------------------WIY 155
           RLSV                                                     WIY
Sbjct: 158 RLSVCVRKKETKDGAVNTMPSRVSQGAADFEETLFLKCHVYCTPGNGKPLKFEPRPFWIY 217

Query: 156 AFAVDSQELDFGRSPVDLSKVIEESMEKSYEGMRVQQWDSSFNLAGKAKGEELVVKLGFQ 209
           AFAVD+QELDFGRSPVDLSK+IEES+EKSYEG RV+QWD SFNLAGKAKG ELVVKLGFQ
Sbjct: 218 AFAVDAQELDFGRSPVDLSKLIEESIEKSYEGTRVRQWDFSFNLAGKAKGGELVVKLGFQ 277

[Close]

BLAST of Lag0000363 vs. ExPASy TrEMBL
Match: A0A1S3BV54 (protein PLASTID MOVEMENT IMPAIRED 1 OS=Cucumis melo OX=3656 GN=LOC103493839 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 4.2e-57
Identity = 135/227 (59.47%), Postives = 146/227 (64.32%), Query Frame = 0


Query: 36  RLHFPEEENRRRAAVGEDPEGIWNCKPIRATTHIGM-LMSCLFSAKVVPVQGLPASMNGL 95
           RL   + E R+      + +GIWN KPIRA THIGM  +SCLFS +VV VQGLPASMNGL
Sbjct: 98  RLSSSQPEPRKLDDATPEKKGIWNWKPIRALTHIGMQKVSCLFSVEVVTVQGLPASMNGL 157

Query: 96  RLSV-----------------------------------------------------WIY 155
           RLSV                                                     WIY
Sbjct: 158 RLSVCVRKKETKDGAVNTMPSRVSQGAADFEETLFLKCHVYCTPGNGKPLKFEPRPFWIY 217

Query: 156 AFAVDSQELDFGRSPVDLSKVIEESMEKSYEGMRVQQWDSSFNLAGKAKGEELVVKLGFQ 209
           AFAVD+QELDFGRSPVDLSK+IEES+EKSYEG RV+QWD SFNLAGKAKG ELVVKLGFQ
Sbjct: 218 AFAVDAQELDFGRSPVDLSKLIEESIEKSYEGTRVRQWDFSFNLAGKAKGGELVVKLGFQ 277

[Close]

BLAST of Lag0000363 vs. ExPASy TrEMBL
Match: A0A0A0L3F0 (C2 NT-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G664370 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 9.4e-57
Identity = 134/227 (59.03%), Postives = 145/227 (63.88%), Query Frame = 0


Query: 36  RLHFPEEENRRRAAVGEDPEGIWNCKPIRATTHIGM-LMSCLFSAKVVPVQGLPASMNGL 95
           RL   + E R+      + +GIWN KPIRA THIGM  MSCLFS +VV VQGLPASMNGL
Sbjct: 98  RLSSSQPEPRKLDDATPEKKGIWNWKPIRALTHIGMQKMSCLFSVEVVTVQGLPASMNGL 157

Query: 96  RLSV-----------------------------------------------------WIY 155
           RLSV                                                     WIY
Sbjct: 158 RLSVCVRKKETKDGAVNTMPSRVSQGAADFEETLFLKCHVYCTPGNGKPMKFEPRPFWIY 217

Query: 156 AFAVDSQELDFGRSPVDLSKVIEESMEKSYEGMRVQQWDSSFNLAGKAKGEELVVKLGFQ 209
           AFAVD+QELDFGRSPVDLSK+IEES+EKSYEG R++QWD SFNLAGKAK  ELVVKLGFQ
Sbjct: 218 AFAVDAQELDFGRSPVDLSKLIEESIEKSYEGTRIRQWDFSFNLAGKAKAGELVVKLGFQ 277

[Close]

BLAST of Lag0000363 vs. ExPASy TrEMBL
Match: A0A6J1FRG0 (protein PLASTID MOVEMENT IMPAIRED 1-like OS=Cucurbita moschata OX=3662 GN=LOC111446244 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 8.8e-55
Identity = 128/222 (57.66%), Postives = 143/222 (64.41%), Query Frame = 0


Query: 41  EEENRRRAAVGEDPEGIWNCKPIRATTHIGM-LMSCLFSAKVVPVQGLPASMNGLRLSV- 100
           + E R+      + +GIWN KPIRA  HIGM  +SCLFS +VV VQGLPASMNGLRLSV 
Sbjct: 101 QPELRKLDEATPEKKGIWNWKPIRALAHIGMQKISCLFSVEVVTVQGLPASMNGLRLSVC 160

Query: 101 ----------------------------------------------------WIYAFAVD 160
                                                               WIYAFAVD
Sbjct: 161 VRKKETKDGAVNTMPSRVSQGTADFEETLFLKSHVYCTSGNGKPLKFEPRPFWIYAFAVD 220

Query: 161 SQELDFGRSPVDLSKVIEESMEKSYEGMRVQQWDSSFNLAGKAKGEELVVKLGFQIMEKD 209
           +QELDFGRS VDLSK+IEESMEKS EG RV+QWD SFNLAGKAKG ELVVKLGFQIMEKD
Sbjct: 221 AQELDFGRSAVDLSKLIEESMEKSSEGTRVRQWDISFNLAGKAKGGELVVKLGFQIMEKD 280

[Close]

BLAST of Lag0000363 vs. TAIR 10
Match: AT1G42550.1 (plastid movement impaired1 )

HSP 1 Score: 162.9 bits (411), Expect = 2.7e-40
Identity = 102/231 (44.16%), Postives = 126/231 (54.55%), Query Frame = 0


