
IVF0027049 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CACTAAATTAGGGTTTCTGGAGCAGGCCTCGTCGACGTCCAGCCGTCATGGTACTTCTTCTCTTTCTCTGTTTTTCTGAAATTTCAATCTCTCTTACTTCTTGTCGTGATTCCCTATGTGTTCCACTTGCCTGATTTATTTCACTATTCGTTCTATTTGGTTGCGTCAATTAGTTCTGTGATGGAGAGGCTAATAGCTGTAGTTACGTGCCTTTTGTTTTTTCGTAGTATCACTTGATCTAGGACTGTGTTAGAATTAAACTGGTTTATCTGTTGTACTCGAGCTTAGCTTGGATTAGTTAGCGAGGTGAGAACGTGAGTTCTGTGGGGCGTTGTAGAATAAGCCATCTAAATCATATGGCAGTTTGTGCGCGATCACGTCGATTTGGAAGTATTTTTGTTGCAGACTGTAAGAGAATGAATTGAAGGATTACTGATATTTGTAACTTATGGAAACTGGGTCCTGGATTTAGGATATGCACGATTGCTGCATGCGAGTGAAATATGTAGTGTCACTGAACTCGTAATGTTTTTTCGGATAAGGAACAGTTTCGTTGATGTTTGAAATTATAAGAGGGGAACTCCGATACGAGTAATTACAGAAGGCTTCTCCAATAAGAGGAAGGAGGAATAATTATAGTGATGGCACTGAACTTTTGAACGCTTTAATATTGAGTGGGATTGGGATGTTTCATCAAAAAATTGCTTAAAAGAAGACTTTTCACGAGGTAAACATTGCTCGTGGAGTGTGATTTTAAATTCTGGAGCTTTGGTTATAGTCTAAGAAGCACAGACACTTCAGTTTGGATAGTGTGTCCATGTTCGACAGGACACTCGTTAAGTAGACTAAAAAGACACGTACATGATAATAATAATAACTTTTGAGCATGGAATACATCAAGCTAAGTCTTTTAAGCATATAAATGCATCGACTCATTTACTAAGAATTTTCTTTTACTATAAAATGATATATATATATTTTAAAAATGAATGTTTTAATAATAGTGTTATTGTTGTGTCTTGTCCTAGATTTTTAAAATATGGTGTGTCGCTGTGTCTCGTATCTGTGTCATATTCGTGTCTCGTATCTGTGTCATGTCGTATTCGTGTCTCGTATCCATGTTCGTGCTTCTTAGGTTATAGTAAGTTTGTGGTTGTGCCCTGCTAAAGAAAATTTTAAACCATGGATTCAAGAGGCAGTACTGGGATTGTAGTATCTGTGTGTCTTTTGTCATTACAGCTTGTAGCGTTGTGGCTTAAGACTTGATTTGTTGATATGGTTATGGCAAACAGGTGAACGTTCCCAAGACCAAGAAGACTTATTGCAAGAGCAAGGAGTGCAGGAAGCATACCTTGCACAAGGTTACACAATATAAGAAGGGAAAGGATAGTCTTGCTGCACAGGGAAAGCGTAGGTACGATCGCAAGCAATCAGGATATGGAGGTCAGACCAAGCCCGTGTTTCACAAGAAGGTTAGTTAATTTTCTCACGTCCAGTCAAATTCTTACTTTCTCTATTTTCGAGGTTCTATTTAGATTAGAACTTTATTGAAACTCCTGAATCTCACAGGCAAAAACGACCAAGAAGATTGTGTTGAGGCTTCAGTGCCAAGGTTGCAAACACGTATCCCAGCACCCTATCAAGGTCAGAATGCAAAGTATTTTGTTCTTTTTTTTTTTTTTTTTTTCCGTTTAAGACCTCTCTCAATTAAGTATCTTGATCATTTTGCAAAAAATCTTTCAAACATATAGAACCGTTCTCATACTATCTAAGGCTGTTGGTTCAAACAATGTTAATACGTCTTCTTTCCCGCAAAGAAAATACCCATTGCTACACTAGTGAAGGAAGTTCATACTTGATACCTGGTTTTAAATGCCTTTACCTTTGGGATAGTATTGTTTTCTCCATTCCGGTACTTGGGTATAGTTTTGTAATGAGCATTGAATTGGTACATGGTGAGAAAATTGCGATATTTTGAAGTAATTGCTTACTATTTAAGACAAGATGCAAGTCCAAATGGGAAACCTAACTGTTAGATATTATGTGGTGTGGATATTGTGCGCTTTCCTTATCGTTATATGTCTTAATTGTCGAATGCAGAGATGCAAGCACTTCGAAATCGGTGGAGACAAGAAGGGGAAGGGAACTTCTCTTTTCTAGACCCTTTGATCAGTTTTTTATCTTTTGTCACAAGATTATTTGTTATTGGAGTTGTTGGAGAATTGCTTTGTTTTGGTTCAGCAATTAGATCTACATGTCGCAACGATACTTTTTAGCTGAAACTTTCTTATCTTAATTATTGAATTCCCAAAATTTTGATGCTCTTTGATTGATTTATCTGAGTCTTCTCTTATAAATTTGTTTGGCCGCTGAATCTGATTGGTCGGTGCCTCTCAAGTTAATTTGATATATTGTTGTTAGATTTGTGACAAACTTTGTATCTTCTAAAT CACTAAATTAGGGTTTCTGGAGCAGGCCTCGTCGACGTCCAGCCGTCATGGTGAACGTTCCCAAGACCAAGAAGACTTATTGCAAGAGCAAGGAGTGCAGGAAGCATACCTTGCACAAGGTTACACAATATAAGAAGGGAAAGGATAGTCTTGCTGCACAGGGAAAGCGTAGGTACGATCGCAAGCAATCAGGATATGGAGGTCAGACCAAGCCCGTGTTTCACAAGAAGGCAAAAACGACCAAGAAGATTGTGTTGAGGCTTCAGTGCCAAGGTTGCAAACACGTATCCCAGCACCCTATCAAGAGATGCAAGCACTTCGAAATCGGTGGAGACAAGAAGGGGAAGGGAACTTCTCTTTTCTAGACCCTTTGATCAGTTTTTTATCTTTTGTCACAAGATTATTTGTTATTGGAGTTGTTGGAGAATTGCTTTGTTTTGGTTCAGCAATTAGATCTACATGTCGCAACGATACTTTTTAGCTGAAACTTTCTTATCTTAATTATTGAATTCCCAAAATTTTGATGCTCTTTGATTGATTTATCTGAGTCTTCTCTTATAAATTTGTTTGGCCGCTGAATCTGATTGGTCGGTGCCTCTCAAGTTAATTTGATATATTGTTGTTAGATTTGTGACAAACTTTGTATCTTCTAAAT