IVF0026856 (gene) Melon (IVF77) v1

Overview


Name	IVF0026856
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	heterogeneous nuclear ribonucleoprotein 1-like
Location	chr04: 12584565 .. 12586691 (+)
RNA-Seq Expression	IVF0026856
Synteny	IVF0026856

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTCCGACGAGGGTAAGCTTTTCATTGGTGGAATAGCTTGGGACACCTCCGAGGAGAAGCTTAGGGACTATTTCTCTCAATTCGGTGAGGTTATTCAAGCCGTTATTATGCGCGACAAGACCACTGGCCGTCCTCGTGGTTTTGGCTTTGTTGTCTTCTCTGATCCTTCTCTTCTCGATCAGGTTCTTCAAGATAAGCACACCATCGATGGGCGCCAGGTTCTTTTTTTTTTTTTTTTTTTTTACCTCTGCAATTTTCTTTCTATCTGCATTACTTTGTTCTTTTATTAGGTTTTGCTTTTTTTCCGAATCATGTTGTTTTTGTAGTGGTAGGCTGTTGATTACTTTAATTTAGGACCTCATTATTAGCAGTGGTTCTATAGGAATCCTCGCTCTCTGTTCTCCTTGTATTTCATTAGTTCGTAATTGGGTTACTGTTATGAACTCTGACTTTGAAATATGTCAGAATAGTTTTGTTTGGTCCTTTGGTTATTTGGTTCTCTGGAAATACCCTCTTCCCCTTTCAACTGCAAGGGATGTTTGAATGGGAGATGCGGATCATTCTAGTGTTGATGCCCTCATCAGTTGTGTAGCTATCACCCGTCATTCGTTATCATTTTCTAATATAATGTGTACATTTCTTGTTTTTTAGACCAAAAGATAATATCTATTCGTTTGTAAGGGGTGTATGTGAGATAAGTTGATTAGCAGATGCCTTCCTGGTAAAAAGAACATAAGTGGTATGCTACTGTTGTTTTATCGGGTTAAAAGTAATAAAGAATTCTGGTAGACTATTGGCATTGCACTGCGTGCAGTTTAGGTTTTAGATATAGGACATTGAGGAAAGGGTTACATATCAACTTGATAGTTGACTCATTATGACATGATTACTTTAAATTGTTGAAAATTTTATATTTTCTAGCTTATTATGGTAACTGGCGATGATGATGGCCTGTGCATACGTTGAGTTGATGTACTTTATTTGTGTTCCCGCTGAGCCTTTTCAGCAATTTGAAGTTGTGCTTTATTGACACAGGTGGAGGCAAAAAGGGCGCTATCAAGAGAGGAACAACAAACTTCCACAAGAAGTGGCATTAACAACTCCGGTAGAAGTTCTGGAGGTAGTGGATATTTTAGGACCAAGAAAATATTTGTGGGAGGCCTACCATCGGCACTAACAGAAGATGGGTTCCGGCAGTATTTTGAAAGTTATGGTCAAGTAACTGATGTAGTGATAATGTATGACCAAAATACTCAAAGACCTCGTGGATTTGGTTTCATAACATTTGACAATGAAGATGCAGTTGATAGAGTACTTTATAAGAGCTTTCATGAACTGAATGGTAAACTTGTAGAGGTGAAACGGGCACTTCCTAAAGATGCAAATCCAGGAAGTGGTGGCCGTGGAGGCTATCAAAATTATGGTGCTTCCGGCACTAATTCTAACAGCTTTGATGGTAGATCAGATGGCAATAGATATATGCAACCTCAGTCTACTGCTGGTGGTTTCCCCCCATATTCTGGTTATAGTGTATCAGGTTATGGTTATGGGGACCGAACAGTGGTGTCCCTTATGGAAGTTACGGTAGTTATGGTGTCGGTATGTATGGTGGTGCAAATGCTGGATTTGGTGGTCCAGCTGGACCATTTGGAAATCCAGGTGCTGTCAATGCTGGTTATCTAAGTGGAGCACCTGGGGCCATGAAAAGTTCTTGGACCAACCAAGCTCCAGGATACGGTGGTCCTGGCTATGGTGCCAGTCCAGGCTTTGGGGCTGCAGCTCCTTGGAATGCCTCAGGTACTGGAGCACCTCCTTCTGCCCCAAGGGGCCAATCGCCTAGTGGGGCTTCCGGGTATGGGAATCAGGGTTATTATGGTGGAAACGATGGTACTTATGGTGGCTATGGAGCCTCTGGTGGACGATCTGCAAGTGCTCCAAATAGCAATGTTGGTACAGGTCAAAGTGGAGAGCAACATGGCATGAGCGGTGGGTACATGGGGAGTGGCTATGGTGACGCTAATGGAAATTCGGGTTACACCGGTGGTGGCTGGAGATCTGATGTTTCACAGACTCCAGGTGGTTATGGTGGTGGGTATGGTGGCAATCAGTCCAGGCATGGTTAA

