IVF0026930 (gene) Melon (IVF77) v1

Overview


Name	IVF0026930
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	ribosomal RNA large subunit methyltransferase E
Location	chr09: 4826348 .. 4827845 (-)
RNA-Seq Expression	IVF0026930
Synteny	IVF0026930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGGAGCAGGAGCACCCGATTTCTTCTACAGAGAGGCTCAACGCCTTGGCTATGTTGCAAGATCCGCCTTCAAGGTATAACCCTACTTCCCCCTCTCTGTTTTTCCTCCTCCTTCAAGCCCTCGCCAATCCTGTTTTTCTTCAGTTGCTTCAGATTCAGAACCAATTCAAATTGATTACTTCAGGCTCCTCCGTCTTGGACCTCGGTTGCGCTCCCGGTGCCTGGCTGCAGGTCTCATTTCTCCACCCTTCACCTCCATTCCCCTAACTTTTCGTTTCACATATAAATTTCTGTTGCTTCTAGGTAGCTTGCCAGAGTCTGGGGCCTCCCAGAAATGGAGGCTCGGTTTTGGGTATTGATATCAAGGTGAATCTTTACCTTCTTCTGGGTTACTTAATTAGGCTGAATCTTATTTATCAGAAAGTTTTAATTTGTTATAGAAAATATTGGTCTTGCAGAACAGAAGGTAAAGGTTCCTCATGTGCATTGTGATTCAAGGGTACAAACTGTTTGTGCTGATGTTATGAACCTTCCCAAAAGCAAATTGAAGTCACTATCCCCTAAGGTAGTATTAACATTGAATGTTGTATTAGTCTTGAATATAGAGCTCAATTGGTAAATTGGTAATATTCCTGATCAAGAATGTTCTTTCTTTTGGTCTCTTCACGTTGAATGATGTTAAAATACTAGTATCAGTTAATAACTCAATCACTAGCATTCGGTGGAAGTGCAAGATTTGTGCAATGGTTTGGTTAAGGGTATACAATATTTGCTCTTTACCTTAGAAAATTAAAGTCGTTAGAAAAGAAAAAAGACCAGTCTATACACACGAGCATATGATGGAAGGGCAAGATTCGTGCAATAGTTTAGTTTAGGGGACACGGTATTTGCTCTTTACTTCAGAAATGGAAGTTGTTAAACAAAAAACAAAAAACATAAACATGGACAATGAGGAGTATGAAGAGAAGTTGCGTTGACTGGGGAAGATAAATTTGTGAGTTACACTGTCTAAGTCCTGTTTTTTGCTTGGTTTTTTAGGAGAAGGGATTTTCTGTAATACTCTCAGACATGTGCCCCATAGTATCTGGAATCACCACTAGAGATGCGGCATTATCAGTTGAATTGGGTATGCAAGCAGTTAATTTGGCACTCGGAGAAGCTGCGTTAGGTGTTGGAGAAGTTATACATGGAAAGGACAAGGATAGCATCGATGATTCAACTTCAGCTTCGGATTGTGATGGCGTGTTACGAAAAGGAGGCCACCTTGTTTTAAAACTATTGGAGAGTGAAGACACACAAGGTAGAATTTTATTTCCACAGCTGTTTTATACTTGGTTTTGCCTGCCTTCACAATCTTCCTTTATCTCAGAATTCAGTCGGATGTTGAAACCACTCTTCAGAAAGTCATCGTGGTTGAGGCCCAAGGCTACAAGATCGTCGTCAAGAGAGATTTATCTGATATGTCAAAGCTTGCAGTTGCAGGCAAGAACATAA

mRNA sequence

ATGAGTGGAGCAGGAGCACCCGATTTCTTCTACAGAGAGGCTCAACGCCTTGGCTATGTTGCAAGATCCGCCTTCAAGTTGCTTCAGATTCAGAACCAATTCAAATTGATTACTTCAGGCTCCTCCGTCTTGGACCTCGGTTGCGCTCCCGGTGCCTGGCTGCAGGTAGCTTGCCAGAGTCTGGGGCCTCCCAGAAATGGAGGCTCGGTTTTGGGTATTGATATCAAGAAGGTAAAGGTTCCTCATGTGCATTGTGATTCAAGGGTACAAACTGTTTGTGCTGATGTTATGAACCTTCCCAAAAGCAAATTGAAGTCACTATCCCCTAAGGAGAAGGGATTTTCTGTAATACTCTCAGACATGTGCCCCATAGTATCTGGAATCACCACTAGAGATGCGGCATTATCAGTTGAATTGGGTATGCAAGCAGTTAATTTGGCACTCGGAGAAGCTGCGTTAGGTGTTGGAGAAGTTATACATGGAAAGGACAAGGATAGCATCGATGATTCAACTTCAGCTTCGGATTGTGATGGCGTGTTACGAAAAGGAGGCCACCTTGTTTTAAAACTATTGGAGAGTGAAGACACACAAGAATTCAGTCGGATGTTGAAACCACTCTTCAGAAAGTCATCGTGGTTGAGGCCCAAGGCTACAAGATCGTCGTCAAGAGAGATTTATCTGATATGTCAAAGCTTGCAGTTGCAGGCAAGAACATAA