ATGGTGAACGTTCCCAAGACCAAGAAGACTTATTGCAAGAGCAAGGAGTGCAGGAAGCATACCTTGCACAAGGTTACACAATATAAGAAGGGAAAGGATAGTCTTGCTGCACAGGGAAAGCGTAGGTACGATCGCAAGCAATCAGGATATGGAGGTCAGACCAAGCCCGTGTTTCACAAGAAGGCAAAAACGACCAAGAAGATTGTGTTGAGGCTTCAGTGCCAAGGTTGCAAACACGTATCCCAGCACCCTATCAAGAGATGCAAGCACTTCGAAATCGGTGGAGACAAGAAGGGGAAGGGAACTTCTCTTTTCTAG MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF Homology
BLAST of IVF0027049 vs. ExPASy Swiss-Prot
Match: Q96499 (60S ribosomal protein L44 OS=Gossypium hirsutum OX=3635 GN=RPL44 PE=3 SV=3) HSP 1 Score: 218.4 bits (555), Expect = 3.9e-56 Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0
BLAST of IVF0027049 vs. ExPASy Swiss-Prot
Match: O23290 (60S ribosomal protein L36a OS=Arabidopsis thaliana OX=3702 GN=RPL36AA PE=3 SV=3) HSP 1 Score: 206.5 bits (524), Expect = 1.5e-52 Identity = 98/105 (93.33%), Postives = 101/105 (96.19%), Query Frame = 0
BLAST of IVF0027049 vs. ExPASy Swiss-Prot
Match: O59870 (60S ribosomal protein L44 OS=Phaffia rhodozyma OX=264483 GN=RPL44 PE=3 SV=3) HSP 1 Score: 174.1 bits (440), Expect = 8.4e-43 Identity = 81/104 (77.88%), Postives = 92/104 (88.46%), Query Frame = 0
BLAST of IVF0027049 vs. ExPASy Swiss-Prot
Match: P0CQ51 (60S ribosomal protein L44 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=RPL44 PE=3 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 1.4e-42 Identity = 81/104 (77.88%), Postives = 92/104 (88.46%), Query Frame = 0
BLAST of IVF0027049 vs. ExPASy Swiss-Prot
Match: P0CQ50 (60S ribosomal protein L44 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=RPL44 PE=3 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 1.4e-42 Identity = 81/104 (77.88%), Postives = 92/104 (88.46%), Query Frame = 0
BLAST of IVF0027049 vs. ExPASy TrEMBL
Match: A0A059AD57 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_G02575 PE=3 SV=1) HSP 1 Score: 218.4 bits (555), Expect = 1.4e-53 Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0
BLAST of IVF0027049 vs. ExPASy TrEMBL
Match: A0A1U8KM57 (60S ribosomal protein L44 OS=Gossypium hirsutum OX=3635 GN=LOC107918511 PE=3 SV=1) HSP 1 Score: 218.4 bits (555), Expect = 1.4e-53 Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0
BLAST of IVF0027049 vs. ExPASy TrEMBL
Match: A0A5D2E9A1 (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_A03G203000v1 PE=3 SV=1) HSP 1 Score: 218.4 bits (555), Expect = 1.4e-53 Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0
BLAST of IVF0027049 vs. ExPASy TrEMBL
Match: A0A0B0MJ69 (60S ribosomal L44 OS=Gossypium arboreum OX=29729 GN=LOC108459374 PE=3 SV=1) HSP 1 Score: 218.4 bits (555), Expect = 1.4e-53 Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0
BLAST of IVF0027049 vs. ExPASy TrEMBL
Match: A0A5J5SG84 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A04G130000v1 PE=3 SV=1) HSP 1 Score: 218.4 bits (555), Expect = 1.4e-53 Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0
