Lag0000325 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0000325
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Unknown protein
Location	chr4: 4050694 .. 4051107 (-)
RNA-Seq Expression	Lag0000325
Synteny	Lag0000325

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGCACTTCTCACCGGAGCTGGTCTGGCGGGTGCACTAACAATTTTTGACACTGAGCAGTTGATTCAATGTTTTAATAATATAAGTGAGGAATGTTGCAATAACTTGACGGCGCCATCACCATGCTACCTTTGGTACGTCACAAATCATTTCTTACCTACTGACTATGGCATAAATTACGCTCGCTTTATAGCGATTGCTGATGATTGTGGCATCACCCGTCCACCTCAGAACAATTGTACGGAGCGGTTCATTCAATGTTCCTATCAAGAACCACCAAGTGAGGAATGTTGCAATAACGCGAAGGGGCTACCACCACCACCAATATTCTATTATGTAAAGTTTGCATTCTATAGAGTGCTTGCTAAAGCTTGTGGCATCCGCTATGCATCTGTGAACGATTGGTCGTAG

mRNA sequence

ATGGTGGCACTTCTCACCGGAGCTGGTCTGGCGGGTGCACTAACAATTTTTGACACTGAGCAGTTGATTCAATGTTTTAATAATATAAGTGAGGAATGTTGCAATAACTTGACGGCGCCATCACCATGCTACCTTTGGTACGTCACAAATCATTTCTTACCTACTGACTATGGCATAAATTACGCTCGCTTTATAGCGATTGCTGATGATTGTGGCATCACCCGTCCACCTCAGAACAATTGTACGGAGCGGTTCATTCAATGTTCCTATCAAGAACCACCAAGTGAGGAATGTTGCAATAACGCGAAGGGGCTACCACCACCACCAATATTCTATTATGTAAAGTTTGCATTCTATAGAGTGCTTGCTAAAGCTTGTGGCATCCGCTATGCATCTGTGAACGATTGGTCGTAG

Coding sequence (CDS)

ATGGTGGCACTTCTCACCGGAGCTGGTCTGGCGGGTGCACTAACAATTTTTGACACTGAGCAGTTGATTCAATGTTTTAATAATATAAGTGAGGAATGTTGCAATAACTTGACGGCGCCATCACCATGCTACCTTTGGTACGTCACAAATCATTTCTTACCTACTGACTATGGCATAAATTACGCTCGCTTTATAGCGATTGCTGATGATTGTGGCATCACCCGTCCACCTCAGAACAATTGTACGGAGCGGTTCATTCAATGTTCCTATCAAGAACCACCAAGTGAGGAATGTTGCAATAACGCGAAGGGGCTACCACCACCACCAATATTCTATTATGTAAAGTTTGCATTCTATAGAGTGCTTGCTAAAGCTTGTGGCATCCGCTATGCATCTGTGAACGATTGGTCGTAG

Protein sequence

MVALLTGAGLAGALTIFDTEQLIQCFNNISEECCNNLTAPSPCYLWYVTNHFLPTDYGINYARFIAIADDCGITRPPQNNCTERFIQCSYQEPPSEECCNNAKGLPPPPIFYYVKFAFYRVLAKACGIRYASVNDWS

Homology

The following BLAST results are available for this feature:

BLAST of Lag0000325 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0000325 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 28..81 e-value: 1.0E-4 score: 22.3
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 21..77

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0000325.1	Lag0000325.1	mRNA