Coding sequence (CDS)

ATGAGTGGAGCAGGAGCACCCGATTTCTTCTACAGAGAGGCTCAACGCCTTGGCTATGTTGCAAGATCCGCCTTCAAGTTGCTTCAGATTCAGAACCAATTCAAATTGATTACTTCAGGCTCCTCCGTCTTGGACCTCGGTTGCGCTCCCGGTGCCTGGCTGCAGGTAGCTTGCCAGAGTCTGGGGCCTCCCAGAAATGGAGGCTCGGTTTTGGGTATTGATATCAAGAAGGTAAAGGTTCCTCATGTGCATTGTGATTCAAGGGTACAAACTGTTTGTGCTGATGTTATGAACCTTCCCAAAAGCAAATTGAAGTCACTATCCCCTAAGGAGAAGGGATTTTCTGTAATACTCTCAGACATGTGCCCCATAGTATCTGGAATCACCACTAGAGATGCGGCATTATCAGTTGAATTGGGTATGCAAGCAGTTAATTTGGCACTCGGAGAAGCTGCGTTAGGTGTTGGAGAAGTTATACATGGAAAGGACAAGGATAGCATCGATGATTCAACTTCAGCTTCGGATTGTGATGGCGTGTTACGAAAAGGAGGCCACCTTGTTTTAAAACTATTGGAGAGTGAAGACACACAAGAATTCAGTCGGATGTTGAAACCACTCTTCAGAAAGTCATCGTGGTTGAGGCCCAAGGCTACAAGATCGTCGTCAAGAGAGATTTATCTGATATGTCAAAGCTTGCAGTTGCAGGCAAGAACATAA

Protein sequence

MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQSLGPPRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKSKLKSLSPKEKGFSVILSDMCPIVSGITTRDAALSVELGMQAVNLALGEAALGVGEVIHGKDKDSIDDSTSASDCDGVLRKGGHLVLKLLESEDTQEFSRMLKPLFRKSSWLRPKATRSSSREIYLICQSLQLQART

Homology

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BLAST of IVF0026930 vs. ExPASy Swiss-Prot
Match: A8ZT18 (Ribosomal RNA large subunit methyltransferase E OS=Desulfococcus oleovorans (strain DSM 6200 / JCM 39069 / Hxd3) OX=96561 GN=rlmE PE=3 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 4.0e-24
Identity = 74/227 (32.60%), Postives = 111/227 (48.90%), Query Frame = 0


Query: 3   GAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQSLG 62
           G   PD + R+A+   Y ARS +KL +IQ +  ++  G++VLDLGC PG+W+  A +++G
Sbjct: 8   GRKTPDHYARKAKTEHYPARSVYKLQEIQKKHNVLKPGNAVLDLGCFPGSWMMFAAETVG 67

Query: 63  PPRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKSKLK-SLSPKEKGFSVILSDM 122
               GG V GID+KKV     H  ++  ++  D+  + +  L  +L P      V+LSDM
Sbjct: 68  ---RGGKVTGIDLKKVA---THMPAQATSLQEDIYEIDREALAGTLGP----LDVVLSDM 127

Query: 123 CPIVSGITTRDAALSVELGMQAVNLALGEAALGVGEVIHGKDKDSIDDSTSASDCDGVLR 182
            P   G    DAA S  L   A++LAL                              +L+
Sbjct: 128 APDTMGNKFTDAARSFHLAAAALDLAL-----------------------------FLLK 187

Query: 183 KGGHLVLKLLESEDTQEFSRMLKPLFRKSSWLRPKATRSSSREIYLI 229
            GGH V K+ + ED Q F  M+K  F +    +P+  R  S+E Y+I
Sbjct: 188 PGGHFVCKVFQGEDFQNFVNMVKAEFERHKVFKPETCRKDSKETYVI 195

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BLAST of IVF0026930 vs. ExPASy Swiss-Prot
Match: B8FL12 (Ribosomal RNA large subunit methyltransferase E OS=Desulfatibacillum aliphaticivorans OX=218208 GN=rlmE PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 7.5e-23
Identity = 73/221 (33.03%), Postives = 108/221 (48.87%), Query Frame = 0


Query: 8   DFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQSLGPPRNG 67
           D +  +AQ+ G+ ARS FKL ++Q ++K++  G  VLDLGCAPG+WL+ A Q +G   + 
Sbjct: 13  DHYTDKAQKAGFPARSVFKLEEMQKRWKILRPGQKVLDLGCAPGSWLKYASQIVG---DS 72

Query: 68  GSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKSKLKSLSPKEKGFSVILSDMCPIVSG 127
           G V+G+D+K +  P        Q +  D   L +  L  +    + F V+LSDM P  +G
Sbjct: 73  GRVIGLDLKPMDQPD---KPNAQFIQGDAFELTQEFLDEIG---RDFDVVLSDMAPNTTG 132