BLAST of IVF0027049 vs. NCBI nr
Match: XP_002278981.1 (PREDICTED: 60S ribosomal protein L44 [Vitis vinifera] >XP_002512948.1 60S ribosomal protein L44 [Ricinus communis] >XP_002515644.2 60S ribosomal protein L44 [Ricinus communis] >XP_004135958.1 60S ribosomal protein L44 [Cucumis sativus] >XP_004148568.1 60S ribosomal protein L44 [Cucumis sativus] >XP_006442884.1 60S ribosomal protein L44 [Citrus clementina] >XP_006478803.1 60S ribosomal protein L44 [Citrus sinensis] >XP_008461363.1 PREDICTED: 60S ribosomal protein L44 [Cucumis melo] >XP_008461845.1 PREDICTED: 60S ribosomal protein L44 [Cucumis melo] >XP_010031923.1 60S ribosomal protein L44 [Eucalyptus grandis] >XP_010066999.1 60S ribosomal protein L44 [Eucalyptus grandis] >XP_010648481.1 PREDICTED: 60S ribosomal protein L44 isoform X2 [Vitis vinifera] >XP_010648486.1 PREDICTED: 60S ribosomal protein L44 [Vitis vinifera] >XP_012072570.1 60S ribosomal protein L44 [Jatropha curcas] >XP_012438096.1 PREDICTED: 60S ribosomal protein L44 [Gossypium raimondii] >XP_012462607.1 PREDICTED: 60S ribosomal protein L44 [Gossypium raimondii] >XP_015868533.1 60S ribosomal protein L44 [Ziziphus jujuba] >XP_015902130.1 60S ribosomal protein L44 [Ziziphus jujuba] >XP_016666391.1 60S ribosomal protein L44 [Gossypium hirsutum] >XP_016674731.1 60S ribosomal protein L44 [Gossypium hirsutum] >XP_016679916.1 60S ribosomal protein L44 [Gossypium hirsutum] >XP_016703571.1 60S ribosomal protein L44 [Gossypium hirsutum] >XP_016735798.1 60S ribosomal protein L44 [Gossypium hirsutum] >XP_017220899.1 PREDICTED: 60S ribosomal protein L44 [Daucus carota subsp. sativus] >XP_017614223.1 PREDICTED: 60S ribosomal protein L44 [Gossypium arboreum] >XP_017617200.1 PREDICTED: 60S ribosomal protein L44 [Gossypium arboreum] >XP_017632331.1 PREDICTED: 60S ribosomal protein L44 [Gossypium arboreum] >XP_021615025.1 60S ribosomal protein L44 [Manihot esculenta] >XP_021634251.1 60S ribosomal protein L44 [Manihot esculenta] >XP_021655321.1 60S ribosomal protein L44 [Hevea brasiliensis] >XP_021689805.1 60S ribosomal protein L44 [Hevea brasiliensis] >XP_022145128.1 60S ribosomal protein L44 [Momordica charantia] >XP_022153188.1 60S ribosomal protein L44 [Momordica charantia] >XP_022725683.1 60S ribosomal protein L44 [Durio zibethinus] >XP_022743263.1 60S ribosomal protein L44 [Durio zibethinus] >XP_022762471.1 60S ribosomal protein L44 [Durio zibethinus] >XP_022850521.1 60S ribosomal protein L44 [Olea europaea var. sylvestris] >XP_022850524.1 60S ribosomal protein L44 [Olea europaea var. sylvestris] >XP_022863268.1 60S ribosomal protein L44 [Olea europaea var. sylvestris] >XP_022886056.1 60S ribosomal protein L44 [Olea europaea var. sylvestris] >XP_027079523.1 60S ribosomal protein L44 [Coffea arabica] >XP_028058574.1 60S ribosomal protein L44 [Camellia sinensis] >XP_028091556.1 60S ribosomal protein L44 [Camellia sinensis] >XP_028113737.1 60S ribosomal protein L44 [Camellia sinensis] >XP_030448100.1 60S ribosomal protein L44 [Syzygium