IVF0027045 (gene) Melon (IVF77) v1

Overview
NameIVF0027045
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPolyadenylate-binding protein 1-like
Locationchr07: 21521784 .. 21527404 (+)
RNA-Seq ExpressionIVF0027045
SyntenyIVF0027045
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAAGAAGAAAAAAAGATAATATGAAAAGAAGAGTCGGAGACAGGATCCGAAACCTAATCTTGATTCAATTGGGAGCCAAATACACAACACTTACCAACCATCGATCGAGGGGCCACCGGAGTCGGAATCGGAGACGGAGATGGAGCGCAATTATAACTACGACGAGCACGAACACGAAGTCTACGGTGGGGATATTCCCGACGACGCCGAGATGGATGCCGACCTCGACATGTCTTCTGGTAGGGCCGACGAAGAAGGCTACGACGCCGAGCCTAGTAACGCTAACTCCAAGGTGCGCTTTTCGACTTCTTCTCTCTTCTCTTTCATCGACTCTTGTCTCTGATTCTGTGTTTCATTTTGTCTTTAAAAAAAATTATTCAGGACTTGGAGGACATGAAGAGGAGGCTTAAGGAGATCGAAGAGGAGGCTGGTGCCCTTCGGGAAATGCAGGCTAAAGTTGAGAAGGAGATGGGTGCTGTTCAAGGTATCTTTTCGTTCCATCTTTGTAATTCAGTTAGTTGGTTATTGAATTCTGTTCTTGATGTTTGTGAGGGGAATTTAGGTTGCTTGAATTAGCTCTGTAGCTGTTTTTCTTTACTGGAAAAGATCAAAAAGGGGGGAAAAACCTAGTTTTAACCTTTTAAGACTGATCACATGTTTCATATCGAAGGATAGCTTCCCGAATCTAGAATCAGGTTGCGTGAAGTTCTAAGAGCTGTTTGGGTTTATCGTTGTTAGCTGTATTGTACTTGAAGGATGCAATGGTGGGTTTTTGGTATTCAAGTTTCAGAGTCTAGAATTTGGCGTGGTTTGCAGTGAAGGGATGTTGGAGGAAAATAGGAGAGTTTTGTGATTAACGGAGGTTGTCGAAAAGTTATTTAATGGTTTAAGAGTCCCTGGTGGGAAGTTTGGTAGTTGGTCTACTGCCACAAACTTCAAGCTTGGTTTCTCATAAAAACGTAATAAAATAAAACAAAAGATAGTTAGATATTGAAAATTCTGAGGCTTTGTGAATTTTTATTTATGATTGTTATGTCAAATAGGTGCAAAACGTTATTAGTTTTTTTGCTGGCAATCATCCAGAGAGTTGCAACTATTTCTATATTTGAATAAATTTTTTTCTCATATTTGAATTTTGAGTAAATTTCGGAAAGGTGTAACACTTACTTCACTTTAATATTGCCAAATTTTTATTATATTTCACTTATCAATGAAACTAATCAATTGTTTTAATGTACCCTCATGTCCTTTCCAGTCGTAAGCACATTGCATTTCTAGCTGTTCAAAACCTTTTGAACTTTCAGCTTGTATTTGTGGAATATGCAAGATGCATGTGTTCTATGTGGCATGCATGTCTGCTGATTAGATACTTCATAGAATGTTTTTTTTATAGCGAATAGACTAATCCTTTTCTTGTCATTATTTTATCCGCTTTTTGGTGGTGAGAAAATAGTAATTAGTGGAAGTCTTATTTCATACTTTGCTAGTTTGGTTAACCATCTTTTTTCAGTATGTAGTTTGTAATTAACTTGTGTTCCTTTTAACATGTAAGAAGATTCATCCAGTACCTCTGCAACACAGGCTGAAAAGGAGGAAGTAGATTCTCGATCTGTATATGTTGGTAATGTGAGATTTATCACCCCTTTCCTGCCACTGTGTTATTTTAATATTGAAGTTTTACAGTACACATGTCTAGTATTACACCTTTACTTTTTATGCTCTAACTATCTAACGTAGTGGAACACATGCTTTTTAGTTATGCTTTCAAAGACCCTGGCAAATTTTGAAAACTAAAAAGTAGCTTTTGACTACTTGATTTTGTTTTTGAAATTCAGTTTTGAATTCAAAGGTGTTTTTAGGTAAGATGAAAAGCTTACCAACAAATAATGAGGAAAGTGTAAATTTCAAAAATAGAAAGCTAAAAGCAAAATGGTTATAAAGAAAATGCGTAAATTTTTCTTAATTTCTTTTTTACTTTGACTGTCATCTATTTTAAATGAAATATAGGAGATGCCGACAAGAAATATAGGAGACAAAAAAAAAAAAAAAACAATTATCATGAGGAAATACCATACCACAGTACAAATTGTAAGAATTTATTTAAGTTCTCTTACAAGTTTTTGTGGCAAATTATAACGTTATTGCCACAACTTGTTAAACAGAAAGTCCATGCCAAAAAGACCTATTTGTTAGTTAAATCAGGAACCTCTTCCCAGCCCATTCTCTTCTCATGGACAAGCGTCCTTTTTCTTCTTTCCCCAAAGAAATGTATTCTTTGTGTCGATTCATCGTGTTTTAGCTCTCTTTCTTTCTCTCTTCCTACTCCCCCTCCTCCTCCTTTTCCTCCTCTTCCTCCATATATATTTTTTTAAAATTTAGGGCAAATATCAATTACACCCTTGAACTTTGAGAGTTGTATCAATTTAAATCCTAAACTAATAATTGTATCAATTCAAACCCTGAACTTTCGGGTTGTATCAATTTAAACACTACTAATAATTGTATTAATTTAAACCTTAACTTTTCATAAATGCATCAGTTAAACCTTAACTTTCTTAAATGTATCATTTCCCTCAACTTTCCTAAGAGTGTCCAAGTAAAACATAATGGAAGGTTTAAATTGATACATTTATAAAAGTTCAGGGTCTAAGTTGATACACTTGTAAAAGTTTAGAGTATAAATTGATGCAACTGTGAGCTTGGAGTTAAATTGATTCAAACCCCAAAGTTTATGGGTACAAATTGAAAATTTTCCTAAAATTTATTTGATATAAAAATTGAAGTCCATGGCCATGCAACAATTAGCTAATATTATTTTCAGGTTACTTAAGTCACAAGTCCTTATGGGAGTTGGAATGAAGAAGAGACCGAATTCAGCGTATTGTCGGTTTAAGAGGAATTTGAGAATTAATGGCCTTGATACAGAGCAAACAACAGCCAGGTCTTATAGTCATATTTGGAAACGTCTTCTATAATCTATTCACTTTGTTGCACTCTGCTGGCAAATGGTCCTAAGAATTACTATTGTTCCCTTCCTGGGTGCATTGCATTAATCTAGCAAAGAAATCCCAAAAAGTTTATTCGATTCTAAATTATCCTGATTTCTTCTTATTGTTACCCTTCATGAATTGATGCTGCTATCATTGCGAGCTTCTTGCACTCCTTAGTTCATTCGCAGTATTTTCCTGCCAAAAGGAGCTTTTCCCACCATCTCTGTCCTGCAACTTTTACTTGTTGTGAAGTTTTCTATTCAGTGTTTTGGGCCGCGTACTCCCACCCATGGCTACACACATTTCCAATCTTTCTTTCTCTCGTAAACTACCTTTATGTTGTTTCATTTTTCATTTATGCTAACCACCCCATAGGGCAGACTCTTTTATAAATCTCAAGGAACAATCGAATATTTAGATGGTTTTAGAGACAATGGTAGGAGCGAGGCAAGGTTTCATGCCTCCCTTTTAGGCTTTAGTTAGCAAGGTTTCATGTGAAGATTTTTGTAATTATTTGTTAGGTCTCAATTGGCTTGATTGGATACTTTTTGTGGTAGTTTGGCTCCTTGTGGGGTTGCTTTCTTTATGGCTTTGTTTCCTTTCAGTTTTGCTGAACGTAAGGTTGGTTTTCAATAAAAAAAATTTCATGTTTTAGATGTGAAATATCTGATATTTGTTTCAAGGTTTTATATTATTTGTATCGAGTCACAATGAAATTCTAGGTCTAAAGATATTATTCTTTTAACATGATCATAATCTGAAGTTCTGTTAGTCCTGTTAAGTCTAGCTAGGCCGATGGCAGATTGAAGTGTCATTTCTCCTTGGGCATTTTTGCCTCTCGTCTTATTTTACATGGCTTTCCAACATCATATTTCAATACAAAATGATTTATTATTTCTGTCCTGGTATTTTCACTTCAGGTCGACTATGCATGCACTCCTGAAGAGGTCCAACAGCATTTTCAATCATGTGGGACAGTGAATAGAGTGACAATTTTGACGGACAAATTTGGTCACCCCAAGGGATTTGCTTATGTTGAGTTTGTGGAGGTTGATGCTGTCCAGAATGCTTTGCTGTTAAATGAGTCAGAGTTGCACGGTCGTCAACTTAAGGTCTTTTGAACTTAGTTACACTCTTTAACTTTCTATCAATAGTGATTGTCACTAATAGGACGCTGATAGTGTGTGTATGTCGGAGGAAGACTTTGGGGGATAAGAGAAGTTGTGACTTCTGAGTGAAAGGTGTATATAGAGGGGAAAATTATATGTAGAAGCATTTGCTTTTGGTTAGTTGAGTTCGCTAGGTTTGGGAGACTAGGAGCTTCTGCACATCCCCGAGCCTCTACACTGTTCGTTGATACGTAATATTGACTTCTATCACTGACCATGTCCATTGGTACATTTTGCAGGTCTCTGCTAAAAGGACAAATGTGCCGGGCATGAAGCAATACCGCGGAAGGAGGCCAAACCCTTTTGGCTTTCGAGGTCGCCGGCCTTTCACGCCTACTGCACCTTATCCTTCATATGGTTATGGGTAAGCACTAAACTACTATATTGCTTCTCACTCTATGGTATGACGAAGAATTTGAAATGCTTGTATGCAAGTCGTAAGGCATGGTATGTGCCTGGAGGTTTATGTATTTGTGTAGCTTTCTTAACACACCCTCTTAGAGGTCATAGTTTCTTTGCCTTCCCGCTCCACATAGGATGTAATCTTAGAAGTCTTTCATGTTGGTAATATCATGTGTTGGGATAAATAATCTCTCCCAACGTTTCCTGTTTTGTTATGGTACATATGCGATTCAAATGTGAAAATTTACAAACAAATTTCAATGACAAGCCAATTGGTCATAAATATTCTACTATTTTGACAAAATAGTTTAGTTTGCATATATATGTATATACATATTGCCATTTCTTCTTTTGGATATTTAAATCATGATTGTGCTGCATTTCTTTAAAATTTTTGTCAAAAAATGATTATCATTCAGGTGTGGGAGACAAATTGCACTCTTTTAGAGCAATCAACTTCTAATGCATATTGTTGAAGGGGAATTAGAGCGTCGACTGTCCACTTCTTTTCTTCTCTCTTTGCTGATTTGAAGGAATTAATTAGTGGAATGTTGTACACTTCTAATTGAAAATTCAATTCCTTTCACTTCCAGCTTTATAATGTGAGTTTCTATCTTCTTTCTTTATGCAGAAGGGTCCCAAGGTTCAGGCGACCGATGCGGTACAGACCCTACTAGGAGATACAATGCTCGTACTACCGCAAAATTATTGTTTGGGATCTAGTGTTCCTTCGACTCAATGGTGTTTTTACCATCTCTATAACTTGGAGGGTGTGGAAAACATTGTACTTTATTGATGTTTCAACAGTCCCAATTGAGTTTCTTATGAACTTGGTAGCAGTTTGTAGCTTTGAGGGGGTAAAAGATTTGTGGACTGGTTAACAATTTGTTGGCTCTGGAAGGGCTGAAAAAACCATGTTATCATCAACCATAAGAGAATTTGGAAGAAAGAAAATTAAGGAGATTAAAGGACATAGAATTCTTGTGTATGATGAATTGGAACTGATCAGGATGTAGAATTCTTTGTTATTTAAGAAGCAATTATAAGTTGATATGA