Query: 42  EENRRRAAVGEDPEGIWNCKPIRATTHIGM-LMSCLFSAKVVPVQGLPASMNGLRLSVWI 101
           EE+   + V E+ +GIWN KPIR    IGM  +SCL S +VV  Q LPASMNGLRL V +
Sbjct: 107 EESSSGSGVKEEKKGIWNWKPIRGLVRIGMQKLSCLLSVEVVAAQNLPASMNGLRLGVCV 166

Query: 102 -------------------------------------------------------YAFAV 161
                                                                  Y FAV
Sbjct: 167 RKKETKDGAVQTMPCRVSQGSADFEETLFIKCHVYYSPANGKGSPAKFEARPFLFYLFAV 226

Query: 162 DSQELDFGRSPVDLSKVIEESMEK-SYEGMRVQQWDSSFNLAGKAKGEELVVKLGFQIME 209
           D++EL+FGR  VDLS++I+ES+EK +YEG RV+QWD ++ L+GKAKG EL +KLGFQIME
Sbjct: 227 DAKELEFGRHVVDLSELIQESVEKMNYEGARVRQWDMNWGLSGKAKGGELALKLGFQIME 286

[Close]

BLAST of Lag0000363 vs. TAIR 10
Match: AT5G20610.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26160.1); Has 918 Blast hits to 759 proteins in 180 species: Archae - 6; Bacteria - 105; Metazoa - 264; Fungi - 89; Plants - 167; Viruses - 5; Other Eukaryotes - 282 (source: NCBI BLink). )

HSP 1 Score: 53.9 bits (128), Expect = 1.8e-07
Identity = 43/191 (22.51%), Postives = 74/191 (38.74%), Query Frame = 0


Query: 44  NRRRAAVGEDPEGIWNCKPIRATTHI-GMLMSCLFSAKVVPVQGLPASMNGLRLSV-W-- 103
           +R   A  ++ +  WN  P+RA  H+     +C FSA+V  ++GLP     L L+V W  
Sbjct: 48  SRSNLAEPKEKKSFWNW-PLRAINHVRNRRFNCCFSAQVHSIEGLPPIFQDLSLTVHWKR 107

Query: 104 ------------------------------------------------IYAFAVDSQELD 163
                                                           +Y   V S E+D
Sbjct: 108 RDESLSTRPAKVSNGRAEFKDKLTHTCSVYGSRSGPHHSAKYEAKHFLLYVSLVGSPEID 167

Query: 164 FGRSPVDLSKVIEESMEKSYEGMRVQQWDSSFNLAGKAKGEELVVKLGFQIMEKDRGIGI 183
            G+  +DL+K++  ++E+  +     +W ++F L+GKA G  L +  G+ ++   R    
Sbjct: 168 LGKHRMDLTKLLPLTLEELQDEKSSGKWSTTFQLSGKANGATLSMSFGYTVVGDTRNPAS 227

The following BLAST results are available for this feature:

BLAST of Lag0000363 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135722.1	4.6e-58	59.03	protein PLASTID MOVEMENT IMPAIRED 1 [Momordica charantia]	[more]
XP_038899778.1	1.8e-57	59.47	protein PLASTID MOVEMENT IMPAIRED 1 [Benincasa hispida]	[more]
XP_008453006.1	8.7e-57	59.47	PREDICTED: protein PLASTID MOVEMENT IMPAIRED 1 [Cucumis melo] >KAA0064661.1 prot...	[more]
XP_004145603.1	1.9e-56	59.03	protein PLASTID MOVEMENT IMPAIRED 1 [Cucumis sativus] >KGN55529.1 hypothetical p...	[more]
XP_023523906.1	1.6e-55	55.04	protein PLASTID MOVEMENT IMPAIRED 1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lag0000363 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C8E6	3.8e-39	44.16	Protein PLASTID MOVEMENT IMPAIRED 1 OS=Arabidopsis thaliana OX=3702 GN=PMI1 PE=1...	[more]
F4K5K6	2.5e-06	22.51	Protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Lag0000363 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C3J4	2.2e-58	59.03	protein PLASTID MOVEMENT IMPAIRED 1 OS=Momordica charantia OX=3673 GN=LOC1110076...	[more]
A0A5D3D8X4	4.2e-57	59.47	Protein PLASTID MOVEMENT IMPAIRED 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3BV54	4.2e-57	59.47	protein PLASTID MOVEMENT IMPAIRED 1 OS=Cucumis melo OX=3656 GN=LOC103493839 PE=4...	[more]
A0A0A0L3F0	9.4e-57	59.03	C2 NT-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G664370 ...	[more]
A0A6J1FRG0	8.8e-55	57.66	protein PLASTID MOVEMENT IMPAIRED 1-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of Lag0000363 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G42550.1	2.7e-40	44.16	plastid movement impaired1	[more]
AT5G20610.1	1.8e-07	22.51	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 174..208
IPR039614	Protein PLASTID MOVEMENT IMPAIRED 1-like	PANTHER	PTHR33414	PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1	coord: 46..99
IPR039614	Protein PLASTID MOVEMENT IMPAIRED 1-like	PANTHER	PTHR33414	PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1	coord: 99..208
IPR033343	PLASTID MOVEMENT IMPAIRED1	PANTHER	PTHR33414:SF2	PROTEIN PLASTID MOVEMENT IMPAIRED 1	coord: 46..99
IPR033343	PLASTID MOVEMENT IMPAIRED1	PANTHER	PTHR33414:SF2	PROTEIN PLASTID MOVEMENT IMPAIRED 1	coord: 99..208

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0000363.1	Lag0000363.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009902	chloroplast relocation