Query: 128 ITTRDAALSVELGMQAVNLALGEAALGVGEVIHGKDKDSIDDSTSASDCDGVLRKGGHLV 187
           I   DA  S          AL E+AL                         VL+ GG  V
Sbjct: 133 IKNVDALKSA---------ALCESALAAAVT--------------------VLKPGGSFV 192

Query: 188 LKLLESEDTQEFSRMLKPLFRKSSWLRPKATRSSSREIYLI 229
            K+ + E    F + +K  F K    +P++TR  SREIY++
Sbjct: 193 CKIFQGEGFDAFIKDVKKYFTKHKIFKPESTRKQSREIYVV 195

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BLAST of IVF0026930 vs. ExPASy Swiss-Prot
Match: B9LSX2 (Ribosomal RNA large subunit methyltransferase E OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) OX=416348 GN=rlmE PE=3 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.1e-21
Identity = 69/225 (30.67%), Postives = 110/225 (48.89%), Query Frame = 0


Query: 8   DFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQSLGPPRNG 67
           D +Y ++++ GY ARSA+KL QI  +  L   G +V+DLG APG WLQVA + +G     
Sbjct: 5   DEYYNKSKQQGYRARSAYKLKQIDEEANLFERGDTVVDLGAAPGGWLQVAAEEVG---ES 64

Query: 68  GSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKSKLKSLSPKEKGFSVILSDMCPIVSG 127
           G+V+G+D++++       D  V+T+  D+           +  E+G  V++SDM P ++G
Sbjct: 65  GTVVGVDLQRIDDLD---DHDVETIRGDMTEERTRHYLREAIGERGADVVISDMAPNMTG 124

Query: 128 ITTRDAALSVELGMQAVNLALGEAALGVGEVIHGKDKDSIDDSTSASDCDGVLRKGGHLV 187
               D A SV L  QA ++A                             + +L  GG  V
Sbjct: 125 EYALDHARSVHLARQAFDVA-----------------------------EELLAPGGDFV 184

Query: 188 LKLLESEDTQEFSRMLKPLFRKSSWLRPKATRSSSREIYLICQSL 233
           +K+ + ED   F   ++  F     + P A+R SS E+YL+ + L
Sbjct: 185 VKVFQGEDLDAFREDVRAEFEYLRTVSPPASRDSSSEVYLVAKGL 194

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BLAST of IVF0026930 vs. ExPASy Swiss-Prot
Match: A0LGZ0 (Ribosomal RNA large subunit methyltransferase E OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) OX=335543 GN=rlmE PE=3 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 7.0e-21
Identity = 74/229 (32.31%), Postives = 115/229 (50.22%), Query Frame = 0


Query: 8   DFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQSLGPPRNG 67
           D ++ +A++  Y+AR+ +KL +IQ+++K++  G+ VLDLG APG+W+Q A + +GP    
Sbjct: 7   DHYFHKAKKEHYLARAVYKLQEIQDRYKILKPGNRVLDLGAAPGSWMQFAREIVGP---S 66

Query: 68  GSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKSKLKSLSPKEKGFSVILSDMCPIVSG 127
           G V+G+D+K V+         V  +  DV +      +SLS +   F V+LSDM P  SG
Sbjct: 67  GLVVGVDLKGVE---HRFPEGVVVLQGDVTD--PELARSLSVEHGPFDVVLSDMAPSTSG 126

Query: 128 ITTRDAALSVELGMQAVNLALGEAALGVGEVIHGKDKDSIDDSTSASDCDGVLRKGGHLV 187
           I   D+A S  L   A+ +A                                LR GGH V
Sbjct: 127 IRVADSARSALLFESALEMA-----------------------------RSALRPGGHFV 186

Query: 188 LKLLESEDTQEFSRMLKPLFRKSSWL---RPKATRSSSREIYLICQSLQ 234
            KL +     EF  +L+ + R   W+   +P A+R  S+EIY+I   L+
Sbjct: 187 AKLFQG---AEFHVLLQAVKRDFEWVKVTKPDASRKQSKEIYVIGMRLR 195

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BLAST of IVF0026930 vs. ExPASy Swiss-Prot
Match: Q58771 (Ribosomal RNA large subunit methyltransferase E OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=rlmE PE=3 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.2e-20
Identity = 68/224 (30.36%), Postives = 114/224 (50.89%), Query Frame = 0


Query: 8   DFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQSLGPPRNG 67
           DF+Y+ A++L Y +R++FKL+Q+  +F +I  G  VLDLGCAPG W+QVA + +G   + 
Sbjct: 15  DFYYKLAKKLKYRSRASFKLMQLNEKFNVIKPGKIVLDLGCAPGGWMQVAREIVG---DK 74

Query: 68  GSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKSKLKSLSPK-EKGFSVILSDMCPIVS 127
           G V+GID++ VK      D+ V       +    +K++ L P  EK   V++SD  P +S
Sbjct: 75  GFVIGIDLQPVK--PFEYDNVVAIKGDFTLEENLNKIRELIPNDEKKVDVVISDASPNIS 134