mRNA sequence

AAAAAAAGAAGAAAAAAAGATAATATGAAAAGAAGAGTCGGAGACAGGATCCGAAACCTAATCTTGATTCAATTGGGAGCCAAATACACAACACTTACCAACCATCGATCGAGGGGCCACCGGAGTCGGAATCGGAGACGGAGATGGAGCGCAATTATAACTACGACGAGCACGAACACGAAGTCTACGGTGGGGATATTCCCGACGACGCCGAGATGGATGCCGACCTCGACATGTCTTCTGGTAGGGCCGACGAAGAAGGCTACGACGCCGAGCCTAGTAACGCTAACTCCAAGGACTTGGAGGACATGAAGAGGAGGCTTAAGGAGATCGAAGAGGAGGCTGGTGCCCTTCGGGAAATGCAGGCTAAAGTTGAGAAGGAGATGGGTGCTGTTCAAGAAGATTCATCCAGTACCTCTGCAACACAGGCTGAAAAGGAGGAAGTAGATTCTCGATCTGTATATGTTGGTAATGTCGACTATGCATGCACTCCTGAAGAGGTCCAACAGCATTTTCAATCATGTGGGACAGTGAATAGAGTGACAATTTTGACGGACAAATTTGGTCACCCCAAGGGATTTGCTTATGTTGAGTTTGTGGAGGTTGATGCTGTCCAGAATGCTTTGCTGTTAAATGAGTCAGAGTTGCACGGTCGTCAACTTAAGGTCTCTGCTAAAAGGACAAATGTGCCGGGCATGAAGCAATACCGCGGAAGGAGGCCAAACCCTTTTGGCTTTCGAGGTCGCCGGCCTTTCACGCCTACTGCACCTTATCCTTCATATGGTTATGGAAGGGTCCCAAGGTTCAGGCGACCGATGCGGTACAGACCCTACTAGGAGATACAATGCTCGTACTACCGCAAAATTATTGTTTGGGATCTAGTGTTCCTTCGACTCAATGGTGTTTTTACCATCTCTATAACTTGGAGGGTGTGGAAAACATTGTACTTTATTGATGTTTCAACAGTCCCAATTGAGTTTCTTATGAACTTGGTAGCAGTTTGTAGCTTTGAGGGGGTAAAAGATTTGTGGACTGGTTAACAATTTGTTGGCTCTGGAAGGGCTGAAAAAACCATGTTATCATCAACCATAAGAGAATTTGGAAGAAAGAAAATTAAGGAGATTAAAGGACATAGAATTCTTGTGTATGATGAATTGGAACTGATCAGGATGTAGAATTCTTTGTTATTTAAGAAGCAATTATAAGTTGATATGA

Coding sequence (CDS)

ATGGAGCGCAATTATAACTACGACGAGCACGAACACGAAGTCTACGGTGGGGATATTCCCGACGACGCCGAGATGGATGCCGACCTCGACATGTCTTCTGGTAGGGCCGACGAAGAAGGCTACGACGCCGAGCCTAGTAACGCTAACTCCAAGGACTTGGAGGACATGAAGAGGAGGCTTAAGGAGATCGAAGAGGAGGCTGGTGCCCTTCGGGAAATGCAGGCTAAAGTTGAGAAGGAGATGGGTGCTGTTCAAGAAGATTCATCCAGTACCTCTGCAACACAGGCTGAAAAGGAGGAAGTAGATTCTCGATCTGTATATGTTGGTAATGTCGACTATGCATGCACTCCTGAAGAGGTCCAACAGCATTTTCAATCATGTGGGACAGTGAATAGAGTGACAATTTTGACGGACAAATTTGGTCACCCCAAGGGATTTGCTTATGTTGAGTTTGTGGAGGTTGATGCTGTCCAGAATGCTTTGCTGTTAAATGAGTCAGAGTTGCACGGTCGTCAACTTAAGGTCTCTGCTAAAAGGACAAATGTGCCGGGCATGAAGCAATACCGCGGAAGGAGGCCAAACCCTTTTGGCTTTCGAGGTCGCCGGCCTTTCACGCCTACTGCACCTTATCCTTCATATGGTTATGGAAGGGTCCCAAGGTTCAGGCGACCGATGCGGTACAGACCCTACTAG

Protein sequence

MERNYNYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPFGFRGRRPFTPTAPYPSYGYGRVPRFRRPMRYRPY
Homology
[Close]
BLAST of IVF0027045 vs. ExPASy Swiss-Prot
Match: Q93VI4 (Polyadenylate-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=PABN1 PE=1 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 4.9e-80
Identity = 167/231 (72.29%), Postives = 187/231 (80.95%), Query Frame = 0 

Query: 7   YDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDA-----EPSNANSKDLEDMKRRLK 66
           +DE EHEVYGG+IP++ E + D +       EEG  A     EP  ++S+DLEDMK+R+K
Sbjct: 4   HDEQEHEVYGGEIPEEEEGEMDTEEYEEHGGEEGAAAGDEELEP-GSSSRDLEDMKKRIK 63