oleosum] >XP_030456938.1 60S ribosomal protein L44 [Syzygium oleosum] >XP_030526793.1 60S ribosomal protein L44 [Rhodamnia argentea] >XP_030547538.1 60S ribosomal protein L44 [Rhodamnia argentea] >XP_031377256.1 60S ribosomal protein L44 [Punica granatum] >XP_034674208.1 60S ribosomal protein L44 [Vitis riparia] >XP_034703044.1 60S ribosomal protein L44 [Vitis riparia] >XP_038697425.1 60S ribosomal protein L44 [Tripterygium wilfordii] >XP_038701677.1 60S ribosomal protein L44 [Tripterygium wilfordii] >XP_038706111.1 60S ribosomal protein L44 [Tripterygium wilfordii] >XP_038721345.1 60S ribosomal protein L44 [Tripterygium wilfordii] >XP_038898844.1 60S ribosomal protein L44 [Benincasa hispida] >XP_038903595.1 60S ribosomal protein L44 [Benincasa hispida] >XP_038992457.1 60S ribosomal protein L44 [Hibiscus syriacus] >XP_038992458.1 60S ribosomal protein L44 [Hibiscus syriacus] >XP_038995556.1 60S ribosomal protein L44 [Hibiscus syriacus] >XP_038998558.1 60S ribosomal protein L44 [Hibiscus syriacus] >XP_039001768.1 60S ribosomal protein L44 [Hibiscus syriacus] >XP_039004580.1 60S ribosomal protein L44 [Hibiscus syriacus] >XP_039018319.1 60S ribosomal protein L44 [Hibiscus syriacus] >XP_039019477.1 60S ribosomal protein L44 [Hibiscus syriacus] >XP_039040184.1 60S ribosomal protein L44 isoform X2 [Hibiscus syriacus] >XP_039046447.1 60S ribosomal protein L44 [Hibiscus syriacus] >XP_040962785.1 60S ribosomal protein L44 [Gossypium hirsutum] >XP_040967481.1 60S ribosomal protein L44 [Gossypium hirsutum] >XP_042506994.1 60S ribosomal protein L44 [Macadamia integrifolia] >Q96499.3 RecName: Full=60S ribosomal protein L44 [Gossypium hirsutum] >KAA0058576.1 60S ribosomal protein L44-like [Cucumis melo var. makuwa] >KAA3482652.1 60S ribosomal protein L44-like [Gossypium australe] >KAB1993992.1 hypothetical protein ES319_D13G069300v1 [Gossypium barbadense] >KAF7842640.1 60S ribosomal protein L44 [Senna tora] >KAF8033219.1 hypothetical protein BT93_D1968 [Corymbia citriodora subsp. variegata] >KAG5564396.1 hypothetical protein RHGRI_000555 [Rhododendron griersonianum] >KAG8475355.1 hypothetical protein CXB51_032162 [Gossypium anomalum] >MBA0726789.1 hypothetical protein [Gossypium laxum] >OMO60124.1 Ribosomal protein L44e [Corchorus capsularis] >OMO89748.1 Ribosomal protein L44e [Corchorus olitorius] >PIN12620.1 60S ribosomal protein L44 [Handroanthus impetiginosus] >TXG56925.1 hypothetical protein EZV62_018238 [Acer yangbiense] >TYG36541.1 hypothetical protein ES288_D13G073000v1 [Gossypium darwinii] >TYH33632.1 hypothetical protein ES332_D13G072100v1 [Gossypium tomentosum] >TYI45922.1 hypothetical protein E1A91_D13G071400v1 [Gossypium mustelinum] >CAA2977522.1 60S ribosomal L44 [Olea europaea subsp. europaea] >GAY32130.1 hypothetical protein CUMW_273290 [Citrus unshiu]) HSP 1 Score: 217 bits (553), Expect = 2.82e-71 Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0
BLAST of IVF0027049 vs. NCBI nr