mRNA sequence

ATGGACTCCGACGAGGGTAAGCTTTTCATTGGTGGAATAGCTTGGGACACCTCCGAGGAGAAGCTTAGGGACTATTTCTCTCAATTCGGTGAGGTTATTCAAGCCGTTATTATGCGCGACAAGACCACTGGCCGTCCTCGTGGTTTTGGCTTTGTTGTCTTCTCTGATCCTTCTCTTCTCGATCAGGTTCTTCAAGATAAGCACACCATCGATGGGCGCCAGGTGGAGGCAAAAAGGGCGCTATCAAGAGAGGAACAACAAACTTCCACAAGAAGTGGCATTAACAACTCCGGTAGAAGTTCTGGAGGTAGTGGATATTTTAGGACCAAGAAAATATTTGTGGGAGGCCTACCATCGGCACTAACAGAAGATGGGTTCCGGCAGTATTTTGAAAGTTATGGTCAAGTAACTGATGTAGTGATAATGTATGACCAAAATACTCAAAGACCTCGTGGATTTGGTTTCATAACATTTGACAATGAAGATGCAGTTGATAGAGTACTTTATAAGAGCTTTCATGAACTGAATGGTAAACTTGTAGAGGTGAAACGGGCACTTCCTAAAGATGCAAATCCAGGAAGTGGTGGCCGTGGAGGCTATCAAAATTATGGTGCTTCCGGCACTAATTCTAACAGCTTTGATGGTAGATCAGATGGCAATAGATATATGCAACCTCAGTTATGGTTATGGGGACCGAACAGTGGTGTCCCTTATGGAAGTTACGGTAGTTATGGTGTCGGTATGTATGGTGGTGCAAATGCTGGATTTGGTGGTCCAGCTGGACCATTTGGAAATCCAGGTGCTGTCAATGCTGGTTATCTAAGTGGAGCACCTGGGGCCATGAAAAGTTCTTGGACCAACCAAGCTCCAGGATACGGTGGTCCTGGCTATGGTGCCAGTCCAGGCTTTGGGGCTGCAGCTCCTTGGAATGCCTCAGGTACTGGAGCACCTCCTTCTGCCCCAAGGGGCCAATCGCCTAGTGGGGCTTCCGGGTATGGGAATCAGGGTTATTATGGTGGAAACGATGGTACTTATGGTGGCTATGGAGCCTCTGGTGGACGATCTGCAAGTGCTCCAAATAGCAATGTTGGTACAGGTCAAAGTGGAGAGCAACATGGCATGAGCGGTGGGTACATGGGGAGTGGCTATGGTGACGCTAATGGAAATTCGGGTTACACCGGTGGTGGCTGGAGATCTGATGTTTCACAGACTCCAGGTGGTTATGGTGGTGGGTATGGTGGCAATCAGTCCAGGCATGGTTAA

Coding sequence (CDS)