Query: 67  EIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQ 126
           EIEEEAGALREMQAK EK+MGA Q+ S   SA  AEKEEVDSRS+YVGNVDYACTPEEVQ
Sbjct: 64  EIEEEAGALREMQAKAEKDMGASQDPSGGVSA--AEKEEVDSRSIYVGNVDYACTPEEVQ 123

Query: 127 QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTN 186
           QHFQSCGTVNRVTILTDKFG PKGFAYVEFVEV+AVQN+L+LNESELHGRQ+KVSAKRTN
Sbjct: 124 QHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQNSLILNESELHGRQIKVSAKRTN 183

Query: 187 VPGMKQYRGR-RPNPFGFRGRRPFTPTAP-YPSYGYGRVPRFRRPMRYRPY 231
           VPGM+Q+RGR RP    FR  R F P  P YP Y YGRVPRFRRPMRYRPY
Sbjct: 184 VPGMRQFRGRGRP----FRPMRGFMPGVPFYPPYAYGRVPRFRRPMRYRPY 227

[Close]
BLAST of IVF0027045 vs. ExPASy Swiss-Prot
Match: Q9FJN9 (Polyadenylate-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=PABN2 PE=1 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 4.3e-76
Identity = 155/224 (69.20%), Postives = 180/224 (80.36%), Query Frame = 0 

Query: 8   DEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEA 67
           +E EHEVYGG+IPD  EMD D++  +   D    D +      K+L++MK+RLKE+E+EA
Sbjct: 2   EEEEHEVYGGEIPDVGEMDGDMEALNPDLDMAAADDDA----VKELDEMKKRLKEMEDEA 61

Query: 68  GALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSC 127
            ALREMQAKVEKEMGA  +D +S +A QA KEEVD+RSV+VGNVDYACTPEEVQQHFQ+C
Sbjct: 62  AALREMQAKVEKEMGA--QDPASIAANQAGKEEVDARSVFVGNVDYACTPEEVQQHFQTC 121

Query: 128 GTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQ 187
           GTV+RVTILTDKFG PKGFAYVEFVEV+AVQ AL LNESELHGRQLKV  KRTNVPG+KQ
Sbjct: 122 GTVHRVTILTDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVLQKRTNVPGLKQ 181

Query: 188 YRGRRPNPF-GFRGRRPFTPTAPYPSYGYGRVPRFRRPMRYRPY 231
           +RGRR NP+ G+R RRPF     Y  YGYG+ PRFRRPMRY PY
Sbjct: 182 FRGRRFNPYMGYRFRRPFMSPYMYSPYGYGKAPRFRRPMRYMPY 219

[Close]
BLAST of IVF0027045 vs. ExPASy Swiss-Prot
Match: Q9LX90 (Polyadenylate-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=PABN3 PE=1 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 9.0e-74
Identity = 158/227 (69.60%), Postives = 175/227 (77.09%), Query Frame = 0 

Query: 8   DEHEHEVYGGDIPDDAEMDA---DLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIE 67
           +E EHEVYGG+IP+  + D    D+DMS+  ADE+            +L +MKRRLKE+E
Sbjct: 2   EEEEHEVYGGEIPEVGDTDVPDPDIDMSA--ADEDAV---------TELAEMKRRLKEME 61

Query: 68  EEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHF 127
           EEA ALREMQAKVEKEMGA Q D +S +A Q  KEEVD+RSVYVGNVDYACTPEEVQ HF
Sbjct: 62  EEAAALREMQAKVEKEMGATQ-DPASMAANQEGKEEVDARSVYVGNVDYACTPEEVQLHF 121

Query: 128 QSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPG 187
           Q+CGTVNRVTIL DKFG PKGFAYVEFVEV+AVQ AL LNESELHGRQLKVS KRTNVPG
Sbjct: 122 QTCGTVNRVTILMDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVSPKRTNVPG 181

Query: 188 MKQYRGRRPNP-FGFRGRRPFTPTAPYPSYGYGRVPRFRRPMRYRPY 231
           MKQY   R NP  G+R RRPF P   Y  YGYG+ PRFRRPMRY PY
Sbjct: 182 MKQYHPGRFNPSMGYRFRRPFVPPYFYSPYGYGKAPRFRRPMRYMPY 216

[Close]
BLAST of IVF0027045 vs. ExPASy Swiss-Prot
Match: O14327 (Polyadenylate-binding protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pab2 PE=1 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 5.7e-36
Identity = 92/173 (53.18%), Postives = 113/173 (65.32%), Query Frame = 0 

Query: 42  DAEPSNANSKDLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEV 101
           D +  +   K+L +MK R+ E+E EA  LR MQ +++ E          T A + +KE +
Sbjct: 3   DQDALDTQEKELLEMKERVAEMEAEAAKLRAMQEQLDNE----------TEALRNDKESI 62

Query: 102 DSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GHPKGFAYVEFVEVDAVQNA 161
           D++SVYVGNVDY+ TPEE+Q HF SCG+VNRVTIL DKF GHPKGFAY+EF E   V NA
Sbjct: 63  DAQSVYVGNVDYSVTPEELQSHFASCGSVNRVTILCDKFTGHPKGFAYIEFSEPSLVPNA 122

Query: 162 LLLNESELHGRQLKVSAKRTNVPGMK------QYRGRRPNPFGFRGR-RPFTP 207
           LLLN S LH R LKV+ KRTNVPGM       + RGR     G+RGR R F P
Sbjct: 123 LLLNGSMLHERPLKVTPKRTNVPGMSRGRGRGRGRGRGRGRGGYRGRARGFAP 165

[Close]
BLAST of IVF0027045 vs. ExPASy Swiss-Prot
Match: Q28165 (Polyadenylate-binding protein 2 OS=Bos taurus OX=9913 GN=PABPN1 PE=1 SV=3)

HSP 1 Score: 134.4 bits (337), Expect = 1.6e-30
Identity = 78/162 (48.15%), Postives = 105/162 (64.81%), Query Frame = 0 