Query: 128 GITTRDAALSVELGMQAVNLALGEAALGVGEVIHGKDKDSIDDSTSASDCDGVLRKGGHL 187
           G    D A S++L   A+ +A                               +L++ G+ 
Sbjct: 135 GYWDIDHARSIDLVTTALQIA-----------------------------TEMLKERGNF 194

Query: 188 VLKLLESEDTQEFSRMLKPLFRKSSWLRPKATRSSSREIYLICQ 231
           V K+   +   ++  ++K  F K    +P+A+R  S E+Y+I +
Sbjct: 195 VAKVFYGDMIDDYVNLVKKYFEKVYITKPQASRKESAEVYVIAK 204

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BLAST of IVF0026930 vs. ExPASy TrEMBL
Match: A0A1S3C9F1 (ribosomal RNA large subunit methyltransferase E isoform X3 OS=Cucumis melo OX=3656 GN=LOC103498139 PE=3 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 1.4e-128
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPPRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKSKLKSLSPKEKGFSVILSD 120
           LGPPRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKSKLKSLSPKEKGFSVILSD
Sbjct: 61  LGPPRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKSKLKSLSPKEKGFSVILSD 120

Query: 121 MCPIVSGITTRDAALSVELGMQAVNLALGEAALGVGEVIHGKDKDSIDDSTSASDCDGVL 180
           MCPIVSGITTRDAALSVELGMQAVNLALGEAALGVGEVIHGKDKDSIDDSTSASDCDGVL
Sbjct: 121 MCPIVSGITTRDAALSVELGMQAVNLALGEAALGVGEVIHGKDKDSIDDSTSASDCDGVL 180

Query: 181 RKGGHLVLKLLESEDTQEFSRMLKPLFRKSSWLRPKATRSSSREIYLICQSLQLQART 239
           RKGGHLVLKLLESEDTQEFSRMLKPLFRKSSWLRPKATRSSSREIYLICQSLQLQART
Sbjct: 181 RKGGHLVLKLLESEDTQEFSRMLKPLFRKSSWLRPKATRSSSREIYLICQSLQLQART 238

[Close]

BLAST of IVF0026930 vs. ExPASy TrEMBL
Match: A0A0A0KQZ0 (FtsJ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G517710 PE=3 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 5.4e-125
Identity = 230/238 (96.64%), Postives = 236/238 (99.16%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPPRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKSKLKSLSPKEKGFSVILSD 120
           LGPPRNGGSVLGIDIKKVKVPH+HCDSRVQTV ADVMNLPKSKLKSLSPKEKGFSVILSD
Sbjct: 61  LGPPRNGGSVLGIDIKKVKVPHMHCDSRVQTVSADVMNLPKSKLKSLSPKEKGFSVILSD 120

Query: 121 MCPIVSGITTRDAALSVELGMQAVNLALGEAALGVGEVIHGKDKDSIDDSTSASDCDGVL 180
           MCP+VSGITTRDAALSVELGMQAVNLALGEAALGVG+VIHGKDKDS+DDSTSASDCDGVL
Sbjct: 121 MCPLVSGITTRDAALSVELGMQAVNLALGEAALGVGDVIHGKDKDSVDDSTSASDCDGVL 180

Query: 181 RKGGHLVLKLLESEDTQEFSRMLKPLFRKSSWLRPKATRSSSREIYLICQSLQLQART 239
           R+GGHLVLKLLESEDTQEFSRMLKPLFRK+SWLRPKATRSSSREIYLICQSL LQART
Sbjct: 181 RQGGHLVLKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLHLQART 238

[Close]

BLAST of IVF0026930 vs. ExPASy TrEMBL
Match: A0A1S3C8U8 (ribosomal RNA large subunit methyltransferase E isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498139 PE=3 SV=1)

HSP 1 Score: 455.7 bits (1171), Expect = 1.2e-124
Identity = 238/261 (91.19%), Postives = 238/261 (91.19%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPPRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKSKLKSLSPKEKGFSVILSD 120
           LGPPRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKSKLKSLSPKEKGFSVILSD
Sbjct: 61  LGPPRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKSKLKSLSPKEKGFSVILSD 120

Query: 121 MCPIVSGITTRDAALSVELGMQAVNLALGEAALGVGEVIHGKDKDSIDDSTSASDCDGVL 180
           MCPIVSGITTRDAALSVELGMQAVNLALGEAALGVGEVIHGKDKDSIDDSTSASDCDGVL
Sbjct: 121 MCPIVSGITTRDAALSVELGMQAVNLALGEAALGVGEVIHGKDKDSIDDSTSASDCDGVL 180

Query: 181 RKGGHLVLKLLESEDTQ-----------------------EFSRMLKPLFRKSSWLRPKA 239
           RKGGHLVLKLLESEDTQ                       EFSRMLKPLFRKSSWLRPKA
Sbjct: 181 RKGGHLVLKLLESEDTQGRILFPQLFYTWFCLPSQSSFISEFSRMLKPLFRKSSWLRPKA 240

[Close]