ATGGACTCCGACGAGGGTAAGCTTTTCATTGGTGGAATAGCTTGGGACACCTCCGAGGAGAAGCTTAGGGACTATTTCTCTCAATTCGGTGAGGTTATTCAAGCCGTTATTATGCGCGACAAGACCACTGGCCGTCCTCGTGGTTTTGGCTTTGTTGTCTTCTCTGATCCTTCTCTTCTCGATCAGGTTCTTCAAGATAAGCACACCATCGATGGGCGCCAGGTGGAGGCAAAAAGGGCGCTATCAAGAGAGGAACAACAAACTTCCACAAGAAGTGGCATTAACAACTCCGGTAGAAGTTCTGGAGGTAGTGGATATTTTAGGACCAAGAAAATATTTGTGGGAGGCCTACCATCGGCACTAACAGAAGATGGGTTCCGGCAGTATTTTGAAAGTTATGGTCAAGTAACTGATGTAGTGATAATGTATGACCAAAATACTCAAAGACCTCGTGGATTTGGTTTCATAACATTTGACAATGAAGATGCAGTTGATAGAGTACTTTATAAGAGCTTTCATGAACTGAATGGTAAACTTGTAGAGGTGAAACGGGCACTTCCTAAAGATGCAAATCCAGGAAGTGGTGGCCGTGGAGGCTATCAAAATTATGGTGCTTCCGGCACTAATTCTAACAGCTTTGATGGTAGATCAGATGGCAATAGATATATGCAACCTCAGTTATGGTTATGGGGACCGAACAGTGGTGTCCCTTATGGAAGTTACGGTAGTTATGGTGTCGGTATGTATGGTGGTGCAAATGCTGGATTTGGTGGTCCAGCTGGACCATTTGGAAATCCAGGTGCTGTCAATGCTGGTTATCTAAGTGGAGCACCTGGGGCCATGAAAAGTTCTTGGACCAACCAAGCTCCAGGATACGGTGGTCCTGGCTATGGTGCCAGTCCAGGCTTTGGGGCTGCAGCTCCTTGGAATGCCTCAGGTACTGGAGCACCTCCTTCTGCCCCAAGGGGCCAATCGCCTAGTGGGGCTTCCGGGTATGGGAATCAGGGTTATTATGGTGGAAACGATGGTACTTATGGTGGCTATGGAGCCTCTGGTGGACGATCTGCAAGTGCTCCAAATAGCAATGTTGGTACAGGTCAAAGTGGAGAGCAACATGGCATGAGCGGTGGGTACATGGGGAGTGGCTATGGTGACGCTAATGGAAATTCGGGTTACACCGGTGGTGGCTGGAGATCTGATGTTTCACAGACTCCAGGTGGTTATGGTGGTGGGTATGGTGGCAATCAGTCCAGGCATGGTTAA

Protein sequence

MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSLLDQVLQDKHTIDGRQVEAKRALSREEQQTSTRSGINNSGRSSGGSGYFRTKKIFVGGLPSALTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLVEVKRALPKDANPGSGGRGGYQNYGASGTNSNSFDGRSDGNRYMQPQLWLWGPNSGVPYGSYGSYGVGMYGGANAGFGGPAGPFGNPGAVNAGYLSGAPGAMKSSWTNQAPGYGGPGYGASPGFGAAAPWNASGTGAPPSAPRGQSPSGASGYGNQGYYGGNDGTYGGYGASGGRSASAPNSNVGTGQSGEQHGMSGGYMGSGYGDANGNSGYTGGGWRSDVSQTPGGYGGGYGGNQSRHG

Homology

[Close]

BLAST of IVF0026856 vs. ExPASy Swiss-Prot
Match: Q8W034 (Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP1 PE=1 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 1.1e-104
Identity = 248/451 (54.99%), Postives = 295/451 (65.41%), Query Frame = 0


Query: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSLL 60
           MDSD+GKLF+GGI+W+T E+KLR++F+ +GEV QA++MRDK TGRPRGFGFV+FSDPS+L
Sbjct: 1   MDSDQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVL 60

Query: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSTRSGINNSGRSSGGSGYFRTKKIFVGGLPSA 120
           D+VLQ+KH+ID R+V+ KRA+SREEQQ S R+G  N+ RSSGG  Y +TKKIFVGGLP  
Sbjct: 61  DRVLQEKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPT 120

Query: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180
           LT++ FRQYFE YG VTDV IMYDQ T RPRGFGF++FD+EDAVD VL+K+FH+L+GK V
Sbjct: 121 LTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGKQV 180

Query: 181 EVKRALPKDANPGSGGR-------GGYQNYGASGTNSNSFDGRSDGNRYMQPQLWLWGPN 240
           EVKRALPKDANPG GGR       GGYQ YG    N +S+DGR D NR++Q Q       
Sbjct: 181 EVKRALPKDANPGGGGRSMGGGGSGGYQGYGG---NESSYDGRMDSNRFLQHQ----SVG 240

