Lag0000188 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCCTCATCTCTCTCACTTCCTTCCACGCTTCATACACTCTCTTCTTCTACTCTGCGAACACATCCTAAGATTTCCTTTCCGCTTCACTCTCTGTCGCTTCCATCGAAGCCCTCTTCTTTCTCCCTCAGCTTCTCCCAGATTTTTTCTGGGTTACATCCCACCAAGAAGCCGCTCGGTTCTACAGCTATTGCCTCCGCTACTGATATGGCGTTGGAGAAGAGGGTTTTCGATTCTGGGGAGGATTTGGTTGTTTCTCTAGCAAAATACACCGCCGATTTGTCGGATCACTTTGCTAAGAACAGGGGTGCTTTCACTGTGGTTCTCTCCGGTGGATCTCTCATCAAATGCCTCAGGTTTCACTCCGTCATCTCACTTGTTATTCTATTGGGTTTTTGAGTTTCTTGTGTAATTTCCTGATGACTAGACTAGGTTCGTCAAATGAGCAATTGGGCCTATCGACTTCAATTTCAGGACTGTCTTTGGTTTCATCGAGATGCAAACTACTTTAACTTTAAGTGGAAAACTATTTTACTTCTGAACTAGGTTGGGCAAAACAGGGCAATCTTTTATTGTTGTAGTAATGGGATCAAACATGTGGCTTCTTGAGGTGCTCCAGCTTTTGTTTCTGATAGGCTAGAAACCAGTTACTTGGAATTTAGGGACGATGCTTTGATATTCAACACGGGCCTTTGATCTTTTAGGACTTTGCAATTTGCCTTTGAGATGCAATGTGAAATTGTTGGCATAACTTTCATTGCTTATGAGATATCTCAAATTTCAGGAAATTGGTGGAGCCACCATATGTTGATTCAATAGATTGGTCGAAATGGCACGTGTTTTGGGCTGATGAGAGAGTTGTACCCAAGGATCACGTTGACAGCAACTACAAACTTGCTTTTGATGGATTTCTCTCGCAGGTCGTAACTAGATGTTATATATATATATATATATATTCAAAATGGTGGCATGTCATTTTAATTCATGTTCTTTAGAGTTCATTTATGCCTTCTCATAAAAGACCACACGATTGTTTGCGAGCTGTTTAGGAAAACAACTTTTTTATGCTTTTTAAAATAGAACTTTGGTGAAATGAAAATATGTTTATGGAATTCTTTGTAAAATGTGTTTCTTTCTTCTTATTTCCTCTTAGTTTGGTTTCATGTGTGATCTATAGTAAGAACAACTGTCTGCAAAATCACTCAACAATAAAATCACTCAACTTCTGTTCTTAAAAACATTTTTTTTTTCCGAATAAAAGCAGACAGCTAATCTGCAAAAGGGTACCCGTATAACTGTGAAACTGCGTCTGTAG ATGGCTTCCTCATCTCTCTCACTTCCTTCCACGCTTCATACACTCTCTTCTTCTACTCTGCGAACACATCCTAAGATTTCCTTTCCGCTTCACTCTCTGTCGCTTCCATCGAAGCCCTCTTCTTTCTCCCTCAGCTTCTCCCAGATTTTTTCTGGGTTACATCCCACCAAGAAGCCGCTCGGTTCTACAGCTATTGCCTCCGCTACTGATATGGCGTTGGAGAAGAGGGTTTTCGATTCTGGGGAGGATTTGGTTGTTTCTCTAGCAAAATACACCGCCGATTTGTCGGATCACTTTGCTAAGAACAGGGGTGCTTTCACTGTGGTTCTCTCCGGTGGATCTCTCATCAAATGCCTCAGGAAATTGGTGGAGCCACCATATGTTGATTCAATAGATTGGTCGAAATGGCACGTGTTTTGGGCTGATGAGAGAGTTGTACCCAAGGATCACGTTGACAGCAACTACAAACTTGCTTTTGATGGATTTCTCTCGCAGACAGCTAATCTGCAAAAGGGTACCCGTATAACTGTGAAACTGCGTCTGTAG ATGGCTTCCTCATCTCTCTCACTTCCTTCCACGCTTCATACACTCTCTTCTTCTACTCTGCGAACACATCCTAAGATTTCCTTTCCGCTTCACTCTCTGTCGCTTCCATCGAAGCCCTCTTCTTTCTCCCTCAGCTTCTCCCAGATTTTTTCTGGGTTACATCCCACCAAGAAGCCGCTCGGTTCTACAGCTATTGCCTCCGCTACTGATATGGCGTTGGAGAAGAGGGTTTTCGATTCTGGGGAGGATTTGGTTGTTTCTCTAGCAAAATACACCGCCGATTTGTCGGATCACTTTGCTAAGAACAGGGGTGCTTTCACTGTGGTTCTCTCCGGTGGATCTCTCATCAAATGCCTCAGGAAATTGGTGGAGCCACCATATGTTGATTCAATAGATTGGTCGAAATGGCACGTGTTTTGGGCTGATGAGAGAGTTGTACCCAAGGATCACGTTGACAGCAACTACAAACTTGCTTTTGATGGATTTCTCTCGCAGACAGCTAATCTGCAAAAGGGTACCCGTATAACTGTGAAACTGCGTCTGTAG MASSSLSLPSTLHTLSSSTLRTHPKISFPLHSLSLPSKPSSFSLSFSQIFSGLHPTKKPLGSTAIASATDMALEKRVFDSGEDLVVSLAKYTADLSDHFAKNRGAFTVVLSGGSLIKCLRKLVEPPYVDSIDWSKWHVFWADERVVPKDHVDSNYKLAFDGFLSQTANLQKGTRITVKLRL Homology
BLAST of Lag0000188 vs. NCBI nr
