Homology
BLAST of Lag0000342 vs. NCBI nr
Match:
KAA0039770.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK24727.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])
HSP 1 Score: 493.4 bits (1269), Expect = 2.6e-135
Identity = 252/524 (48.09%), Postives = 338/524 (64.50%), Query Frame = 0
Query: 2 QEIRMWKQRCKKTWLKEGDENTTFFHK--------------------------------- 61
+E ++W Q+ K+ W+ EGDENT+FFHK
Sbjct: 181 KEAQIWYQKSKRLWITEGDENTSFFHKICSARQRRSIISNINSVDGVPCSTNESIAKAFL 240
Query: 62 ---------GTTSEGWMVSNLNWCPISGPEATSLIQPFSELEVFQNLKAMGHNKSPGPDG 121
G W++ NLNW PIS +A +L F+E E+ + L A +NKSPGPDG
Sbjct: 241 DHFEDIYKGGGEESPWLIDNLNWSPISTNQAQNLCSMFTEEEIHEALTAFSNNKSPGPDG 300
Query: 122 FTVEFFKKSWIAIRPSVMEVFRDFFQKGIINCNVNETYITLIPKKNKAMQIQDFRPISLT 181
FT+EF+K +W ++ ++ +FRDF IIN VN T I LI KK K + D+RPISLT
Sbjct: 301 FTMEFYKSTWSVLKEEILNIFRDFHSNCIINKAVNITNIALIAKKEKCAEPADYRPISLT 360
Query: 182 TVLYRLIAKTLAERLKSTLQGTISENQLAFVKGRQITDAILVANEAIDFWKCSRTRGFVI 241
T +Y+LIAK +AERLK TL T++ENQ+AFVKGRQI DAILVANEAID+W+ + +GFVI
Sbjct: 361 TSIYKLIAKVIAERLKDTLPYTVAENQMAFVKGRQIIDAILVANEAIDYWRVKKIQGFVI 420
Query: 242 KLDIEKAFDKICWNFVDKILAFKGYPITW--------------------PKRKIKAERGI 301
KLDIEKAFDK+ W F+D +L KGYP W P+ KI+ RGI
Sbjct: 421 KLDIEKAFDKLNWRFIDFMLMKKGYPFKWRNWIRACISSVQYSIIINGRPRGKIQPSRGI 480
Query: 302 RQGDPISPFIFVLAMDYLSRILQSAEQKGLVKGCSL-NSVSVSHLLFADDILLFVQDNDA 361
RQGDPISPFIFVLAMDY+SR+L S +K +KG L +++++HLLFADDILLFV+D++
Sbjct: 481 RQGDPISPFIFVLAMDYMSRLLNSVGEK--IKGVKLEGNINLTHLLFADDILLFVEDDEH 540
Query: 362 MLGNLFNIIKVFELSSGLNINFSKSSITGINVEDSRVAQIAANWGCPTTQFPIPYLGSPL 421
+ NL NII +F+L+SGL+IN +KS+I+ INV+ SR QIA+ WG T PI YLG PL
Sbjct: 541 SIQNLKNIINLFQLASGLSINLNKSTISPINVDASRTEQIASQWGISTKFLPINYLGVPL 600
Query: 422 GGNPSSSSFWANTVDKIHRKLDSWRYSYISKGGRLTLIRATLSGIPNYLLSIFKAPQSVC 463
GG + +FW N +KI++KL SW+YS +SKGG++TLI+++L+ +P Y LSIFKAP S C
Sbjct: 601 GGKQITKTFWKNVEEKINKKLASWKYSMLSKGGKITLIKSSLASLPTYQLSIFKAPVSTC 660
BLAST of Lag0000342 vs. NCBI nr
Match:
KAA0041367.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])
HSP 1 Score: 493.0 bits (1268), Expect = 3.3e-135
Identity = 250/524 (47.71%), Postives = 339/524 (64.69%), Query Frame = 0
Query: 2 QEIRMWKQRCKKTWLKEGDENTTFFHK--------------------------------- 61
+E ++W Q+ K+ W+ EGDENT+FFHK
Sbjct: 5 KEAQIWYQKSKRLWITEGDENTSFFHKICTARQRRSIISNIKSVDGVPCSTNESIAKAFL 64
Query: 62 ---------GTTSEGWMVSNLNWCPISGPEATSLIQPFSELEVFQNLKAMGHNKSPGPDG 121
G W++ NL+W PIS +A +L F+E E+ L A +NKSPGPDG
Sbjct: 65 DHFEDIYKGGGEESPWLIDNLSWSPISTTQAQNLCSCFTEEEIHAALTAFSNNKSPGPDG 124
Query: 122 FTVEFFKKSWIAIRPSVMEVFRDFFQKGIINCNVNETYITLIPKKNKAMQIQDFRPISLT 181
FT+EF+K +W ++ ++ +FRDF IIN VN T I LI KK K + D+RPISLT
Sbjct: 125 FTMEFYKSTWSDLKEEILNIFRDFHSNCIINKAVNITNIALIAKKEKCAEPADYRPISLT 184
Query: 182 TVLYRLIAKTLAERLKSTLQGTISENQLAFVKGRQITDAILVANEAIDFWKCSRTRGFVI 241
T +Y+LIAK +AERLK TL T++ENQ+AFVKGRQI DAILVANEAID+W+ + +GFVI
Sbjct: 185 TSIYKLIAKVIAERLKETLPSTVAENQMAFVKGRQIIDAILVANEAIDYWRVKKIQGFVI 244
Query: 242 KLDIEKAFDKICWNFVDKILAFKGYPITW--------------------PKRKIKAERGI 301
KLDIEKAFDK+ W F+D +L KGYP W P+ KI+ RGI
Sbjct: 245 KLDIEKAFDKLNWRFIDFMLMKKGYPFRWRRWIRACISSVQYSIIINGRPRGKIQPSRGI 304
Query: 302 RQGDPISPFIFVLAMDYLSRILQSAEQKGLVKGCSL-NSVSVSHLLFADDILLFVQDNDA 361
RQGDPISPFIFVLAMDY+SR+L S +K +KG + +++++HLLFADDILLFV+D++
Sbjct: 305 RQGDPISPFIFVLAMDYISRLLNSVGEK--IKGVKMEGNINLTHLLFADDILLFVEDDEH 364
Query: 362 MLGNLFNIIKVFELSSGLNINFSKSSITGINVEDSRVAQIAANWGCPTTQFPIPYLGSPL 421
+ NL NII +F+L+SGL+IN +KS+I+ INV+ +R QIA+ WG T PI YLG PL
Sbjct: 365 SIQNLKNIINLFQLASGLSINLNKSTISPINVDAARTEQIASQWGISTKFLPINYLGVPL 424
Query: 422 GGNPSSSSFWANTVDKIHRKLDSWRYSYISKGGRLTLIRATLSGIPNYLLSIFKAPQSVC 463
GG ++ +FW N +KI++KL SW+YS +SKGG++TLI+++L+ +P Y LSIFKAP S C
Sbjct: 425 GGKQTTKTFWKNVEEKINKKLASWKYSMLSKGGKITLIKSSLASLPTYQLSIFKAPVSAC 484