BLAST of IVF0026930 vs. ExPASy TrEMBL
Match: A0A1S4E250 (ribosomal RNA large subunit methyltransferase E isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498139 PE=3 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 1.6e-121
Identity = 235/261 (90.04%), Postives = 235/261 (90.04%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFK   IQNQFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFK---IQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPPRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKSKLKSLSPKEKGFSVILSD 120
           LGPPRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKSKLKSLSPKEKGFSVILSD
Sbjct: 61  LGPPRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKSKLKSLSPKEKGFSVILSD 120

Query: 121 MCPIVSGITTRDAALSVELGMQAVNLALGEAALGVGEVIHGKDKDSIDDSTSASDCDGVL 180
           MCPIVSGITTRDAALSVELGMQAVNLALGEAALGVGEVIHGKDKDSIDDSTSASDCDGVL
Sbjct: 121 MCPIVSGITTRDAALSVELGMQAVNLALGEAALGVGEVIHGKDKDSIDDSTSASDCDGVL 180

Query: 181 RKGGHLVLKLLESEDTQ-----------------------EFSRMLKPLFRKSSWLRPKA 239
           RKGGHLVLKLLESEDTQ                       EFSRMLKPLFRKSSWLRPKA
Sbjct: 181 RKGGHLVLKLLESEDTQGRILFPQLFYTWFCLPSQSSFISEFSRMLKPLFRKSSWLRPKA 240

[Close]

BLAST of IVF0026930 vs. ExPASy TrEMBL
Match: A0A6J1H9J8 (uncharacterized protein LOC111461336 OS=Cucurbita moschata OX=3662 GN=LOC111461336 PE=3 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 5.2e-112
Identity = 210/239 (87.87%), Postives = 227/239 (94.98%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQ QFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPPRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKSKLKSLSPKEKGFSVILSD 120
           LGP +NGGSV+GID+KKVKVPHVHCDSRVQTVCADVMNLPK+KLK+LSPKEKGFSVILSD
Sbjct: 61  LGPLKNGGSVVGIDLKKVKVPHVHCDSRVQTVCADVMNLPKNKLKALSPKEKGFSVILSD 120

Query: 121 MCPIVSGITTRDAALSVELGMQAVNLALGEAALGVG-EVIHGKDK-DSIDDSTSASDCDG 180
           MCP+VSGITTRDA+LSVELGMQAVNLALGEAAL  G +V+HGK+K D++DDS   SD DG
Sbjct: 121 MCPLVSGITTRDASLSVELGMQAVNLALGEAALSHGDDVMHGKNKEDNVDDSALVSDYDG 180

Query: 181 VLRKGGHLVLKLLESEDTQEFSRMLKPLFRKSSWLRPKATRSSSREIYLICQSLQLQAR 238
           VL+KGGHLV+KLLESEDTQEFSRMLKPLFRK+SWLRPKATRSSSREIYLICQSLQ + +
Sbjct: 181 VLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLQAKTK 239

[Close]

BLAST of IVF0026930 vs. NCBI nr
Match: XP_008458862.1 (PREDICTED: ribosomal RNA large subunit methyltransferase E isoform X3 [Cucumis melo])

HSP 1 Score: 470 bits (1209), Expect = 6.05e-167
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPPRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKSKLKSLSPKEKGFSVILSD 120
           LGPPRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKSKLKSLSPKEKGFSVILSD
Sbjct: 61  LGPPRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKSKLKSLSPKEKGFSVILSD 120

Query: 121 MCPIVSGITTRDAALSVELGMQAVNLALGEAALGVGEVIHGKDKDSIDDSTSASDCDGVL 180
           MCPIVSGITTRDAALSVELGMQAVNLALGEAALGVGEVIHGKDKDSIDDSTSASDCDGVL
Sbjct: 121 MCPIVSGITTRDAALSVELGMQAVNLALGEAALGVGEVIHGKDKDSIDDSTSASDCDGVL 180

Query: 181 RKGGHLVLKLLESEDTQEFSRMLKPLFRKSSWLRPKATRSSSREIYLICQSLQLQART 238
           RKGGHLVLKLLESEDTQEFSRMLKPLFRKSSWLRPKATRSSSREIYLICQSLQLQART
Sbjct: 181 RKGGHLVLKLLESEDTQEFSRMLKPLFRKSSWLRPKATRSSSREIYLICQSLQLQART 238

[Close]

BLAST of IVF0026930 vs. NCBI nr
Match: XP_004142767.1 (uncharacterized protein LOC101216412 isoform X2 [Cucumis sativus] >KGN51324.1 hypothetical protein Csa_007820 [Cucumis sativus])

HSP 1 Score: 458 bits (1178), Expect = 3.22e-162
Identity = 230/238 (96.64%), Postives = 236/238 (99.16%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPPRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKSKLKSLSPKEKGFSVILSD 120
           LGPPRNGGSVLGIDIKKVKVPH+HCDSRVQTV ADVMNLPKSKLKSLSPKEKGFSVILSD
Sbjct: 61  LGPPRNGGSVLGIDIKKVKVPHMHCDSRVQTVSADVMNLPKSKLKSLSPKEKGFSVILSD 120

