Lag0000139 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCGGACGATAGTAAAAATTAAACGCTTGATCCTTCAACTTTGCATGAAACGTCCATTACAGTCCAAGGTTCCTATGGATCAAGGTATGCAGTCCTACCTAACCCTTCTTAATTCAATTTACTTTTATGCAGATAGCTTGCATAATGCATTTTTCGGTGCATAAACGATATTGAGGCAACTTTGTTTTGTTTATTTGCATTGCTCGCATGTTTCCCTTCAGGTGTTCCCCATCCTTGTTCAATTCTATTTGTTTATTGCATGCTCATTGTTCTCACAAAGATGCTCCTTTTTTATGCGTCGCTTCTTGAGTTAAGGTCTTAAATTGACGCTCTAGATGTGGCTAGTTGGAGCTTTCTCCTTACAAAAATGTTGGTTCAACGTGCTTGATCTTTCAATCTTGTACGGTGATAGGCCCCAGATAACGAAAGTGTATGAACGAAGGCGCGGGAAGAAGAAAGAGAAGAGAGAGAGTGAGGAGTAGCGAGTTTGTTAGGAGTAGTGGGGCCCGCGTGAATGTCTGTGCGTGGGTAGTAGGGGGTTATAAGGGAATGTTTCGTTAGGGCGTAGGCATCTTTTTGCTATTTTGAATTGTATTTCTCTGATTGAGGAAATTGGGAGAGAGGGGAGCTCTCGAATCTTCCCCGGTTGATGTTGATAAATAAAATTGGTGGCTAAGGCCTATCAATTTTGGTATCAGAGCACTTTGCTGGGGAATGGTGGGAAAGATGGAAGGACGGATCGTTGCGTTGGAAGAGAAAATGTCTGAGTTGGCCGTGAAACAGGTAGATATGGAGGTTAGTTTAGGAACACAGATTGCAGAGGTTGGAGAGGCTCAGGCAAATGTTGACGCCAAATTGGATCTTCAGTTTACAATGGTTAGAGAAGAGATGAAGGCAATGTTTGCTAAGATAGAAGGAATGGTGCATACCGAGAGGGTTCCCCGTCGTCGGAAAGGACCGTTACTGATAGAGGCAAAAGAGTGGTGGAAGAAGAATCGAGCCAGAAACACGAAGAACCCAAAGAAAGCAGTGCGACGTTTTCGAAAGGAAGCGAAGGGATTCAAGCACCAACTAATCGAGATATTCCGCTGTTTGATATGCGATTGAGAAAGCTTGAAGTGCCGGTGTACAAGGGAGAGGAAGGCGAAGACCCAGATGGGTGGTTGCATCGCGTGGAGAGGTACTTTGTGGTTAATCGACTGTCTGAGAAAGACAAGCTCGAAGCGGCGGTGATGTGTTTGGAAGGTGAAGCCTTGTCTTGGCACCAATACGAGGAAGACCGAACACCGATACGTAGCTGGCAGGATTTCGAACGCTGTTGCTAG ATGCGGACGATAGTAAAAATTAAACGCTTGATCCTTCAACTTTGCATGAAACGTCCATTACAGTCCAAGGTTCCTATGGATCAAGGTGTTCCCCATCCTTGTTCAATTCTATTTGTTTATTGCATGCTCATTGTTCTCACAAAGATGCTCCTTTTTTATGCGTCGCTTCTTGAGTTAAGAGCACTTTGCTGGGGAATGGTGGGAAAGATGGAAGGACGGATCGTTGCGTTGGAAGAGAAAATGTCTGAGTTGGCCGTGAAACAGGTAGATATGGAGGTTAGTTTAGGAACACAGATTGCAGAGGTTGGAGAGGCTCAGGCAAATGTTGACGCCAAATTGGATCTTCAGTTTACAATGGGTTCCCCGTCGTCGGAAAGGACCGTTACTGATAGAGGCAAAAGAGTGGTGGAAGAAGAATCGAGCCAGAAACACGAAGAACCCAAAGAAAGCAGTGCGACGTTTTCGAAAGGAAGCGAAGGGATTCAAGCACCAACTAATCGAGATATTCCGCTGTTTGATATGCGATTGAGAAAGCTTGAAGTGCCGGTGTACAAGGGAGAGGAAGGCGAAGACCCAGATGGGTGGTTGCATCGCGTGGAGAGGTACTTTGTGGTTAATCGACTGTCTGAGAAAGACAAGCTCGAAGCGGCGGTGATGTGTTTGGAAGGTGAAGCCTTGTCTTGGCACCAATACGAGGAAGACCGAACACCGATACGTAGCTGGCAGGATTTCGAACGCTGTTGCTAG ATGCGGACGATAGTAAAAATTAAACGCTTGATCCTTCAACTTTGCATGAAACGTCCATTACAGTCCAAGGTTCCTATGGATCAAGGTGTTCCCCATCCTTGTTCAATTCTATTTGTTTATTGCATGCTCATTGTTCTCACAAAGATGCTCCTTTTTTATGCGTCGCTTCTTGAGTTAAGAGCACTTTGCTGGGGAATGGTGGGAAAGATGGAAGGACGGATCGTTGCGTTGGAAGAGAAAATGTCTGAGTTGGCCGTGAAACAGGTAGATATGGAGGTTAGTTTAGGAACACAGATTGCAGAGGTTGGAGAGGCTCAGGCAAATGTTGACGCCAAATTGGATCTTCAGTTTACAATGGGTTCCCCGTCGTCGGAAAGGACCGTTACTGATAGAGGCAAAAGAGTGGTGGAAGAAGAATCGAGCCAGAAACACGAAGAACCCAAAGAAAGCAGTGCGACGTTTTCGAAAGGAAGCGAAGGGATTCAAGCACCAACTAATCGAGATATTCCGCTGTTTGATATGCGATTGAGAAAGCTTGAAGTGCCGGTGTACAAGGGAGAGGAAGGCGAAGACCCAGATGGGTGGTTGCATCGCGTGGAGAGGTACTTTGTGGTTAATCGACTGTCTGAGAAAGACAAGCTCGAAGCGGCGGTGATGTGTTTGGAAGGTGAAGCCTTGTCTTGGCACCAATACGAGGAAGACCGAACACCGATACGTAGCTGGCAGGATTTCGAACGCTGTTGCTAG MRTIVKIKRLILQLCMKRPLQSKVPMDQGVPHPCSILFVYCMLIVLTKMLLFYASLLELRALCWGMVGKMEGRIVALEEKMSELAVKQVDMEVSLGTQIAEVGEAQANVDAKLDLQFTMGSPSSERTVTDRGKRVVEEESSQKHEEPKESSATFSKGSEGIQAPTNRDIPLFDMRLRKLEVPVYKGEEGEDPDGWLHRVERYFVVNRLSEKDKLEAAVMCLEGEALSWHQYEEDRTPIRSWQDFERCC Homology