BLAST of Lag0000342 vs. NCBI nr
Match:
XP_016902461.1 (PREDICTED: LINE-1 retrotransposable element ORF2 protein [Cucumis melo])
HSP 1 Score: 491.9 bits (1265), Expect = 7.4e-135
Identity = 251/524 (47.90%), Postives = 337/524 (64.31%), Query Frame = 0
Query: 2 QEIRMWKQRCKKTWLKEGDENTTFFHK--------------------------------- 61
+E ++W Q+ K+ W+ EGDENT+FFHK
Sbjct: 181 KEAQIWYQKSKRLWITEGDENTSFFHKICSARQRRSIISNINSVDGVPCSTNESIAKAFL 240
Query: 62 ---------GTTSEGWMVSNLNWCPISGPEATSLIQPFSELEVFQNLKAMGHNKSPGPDG 121
G W++ NLNW PIS +A +L F+E E+ + L A +NKSPGPDG
Sbjct: 241 DHFEDIYKGGGEESPWLIDNLNWSPISTNQAQNLCSMFTEEEIHEALTAFSNNKSPGPDG 300
Query: 122 FTVEFFKKSWIAIRPSVMEVFRDFFQKGIINCNVNETYITLIPKKNKAMQIQDFRPISLT 181
FT+EF+K +W ++ ++ +FRDF IIN VN T I LI KK K + D+RPISLT
Sbjct: 301 FTMEFYKSTWSVLKEEILNIFRDFHSNCIINKAVNITNIALIAKKEKCAEPADYRPISLT 360
Query: 182 TVLYRLIAKTLAERLKSTLQGTISENQLAFVKGRQITDAILVANEAIDFWKCSRTRGFVI 241
T +Y+LIAK +AERLK TL T++ENQ+AFVKGRQI DAILVANEAID+W+ + +GFVI
Sbjct: 361 TSIYKLIAKVIAERLKDTLPYTVAENQMAFVKGRQIIDAILVANEAIDYWRVKKIQGFVI 420
Query: 242 KLDIEKAFDKICWNFVDKILAFKGYPITW--------------------PKRKIKAERGI 301
KLDIEKAFDK+ W F+D +L KGYP W P+ KI+ RGI
Sbjct: 421 KLDIEKAFDKLNWRFIDFMLMKKGYPFKWRNWIRACISSVQYSIIINGRPRGKIQPSRGI 480
Query: 302 RQGDPISPFIFVLAMDYLSRILQSAEQKGLVKGCSL-NSVSVSHLLFADDILLFVQDNDA 361
RQGDPISPFIFVLAMDY+SR+L S +K +KG L +++++HLLFADDILLFV+D++
Sbjct: 481 RQGDPISPFIFVLAMDYMSRLLNSVGEK--IKGVKLEGNINLTHLLFADDILLFVEDDEH 540
Query: 362 MLGNLFNIIKVFELSSGLNINFSKSSITGINVEDSRVAQIAANWGCPTTQFPIPYLGSPL 421
+ NL NII +F+L+SGL+IN +KS+I+ INV+ SR QIA+ WG T PI YLG PL
Sbjct: 541 SIQNLKNIINLFQLASGLSINLNKSTISPINVDASRTEQIASQWGISTKFLPINYLGVPL 600
Query: 422 GGNPSSSSFWANTVDKIHRKLDSWRYSYISKGGRLTLIRATLSGIPNYLLSIFKAPQSVC 463
GG + +FW N +KI++KL SW+YS +SKGG++TLI+++L+ +P Y LSIFK P S C
Sbjct: 601 GGKQITKTFWKNVEEKINKKLASWKYSMLSKGGKITLIKSSLASLPTYQLSIFKVPVSTC 660
BLAST of Lag0000342 vs. NCBI nr
Match:
KAA0046762.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])
HSP 1 Score: 489.6 bits (1259), Expect = 3.7e-134
Identity = 241/524 (45.99%), Postives = 330/524 (62.98%), Query Frame = 0
Query: 1 MQEIRMWKQRCKKTWLKEGDENTTFFHK-------------------------------- 60
++E + W QR KK WL+EGDEN++FFH+
Sbjct: 180 LKESQFWYQRAKKLWLREGDENSSFFHRICTARQKRNFIQEIQDEEGLIQNSNDSISSAF 239
Query: 61 ----------GTTSEGWMVSNLNWCPISGPEATSLIQPFSELEVFQNLKAMGHNKSPGPD 120
T S+ + + NL W PI E +L PF E E+ + ++ K+PGPD
Sbjct: 240 IKFFSRIFRGPTKSDPFFIDNLEWNPIEHSEGLNLCAPFLEDEIKGVINSLDGKKTPGPD 299
Query: 121 GFTVEFFKKSWIAIRPSVMEVFRDFFQKGIINCNVNETYITLIPKKNKAMQIQDFRPISL 180
GF + FFK W ++ +M++F+DF+ KG+IN N+N TYI LIPKK +DFRPISL
Sbjct: 300 GFPISFFKSYWYLLKEDIMDIFKDFYDKGVINKNMNNTYIALIPKKKDFSNPKDFRPISL 359
Query: 181 TTVLYRLIAKTLAERLKSTLQGTISENQLAFVKGRQITDAILVANEAIDFWKCSRTRGFV 240
TT +Y++IAKTL+ RLK++L TISENQLAFVK RQITDAIL+ANEA+DFWK + +GF+
Sbjct: 360 TTSIYKIIAKTLSNRLKTSLPNTISENQLAFVKNRQITDAILMANEAVDFWKVKKIKGFI 419
Query: 241 IKLDIEKAFDKICWNFVDKILAFKGYPITW--------------------PKRKIKAERG 300
+KLDIEKAFD + W+F+D +L K +PI W P+ +IKA RG
Sbjct: 420 LKLDIEKAFDNLNWDFIDFVLEKKNFPILWRKWIRGCISNVTYSIIVNGRPQGRIKANRG 479
Query: 301 IRQGDPISPFIFVLAMDYLSRILQSAEQKGLVKGCSLNS-VSVSHLLFADDILLFVQDND 360
+RQGDP+SPF+FV+AMDYLSR+L E G +KG S +S ++SH+LFADDILLF++DND
Sbjct: 480 LRQGDPLSPFLFVIAMDYLSRLLSHLEITGAIKGVSFSSNCNISHILFADDILLFIEDND 539
Query: 361 AMLGNLFNIIKVFELSSGLNINFSKSSITGINVEDSRVAQIAANWGCPTTQFPIPYLGSP 420
L NL + +FE +SGL IN KS++ +NV + R + A+ WG + P+ YLG P
Sbjct: 540 FFLNNLRMALSLFERASGLKINLLKSALVPMNVSEIRAKECASFWGISSQSLPLSYLGVP 599
Query: 421 LGGNPSSSSFWANTVDKIHRKLDSWRYSYISKGGRLTLIRATLSGIPNYLLSIFKAPQSV 462
LGGNP S FW+N +KI +KL++W+Y+ ISKGGRLTLI++TLS +P Y LS+F+AP
Sbjct: 600 LGGNPKSRLFWSNVEEKIQKKLNNWKYAQISKGGRLTLIKSTLSSLPTYQLSVFQAPSLT 659