Query: 241 SGVP-YGSYGSYGVGMYGGAN-AGFGGPAGPFGNPGAVNAGYLSG-----APGAMKSSWT 300
           +G+P YGS G YG G   G+N AG+G   G  G+ G   AG  +G      PGA   S T
Sbjct: 241 NGLPSYGSSG-YGAGYGNGSNGAGYGAYGGYTGSAGGYGAGATAGYGATNIPGAGYGSST 300

Query: 301 NQAP----------GYGGPGYGASPGFGAAAPWNASGTGAPPSAPRGQSPSGASGYGNQG 360
             AP          GYG PGYG+    GAA     SG G P +AP  QSP   SGY NQG
Sbjct: 301 GVAPRNSWDTPASSGYGNPGYGS----GAA----HSGYGVPGAAPPTQSP---SGYSNQG 360

Query: 361 Y----YGGNDGTYG---GYGASGGRSASAPNSNVGTGQSGEQHGMSGGYMGSGYGDANGN 420
           Y    Y G+D  YG    YG  GGR +   ++N G          SGGYMG GYGD    
Sbjct: 361 YGYGGYSGSDSGYGNQAAYGVVGGRPSGGGSNNPG----------SGGYMGGGYGD---- 410

[Close]

BLAST of IVF0026856 vs. ExPASy Swiss-Prot
Match: Q98SJ2 (DAZ-associated protein 1 OS=Xenopus laevis OX=8355 GN=dazap1 PE=1 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.7e-44
Identity = 122/320 (38.12%), Postives = 169/320 (52.81%), Query Frame = 0


Query: 6   GKLFIGGIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSLLDQVLQ 65
           GKLF+GG+ W T++E LR YFSQ+GEV+  VIM+DKTT + RGFGFV F DP+ +  VL 
Sbjct: 10  GKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 69

Query: 66  DK-HTIDGRQVEAKRALSR--EEQQTSTRSGINNSGRSSGGSGYFRTKKIFVGGLPSALT 125
            + HT+DGR ++ K    R  + +++  R G       +  S   R+ KIFVGG+P    
Sbjct: 70  SRPHTLDGRNIDPKPCTPRGMQPERSRPREGWQQKEPRTENS---RSNKIFVGGIPHNCG 129

Query: 126 EDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLVEV 185
           E   ++YF  +G VT+VV++YD   QRPRGFGFITF++E +VD+ +   FH++ GK VEV
Sbjct: 130 ETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEV 189

Query: 186 KRALPKDANPGSGGRGGYQNYGASGTNSNSFDGRSDGNRYMQPQLWLWGPNSGVPYGSYG 245
           KRA P+D+   + G  G   +G     S +    ++G     PQ W            Y 
Sbjct: 190 KRAEPRDSKSQTPGPPGSNQWG-----SRAMQSTANGWTGQPPQTW----------QGYS 249

Query: 246 SYGVGMYGGAN-AGFGGPAGPFGNPGAVNAGYLSGAPGAMKSSWTNQAPGYGGPGYGASP 305
             G+ M  G    G+G PAG  G P           P +      +  PG   P  G  P
Sbjct: 250 PQGMWMPTGQTIGGYGQPAGRGGPP----------PPPSFAPFLVSTTPGPFPPPQGFPP 300

Query: 306 GFGAAAPWNASGTGAPPSAP 322
           G+    P+   G G PP  P
Sbjct: 310 GYATPPPF-GYGYGPPPPPP 300

[Close]

BLAST of IVF0026856 vs. ExPASy Swiss-Prot
Match: P51992 (Heterogeneous nuclear ribonucleoprotein A3 homolog 2 OS=Xenopus laevis OX=8355 PE=2 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 3.1e-40
Identity = 150/416 (36.06%), Postives = 203/416 (48.80%), Query Frame = 0


Query: 7   KLFIGGIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSLLDQVLQD 66
           KLFIGG++++T+++ LR++F Q+G++   V+MRD  T R RGFGFV +S    +D  +  
Sbjct: 28  KLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDASMSA 87

Query: 67  K-HTIDGRQVEAKRALSREEQQTSTRSGINNSGRSSGGSGYFRTKKIFVGGLPSALTEDG 126
           + H +DGR VE KRA+SRE+   S R G            +   KKIFVGG+     E  
Sbjct: 88  RPHKVDGRVVEPKRAVSRED---SARPG-----------AHLTVKKIFVGGIKEDTEEYH 147