Query: 52  DLEDMKRRLKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQA--EKEEVDSRSVYVG 111
           +LE +K R++E+EEEA  L+E+Q +VEK+M       ++     +  EK E D+RS+YVG
Sbjct: 118 ELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARSIYVG 177

Query: 112 NVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GHPKGFAYVEFVEVDAVQNALLLNESEL 171
           NVDY  T EE++ HF  CG+VNRVTIL DKF GHPKGFAY+EF + ++V+ +L L+ES  
Sbjct: 178 NVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLF 237

Query: 172 HGRQLKVSAKRTNVPGMK---------QYRGRRPNPFGFRGR 202
            GRQ+KV  KRTN PG+          +YR R  N    R R
Sbjct: 238 RGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTNYNSSRSR 279

[Close]
BLAST of IVF0027045 vs. ExPASy TrEMBL
Match: A0A1S3BYF0 (polyadenylate-binding protein 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494443 PE=4 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 7.5e-124
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0 

Query: 1   MERNYNYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRL 60
           MERNYNYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRL
Sbjct: 1   MERNYNYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRL 60

Query: 61  KEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEV 120
           KEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEV
Sbjct: 61  KEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEV 120

Query: 121 QQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRT 180
           QQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRT
Sbjct: 121 QQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRT 180

Query: 181 NVPGMKQYRGRRPNPFGFRGRRPFTPTAPYPSYGYGRVPRFRRPMRYRPY 231
           NVPGMKQYRGRRPNPFGFRGRRPFTPTAPYPSYGYGRVPRFRRPMRYRPY
Sbjct: 181 NVPGMKQYRGRRPNPFGFRGRRPFTPTAPYPSYGYGRVPRFRRPMRYRPY 230

[Close]
BLAST of IVF0027045 vs. ExPASy TrEMBL
Match: A0A1S3BWP8 (polyadenylate-binding protein 2-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494443 PE=4 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 5.4e-122
Identity = 229/230 (99.57%), Postives = 229/230 (99.57%), Query Frame = 0 

Query: 1   MERNYNYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRL 60
           MERNYNYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRL
Sbjct: 1   MERNYNYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRL 60

Query: 61  KEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEV 120
           KEIEEEAGALREMQAKVEKEMGAVQ DSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEV
Sbjct: 61  KEIEEEAGALREMQAKVEKEMGAVQ-DSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEV 120

Query: 121 QQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRT 180
           QQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRT
Sbjct: 121 QQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRT 180

Query: 181 NVPGMKQYRGRRPNPFGFRGRRPFTPTAPYPSYGYGRVPRFRRPMRYRPY 231
           NVPGMKQYRGRRPNPFGFRGRRPFTPTAPYPSYGYGRVPRFRRPMRYRPY
Sbjct: 181 NVPGMKQYRGRRPNPFGFRGRRPFTPTAPYPSYGYGRVPRFRRPMRYRPY 229

[Close]
BLAST of IVF0027045 vs. ExPASy TrEMBL
Match: A0A0A0KXP6 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G025170 PE=4 SV=1)

HSP 1 Score: 441.4 bits (1134), Expect = 2.3e-120
Identity = 226/230 (98.26%), Postives = 228/230 (99.13%), Query Frame = 0 

Query: 1   MERNYNYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRL 60
           MERNY+YDEHEHEVYGGDIPDDAE+DADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRL
Sbjct: 1   MERNYSYDEHEHEVYGGDIPDDAELDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRL 60

Query: 61  KEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEV 120
           KEIEEEAGALREMQAKVEKEMGAVQ DSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEV
Sbjct: 61  KEIEEEAGALREMQAKVEKEMGAVQ-DSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEV 120

Query: 121 QQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRT 180
           QQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRT
Sbjct: 121 QQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRT 180

Query: 181 NVPGMKQYRGRRPNPFGFRGRRPFTPTAPYPSYGYGRVPRFRRPMRYRPY 231
           NVPGMKQYRGRRPNPFGFRGRRPF PTAPYPSYGYGRVPRFRRPMRYRPY
Sbjct: 181 NVPGMKQYRGRRPNPFGFRGRRPFIPTAPYPSYGYGRVPRFRRPMRYRPY 229

[Close]
BLAST of IVF0027045 vs. ExPASy TrEMBL
Match: A0A6J1FT42 (polyadenylate-binding protein 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447055 PE=4 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 1.2e-116
Identity = 222/232 (95.69%), Postives = 226/232 (97.41%), Query Frame = 0 

Query: 1   MERNYNYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGY-DAEPSNANSKDLEDMKRR 60
           ME N+NYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGY DAEP+NANSKDLEDMKRR
Sbjct: 1   MEHNFNYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDDAEPTNANSKDLEDMKRR 60

Query: 61  LKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEE 120
           LKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVD+RSVYVGNVDYACTPEE
Sbjct: 61  LKEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDARSVYVGNVDYACTPEE 120

Query: 121 VQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKR 180
           VQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKR
Sbjct: 121 VQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKR 180

Query: 181 TNVPGMKQYRGRRPNPFGFRGRRPFTPTAP-YPSYGYGRVPRFRRPMRYRPY 231
           TNVPGMKQYRGRRPNP+GFRGRRPF   AP YPSYGYGRVPRFRRPMRYRPY
Sbjct: 181 TNVPGMKQYRGRRPNPYGFRGRRPFMADAPFYPSYGYGRVPRFRRPMRYRPY 232

[Close]
BLAST of IVF0027045 vs. ExPASy TrEMBL
Match: A0A6J1J6L4 (polyadenylate-binding protein 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483042 PE=4 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 2.6e-116
Identity = 218/231 (94.37%), Postives = 226/231 (97.84%), Query Frame = 0 

Query: 1   MERNYNYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRL 60
           M+RN+NYDEH+HEVYGGDIPDDAEMDADLDMSSGRADEE YDAEPS+ANSKDLEDMKRRL
Sbjct: 1   MDRNFNYDEHDHEVYGGDIPDDAEMDADLDMSSGRADEEDYDAEPSSANSKDLEDMKRRL 60