BLAST of Lag0000139 vs. NCBI nr
Match: XP_038904464.1 (uncharacterized protein LOC120090832 [Benincasa hispida]) HSP 1 Score: 149.8 bits (377), Expect = 3.0e-32 Identity = 88/203 (43.35%), Postives = 118/203 (58.13%), Query Frame = 0
BLAST of Lag0000139 vs. NCBI nr
Match: TYJ97047.1 (aminoacyl-tRNA ligase [Cucumis melo var. makuwa]) HSP 1 Score: 113.2 bits (282), Expect = 3.2e-21 Identity = 49/71 (69.01%), Postives = 59/71 (83.10%), Query Frame = 0
BLAST of Lag0000139 vs. NCBI nr
Match: KAA0039074.1 (keratin, type I cytoskeletal 10-like [Cucumis melo var. makuwa] >TYJ99731.1 keratin, type I cytoskeletal 10-like [Cucumis melo var. makuwa]) HSP 1 Score: 103.2 bits (256), Expect = 3.3e-18 Identity = 56/96 (58.33%), Postives = 71/96 (73.96%), Query Frame = 0
BLAST of Lag0000139 vs. NCBI nr
Match: XP_022897442.1 (uncharacterized protein LOC111411108 [Olea europaea var. sylvestris]) HSP 1 Score: 99.4 bits (246), Expect = 4.7e-17 Identity = 58/161 (36.02%), Postives = 87/161 (54.04%), Query Frame = 0
BLAST of Lag0000139 vs. NCBI nr
Match: EXB66634.1 (hypothetical protein L484_024931 [Morus notabilis]) HSP 1 Score: 99.0 bits (245), Expect = 6.2e-17 Identity = 41/74 (55.41%), Postives = 60/74 (81.08%), Query Frame = 0
BLAST of Lag0000139 vs. ExPASy TrEMBL
Match: A0A5D3BD43 (Aminoacyl-tRNA ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold506G001130 PE=4 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 1.5e-21 Identity = 49/71 (69.01%), Postives = 59/71 (83.10%), Query Frame = 0
BLAST of Lag0000139 vs. ExPASy TrEMBL
Match: A0A5A7T6F9 (Keratin, type I cytoskeletal 10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold252G00060 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 1.6e-18 Identity = 56/96 (58.33%), Postives = 71/96 (73.96%), Query Frame = 0
BLAST of Lag0000139 vs. ExPASy TrEMBL
Match: W9RBJ4 (Retrotrans_gag domain-containing protein OS=Morus notabilis OX=981085 GN=L484_024931 PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 3.0e-17 Identity = 41/74 (55.41%), Postives = 60/74 (81.08%), Query Frame = 0
BLAST of Lag0000139 vs. ExPASy TrEMBL
Match: A0A2I0WBL0 (1-phosphatidylinositol-3-phosphate 5-kinase OS=Dendrobium catenatum OX=906689 GN=MA16_Dca024607 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 2.5e-16 Identity = 41/75 (54.67%), Postives = 60/75 (80.00%), Query Frame = 0
BLAST of Lag0000139 vs. ExPASy TrEMBL
Match: A0A2I0VV18 (1-phosphatidylinositol-3-phosphate 5-kinase OS=Dendrobium catenatum OX=906689 GN=MA16_Dca015979 PE=4 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 3.3e-16 Identity = 38/75 (50.67%), Postives = 61/75 (81.33%), Query Frame = 0
BLAST of Lag0000139 vs. TAIR 10
Match: AT1G67020.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf; Has 72 Blast hits to 72 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 57.0 bits (136), Expect = 2.5e-08 Identity = 41/125 (32.80%), Postives = 60/125 (48.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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