BLAST of Lag0000342 vs. NCBI nr
Match:
KAA0037445.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK01919.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])
HSP 1 Score: 483.8 bits (1244), Expect = 2.0e-132
Identity = 243/524 (46.37%), Postives = 326/524 (62.21%), Query Frame = 0
Query: 1 MQEIRMWKQRCKKTWLKEGDENTTFFHK-------------------------------- 60
++E + W QR KK WL+EGDEN++FFH+
Sbjct: 180 LKESQFWYQRAKKLWLREGDENSSFFHRICSSRQKRSFIHEIQDEEGLIQNTNNGISTAF 239
Query: 61 ----------GTTSEGWMVSNLNWCPISGPEATSLIQPFSELEVFQNLKAMGHNKSPGPD 120
T S+ + NL+W PI E L PF E E+ + ++ K+PGPD
Sbjct: 240 IKFFSRIYRSSTKSDPLFIDNLDWNPIEHSEWPHLCAPFLEGEIKGVINSLDGKKTPGPD 299
Query: 121 GFTVEFFKKSWIAIRPSVMEVFRDFFQKGIINCNVNETYITLIPKKNKAMQIQDFRPISL 180
GF + FFK W ++ +M++F+DF+ KG+IN N+N TYI LIPKK +DFRPISL
Sbjct: 300 GFPISFFKSYWYLLKEDIMDIFKDFYDKGVINKNMNNTYIALIPKKKNYSHPKDFRPISL 359
Query: 181 TTVLYRLIAKTLAERLKSTLQGTISENQLAFVKGRQITDAILVANEAIDFWKCSRTRGFV 240
TT +Y++IAKTL+ RLK+ L TIS NQLAFVK RQITDAIL+ANEA+DFWK + +GF+
Sbjct: 360 TTSIYKIIAKTLSNRLKTALPDTISGNQLAFVKNRQITDAILMANEALDFWKVKKIKGFI 419
Query: 241 IKLDIEKAFDKICWNFVDKILAFKGYPITW--------------------PKRKIKAERG 300
+KLDIEKAFD + W+F+D +L K +P W P+ +IKA RG
Sbjct: 420 LKLDIEKAFDNLNWDFIDFVLEKKNFPNLWRKWIRGCISNVTYSVIVNGRPQGRIKANRG 479
Query: 301 IRQGDPISPFIFVLAMDYLSRILQSAEQKGLVKGCSLNS-VSVSHLLFADDILLFVQDND 360
+RQGDP+SPF+FV+AMDYLSR+L E G +KG SLNS ++SH+LFADDILLF++DND
Sbjct: 480 LRQGDPLSPFLFVIAMDYLSRLLSHLESSGAIKGVSLNSNCNISHILFADDILLFIEDND 539
Query: 361 AMLGNLFNIIKVFELSSGLNINFSKSSITGINVEDSRVAQIAANWGCPTTQFPIPYLGSP 420
L NL + +FE +SGL IN KS++ +NV +R + A+ WG P+ YLG P
Sbjct: 540 YFLKNLRMALSLFEKASGLKINLLKSALVPVNVSVNRAKECASFWGISCHSLPLSYLGVP 599
Query: 421 LGGNPSSSSFWANTVDKIHRKLDSWRYSYISKGGRLTLIRATLSGIPNYLLSIFKAPQSV 462
LGGNP S+ FW N DKI +KL++W+Y+ ISKGGRLTLI++TLS +P Y LS+F+ P
Sbjct: 600 LGGNPKSNLFWRNVEDKIQKKLNNWKYAQISKGGRLTLIKSTLSSLPIYQLSVFQDPSLT 659
BLAST of Lag0000342 vs. ExPASy Swiss-Prot
Match:
O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1)
HSP 1 Score: 141.7 bits (356), Expect = 2.5e-32
Identity = 108/409 (26.41%), Postives = 190/409 (46.45%), Query Frame = 0
Query: 49 EATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFRDFFQKGI 108
E SL +P + E+ + ++ KSPGPDGFT EF+++ + P ++++F+ ++GI
Sbjct: 445 EVESLNRPITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEKEGI 504
Query: 109 INCNVNETYITLIPKKNK-AMQIQDFRPISLTTVLYRLIAKTLAERLKSTLQGTISENQL 168
+ + E I LIPK + + ++FRPISL + +++ K LA R++ ++ I +Q+
Sbjct: 505 LPNSFYEASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILANRIQQHIKKLIHHDQV 564
Query: 169 AFVKGRQITDAILVANEAIDFWKCSRTRGFV-IKLDIEKAFDKICWNFVDKILAFKGYPI 228
F+ G Q I + I ++ + V I +D EKAFDKI F+ K L G
Sbjct: 565 GFIPGMQGWFNIRKSINVIQHINRAKDKNHVIISIDAEKAFDKIQQPFMLKTLNKLGIDG 624
Query: 229 TWPK-----------------RKIKA---ERGIRQGDPISPFIFVLAMDYLSRILQSAEQ 288
+ K +K++A + G RQG P+SP +F + ++ L+R ++ ++
Sbjct: 625 MYLKIIRAIYDKPTANIILNGQKLEAFPLKTGTRQGCPLSPLLFNIVLEVLARAIRQEKE 684
Query: 289 KGLVKGCSLNSVSVSHLLFADDILLFVQDNDAMLGNLFNIIKVFELSSGLNINFSKSSIT 348
+KG L V LFADD+++++++ NL +I F SG IN KS
Sbjct: 685 ---IKGIQLGKEEVKLSLFADDMIVYLENPIVSAQNLLKLISNFSKVSGYKINVQKSQAF 744
Query: 349 GINVEDSRVAQIAANWGCPTTQFPIPYLGSPLGGNPSS--SSFWANTVDKIHRKLDSWRY 408
N +QI I YLG L + + + +I + W+
Sbjct: 745 LYNNNRQTESQIMGELPFTIASKRIKYLGIQLTRDVKDLFKENYKPLLKEIKEDTNKWKN 804
Query: 409 SYISKGGRLTLIRATLSGIPNYLLSI--FKAPQSVCFSIDKIIRSFLWH 432
S GR+ +++ + Y + K P + ++K F+W+
Sbjct: 805 IPCSWVGRINIVKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWN 850
BLAST of Lag0000342 vs. ExPASy Swiss-Prot
Match:
P08548 (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1)
HSP 1 Score: 139.4 bits (350), Expect = 1.2e-31