Query: 121 MCPIVSGITTRDAALSVELGMQAVNLALGEAALGVGEVIHGKDKDSIDDSTSASDCDGVL 180
           MCP+VSGITTRDAALSVELGMQAVNLALGEAALGVG+VIHGKDKDS+DDSTSASDCDGVL
Sbjct: 121 MCPLVSGITTRDAALSVELGMQAVNLALGEAALGVGDVIHGKDKDSVDDSTSASDCDGVL 180

Query: 181 RKGGHLVLKLLESEDTQEFSRMLKPLFRKSSWLRPKATRSSSREIYLICQSLQLQART 238
           R+GGHLVLKLLESEDTQEFSRMLKPLFRK+SWLRPKATRSSSREIYLICQSL LQART
Sbjct: 181 RQGGHLVLKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLHLQART 238

[Close]

BLAST of IVF0026930 vs. NCBI nr
Match: XP_008458861.1 (PREDICTED: ribosomal RNA large subunit methyltransferase E isoform X1 [Cucumis melo])

HSP 1 Score: 457 bits (1175), Expect = 2.13e-161
Identity = 238/261 (91.19%), Postives = 238/261 (91.19%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPPRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKSKLKSLSPKEKGFSVILSD 120
           LGPPRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKSKLKSLSPKEKGFSVILSD
Sbjct: 61  LGPPRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKSKLKSLSPKEKGFSVILSD 120

Query: 121 MCPIVSGITTRDAALSVELGMQAVNLALGEAALGVGEVIHGKDKDSIDDSTSASDCDGVL 180
           MCPIVSGITTRDAALSVELGMQAVNLALGEAALGVGEVIHGKDKDSIDDSTSASDCDGVL
Sbjct: 121 MCPIVSGITTRDAALSVELGMQAVNLALGEAALGVGEVIHGKDKDSIDDSTSASDCDGVL 180

Query: 181 RKGGHLVLKLLESEDTQ-----------------------EFSRMLKPLFRKSSWLRPKA 238
           RKGGHLVLKLLESEDTQ                       EFSRMLKPLFRKSSWLRPKA
Sbjct: 181 RKGGHLVLKLLESEDTQGRILFPQLFYTWFCLPSQSSFISEFSRMLKPLFRKSSWLRPKA 240

[Close]

BLAST of IVF0026930 vs. NCBI nr
Match: XP_016902309.1 (PREDICTED: ribosomal RNA large subunit methyltransferase E isoform X2 [Cucumis melo])

HSP 1 Score: 446 bits (1148), Expect = 2.49e-157
Identity = 235/261 (90.04%), Postives = 235/261 (90.04%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFK   IQNQFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFK---IQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPPRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKSKLKSLSPKEKGFSVILSD 120
           LGPPRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKSKLKSLSPKEKGFSVILSD
Sbjct: 61  LGPPRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKSKLKSLSPKEKGFSVILSD 120

Query: 121 MCPIVSGITTRDAALSVELGMQAVNLALGEAALGVGEVIHGKDKDSIDDSTSASDCDGVL 180
           MCPIVSGITTRDAALSVELGMQAVNLALGEAALGVGEVIHGKDKDSIDDSTSASDCDGVL
Sbjct: 121 MCPIVSGITTRDAALSVELGMQAVNLALGEAALGVGEVIHGKDKDSIDDSTSASDCDGVL 180

Query: 181 RKGGHLVLKLLESEDTQ-----------------------EFSRMLKPLFRKSSWLRPKA 238
           RKGGHLVLKLLESEDTQ                       EFSRMLKPLFRKSSWLRPKA
Sbjct: 181 RKGGHLVLKLLESEDTQGRILFPQLFYTWFCLPSQSSFISEFSRMLKPLFRKSSWLRPKA 240

[Close]

BLAST of IVF0026930 vs. NCBI nr
Match: XP_038889598.1 (ribosomal RNA large subunit methyltransferase E isoform X1 [Benincasa hispida])

HSP 1 Score: 444 bits (1141), Expect = 1.31e-156
Identity = 224/238 (94.12%), Postives = 233/238 (97.90%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPPRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKSKLKSLSPKEKGFSVILSD 120
           LGPPRNGGSVLGID+KKVKVPHVHCDSRVQTVCADVMNLPK+KLKSLSPKEKGFSVILSD
Sbjct: 61  LGPPRNGGSVLGIDLKKVKVPHVHCDSRVQTVCADVMNLPKNKLKSLSPKEKGFSVILSD 120

Query: 121 MCPIVSGITTRDAALSVELGMQAVNLALGEAALGVGEVIHGKDKDSIDDSTSASDCDGVL 180
           MCP+VSGITTRDAALSVELGMQAVNLALGEAALGVG+VIHGKD D++DDSTS SDCDGVL
Sbjct: 121 MCPLVSGITTRDAALSVELGMQAVNLALGEAALGVGDVIHGKDNDNVDDSTSVSDCDGVL 180

