IVF0026957 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACATATTGCGAGGACGTTGATGACGTGGACGAGGGGGACTCCACGTACGCGACGACCACCGCTTCAGAAGACATTCACTACATTGAGACAACAAACGAGTGGTCTCAGTGGCGCGACGAACTAGTCGAATCGATGTTCACCGATTGGCAGTTGCATAATGCTTAG ATGACATATTGCGAGGACGTTGATGACGTGGACGAGGGGGACTCCACGTACGCGACGACCACCGCTTCAGAAGACATTCACTACATTGAGACAACAAACGAGTGGTCTCAGTGGCGCGACGAACTAGTCGAATCGATGTTCACCGATTGGCAGTTGCATAATGCTTAG ATGACATATTGCGAGGACGTTGATGACGTGGACGAGGGGGACTCCACGTACGCGACGACCACCGCTTCAGAAGACATTCACTACATTGAGACAACAAACGAGTGGTCTCAGTGGCGCGACGAACTAGTCGAATCGATGTTCACCGATTGGCAGTTGCATAATGCTTAG MTYCEDVDDVDEGDSTYATTTASEDIHYIETTNEWSQWRDELVESMFTDWQLHNA Homology
BLAST of IVF0026957 vs. ExPASy TrEMBL
Match: A0A5A7VK86 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001570 PE=3 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 8.1e-24 Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of IVF0026957 vs. ExPASy TrEMBL
Match: A0A5D3BDZ0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00280 PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 2.2e-21 Identity = 50/55 (90.91%), Postives = 52/55 (94.55%), Query Frame = 0
BLAST of IVF0026957 vs. ExPASy TrEMBL
Match: A0A5A7VDR4 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold827G00940 PE=3 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 2.9e-21 Identity = 51/55 (92.73%), Postives = 53/55 (96.36%), Query Frame = 0
BLAST of IVF0026957 vs. ExPASy TrEMBL
Match: A0A5D3CUG9 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold363G00180 PE=3 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 2.9e-21 Identity = 51/55 (92.73%), Postives = 52/55 (94.55%), Query Frame = 0
BLAST of IVF0026957 vs. ExPASy TrEMBL
Match: A0A5D3BAK8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold19391G00020 PE=3 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 2.9e-21 Identity = 51/55 (92.73%), Postives = 53/55 (96.36%), Query Frame = 0
BLAST of IVF0026957 vs. NCBI nr
Match: KAA0066806.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK27953.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 117 bits (294), Expect = 1.67e-30 Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of IVF0026957 vs. NCBI nr
Match: KAA0054051.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYJ96871.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 109 bits (273), Expect = 4.37e-30 Identity = 50/55 (90.91%), Postives = 52/55 (94.55%), Query Frame = 0
BLAST of IVF0026957 vs. NCBI nr
Match: TYK07212.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 108 bits (271), Expect = 7.14e-28 Identity = 50/55 (90.91%), Postives = 53/55 (96.36%), Query Frame = 0
BLAST of IVF0026957 vs. NCBI nr
Match: TYK05336.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 105 bits (262), Expect = 8.81e-28 Identity = 49/55 (89.09%), Postives = 51/55 (92.73%), Query Frame = 0
BLAST of IVF0026957 vs. NCBI nr
Match: TYJ95515.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 109 bits (272), Expect = 1.80e-27 Identity = 51/55 (92.73%), Postives = 53/55 (96.36%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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