Identity = 110/415 (26.51%), Postives = 191/415 (46.02%), Query Frame = 0
Query: 45 ISGPEATSLIQPFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFRDFF 104
+S E L +P S E+ ++ + KSPGPDGFT EF++ + P ++ +F++
Sbjct: 440 LSQKEVEMLNRPISSSEIASTIQNLPKKKSPGPDGFTSEFYQTFKEELVPILLNLFQNIE 499
Query: 105 QKGIINCNVNETYITLIPKKNK-AMQIQDFRPISLTTVLYRLIAKTLAERLKSTLQGTIS 164
++GI+ E ITLIPK K + +++RPISL + +++ K L R++ ++ I
Sbjct: 500 KEGILPNTFYEANITLIPKPGKDPTRKENYRPISLMNIDAKILNKILTNRIQQHIKKIIH 559
Query: 165 ENQLAFVKGRQITDAILVANEAID-FWKCSRTRGFVIKLDIEKAFDKICWNFVDKILAFK 224
+Q+ F+ G Q I + I K ++ +D EKAFD I F+ + L
Sbjct: 560 HDQVGFIPGSQGWFNIRKSINVIQHINKLKNKDHMILSIDAEKAFDNIQHPFMIRTLKKI 619
Query: 225 GYPITWPK--------------------RKIKAERGIRQGDPISPFIFVLAMDYLSRILQ 284
G T+ K + G RQG P+SP +F + M+ L+ ++
Sbjct: 620 GIEGTFLKLIEAIYSKPTANIILNGVKLKSFPLRSGTRQGCPLSPLLFNIVMEVLAIAIR 679
Query: 285 SAEQKGLVKGCSLNSVSVSHLLFADDILLFVQDNDAMLGNLFNIIKVFELSSGLNINFSK 344
E+K +KG + S + LFADD+++++++ L +IK + SG IN K
Sbjct: 680 --EEKA-IKGIHIGSEEIKLSLFADDMIVYLENTRDSTTKLLEVIKEYSNVSGYKINTHK 739
Query: 345 SSITGINVEDSRVAQIAANWGCPTTQFP--IPYLGSPLGGNPSS--SSFWANTVDKIHRK 404
S ++ A+ P T P + YLG L + + +I
Sbjct: 740 S--VAFIYTNNNQAEKTVKDSIPFTVVPKKMKYLGVYLTKDVKDLYKENYETLRKEIAED 799
Query: 405 LDSWRYSYISKGGRLTLIRATL--SGIPNYLLSIFKAPQSVCFSIDKIIRSFLWH 432
++ W+ S GR+ +++ ++ I N+ KAP S ++KII F+W+
Sbjct: 800 VNKWKNIPCSWLGRINIVKMSILPKAIYNFNAIPIKAPLSYFKDLEKIILHFIWN 849
BLAST of Lag0000342 vs. ExPASy Swiss-Prot
Match:
P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1)
HSP 1 Score: 132.9 bits (333), Expect = 1.1e-29
Identity = 120/417 (28.78%), Postives = 191/417 (45.80%), Query Frame = 0
Query: 56 PFSELEVFQNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFRDFFQKGIINCNVNE 115
P + E+ Q L+ M HNKSPG DG T+EFF+ W + P V + F+KG + +
Sbjct: 448 PITLDELSQALRLMPHNKSPGLDGLTIEFFQFFWDTLGPDFHRVLTEAFKKGELPLSCRR 507
Query: 116 TYITLIPKKNKAMQIQDFRPISLTTVLYRLIAKTLAERLKSTLQGTISENQLAFVKGRQI 175
++L+PKK I+++RP+SL + Y+++AK ++ RLKS L I +Q V GR I
Sbjct: 508 AVLSLLPKKGDLRLIKNWRPVSLLSTDYKIVAKAISLRLKSVLAEVIHPDQSYTVPGRTI 567
Query: 176 TDAILVANEAIDFWKCSRTRGFVIKLDIEKAFDKICWNFVDKIL-------AFKGY---- 235
D + + + + F + + + LD EKAFD++ ++ L F GY
Sbjct: 568 FDNVFLIRDLLHFARRTGLSLAFLSLDQEKAFDRVDHQYLIGTLQAYSFGPQFVGYLKTM 627
Query: 236 --------PITWP-KRKIKAERGIRQGDPISPFIFVLAMDYLSRILQSAEQKGLVKGCSL 295
I W + RG+RQG P+S ++ LA++ +L+ ++K +
Sbjct: 628 YASAECLVKINWSLTAPLAFGRGVRQGCPLSGQLYSLAIEPFLCLLRKRLTGLVLKEPDM 687
Query: 296 NSVSVSHLLFADDILLFVQDNDAMLGNLFNIIKVFELSSGLNINFSKSS--ITG-INVED 355
V + +ADD++L QD L +V+ +S IN+SKSS + G + V+
Sbjct: 688 RVVLSA---YADDVILVAQDL-VDLERAQECQEVYAAASSARINWSKSSGLLEGSLKVDF 747
Query: 356 SRVAQIAANWGCPTTQFPIPYLGSPLGGN--PSSSSFWANTVDKIHRKLDSWR--YSYIS 415
A +W I YLG L P S +F + + +L W+ +S
Sbjct: 748 LPPAFRDISWESKI----IKYLGVYLSAEEYPVSQNF-IELEECVLTRLGKWKGFAKVLS 807
Query: 416 KGGRLTLIRATLSGIPNYLLSIFKAPQSVCFSIDKIIRSFLWHG-HDQS---SSIPL 442
GR +I ++ Y L Q I + + FLW G H S SS+PL
Sbjct: 808 MRGRALVINQLVASQIWYRLICLSPTQEFIAKIQRRLLDFLWIGKHWVSAGVSSLPL 855
BLAST of Lag0000342 vs. ExPASy Swiss-Prot
Match:
P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2)
HSP 1 Score: 131.7 bits (330), Expect = 2.6e-29
Identity = 117/454 (25.77%), Postives = 193/454 (42.51%), Query Frame = 0
Query: 4 IRMWKQRCKKTWLKEGDENTTFFHKGTTSEGWMVSNLNWCPISGPEATSLIQPFSELEVF 63
IR + +R T L+ DE F + + V LN + L P S E+
Sbjct: 418 IRSFYKRLYSTKLENLDEMDKFLDR------YQVPKLN-----QDQVDHLNSPISPKEIE 477
Query: 64 QNLKAMGHNKSPGPDGFTVEFFKKSWIAIRPSVMEVFRDFFQKGIINCNVNETYITLIPK 123
+ ++ KSPGPDGF+ EF++ + P + ++F +G + + E ITLIPK
Sbjct: 478 AVINSLPTKKSPGPDGFSAEFYQTFKEDLIPILHKLFHKIEVEGTLPNSFYEATITLIPK 537
Query: 124 KNK-AMQIQDFRPISLTTVLYRLIAKTLAERLKSTLQGTISENQLAFVKGRQITDAILVA 183
K +I++FRPISL + +++ K LA R++ ++ I +Q+ F+ G Q I +