Query: 181 RKGGHLVLKLLESEDTQEFSRMLKPLFRKSSWLRPKATRSSSREIYLICQSLQLQART 238
           R+GGHLV+KLLESEDTQEFSRMLKPLFRKSS LRPKATRSSSREIYLICQSL+  ART
Sbjct: 181 RQGGHLVIKLLESEDTQEFSRMLKPLFRKSSLLRPKATRSSSREIYLICQSLK--ART 236

[Close]

BLAST of IVF0026930 vs. TAIR 10
Match: AT5G13830.1 (FtsJ-like methyltransferase family protein )

HSP 1 Score: 317.0 bits (811), Expect = 1.3e-86
Identity = 163/233 (69.96%), Postives = 188/233 (80.69%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAG PDFFYREAQRLGYVARSAFKLLQIQ Q+KLI  GSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGVPDFFYREAQRLGYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPPRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKSKLKSLSPKEKGFSVILSD 120
           LGP R+GG V+G+DIKKVKVP   CDSRVQT+ ADV+N P+ K++ LSP++ GFSVILSD
Sbjct: 61  LGPLRSGGIVVGMDIKKVKVP-PQCDSRVQTIAADVLNFPRQKIRELSPQQLGFSVILSD 120

Query: 121 MCPIVSGITTRDAALSVELGMQAVNLALGEAALGVGEVIHGKDKDSIDDSTSASDCDGVL 180
           MC  VSGITTRDAALS ELGM+A++LA+G+AA+            + DD        GVL
Sbjct: 121 MCHSVSGITTRDAALSAELGMRALDLAVGQAAI--------SQSPNDDDGGPNESRPGVL 180

Query: 181 RKGGHLVLKLLESEDTQEFSRMLKPLFRKSSWLRPKATRSSSREIYLICQSLQ 234
           R GGHLV+KLLESED Q+F+R+ KP+F K+SWLRPKATR SSREIYLICQ  +
Sbjct: 181 RHGGHLVIKLLESEDAQDFARICKPIFNKASWLRPKATRPSSREIYLICQGFR 224

[Close]

BLAST of IVF0026930 vs. TAIR 10
Match: AT4G25730.1 (FtsJ-like methyltransferase family protein )

HSP 1 Score: 83.2 bits (204), Expect = 3.1e-16
Identity = 66/223 (29.60%), Postives = 103/223 (46.19%), Query Frame = 0


Query: 8   DFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQSLGPPRNG 67
           D +YR A+  G+ +R+++KLLQ+  ++ L+ S  +VLDL  APG W+QVA + +     G
Sbjct: 11  DKYYRLAKERGFRSRASYKLLQLDAKYSLLHSAHAVLDLCAAPGGWMQVAVEKVPV---G 70

Query: 68  GSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKSKLKSLSPKE--KGFSVILSDMCPIV 127
             VLGID+  + +P   C +  Q +        KSK+K +  +     F+++L D  P V
Sbjct: 71  SLVLGIDLVPI-LPVRGCVTMTQDITRTEC---KSKIKQVMEQHGVSAFNLVLHDGSPNV 130

Query: 128 SGITTRDAALSVELGMQAVNLALGEAALGVGEVIHGKDKDSIDDSTSASDCDGVLRKGGH 187
            G   ++A     L + +V LA                                L + G+
Sbjct: 131 GGAWAQEAMSQNALVIDSVRLA-----------------------------TEFLARNGN 190

Query: 188 LVLKLLESEDTQEFSRMLKPLFRKSSWLRPKATRSSSREIYLI 229
           LV K+  S D       L  LF K    +P A+RS+S E YL+
Sbjct: 191 LVTKVFRSRDYNSVLYCLGRLFEKVEVFKPPASRSASAETYLV 197

[Close]

BLAST of IVF0026930 vs. TAIR 10
Match: AT5G01230.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein )

HSP 1 Score: 74.7 bits (182), Expect = 1.1e-13
Identity = 58/233 (24.89%), Postives = 104/233 (44.64%), Query Frame = 0


Query: 8   DFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQSLGPPRNG 67
           D +YR+A+  G+ ARSAFKLLQI  +F +      V+DL  APG+W QV  + L  P   
Sbjct: 10  DIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRQLYLPAKS 69

Query: 68  GS---------VLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKSKLKSLSPKEKGFSVIL 127
            +         ++ ID++    P    +  +Q V  D+ N   +++           +++
Sbjct: 70  SAESKDGDLPLIVAIDLQ----PMAPIEGVIQ-VQGDITNARTAEVVIRHFDGCKADLVV 129

Query: 128 SDMCPIVSGITTRDAALSVELGMQAVNLALGEAALGVGEVIHGKDKDSIDDSTSASDCDG 187
            D  P V+G+   D  +  +L +  + +           V H                  
Sbjct: 130 CDGAPDVTGLHDMDEFVQSQLILAGLTI-----------VTH------------------ 189