Match: XP_038875648.1 (probable 6-phosphogluconolactonase 4, chloroplastic [Benincasa hispida]) HSP 1 Score: 266.5 bits (680), Expect = 1.6e-67 Identity = 140/168 (83.33%), Postives = 146/168 (86.90%), Query Frame = 0
BLAST of Lag0000188 vs. NCBI nr
Match: XP_022922138.1 (probable 6-phosphogluconolactonase 4, chloroplastic [Cucurbita moschata]) HSP 1 Score: 265.0 bits (676), Expect = 4.7e-67 Identity = 142/168 (84.52%), Postives = 147/168 (87.50%), Query Frame = 0
BLAST of Lag0000188 vs. NCBI nr
Match: XP_022974335.1 (probable 6-phosphogluconolactonase 4, chloroplastic [Cucurbita maxima]) HSP 1 Score: 263.5 bits (672), Expect = 1.4e-66 Identity = 141/168 (83.93%), Postives = 147/168 (87.50%), Query Frame = 0
BLAST of Lag0000188 vs. NCBI nr
Match: KAG6579303.1 (putative 6-phosphogluconolactonase 4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 260.8 bits (665), Expect = 8.9e-66 Identity = 141/168 (83.93%), Postives = 146/168 (86.90%), Query Frame = 0
BLAST of Lag0000188 vs. NCBI nr
Match: XP_023551362.1 (probable 6-phosphogluconolactonase 4, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 258.8 bits (660), Expect = 3.4e-65 Identity = 138/168 (82.14%), Postives = 146/168 (86.90%), Query Frame = 0
BLAST of Lag0000188 vs. ExPASy Swiss-Prot
Match: A2Z3C4 (Probable 6-phosphogluconolactonase 4, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=OsI_031067 PE=3 SV=2) HSP 1 Score: 152.5 bits (384), Expect = 4.5e-36 Identity = 92/174 (52.87%), Postives = 108/174 (62.07%), Query Frame = 0
BLAST of Lag0000188 vs. ExPASy Swiss-Prot
Match: Q69NG5 (Probable 6-phosphogluconolactonase 4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0529100 PE=2 SV=2) HSP 1 Score: 151.4 bits (381), Expect = 1.0e-35 Identity = 92/174 (52.87%), Postives = 108/174 (62.07%), Query Frame = 0
BLAST of Lag0000188 vs. ExPASy Swiss-Prot
Match: Q84WW2 (6-phosphogluconolactonase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PGL3 PE=1 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 1.9e-34 Identity = 91/174 (52.30%), Postives = 112/174 (64.37%), Query Frame = 0
BLAST of Lag0000188 vs. ExPASy Swiss-Prot
Match: Q8LG70 (Probable 6-phosphogluconolactonase 2 OS=Arabidopsis thaliana OX=3702 GN=PGL2 PE=2 SV=2) HSP 1 Score: 137.9 bits (346), Expect = 1.1e-31 Identity = 61/93 (65.59%), Postives = 73/93 (78.49%), Query Frame = 0
BLAST of Lag0000188 vs. ExPASy Swiss-Prot
Match: A2YXS5 (Probable 6-phosphogluconolactonase 3, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=OsI_30141 PE=3 SV=2) HSP 1 Score: 133.7 bits (335), Expect = 2.2e-30 Identity = 85/172 (49.42%), Postives = 105/172 (61.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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