Sbjct: 538 PQKDPTKIENFRPISLMNIDAKILNKILANRIQEHIKAIIHPDQVGFIPGMQGWFNIRKS 597
Query: 184 NEAIDFW-KCSRTRGFVIKLDIEKAFDKICWNFVDKILAFKG------------YPITWP 243
I + K +I LD EKAFDKI F+ K+L G Y
Sbjct: 598 INVIHYINKLKDKNHMIISLDAEKAFDKIQHPFMIKVLERSGIQGPYLNMIKAIYSKPVA 657
Query: 244 KRKIKAER--------GIRQGDPISPFIFVLAMDYLSRILQSAEQKGLVKGCSLNSVSVS 303
K+ E+ G RQG P+SP++F + ++ L+R ++ ++ +KG + V
Sbjct: 658 NIKVNGEKLEAIPLKSGTRQGCPLSPYLFNIVLEVLARAIRQQKE---IKGIQIGKEEVK 717
Query: 304 HLLFADDILLFVQDNDAMLGNLFNIIKVFELSSGLNINFSKSSITGINVEDSRVAQIAAN 363
L ADD+++++ D L N+I F G IN +KS +I
Sbjct: 718 ISLLADDMIVYISDPKNSTRELLNLINSFGEVVGYKINSNKSMAFLYTKNKQAEKEIRET 777
Query: 364 WGCPTTQFPIPYLGSPLGGNPSS--SSFWANTVDKIHRKLDSWRYSYISKGGRLTLIRAT 423
I YLG L + + +I L W+ S GR+ +++
Sbjct: 778 TPFSIVTNNIKYLGVTLTKEVKDLYDKNFKSLKKEIKEDLRRWKDLPCSWIGRINIVKMA 837
Query: 424 L--SGIPNYLLSIFKAPQSVCFSIDKIIRSFLWH 432
+ I + K P ++ I F+W+
Sbjct: 838 ILPKAIYRFNAIPIKIPTQFFNELEGAICKFVWN 857
BLAST of Lag0000342 vs. ExPASy Swiss-Prot
Match:
Q03274 (Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) OS=Popillia japonica OX=7064 PE=4 SV=1)
HSP 1 Score: 89.4 bits (220), Expect = 1.5e-16
Identity = 77/275 (28.00%), Postives = 129/275 (46.91%), Query Frame = 0
Query: 74 SPGPDGFTVEFFKKSWIAIRPSVMEVFRDFFQKGIINCNVNETY----ITLIPKKNKAMQ 133
+PG DG TV+ ++ + R+F Q ++ +V + TLIPK
Sbjct: 22 APGSDGLTVQAITRTRLP---------RNFVQLHLLRGHVPTPWTAMRTTLIPKDGDLEN 81
Query: 134 IQDFRPISLTTVLYRLIAKTLAERLKSTLQGTISENQLAFVKGRQITDAILVANEAIDFW 193
++RPI++ + L RL+ + LA+RL++ ++ ++ A + G + +L + I
Sbjct: 82 PSNWRPITIASALQRLLHRILAKRLEAAVELHPAQKGYARIDGTLVNSLLL--DTYISSR 141
Query: 194 KCSRTRGFVIKLDIEKAFDKICWNFVDKILAFKGYP------ITW--------------- 253
+ R V+ LD+ KAFD + + + + L G IT
Sbjct: 142 REQRKTYNVVSLDVRKAFDTVSHSSICRALQRLGIDEGTSNYITGSLSDSTTTIRVGPGS 201
Query: 254 PKRKIKAERGIRQGDPISPFIFVLAMDYLSRILQSAEQKGLVKGCSLNSVSVSHLLFADD 313
RKI RG++QGDP+SPF+F +D L LQS G+ G ++ + L FADD
Sbjct: 202 QTRKICIRRGVKQGDPLSPFLFNAVLDELLCSLQST--PGI--GGTIGEEKIPVLAFADD 261
Query: 314 ILLFVQDNDAMLGNLFNIIKVFELSSGLNINFSKS 324
+LL ++DND +L + F G+++N KS
Sbjct: 262 LLL-LEDNDVLLPTTLATVANFFRLRGMSLNAKKS 280
BLAST of Lag0000342 vs. ExPASy TrEMBL
Match:
A0A5D3DM72 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002870 PE=4 SV=1)
HSP 1 Score: 493.4 bits (1269), Expect = 1.2e-135
Identity = 252/524 (48.09%), Postives = 338/524 (64.50%), Query Frame = 0
Query: 2 QEIRMWKQRCKKTWLKEGDENTTFFHK--------------------------------- 61
+E ++W Q+ K+ W+ EGDENT+FFHK
Sbjct: 181 KEAQIWYQKSKRLWITEGDENTSFFHKICSARQRRSIISNINSVDGVPCSTNESIAKAFL 240
Query: 62 ---------GTTSEGWMVSNLNWCPISGPEATSLIQPFSELEVFQNLKAMGHNKSPGPDG 121
G W++ NLNW PIS +A +L F+E E+ + L A +NKSPGPDG
Sbjct: 241 DHFEDIYKGGGEESPWLIDNLNWSPISTNQAQNLCSMFTEEEIHEALTAFSNNKSPGPDG 300
Query: 122 FTVEFFKKSWIAIRPSVMEVFRDFFQKGIINCNVNETYITLIPKKNKAMQIQDFRPISLT 181
FT+EF+K +W ++ ++ +FRDF IIN VN T I LI KK K + D+RPISLT
Sbjct: 301 FTMEFYKSTWSVLKEEILNIFRDFHSNCIINKAVNITNIALIAKKEKCAEPADYRPISLT 360
Query: 182 TVLYRLIAKTLAERLKSTLQGTISENQLAFVKGRQITDAILVANEAIDFWKCSRTRGFVI 241
T +Y+LIAK +AERLK TL T++ENQ+AFVKGRQI DAILVANEAID+W+ + +GFVI
Sbjct: 361 TSIYKLIAKVIAERLKDTLPYTVAENQMAFVKGRQIIDAILVANEAIDYWRVKKIQGFVI 420
Query: 242 KLDIEKAFDKICWNFVDKILAFKGYPITW--------------------PKRKIKAERGI 301
KLDIEKAFDK+ W F+D +L KGYP W P+ KI+ RGI
Sbjct: 421 KLDIEKAFDKLNWRFIDFMLMKKGYPFKWRNWIRACISSVQYSIIINGRPRGKIQPSRGI 480
Query: 302 RQGDPISPFIFVLAMDYLSRILQSAEQKGLVKGCSL-NSVSVSHLLFADDILLFVQDNDA 361
RQGDPISPFIFVLAMDY+SR+L S +K +KG L +++++HLLFADDILLFV+D++
Sbjct: 481 RQGDPISPFIFVLAMDYMSRLLNSVGEK--IKGVKLEGNINLTHLLFADDILLFVEDDEH 540
Query: 362 MLGNLFNIIKVFELSSGLNINFSKSSITGINVEDSRVAQIAANWGCPTTQFPIPYLGSPL 421
+ NL NII +F+L+SGL+IN +KS+I+ INV+ SR QIA+ WG T PI YLG PL