Query: 127 FRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLVEVKRA 186
            R YFE YG++  + +M D+ + + RGF F+TFD+ D VD+++ + +H +N    EVK+A
Sbjct: 148 LRDYFEGYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINLHNCEVKKA 207

Query: 187 LPKD----ANPGSGGRGGYQNYGASGTNSNSFDGRSDGNRYMQPQLWLWGPNSGVPYGSY 246
           L K     A+   G  GG  N+   G N    DG   GN         +G   G  +G+ 
Sbjct: 208 LSKQEMQTASAQRGRGGGGSNFMGRGGNYGGGDGGGGGN---------FGRGGG--FGNR 267

Query: 247 GSYGVGMYGGANAGFGGPAGPFGNPGAVNAGYLSGAPGAMKSSWTNQAPGYGGPGYGASP 306
           G YG G  GG   G+GG    +   G     Y  G             PGYGG GYG SP
Sbjct: 268 GGYGGG--GGRGGGYGGGGDGYNGFGGDGGNYGGG-------------PGYGGRGYGGSP 327

Query: 307 GFGAAAPWNASGTGAPPSAPRGQSPSGASGYGNQGYYGGNDGTYGGYGASGGRSASAPNS 366
           G+G        G G       G    G  GY   G +GG  G Y  +G+ GG+      S
Sbjct: 328 GYGNQGGGYGGGGGG-----GGAGGGGYDGYNEGGNFGG--GNYNDFGSYGGQQ----QS 384

Query: 367 NVGTGQSGEQHGMS-GGYMGSGYGDANGNSGYTGGGWRSDVSQTPGGYGGGYGGNQ 417
           N G  ++G   G S GG  GS  G   G  G  GGG         GG GG YGG +
Sbjct: 388 NYGPMKAGNFSGRSTGGSGGSSSGPYGGGYGSGGGG--------GGGGGGSYGGRR 384

[Close]

BLAST of IVF0026856 vs. ExPASy Swiss-Prot
Match: Q920Q6 (RNA-binding protein Musashi homolog 2 OS=Mus musculus OX=10090 GN=Msi2 PE=1 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 5.3e-40
Identity = 134/386 (34.72%), Postives = 189/386 (48.96%), Query Frame = 0


Query: 4   DEGKLFIGGIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSLLDQV 63
           D GK+FIGG++W TS + LRDYFS+FGE+ + ++MRD TT R RGFGFV F+DP+ +D+V
Sbjct: 19  DPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKV 78

Query: 64  L-QDKHTIDGRQVEAKRALSREEQQTSTRSGINNSGRSSGGSGYFRTKKIFVGGLPSALT 123
           L Q  H +D + ++ K A  R  Q                     RTKKIFVGGL +   
Sbjct: 79  LGQPHHELDSKTIDPKVAFPRRAQPKMVT----------------RTKKIFVGGLSANTV 138

Query: 124 EDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLVEV 183
            +  +QYFE +G+V D ++M+D+ T R RGFGF+TF+NED V++V    FHE+N K+VE 
Sbjct: 139 VEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVEC 198

Query: 184 KRALPKDANPGSGGRGGYQNYGASGTNSNSFDGRSDGNRYMQPQLWLWGPNSGVPYGSYG 243
           K+A PK+     G R                 GR+ G  Y      L     G P     
Sbjct: 199 KKAQPKEVMFPPGTR-----------------GRARGLPYTMDAFMLGMGMLGYP-NFVA 258

Query: 244 SYGVGMYGGA-NAGFGGPAGPFGNPGAVNAGYLSGAPGAMKSSWTNQAPGYGGPGYGASP 303
           +YG G  G A + G+  P  P    G V A  ++ A G++ +S            Y A P
Sbjct: 259 TYGRGYPGFAPSYGYQFPGFPAAAYGPVAAAAVAAARGSVLNS------------YSAQP 318

Query: 304 GFGAAAPWNASGTGAPPSAPRGQSPSGASGYGNQGYYGGNDGTYGGYGASGG----RSAS 363
            FGA            P++P G +P+   G+      G     YG      G     SA+
Sbjct: 319 NFGA------------PASPAGSNPARPGGFPGANSPGPVADLYGPASQDSGVGNYISAA 341