Query: 61  KEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEV 120
           KEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEE DSRSVYVGNVDYACTPEEV
Sbjct: 61  KEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEADSRSVYVGNVDYACTPEEV 120

Query: 121 QQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRT 180
           QQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDA+QNALLLNESELHGRQLKVSAKRT
Sbjct: 121 QQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAIQNALLLNESELHGRQLKVSAKRT 180

Query: 181 NVPGMKQYRGRRPNPFGFRGRRPFTPTAPY-PSYGYGRVPRFRRPMRYRPY 231
           NVPGMKQ+RGRRPN FGFRGRRPF P+AP+ PSYGYGRVPRFRRPMRYRPY
Sbjct: 181 NVPGMKQFRGRRPNSFGFRGRRPFIPSAPFPPSYGYGRVPRFRRPMRYRPY 231

[Close]
BLAST of IVF0027045 vs. NCBI nr
Match: XP_008453839.1 (PREDICTED: polyadenylate-binding protein 1-like isoform X2 [Cucumis melo])

HSP 1 Score: 450 bits (1157), Expect = 2.77e-159
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0 

Query: 1   MERNYNYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRL 60
           MERNYNYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRL
Sbjct: 1   MERNYNYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRL 60

Query: 61  KEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEV 120
           KEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEV
Sbjct: 61  KEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEV 120

Query: 121 QQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRT 180
           QQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRT
Sbjct: 121 QQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRT 180

Query: 181 NVPGMKQYRGRRPNPFGFRGRRPFTPTAPYPSYGYGRVPRFRRPMRYRPY 230
           NVPGMKQYRGRRPNPFGFRGRRPFTPTAPYPSYGYGRVPRFRRPMRYRPY
Sbjct: 181 NVPGMKQYRGRRPNPFGFRGRRPFTPTAPYPSYGYGRVPRFRRPMRYRPY 230

[Close]
BLAST of IVF0027045 vs. NCBI nr
Match: XP_008453840.1 (PREDICTED: polyadenylate-binding protein 2-like isoform X1 [Cucumis melo])

HSP 1 Score: 444 bits (1141), Expect = 7.34e-157
Identity = 229/230 (99.57%), Postives = 229/230 (99.57%), Query Frame = 0 

Query: 1   MERNYNYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRL 60
           MERNYNYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRL
Sbjct: 1   MERNYNYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRL 60

Query: 61  KEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEV 120
           KEIEEEAGALREMQAKVEKEMGAVQ DSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEV
Sbjct: 61  KEIEEEAGALREMQAKVEKEMGAVQ-DSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEV 120

Query: 121 QQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRT 180
           QQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRT
Sbjct: 121 QQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRT 180

Query: 181 NVPGMKQYRGRRPNPFGFRGRRPFTPTAPYPSYGYGRVPRFRRPMRYRPY 230
           NVPGMKQYRGRRPNPFGFRGRRPFTPTAPYPSYGYGRVPRFRRPMRYRPY
Sbjct: 181 NVPGMKQYRGRRPNPFGFRGRRPFTPTAPYPSYGYGRVPRFRRPMRYRPY 229

[Close]
BLAST of IVF0027045 vs. NCBI nr
Match: XP_011653101.1 (polyadenylate-binding protein 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 444 bits (1143), Expect = 1.55e-156
Identity = 227/230 (98.70%), Postives = 229/230 (99.57%), Query Frame = 0 

Query: 1   MERNYNYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRL 60
           MERNY+YDEHEHEVYGGDIPDDAE+DADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRL
Sbjct: 40  MERNYSYDEHEHEVYGGDIPDDAELDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRL 99

Query: 61  KEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEV 120
           KEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEV
Sbjct: 100 KEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEV 159

Query: 121 QQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRT 180
           QQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRT
Sbjct: 160 QQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRT 219

Query: 181 NVPGMKQYRGRRPNPFGFRGRRPFTPTAPYPSYGYGRVPRFRRPMRYRPY 230
           NVPGMKQYRGRRPNPFGFRGRRPF PTAPYPSYGYGRVPRFRRPMRYRPY
Sbjct: 220 NVPGMKQYRGRRPNPFGFRGRRPFIPTAPYPSYGYGRVPRFRRPMRYRPY 269

[Close]
BLAST of IVF0027045 vs. NCBI nr
Match: XP_038876136.1 (polyadenylate-binding protein 1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 442 bits (1136), Expect = 4.40e-156
Identity = 226/230 (98.26%), Postives = 227/230 (98.70%), Query Frame = 0 

Query: 1   MERNYNYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRL 60
           ME N+NYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRL
Sbjct: 1   MESNFNYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRL 60

Query: 61  KEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEV 120
           KEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEV
Sbjct: 61  KEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEV 120

Query: 121 QQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRT 180
           QQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRT
Sbjct: 121 QQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRT 180

Query: 181 NVPGMKQYRGRRPNPFGFRGRRPFTPTAPYPSYGYGRVPRFRRPMRYRPY 230
           NVPGMKQYRGRRPNPFGFRGRRPF P APYPSYGYGRVPRFRRPMRYRPY
Sbjct: 181 NVPGMKQYRGRRPNPFGFRGRRPFMPAAPYPSYGYGRVPRFRRPMRYRPY 230

[Close]
BLAST of IVF0027045 vs. NCBI nr
Match: XP_004146890.2 (polyadenylate-binding protein 1 isoform X2 [Cucumis sativus] >KAE8649141.1 hypothetical protein Csa_015072 [Cucumis sativus])

HSP 1 Score: 438 bits (1127), Expect = 4.09e-154
Identity = 226/230 (98.26%), Postives = 228/230 (99.13%), Query Frame = 0 