Match: XP_007148440.1 (hypothetical protein PHAVU_006G208900g [Phaseolus vulgaris] >XP_007159073.1 hypothetical protein PHAVU_002G206100g [Phaseolus vulgaris] >XP_014492317.1 60S ribosomal protein L44 [Vigna radiata var. radiata] >XP_014517837.1 60S ribosomal protein L44 [Vigna radiata var. radiata] >XP_015943530.1 60S ribosomal protein L44 [Arachis duranensis] >XP_015957532.1 60S ribosomal protein L44 [Arachis duranensis] >XP_016182138.1 60S ribosomal protein L44 [Arachis ipaensis] >XP_016190584.1 60S ribosomal protein L44 [Arachis ipaensis] >XP_017425406.1 PREDICTED: 60S ribosomal protein L44 [Vigna angularis] >XP_017435381.1 PREDICTED: 60S ribosomal protein L44 [Vigna angularis] >XP_020222889.1 60S ribosomal protein L44 [Cajanus cajan] >XP_025622382.1 60S ribosomal protein L44 [Arachis hypogaea] >XP_025639594.1 60S ribosomal protein L44 [Arachis hypogaea] >XP_025686071.1 60S ribosomal protein L44 [Arachis hypogaea] >XP_025691242.1 60S ribosomal protein L44 [Arachis hypogaea] >XP_027338998.1 60S ribosomal protein L44 [Abrus precatorius] >XP_027346687.1 60S ribosomal protein L44 [Abrus precatorius] >XP_027917477.1 60S ribosomal protein L44 [Vigna unguiculata] >XP_027930583.1 60S ribosomal protein L44 [Vigna unguiculata] >TKY59532.1 60S ribosomal protein L44 [Spatholobus suberectus] >ESW20434.1 hypothetical protein PHAVU_006G208900g [Phaseolus vulgaris] >ESW31067.1 hypothetical protein PHAVU_002G206100g [Phaseolus vulgaris] >KOM31304.1 hypothetical protein LR48_Vigan01g085900 [Vigna angularis] >QCD84065.1 large subunit ribosomal protein L44e [Vigna unguiculata]) HSP 1 Score: 216 bits (551), Expect = 5.70e-71 Identity = 104/105 (99.05%), Postives = 105/105 (100.00%), Query Frame = 0
BLAST of IVF0027049 vs. NCBI nr
Match: PPD69100.1 (hypothetical protein GOBAR_DD34021 [Gossypium barbadense]) HSP 1 Score: 217 bits (553), Expect = 6.58e-71 Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0
BLAST of IVF0027049 vs. NCBI nr
Match: KJB79863.1 (hypothetical protein B456_013G070100 [Gossypium raimondii]) HSP 1 Score: 217 bits (553), Expect = 7.02e-71 Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0
BLAST of IVF0027049 vs. NCBI nr
Match: XP_012479828.1 (PREDICTED: 60S ribosomal protein L44-like [Gossypium raimondii]) HSP 1 Score: 217 bits (553), Expect = 8.01e-71 Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0
BLAST of IVF0027049 vs. TAIR 10
Match: AT3G23390.1 (Zinc-binding ribosomal protein family protein ) HSP 1 Score: 206.5 bits (524), Expect = 1.1e-53 Identity = 98/105 (93.33%), Postives = 101/105 (96.19%), Query Frame = 0
BLAST of IVF0027049 vs. TAIR 10
Match: AT4G14320.1 (Zinc-binding ribosomal protein family protein ) HSP 1 Score: 206.5 bits (524), Expect = 1.1e-53 Identity = 98/105 (93.33%), Postives = 101/105 (96.19%), Query Frame = 0
BLAST of IVF0027049 vs. TAIR 10
Match: AT4G14320.2 (Zinc-binding ribosomal protein family protein ) HSP 1 Score: 181.8 bits (460), Expect = 2.8e-46 Identity = 86/93 (92.47%), Postives = 89/93 (95.70%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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