Query: 364 APNSNVGTGQSGEQHGMSGGYMGSGY 384
           +P    G G     HG++G  + + +
Sbjct: 379 SPQPGSGFG-----HGIAGPLIATAF 341

[Close]

BLAST of IVF0026856 vs. ExPASy Swiss-Prot
Match: P51968 (Heterogeneous nuclear ribonucleoprotein A3 homolog 1 OS=Xenopus laevis OX=8355 PE=2 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.2e-39
Identity = 150/415 (36.14%), Postives = 201/415 (48.43%), Query Frame = 0


Query: 7   KLFIGGIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSLLDQVLQD 66
           KLFIGG++++T+++ LR++F Q+G++   V+MRD  T R RGFGFV +S    +D  +  
Sbjct: 28  KLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDASMSA 87

Query: 67  K-HTIDGRQVEAKRALSREEQQTSTRSGINNSGRSSGGSGYFRTKKIFVGGLPSALTEDG 126
           + H +DGR VE KRA+SRE+   S R G            +   KKIFVGG+     E  
Sbjct: 88  RPHKVDGRVVEPKRAVSRED---SARPG-----------AHLTVKKIFVGGIKEDTEEYH 147

Query: 127 FRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLVEVKRA 186
            R Y ESYG++  + +M D+ + + RGF F+TFD+ D VD+++ + +H +NG   EVK+A
Sbjct: 148 LRDYSESYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 207

Query: 187 LPKD----ANPGSGGRGGYQNYGASGTNSNSFDGRSDGNRYMQPQLWLWGPNSGVPYGSY 246
           L K     A+   G  GG  N+   G N     G  DG  + +     +G   G  YG  
Sbjct: 208 LSKQEMQTASAQRGRGGGGSNFMGRGGNY----GGGDGGNFGRGGGGGFGNRGG--YGGG 267

Query: 247 GSYGVGMYGGANAGFGGPAGPFGNPGAVNAGYLSGAPGAMKSSWTNQAPGYGGPGYGASP 306
           G  G G YGG   G+ G  G  GN G                      PGYGG GYG SP
Sbjct: 268 GGRGGGGYGGGGDGYNGFGGDGGNYGG--------------------GPGYGGRGYGGSP 327

Query: 307 GFGAAAPWNASGTGAPPSAPRGQSPSGASGYGNQGYYGGNDGTYGGYGASGGRSASAPNS 366
           G+G        G G            G  GY   G +GG  G Y  +G  GG+      S
Sbjct: 328 GYGNQGGGYGGGGG------------GYDGYNESGNFGG--GNYNDFGNYGGQQ----QS 372

Query: 367 NVGTGQSGEQHGMSGGYMGSGYGDANGNSGYTGGGWRSDVSQTPGGYGGGYGGNQ 417
           N G  + G   G S G  GSG G   G  G +GGG         GG GG YGG +
Sbjct: 388 NYGPMKGGSFSGRSSG--GSGSGPYGGGYG-SGGG---------GGGGGSYGGRR 372

[Close]

BLAST of IVF0026856 vs. ExPASy TrEMBL
Match: A0A1S3BHX8 (heterogeneous nuclear ribonucleoprotein 1-like OS=Cucumis melo OX=3656 GN=LOC103489847 PE=4 SV=1)

HSP 1 Score: 797.0 bits (2057), Expect = 3.9e-227
Identity = 416/436 (95.41%), Postives = 416/436 (95.41%), Query Frame = 0


Query: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSLL 60
           MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSLL
Sbjct: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSLL 60

Query: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSTRSGINNSGRSSGGSGYFRTKKIFVGGLPSA 120
           DQVLQDKHTIDGRQVEAKRALSREEQQTSTRSGINNSGRSSGGSGYFRTKKIFVGGLPSA
Sbjct: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSTRSGINNSGRSSGGSGYFRTKKIFVGGLPSA 120

Query: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180
           LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV
Sbjct: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180

Query: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNSNSFDGRSDGNRYMQPQ-------------- 240
           EVKRALPKDANPGSGGRGGYQNYGASGTNSNSFDGRSDGNRYMQPQ              
Sbjct: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNSNSFDGRSDGNRYMQPQSTAGGFPPYSGYSV 240