Sbjct: 541 SIQNLKNIINLFQLASGLSINLNKSTISPINVDASRTEQIASQWGISTKFLPINYLGVPL 600
Query: 422 GGNPSSSSFWANTVDKIHRKLDSWRYSYISKGGRLTLIRATLSGIPNYLLSIFKAPQSVC 463
GG + +FW N +KI++KL SW+YS +SKGG++TLI+++L+ +P Y LSIFKAP S C
Sbjct: 601 GGKQITKTFWKNVEEKINKKLASWKYSMLSKGGKITLIKSSLASLPTYQLSIFKAPVSTC 660
BLAST of Lag0000342 vs. ExPASy TrEMBL
Match:
A0A5A7TI93 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold206G00120 PE=4 SV=1)
HSP 1 Score: 493.0 bits (1268), Expect = 1.6e-135
Identity = 250/524 (47.71%), Postives = 339/524 (64.69%), Query Frame = 0
Query: 2 QEIRMWKQRCKKTWLKEGDENTTFFHK--------------------------------- 61
+E ++W Q+ K+ W+ EGDENT+FFHK
Sbjct: 5 KEAQIWYQKSKRLWITEGDENTSFFHKICTARQRRSIISNIKSVDGVPCSTNESIAKAFL 64
Query: 62 ---------GTTSEGWMVSNLNWCPISGPEATSLIQPFSELEVFQNLKAMGHNKSPGPDG 121
G W++ NL+W PIS +A +L F+E E+ L A +NKSPGPDG
Sbjct: 65 DHFEDIYKGGGEESPWLIDNLSWSPISTTQAQNLCSCFTEEEIHAALTAFSNNKSPGPDG 124
Query: 122 FTVEFFKKSWIAIRPSVMEVFRDFFQKGIINCNVNETYITLIPKKNKAMQIQDFRPISLT 181
FT+EF+K +W ++ ++ +FRDF IIN VN T I LI KK K + D+RPISLT
Sbjct: 125 FTMEFYKSTWSDLKEEILNIFRDFHSNCIINKAVNITNIALIAKKEKCAEPADYRPISLT 184
Query: 182 TVLYRLIAKTLAERLKSTLQGTISENQLAFVKGRQITDAILVANEAIDFWKCSRTRGFVI 241
T +Y+LIAK +AERLK TL T++ENQ+AFVKGRQI DAILVANEAID+W+ + +GFVI
Sbjct: 185 TSIYKLIAKVIAERLKETLPSTVAENQMAFVKGRQIIDAILVANEAIDYWRVKKIQGFVI 244
Query: 242 KLDIEKAFDKICWNFVDKILAFKGYPITW--------------------PKRKIKAERGI 301
KLDIEKAFDK+ W F+D +L KGYP W P+ KI+ RGI
Sbjct: 245 KLDIEKAFDKLNWRFIDFMLMKKGYPFRWRRWIRACISSVQYSIIINGRPRGKIQPSRGI 304
Query: 302 RQGDPISPFIFVLAMDYLSRILQSAEQKGLVKGCSL-NSVSVSHLLFADDILLFVQDNDA 361
RQGDPISPFIFVLAMDY+SR+L S +K +KG + +++++HLLFADDILLFV+D++
Sbjct: 305 RQGDPISPFIFVLAMDYISRLLNSVGEK--IKGVKMEGNINLTHLLFADDILLFVEDDEH 364
Query: 362 MLGNLFNIIKVFELSSGLNINFSKSSITGINVEDSRVAQIAANWGCPTTQFPIPYLGSPL 421
+ NL NII +F+L+SGL+IN +KS+I+ INV+ +R QIA+ WG T PI YLG PL
Sbjct: 365 SIQNLKNIINLFQLASGLSINLNKSTISPINVDAARTEQIASQWGISTKFLPINYLGVPL 424
Query: 422 GGNPSSSSFWANTVDKIHRKLDSWRYSYISKGGRLTLIRATLSGIPNYLLSIFKAPQSVC 463
GG ++ +FW N +KI++KL SW+YS +SKGG++TLI+++L+ +P Y LSIFKAP S C
Sbjct: 425 GGKQTTKTFWKNVEEKINKKLASWKYSMLSKGGKITLIKSSLASLPTYQLSIFKAPVSAC 484
BLAST of Lag0000342 vs. ExPASy TrEMBL
Match:
A0A1S4E2K5 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo OX=3656 GN=LOC107991687 PE=4 SV=1)
HSP 1 Score: 491.9 bits (1265), Expect = 3.6e-135
Identity = 251/524 (47.90%), Postives = 337/524 (64.31%), Query Frame = 0
Query: 2 QEIRMWKQRCKKTWLKEGDENTTFFHK--------------------------------- 61
+E ++W Q+ K+ W+ EGDENT+FFHK
Sbjct: 181 KEAQIWYQKSKRLWITEGDENTSFFHKICSARQRRSIISNINSVDGVPCSTNESIAKAFL 240
Query: 62 ---------GTTSEGWMVSNLNWCPISGPEATSLIQPFSELEVFQNLKAMGHNKSPGPDG 121
G W++ NLNW PIS +A +L F+E E+ + L A +NKSPGPDG
Sbjct: 241 DHFEDIYKGGGEESPWLIDNLNWSPISTNQAQNLCSMFTEEEIHEALTAFSNNKSPGPDG 300
Query: 122 FTVEFFKKSWIAIRPSVMEVFRDFFQKGIINCNVNETYITLIPKKNKAMQIQDFRPISLT 181
FT+EF+K +W ++ ++ +FRDF IIN VN T I LI KK K + D+RPISLT
Sbjct: 301 FTMEFYKSTWSVLKEEILNIFRDFHSNCIINKAVNITNIALIAKKEKCAEPADYRPISLT 360
Query: 182 TVLYRLIAKTLAERLKSTLQGTISENQLAFVKGRQITDAILVANEAIDFWKCSRTRGFVI 241
T +Y+LIAK +AERLK TL T++ENQ+AFVKGRQI DAILVANEAID+W+ + +GFVI
Sbjct: 361 TSIYKLIAKVIAERLKDTLPYTVAENQMAFVKGRQIIDAILVANEAIDYWRVKKIQGFVI 420
Query: 242 KLDIEKAFDKICWNFVDKILAFKGYPITW--------------------PKRKIKAERGI 301
KLDIEKAFDK+ W F+D +L KGYP W P+ KI+ RGI
Sbjct: 421 KLDIEKAFDKLNWRFIDFMLMKKGYPFKWRNWIRACISSVQYSIIINGRPRGKIQPSRGI 480
Query: 302 RQGDPISPFIFVLAMDYLSRILQSAEQKGLVKGCSL-NSVSVSHLLFADDILLFVQDNDA 361
RQGDPISPFIFVLAMDY+SR+L S +K +KG L +++++HLLFADDILLFV+D++
Sbjct: 481 RQGDPISPFIFVLAMDYMSRLLNSVGEK--IKGVKLEGNINLTHLLFADDILLFVEDDEH 540
Query: 362 MLGNLFNIIKVFELSSGLNINFSKSSITGINVEDSRVAQIAANWGCPTTQFPIPYLGSPL 421
+ NL NII +F+L+SGL+IN +KS+I+ INV+ SR QIA+ WG T PI YLG PL