Query: 1   MERNYNYDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRL 60
           MERNY+YDEHEHEVYGGDIPDDAE+DADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRL
Sbjct: 40  MERNYSYDEHEHEVYGGDIPDDAELDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRL 99

Query: 61  KEIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEV 120
           KEIEEEAGALREMQAKVEKEMGAVQ DSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEV
Sbjct: 100 KEIEEEAGALREMQAKVEKEMGAVQ-DSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEV 159

Query: 121 QQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRT 180
           QQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRT
Sbjct: 160 QQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRT 219

Query: 181 NVPGMKQYRGRRPNPFGFRGRRPFTPTAPYPSYGYGRVPRFRRPMRYRPY 230
           NVPGMKQYRGRRPNPFGFRGRRPF PTAPYPSYGYGRVPRFRRPMRYRPY
Sbjct: 220 NVPGMKQYRGRRPNPFGFRGRRPFIPTAPYPSYGYGRVPRFRRPMRYRPY 268

[Close]
BLAST of IVF0027045 vs. TAIR 10
Match: AT5G51120.1 (polyadenylate-binding protein 1 )

HSP 1 Score: 298.9 bits (764), Expect = 3.5e-81
Identity = 167/231 (72.29%), Postives = 187/231 (80.95%), Query Frame = 0 

Query: 7   YDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDA-----EPSNANSKDLEDMKRRLK 66
           +DE EHEVYGG+IP++ E + D +       EEG  A     EP  ++S+DLEDMK+R+K
Sbjct: 4   HDEQEHEVYGGEIPEEEEGEMDTEEYEEHGGEEGAAAGDEELEP-GSSSRDLEDMKKRIK 63

Query: 67  EIEEEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQ 126
           EIEEEAGALREMQAK EK+MGA Q+ S   SA  AEKEEVDSRS+YVGNVDYACTPEEVQ
Sbjct: 64  EIEEEAGALREMQAKAEKDMGASQDPSGGVSA--AEKEEVDSRSIYVGNVDYACTPEEVQ 123

Query: 127 QHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTN 186
           QHFQSCGTVNRVTILTDKFG PKGFAYVEFVEV+AVQN+L+LNESELHGRQ+KVSAKRTN
Sbjct: 124 QHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQNSLILNESELHGRQIKVSAKRTN 183

Query: 187 VPGMKQYRGR-RPNPFGFRGRRPFTPTAP-YPSYGYGRVPRFRRPMRYRPY 231
           VPGM+Q+RGR RP    FR  R F P  P YP Y YGRVPRFRRPMRYRPY
Sbjct: 184 VPGMRQFRGRGRP----FRPMRGFMPGVPFYPPYAYGRVPRFRRPMRYRPY 227

[Close]
BLAST of IVF0027045 vs. TAIR 10
Match: AT5G65260.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 285.8 bits (730), Expect = 3.1e-77
Identity = 155/224 (69.20%), Postives = 180/224 (80.36%), Query Frame = 0 

Query: 8   DEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEA 67
           +E EHEVYGG+IPD  EMD D++  +   D    D +      K+L++MK+RLKE+E+EA
Sbjct: 2   EEEEHEVYGGEIPDVGEMDGDMEALNPDLDMAAADDDA----VKELDEMKKRLKEMEDEA 61

Query: 68  GALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSC 127
            ALREMQAKVEKEMGA  +D +S +A QA KEEVD+RSV+VGNVDYACTPEEVQQHFQ+C
Sbjct: 62  AALREMQAKVEKEMGA--QDPASIAANQAGKEEVDARSVFVGNVDYACTPEEVQQHFQTC 121

Query: 128 GTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQ 187
           GTV+RVTILTDKFG PKGFAYVEFVEV+AVQ AL LNESELHGRQLKV  KRTNVPG+KQ
Sbjct: 122 GTVHRVTILTDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVLQKRTNVPGLKQ 181

Query: 188 YRGRRPNPF-GFRGRRPFTPTAPYPSYGYGRVPRFRRPMRYRPY 231
           +RGRR NP+ G+R RRPF     Y  YGYG+ PRFRRPMRY PY
Sbjct: 182 FRGRRFNPYMGYRFRRPFMSPYMYSPYGYGKAPRFRRPMRYMPY 219

[Close]
BLAST of IVF0027045 vs. TAIR 10
Match: AT5G51120.2 (polyadenylate-binding protein 1 )

HSP 1 Score: 280.8 bits (717), Expect = 9.9e-76
Identity = 164/267 (61.42%), Postives = 188/267 (70.41%), Query Frame = 0 

Query: 7   YDEHEHEVYGGDIPDDAEMDADLDMSSGRADEEGYDA-----EPSNANSKDLEDMKRRLK 66
           +DE EHEVYGG+IP++ E + D +       EEG  A     EP  ++S+DLEDMK+R+K
Sbjct: 4   HDEQEHEVYGGEIPEEEEGEMDTEEYEEHGGEEGAAAGDEELEP-GSSSRDLEDMKKRIK 63

Query: 67  EIEEEAGALREMQAKVEKEMGAVQ------------------------------------ 126
           EIEEEAGALREMQAK EK+MGA Q                                    
Sbjct: 64  EIEEEAGALREMQAKAEKDMGASQGLKLVLLIMILLWVYILESFSESMNLSRNLLEFEYE 123

Query: 127 EDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKG 186
           ++  ++  + AEKEEVDSRS+YVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG PKG
Sbjct: 124 KEIINSGVSAAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKG 183

Query: 187 FAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGR-RPNPFGFRGRRPF 231
           FAYVEFVEV+AVQN+L+LNESELHGRQ+KVSAKRTNVPGM+Q+RGR RP    FR  R F
Sbjct: 184 FAYVEFVEVEAVQNSLILNESELHGRQIKVSAKRTNVPGMRQFRGRGRP----FRPMRGF 243