Query: 241 --LWLWGPNSGVPYGSYGSYGVGMYGGANAGFGGPAGPFGNPGAVNAGYLSGAPGAMKSS 300
                 GPNSGVPYGSYGSYGVGMYGGANAGFGGPAGPFGNPGAVNAGYLSGAPGAMKSS
Sbjct: 241 SGYGYGGPNSGVPYGSYGSYGVGMYGGANAGFGGPAGPFGNPGAVNAGYLSGAPGAMKSS 300

Query: 301 WTNQAPGYGGPGYGASPGFGAAAPWNASGTGAPPSAPRGQSPSGASGYGNQGYYGGNDGT 360
           WTNQAPGYGGPGYGASPGFGAAAPWNASGTGAPPSAPRGQSPSGASGYGNQGYYGGNDGT
Sbjct: 301 WTNQAPGYGGPGYGASPGFGAAAPWNASGTGAPPSAPRGQSPSGASGYGNQGYYGGNDGT 360

Query: 361 YGGYGASGGRSASAPNSNVGTGQSGEQHGMSGGYMGSGYGDANGNSGYTGGGWRSDVSQT 420
           YGGYGASGGRSASAPNSNVGTGQSGEQHGMSGGYMGSGYGDANGNSGYTGGGWRSDVSQT
Sbjct: 361 YGGYGASGGRSASAPNSNVGTGQSGEQHGMSGGYMGSGYGDANGNSGYTGGGWRSDVSQT 420

[Close]

BLAST of IVF0026856 vs. ExPASy TrEMBL
Match: A0A0A0L8W1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G608180 PE=4 SV=1)

HSP 1 Score: 785.0 bits (2026), Expect = 1.5e-223
Identity = 409/436 (93.81%), Postives = 412/436 (94.50%), Query Frame = 0


Query: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSLL 60
           MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSLL
Sbjct: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSLL 60

Query: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSTRSGINNSGRSSGGSGYFRTKKIFVGGLPSA 120
           DQVLQDKHTIDGRQVEAKRALSREEQQTSTRSGINNSGRSSGGSGYFRTKKIFVGGLPSA
Sbjct: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSTRSGINNSGRSSGGSGYFRTKKIFVGGLPSA 120

Query: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180
           LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV
Sbjct: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180

Query: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNSNSFDGRSDGNRYMQPQ-------------- 240
           EVKRALPKDANPGSGGR GYQNYGASGTNSNSFDGRSDGNRYMQPQ              
Sbjct: 181 EVKRALPKDANPGSGGRAGYQNYGASGTNSNSFDGRSDGNRYMQPQSTAGGFPPYSGYSV 240

Query: 241 --LWLWGPNSGVPYGSYGSYGVGMYGGANAGFGGPAGPFGNPGAVNAGYLSGAPGAMKSS 300
                 GPNSGVPYGSYGSYGVGMYGGANAGFGGPAGPFGNPGAVNAGYLSGAPGAMKSS
Sbjct: 241 SGYGYGGPNSGVPYGSYGSYGVGMYGGANAGFGGPAGPFGNPGAVNAGYLSGAPGAMKSS 300

Query: 301 WTNQAPGYGGPGYGASPGFGAAAPWNASGTGAPPSAPRGQSPSGASGYGNQGYYGGNDGT 360
           WTNQAPGYGGPGYGASPGFGAAAPWNASGTGAPPSAPRGQSPSGASGYGNQGYYGGNDGT
Sbjct: 301 WTNQAPGYGGPGYGASPGFGAAAPWNASGTGAPPSAPRGQSPSGASGYGNQGYYGGNDGT 360

Query: 361 YGGYGASGGRSASAPNSNVGTGQSGEQHGMSGGYMGSGYGDANGNSGYTGGGWRSDVSQT 420
           YGGYGASGGR+ASAPNSNVGTGQSGEQHG+SGGYMGSGYGD NGNSGY+ GGWRSD SQT
Sbjct: 361 YGGYGASGGRAASAPNSNVGTGQSGEQHGVSGGYMGSGYGDTNGNSGYSSGGWRSDASQT 420

[Close]

BLAST of IVF0026856 vs. ExPASy TrEMBL
Match: A0A5A7T3C9 (Heterogeneous nuclear ribonucleoprotein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G001590 PE=4 SV=1)

