
Lag0000181 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCCGTTTCTTCCTTCTCTCCCTATCTCTCTCTCTCTGCTGTAATCACGCCGGGCGTCAGCACACACGACTGCGCGACTTTCTTCTACTCGTCGCCAACTGCACACCGCATTCTTTTGCCGGTCGCCAAGGTGCACGCTCTGTTTTCTGCAACCCCTCCCTCTCTCAGTCGCTTGTTGCTAAGTTCGCAGGGATCAATTTTTTCCTTGTTCATTTTCTTTCTTAGTTCAACCAATACGACCAATTTTTTATGGATGTTTTTTGGGGGTAAGCCTATTTTTTTGGGACACAAGAAAGTTGAGCTTCACTTGGAAATGATATGGAAACATGGCTGTAATCTCTTCCAAATAGCAGCTCGTCAAATCCTCAGAACATTTGCCCATCGGTTGAATCGAATATGTTCAGTCCCACTTGTAAATTTAACCAAAAACCTCCACAACCGACTAAACGAAGACATTGAGCACAAATTTTCTGAGAAGAGGCAAGTGATTCTCACTAATGAGCTTGCACACACCACTCTATTGAATTGTCATTCTGATTCGGTCGCCTTGAGCTTTTTTCGACGGTGA ATGCCCGTTTCTTCCTTCTCTCCCTATCTCTCTCTCTCTGCTGTAATCACGCCGGGCGTCAGCACACACGACTGCGCGACTTTCTTCTACTCGTCGCCAACTGCACACCGCATTCTTTTGCCGGTCGCCAAGGTGCACGCTCTGTTTTCTGCAACCCCTCCCTCTCTCAGTCGCTTGTTGCTAAGTTCGCAGGGATCAATTTTTTCCTTGTTCATTTTCTTTCTTAGTTCAACCAATACGACCAATTTTTTATGGATGTTTTTTGGGGGTAAGCCTATTTTTTTGGGACACAAGAAAGTTGAGCTTCACTTGGAAATGATATGGAAACATGGCTGTAATCTCTTCCAAATAGCAGCTCGTCAAATCCTCAGAACATTTGCCCATCGGTTGAATCGAATATGTTCAGTCCCACTTGTAAATTTAACCAAAAACCTCCACAACCGACTAAACGAAGACATTGAGCACAAATTTTCTGAGAAGAGGCAAGTGATTCTCACTAATGAGCTTGCACACACCACTCTATTGAATTGTCATTCTGATTCGGTCGCCTTGAGCTTTTTTCGACGGTGA ATGCCCGTTTCTTCCTTCTCTCCCTATCTCTCTCTCTCTGCTGTAATCACGCCGGGCGTCAGCACACACGACTGCGCGACTTTCTTCTACTCGTCGCCAACTGCACACCGCATTCTTTTGCCGGTCGCCAAGGTGCACGCTCTGTTTTCTGCAACCCCTCCCTCTCTCAGTCGCTTGTTGCTAAGTTCGCAGGGATCAATTTTTTCCTTGTTCATTTTCTTTCTTAGTTCAACCAATACGACCAATTTTTTATGGATGTTTTTTGGGGGTAAGCCTATTTTTTTGGGACACAAGAAAGTTGAGCTTCACTTGGAAATGATATGGAAACATGGCTGTAATCTCTTCCAAATAGCAGCTCGTCAAATCCTCAGAACATTTGCCCATCGGTTGAATCGAATATGTTCAGTCCCACTTGTAAATTTAACCAAAAACCTCCACAACCGACTAAACGAAGACATTGAGCACAAATTTTCTGAGAAGAGGCAAGTGATTCTCACTAATGAGCTTGCACACACCACTCTATTGAATTGTCATTCTGATTCGGTCGCCTTGAGCTTTTTTCGACGGTGA MPVSSFSPYLSLSAVITPGVSTHDCATFFYSSPTAHRILLPVAKVHALFSATPPSLSRLLLSSQGSIFSLFIFFLSSTNTTNFLWMFFGGKPIFLGHKKVELHLEMIWKHGCNLFQIAARQILRTFAHRLNRICSVPLVNLTKNLHNRLNEDIEHKFSEKRQVILTNELAHTTLLNCHSDSVALSFFRR Homology
BLAST of Lag0000181 vs. NCBI nr
Match: XP_022927167.1 (putative pentatricopeptide repeat-containing protein At1g16830 [Cucurbita moschata]) HSP 1 Score: 132.9 bits (333), Expect = 2.9e-27 Identity = 63/82 (76.83%), Postives = 70/82 (85.37%), Query Frame = 0
BLAST of Lag0000181 vs. NCBI nr
Match: XP_023519013.1 (putative pentatricopeptide repeat-containing protein At1g16830 [Cucurbita pepo subsp. pepo] >XP_023519014.1 putative pentatricopeptide repeat-containing protein At1g16830 [Cucurbita pepo subsp. pepo] >XP_023519015.1 putative pentatricopeptide repeat-containing protein At1g16830 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 132.1 bits (331), Expect = 5.0e-27 Identity = 62/82 (75.61%), Postives = 71/82 (86.59%), Query Frame = 0
BLAST of Lag0000181 vs. NCBI nr
Match: XP_023001025.1 (putative pentatricopeptide repeat-containing protein At1g16830 [Cucurbita maxima] >XP_023001026.1 putative pentatricopeptide repeat-containing protein At1g16830 [Cucurbita maxima] >XP_023001027.1 putative pentatricopeptide repeat-containing protein At1g16830 [Cucurbita maxima] >XP_023001028.1 putative pentatricopeptide repeat-containing protein At1g16830 [Cucurbita maxima] >XP_023001029.1 putative pentatricopeptide repeat-containing protein At1g16830 [Cucurbita maxima]) HSP 1 Score: 132.1 bits (331), Expect = 5.0e-27 Identity = 63/82 (76.83%), Postives = 70/82 (85.37%), Query Frame = 0
BLAST of Lag0000181 vs. NCBI nr
Match: XP_038894703.1 (LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g16830 [Benincasa hispida]) HSP 1 Score: 126.7 bits (317), Expect = 2.1e-25 Identity = 62/82 (75.61%), Postives = 69/82 (84.15%), Query Frame = 0
BLAST of Lag0000181 vs. NCBI nr
Match: XP_011659004.1 (putative pentatricopeptide repeat-containing protein At1g16830 isoform X1 [Cucumis sativus] >KGN65906.1 hypothetical protein Csa_023183 [Cucumis sativus]) HSP 1 Score: 126.3 bits (316), Expect = 2.7e-25 Identity = 59/82 (71.95%), Postives = 71/82 (86.59%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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