[Close]
BLAST of IVF0027045 vs. TAIR 10
Match: AT5G10350.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 278.1 bits (710), Expect = 6.4e-75
Identity = 158/227 (69.60%), Postives = 175/227 (77.09%), Query Frame = 0 

Query: 8   DEHEHEVYGGDIPDDAEMDA---DLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIE 67
           +E EHEVYGG+IP+  + D    D+DMS+  ADE+            +L +MKRRLKE+E
Sbjct: 2   EEEEHEVYGGEIPEVGDTDVPDPDIDMSA--ADEDAV---------TELAEMKRRLKEME 61

Query: 68  EEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHF 127
           EEA ALREMQAKVEKEMGA Q D +S +A Q  KEEVD+RSVYVGNVDYACTPEEVQ HF
Sbjct: 62  EEAAALREMQAKVEKEMGATQ-DPASMAANQEGKEEVDARSVYVGNVDYACTPEEVQLHF 121

Query: 128 QSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPG 187
           Q+CGTVNRVTIL DKFG PKGFAYVEFVEV+AVQ AL LNESELHGRQLKVS KRTNVPG
Sbjct: 122 QTCGTVNRVTILMDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVSPKRTNVPG 181

Query: 188 MKQYRGRRPNP-FGFRGRRPFTPTAPYPSYGYGRVPRFRRPMRYRPY 231
           MKQY   R NP  G+R RRPF P   Y  YGYG+ PRFRRPMRY PY
Sbjct: 182 MKQYHPGRFNPSMGYRFRRPFVPPYFYSPYGYGKAPRFRRPMRYMPY 216

[Close]
BLAST of IVF0027045 vs. TAIR 10
Match: AT5G10350.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 255.0 bits (650), Expect = 5.8e-68
Identity = 147/213 (69.01%), Postives = 163/213 (76.53%), Query Frame = 0 

Query: 8   DEHEHEVYGGDIPDDAEMDA---DLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIE 67
           +E EHEVYGG+IP+  + D    D+DMS+  ADE+            +L +MKRRLKE+E
Sbjct: 2   EEEEHEVYGGEIPEVGDTDVPDPDIDMSA--ADEDAV---------TELAEMKRRLKEME 61

Query: 68  EEAGALREMQAKVEKEMGAVQEDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHF 127
           EEA ALREMQAKVEKEMGA Q D +S +A Q  KEEVD+RSVYVGNVDYACTPEEVQ HF
Sbjct: 62  EEAAALREMQAKVEKEMGATQ-DPASMAANQEGKEEVDARSVYVGNVDYACTPEEVQLHF 121

Query: 128 QSCGTVNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPG 187
           Q+CGTVNRVTIL DKFG PKGFAYVEFVEV+AVQ AL LNESELHGRQLKVS KRTNVPG
Sbjct: 122 QTCGTVNRVTILMDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVSPKRTNVPG 181

Query: 188 MKQYRGRRPNP-FGFRGRRPFTPTAPYPSYGYG 217
           MKQY   R NP  G+R RRPF P   Y  YGYG
Sbjct: 182 MKQYHPGRFNPSMGYRFRRPFVPPYFYSPYGYG 202

The following BLAST results are available for this feature:
BLAST of IVF0027045 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q93VI44.9e-8072.29Polyadenylate-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=PABN1 PE=1 SV... [more]
Q9FJN94.3e-7669.20Polyadenylate-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=PABN2 PE=1 SV... [more]
Q9LX909.0e-7469.60Polyadenylate-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=PABN3 PE=1 SV... [more]
O143275.7e-3653.18Polyadenylate-binding protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC ... [more]
Q281651.6e-3048.15Polyadenylate-binding protein 2 OS=Bos taurus OX=9913 GN=PABPN1 PE=1 SV=3[more]
BLAST of IVF0027045 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BYF07.5e-124100.00polyadenylate-binding protein 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3BWP85.4e-12299.57polyadenylate-binding protein 2-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A0A0KXP62.3e-12098.26RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G025170 PE=4 SV... [more]
A0A6J1FT421.2e-11695.69polyadenylate-binding protein 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1J6L42.6e-11694.37polyadenylate-binding protein 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
BLAST of IVF0027045 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008453839.12.77e-159100.00PREDICTED: polyadenylate-binding protein 1-like isoform X2 [Cucumis melo][more]
XP_008453840.17.34e-15799.57PREDICTED: polyadenylate-binding protein 2-like isoform X1 [Cucumis melo][more]
XP_011653101.11.55e-15698.70polyadenylate-binding protein 1 isoform X1 [Cucumis sativus][more]
XP_038876136.14.40e-15698.26polyadenylate-binding protein 1-like isoform X1 [Benincasa hispida][more]
XP_004146890.24.09e-15498.26polyadenylate-binding protein 1 isoform X2 [Cucumis sativus] >KAE8649141.1 hypot... [more]
BLAST of IVF0027045 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G51120.13.5e-8172.29polyadenylate-binding protein 1 [more]
AT5G65260.13.1e-7769.20RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT5G51120.29.9e-7661.42polyadenylate-binding protein 1 [more]
AT5G10350.16.4e-7569.60RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT5G10350.25.8e-6869.01RNA-binding (RRM/RBD/RNP motifs) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 46..80
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..19
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..83
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..102
NoneNo IPR availablePANTHERPTHR23236:SF75POLYADENYLATE-BINDING PROTEIN 1-LIKEcoord: 7..229
NoneNo IPR availablePANTHERPTHR23236EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4Hcoord: 7..229
NoneNo IPR availableCDDcd12306RRM_II_PABPscoord: 105..176
e-value: 6.86515E-50
score: 155.527
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 105..176
e-value: 4.4E-22
score: 89.4
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 106..174
e-value: 3.4E-16
score: 58.8
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 104..180
score: 16.773018
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 43..177
e-value: 1.9E-28
score: 101.2
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 92..204

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0027045.1IVF0027045.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003723 RNA binding
molecular_function GO:0003676 nucleic acid binding