Sbjct: 541 SIQNLKNIINLFQLASGLSINLNKSTISPINVDASRTEQIASQWGISTKFLPINYLGVPL 600
Query: 422 GGNPSSSSFWANTVDKIHRKLDSWRYSYISKGGRLTLIRATLSGIPNYLLSIFKAPQSVC 463
GG + +FW N +KI++KL SW+YS +SKGG++TLI+++L+ +P Y LSIFK P S C
Sbjct: 601 GGKQITKTFWKNVEEKINKKLASWKYSMLSKGGKITLIKSSLASLPTYQLSIFKVPVSTC 660
BLAST of Lag0000342 vs. ExPASy TrEMBL
Match:
A0A5A7TTK1 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold216G00450 PE=4 SV=1)
HSP 1 Score: 489.6 bits (1259), Expect = 1.8e-134
Identity = 241/524 (45.99%), Postives = 330/524 (62.98%), Query Frame = 0
Query: 1 MQEIRMWKQRCKKTWLKEGDENTTFFHK-------------------------------- 60
++E + W QR KK WL+EGDEN++FFH+
Sbjct: 180 LKESQFWYQRAKKLWLREGDENSSFFHRICTARQKRNFIQEIQDEEGLIQNSNDSISSAF 239
Query: 61 ----------GTTSEGWMVSNLNWCPISGPEATSLIQPFSELEVFQNLKAMGHNKSPGPD 120
T S+ + + NL W PI E +L PF E E+ + ++ K+PGPD
Sbjct: 240 IKFFSRIFRGPTKSDPFFIDNLEWNPIEHSEGLNLCAPFLEDEIKGVINSLDGKKTPGPD 299
Query: 121 GFTVEFFKKSWIAIRPSVMEVFRDFFQKGIINCNVNETYITLIPKKNKAMQIQDFRPISL 180
GF + FFK W ++ +M++F+DF+ KG+IN N+N TYI LIPKK +DFRPISL
Sbjct: 300 GFPISFFKSYWYLLKEDIMDIFKDFYDKGVINKNMNNTYIALIPKKKDFSNPKDFRPISL 359
Query: 181 TTVLYRLIAKTLAERLKSTLQGTISENQLAFVKGRQITDAILVANEAIDFWKCSRTRGFV 240
TT +Y++IAKTL+ RLK++L TISENQLAFVK RQITDAIL+ANEA+DFWK + +GF+
Sbjct: 360 TTSIYKIIAKTLSNRLKTSLPNTISENQLAFVKNRQITDAILMANEAVDFWKVKKIKGFI 419
Query: 241 IKLDIEKAFDKICWNFVDKILAFKGYPITW--------------------PKRKIKAERG 300
+KLDIEKAFD + W+F+D +L K +PI W P+ +IKA RG
Sbjct: 420 LKLDIEKAFDNLNWDFIDFVLEKKNFPILWRKWIRGCISNVTYSIIVNGRPQGRIKANRG 479
Query: 301 IRQGDPISPFIFVLAMDYLSRILQSAEQKGLVKGCSLNS-VSVSHLLFADDILLFVQDND 360
+RQGDP+SPF+FV+AMDYLSR+L E G +KG S +S ++SH+LFADDILLF++DND
Sbjct: 480 LRQGDPLSPFLFVIAMDYLSRLLSHLEITGAIKGVSFSSNCNISHILFADDILLFIEDND 539
Query: 361 AMLGNLFNIIKVFELSSGLNINFSKSSITGINVEDSRVAQIAANWGCPTTQFPIPYLGSP 420
L NL + +FE +SGL IN KS++ +NV + R + A+ WG + P+ YLG P
Sbjct: 540 FFLNNLRMALSLFERASGLKINLLKSALVPMNVSEIRAKECASFWGISSQSLPLSYLGVP 599
Query: 421 LGGNPSSSSFWANTVDKIHRKLDSWRYSYISKGGRLTLIRATLSGIPNYLLSIFKAPQSV 462
LGGNP S FW+N +KI +KL++W+Y+ ISKGGRLTLI++TLS +P Y LS+F+AP
Sbjct: 600 LGGNPKSRLFWSNVEEKIQKKLNNWKYAQISKGGRLTLIKSTLSSLPTYQLSVFQAPSLT 659
BLAST of Lag0000342 vs. ExPASy TrEMBL
Match:
A0A5D3BUZ3 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold808G00050 PE=4 SV=1)
HSP 1 Score: 483.8 bits (1244), Expect = 9.8e-133
Identity = 243/524 (46.37%), Postives = 326/524 (62.21%), Query Frame = 0
Query: 1 MQEIRMWKQRCKKTWLKEGDENTTFFHK-------------------------------- 60
++E + W QR KK WL+EGDEN++FFH+
Sbjct: 180 LKESQFWYQRAKKLWLREGDENSSFFHRICSSRQKRSFIHEIQDEEGLIQNTNNGISTAF 239
Query: 61 ----------GTTSEGWMVSNLNWCPISGPEATSLIQPFSELEVFQNLKAMGHNKSPGPD 120
T S+ + NL+W PI E L PF E E+ + ++ K+PGPD
Sbjct: 240 IKFFSRIYRSSTKSDPLFIDNLDWNPIEHSEWPHLCAPFLEGEIKGVINSLDGKKTPGPD 299
Query: 121 GFTVEFFKKSWIAIRPSVMEVFRDFFQKGIINCNVNETYITLIPKKNKAMQIQDFRPISL 180
GF + FFK W ++ +M++F+DF+ KG+IN N+N TYI LIPKK +DFRPISL
Sbjct: 300 GFPISFFKSYWYLLKEDIMDIFKDFYDKGVINKNMNNTYIALIPKKKNYSHPKDFRPISL 359
Query: 181 TTVLYRLIAKTLAERLKSTLQGTISENQLAFVKGRQITDAILVANEAIDFWKCSRTRGFV 240
TT +Y++IAKTL+ RLK+ L TIS NQLAFVK RQITDAIL+ANEA+DFWK + +GF+
Sbjct: 360 TTSIYKIIAKTLSNRLKTALPDTISGNQLAFVKNRQITDAILMANEALDFWKVKKIKGFI 419
Query: 241 IKLDIEKAFDKICWNFVDKILAFKGYPITW--------------------PKRKIKAERG 300
+KLDIEKAFD + W+F+D +L K +P W P+ +IKA RG
Sbjct: 420 LKLDIEKAFDNLNWDFIDFVLEKKNFPNLWRKWIRGCISNVTYSVIVNGRPQGRIKANRG 479
Query: 301 IRQGDPISPFIFVLAMDYLSRILQSAEQKGLVKGCSLNS-VSVSHLLFADDILLFVQDND 360
+RQGDP+SPF+FV+AMDYLSR+L E G +KG SLNS ++SH+LFADDILLF++DND
Sbjct: 480 LRQGDPLSPFLFVIAMDYLSRLLSHLESSGAIKGVSLNSNCNISHILFADDILLFIEDND 539
Query: 361 AMLGNLFNIIKVFELSSGLNINFSKSSITGINVEDSRVAQIAANWGCPTTQFPIPYLGSP 420
L NL + +FE +SGL IN KS++ +NV +R + A+ WG P+ YLG P