Query: 188 VLRKGGHLVLKLLESEDTQEFSRMLKPLFRKSSWLRPKATRSSSREIYLICQS 232
           +L++GG  + K+   +DT      LK  F   ++ +PK++R+SS E + +C++
Sbjct: 190 ILKEGGKFIAKIFRGKDTSLLYCQLKLFFPTVTFAKPKSSRNSSIEAFAVCEN 208

[Close]

BLAST of IVF0026930 vs. TAIR 10
Match: AT5G01230.2 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein )

HSP 1 Score: 52.0 bits (123), Expect = 7.7e-07
Identity = 24/48 (50.00%), Postives = 32/48 (66.67%), Query Frame = 0


Query: 8  DFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQ 56
          D +YR+A+  G+ ARSAFKLLQI  +F +      V+DL  APG+W Q
Sbjct: 10 DIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQ 57

The following BLAST results are available for this feature:

BLAST of IVF0026930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A8ZT18	4.0e-24	32.60	Ribosomal RNA large subunit methyltransferase E OS=Desulfococcus oleovorans (str...	[more]
B8FL12	7.5e-23	33.03	Ribosomal RNA large subunit methyltransferase E OS=Desulfatibacillum aliphaticiv...	[more]
B9LSX2	1.1e-21	30.67	Ribosomal RNA large subunit methyltransferase E OS=Halorubrum lacusprofundi (str...	[more]
A0LGZ0	7.0e-21	32.31	Ribosomal RNA large subunit methyltransferase E OS=Syntrophobacter fumaroxidans ...	[more]
Q58771	1.2e-20	30.36	Ribosomal RNA large subunit methyltransferase E OS=Methanocaldococcus jannaschii...	[more]

BLAST of IVF0026930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C9F1	1.4e-128	100.00	ribosomal RNA large subunit methyltransferase E isoform X3 OS=Cucumis melo OX=36...	[more]
A0A0A0KQZ0	5.4e-125	96.64	FtsJ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G517710 PE=3 S...	[more]
A0A1S3C8U8	1.2e-124	91.19	ribosomal RNA large subunit methyltransferase E isoform X1 OS=Cucumis melo OX=36...	[more]
A0A1S4E250	1.6e-121	90.04	ribosomal RNA large subunit methyltransferase E isoform X2 OS=Cucumis melo OX=36...	[more]
A0A6J1H9J8	5.2e-112	87.87	uncharacterized protein LOC111461336 OS=Cucurbita moschata OX=3662 GN=LOC1114613...	[more]

BLAST of IVF0026930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008458862.1	6.05e-167	100.00	PREDICTED: ribosomal RNA large subunit methyltransferase E isoform X3 [Cucumis m...	[more]
XP_004142767.1	3.22e-162	96.64	uncharacterized protein LOC101216412 isoform X2 [Cucumis sativus] >KGN51324.1 hy...	[more]
XP_008458861.1	2.13e-161	91.19	PREDICTED: ribosomal RNA large subunit methyltransferase E isoform X1 [Cucumis m...	[more]
XP_016902309.1	2.49e-157	90.04	PREDICTED: ribosomal RNA large subunit methyltransferase E isoform X2 [Cucumis m...	[more]
XP_038889598.1	1.31e-156	94.12	ribosomal RNA large subunit methyltransferase E isoform X1 [Benincasa hispida]	[more]

BLAST of IVF0026930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G13830.1	1.3e-86	69.96	FtsJ-like methyltransferase family protein	[more]
AT4G25730.1	3.1e-16	29.60	FtsJ-like methyltransferase family protein	[more]
AT5G01230.1	1.1e-13	24.89	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	[more]
AT5G01230.2	7.7e-07	50.00	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002877	Ribosomal RNA methyltransferase FtsJ domain	PFAM	PF01728	FtsJ	coord: 19..230 e-value: 5.9E-45 score: 153.6
IPR015507	Ribosomal RNA large subunit methyltransferase E	PIRSF	PIRSF005461	23S_rRNA_mtase	coord: 3..238 e-value: 1.7E-47 score: 159.7
IPR015507	Ribosomal RNA large subunit methyltransferase E	HAMAP	MF_01547	RNA_methyltr_E	coord: 3..233 score: 28.643524
None	No IPR available	GENE3D	3.40.50.150	Vaccinia Virus protein VP39	coord: 15..237 e-value: 6.6E-51 score: 174.7
None	No IPR available	PANTHER	PTHR10920:SF18	RRNA METHYLTRANSFERASE 2, MITOCHONDRIAL	coord: 5..233
None	No IPR available	PANTHER	PTHR10920	RIBOSOMAL RNA METHYLTRANSFERASE	coord: 5..233
None	No IPR available	CDD	cd02440	AdoMet_MTases	coord: 43..122 e-value: 0.00940969 score: 32.7871
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 8..232

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0026930.1	IVF0026930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031167	rRNA methylation
biological_process	GO:0032259	methylation
biological_process	GO:0001510	RNA methylation
molecular_function	GO:0008650	rRNA (uridine-2'-O-)-methyltransferase activity
molecular_function	GO:0008168	methyltransferase activity