Sbjct: 540 YFLKNLRMALSLFEKASGLKINLLKSALVPVNVSVNRAKECASFWGISCHSLPLSYLGVP 599
Query: 421 LGGNPSSSSFWANTVDKIHRKLDSWRYSYISKGGRLTLIRATLSGIPNYLLSIFKAPQSV 462
LGGNP S+ FW N DKI +KL++W+Y+ ISKGGRLTLI++TLS +P Y LS+F+ P
Sbjct: 600 LGGNPKSNLFWRNVEDKIQKKLNNWKYAQISKGGRLTLIKSTLSSLPIYQLSVFQDPSLT 659
BLAST of Lag0000342 vs. TAIR 10
Match:
AT1G43760.1 (DNAse I-like superfamily protein )
HSP 1 Score: 84.3 bits (207), Expect = 3.3e-16
Identity = 56/186 (30.11%), Postives = 86/186 (46.24%), Query Frame = 0
Query: 7 WKQRCKKTWLKEGDENTTFFHKGTTS-------------EGWMVSNLN---------WCP 66
++Q+ + WL++GD NT FFHK + + V N+ +
Sbjct: 435 YRQKSRIKWLQDGDANTRFFHKVILANQAKNLIKFLRMDDDVRVENVTQVKEMIVAYYTH 494
Query: 67 ISGPEATSL----------IQPF--------------SELEVFQNLKAMGHNKSPGPDGF 126
+ G ++ L I PF S+ E+ + AM NK+PGPD F
Sbjct: 495 LLGSDSDILTPDSVQRIKDIHPFRCNDTLASRLSALPSDKEITAAVFAMPRNKAPGPDSF 554
Query: 127 TVEFFKKSWIAIRPSVMEVFRDFFQKGIINCNVNETYITLIPKKNKAMQIQDFRPISLTT 147
T EFF +SW ++ S + ++FF+ G + N T ITLIPK Q+ FRP+S T
Sbjct: 555 TAEFFWESWFVVKDSTIAAVKEFFRTGHLLKRFNATAITLIPKVTGVDQLSMFRPVSCCT 614
BLAST of Lag0000342 vs. TAIR 10
Match:
ATMG01250.1 (RNA-directed DNA polymerase (reverse transcriptase) )
HSP 1 Score: 60.8 bits (146), Expect = 3.9e-09
Identity = 27/62 (43.55%), Postives = 43/62 (69.35%), Query Frame = 0
Query: 229 PKRKIKAERGIRQGDPISPFIFVLAMDYLSRILQSAEQKGLVKG--CSLNSVSVSHLLFA 288
P+ + RG+RQGDP+SP++F+L + LS + + A+++G + G S NS ++HLLFA
Sbjct: 18 PQGLVTPSRGLRQGDPLSPYLFILCTEVLSGLCRRAQEQGRLPGIRVSNNSPRINHLLFA 77
BLAST of Lag0000342 vs. TAIR 10
Match:
AT4G20520.1 (RNA binding;RNA-directed DNA polymerases )
HSP 1 Score: 60.1 bits (144), Expect = 6.7e-09
Identity = 32/99 (32.32%), Postives = 53/99 (53.54%), Query Frame = 0
Query: 150 LAERLKSTLQGTISENQLAFVKGRQITDAILVANEAIDFWKCSRTRG----FVIKLDIEK 209
+ ERLK + I Q +F+ GR TD I+ EA+ + R +G ++KLD+EK
Sbjct: 1 MVERLKPLMTNLIGPAQASFIPGRVSTDNIVFVQEAVHSMR--RKKGVKGWMLLKLDLEK 60
Query: 210 AFDKICWNFVDKILAFKGYPITWPKRKIKAERGIRQGDP 245
A+D+I W++++ L G+P W ++ G R+ P
Sbjct: 61 AYDRIRWDYLEDTLISAGFPEVWLPEIARSTFGARRVAP 97
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0039770.1 | 2.6e-135 | 48.09 | LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK247... | [more] |
KAA0041367.1 | 3.3e-135 | 47.71 | LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | [more] |
XP_016902461.1 | 7.4e-135 | 47.90 | PREDICTED: LINE-1 retrotransposable element ORF2 protein [Cucumis melo] | [more] |
KAA0046762.1 | 3.7e-134 | 45.99 | LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | [more] |
KAA0037445.1 | 2.0e-132 | 46.37 | LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK019... | [more] |
Match Name | E-value | Identity | Description | |
O00370 | 2.5e-32 | 26.41 | LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1 | [more] |
P08548 | 1.2e-31 | 26.51 | LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1 | [more] |
P14381 | 1.1e-29 | 28.78 | Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV... | [more] |
P11369 | 2.6e-29 | 25.77 | LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE... | [more] |
Q03274 | 1.5e-16 | 28.00 | Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fra... | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3DM72 | 1.2e-135 | 48.09 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... | [more] |
A0A5A7TI93 | 1.6e-135 | 47.71 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... | [more] |
A0A1S4E2K5 | 3.6e-135 | 47.90 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo OX=3656 GN=LOC1079... | [more] |
A0A5A7TTK1 | 1.8e-134 | 45.99 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... | [more] |
A0A5D3BUZ3 | 9.8e-133 | 46.37 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... | [more] |