HSP 1 Score: 763.8 bits (1971), Expect = 3.6e-217
Identity = 404/436 (92.66%), Postives = 404/436 (92.66%), Query Frame = 0


Query: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSLL 60
           MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSLL
Sbjct: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSLL 60

Query: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSTRSGINNSGRSSGGSGYFRTKKIFVGGLPSA 120
           D            QVEAKRALSREEQQTSTRSGINNSGRSSGGSGYFRTKKIFVGGLPSA
Sbjct: 61  D------------QVEAKRALSREEQQTSTRSGINNSGRSSGGSGYFRTKKIFVGGLPSA 120

Query: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180
           LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV
Sbjct: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180

Query: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNSNSFDGRSDGNRYMQPQ-------------- 240
           EVKRALPKDANPGSGGRGGYQNYGASGTNSNSFDGRSDGNRYMQPQ              
Sbjct: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNSNSFDGRSDGNRYMQPQSTAGGFPPYSGYSV 240

Query: 241 --LWLWGPNSGVPYGSYGSYGVGMYGGANAGFGGPAGPFGNPGAVNAGYLSGAPGAMKSS 300
                 GPNSGVPYGSYGSYGVGMYGGANAGFGGPAGPFGNPGAVNAGYLSGAPGAMKSS
Sbjct: 241 SGYGYGGPNSGVPYGSYGSYGVGMYGGANAGFGGPAGPFGNPGAVNAGYLSGAPGAMKSS 300

Query: 301 WTNQAPGYGGPGYGASPGFGAAAPWNASGTGAPPSAPRGQSPSGASGYGNQGYYGGNDGT 360
           WTNQAPGYGGPGYGASPGFGAAAPWNASGTGAPPSAPRGQSPSGASGYGNQGYYGGNDGT
Sbjct: 301 WTNQAPGYGGPGYGASPGFGAAAPWNASGTGAPPSAPRGQSPSGASGYGNQGYYGGNDGT 360

Query: 361 YGGYGASGGRSASAPNSNVGTGQSGEQHGMSGGYMGSGYGDANGNSGYTGGGWRSDVSQT 420
           YGGYGASGGRSASAPNSNVGTGQSGEQHGMSGGYMGSGYGDANGNSGYTGGGWRSDVSQT
Sbjct: 361 YGGYGASGGRSASAPNSNVGTGQSGEQHGMSGGYMGSGYGDANGNSGYTGGGWRSDVSQT 420

[Close]

BLAST of IVF0026856 vs. ExPASy TrEMBL
Match: A0A6J1HIF4 (heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111463883 PE=4 SV=1)

HSP 1 Score: 745.7 bits (1924), Expect = 1.0e-211
Identity = 389/436 (89.22%), Postives = 400/436 (91.74%), Query Frame = 0


Query: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSLL 60
           MDSDEGKLFIGGIAWDTSEEKLR+YFSQFGEV QAVIMRDKTTGRPRGFGFVVFSDPS+L
Sbjct: 1   MDSDEGKLFIGGIAWDTSEEKLREYFSQFGEVNQAVIMRDKTTGRPRGFGFVVFSDPSVL 60

Query: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSTRSGINNSGRSSGGSGYFRTKKIFVGGLPSA 120
           DQVLQDKHTIDGRQVEAKRALSREEQQTS+RSGI NSGRSSGGSGYFRTKKIFVGGLPSA
Sbjct: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGIYNSGRSSGGSGYFRTKKIFVGGLPSA 120

Query: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180
           LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV
Sbjct: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180

Query: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNSNSFDGRSDGNRYMQPQ-------------- 240
           EVKRALPKDANPGSGGRGGYQNYGASGTN+N+FDGRSDGNRYMQPQ              
Sbjct: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNANNFDGRSDGNRYMQPQSTAGGFPPYAGYSV 240

Query: 241 --LWLWGPNSGVPYGSYGSYGVGMYGGANAGFGGPAGPFGNPGAVNAGYLSGAPGAMKSS 300
                 GPNSGVPYGSYGSYGVGMYGGAN GFGGPAGPFGNP AVNAGYLSGAPGAMKSS
Sbjct: 241 SSYGYGGPNSGVPYGSYGSYGVGMYGGANTGFGGPAGPFGNPSAVNAGYLSGAPGAMKSS 300

Query: 301 WTNQAPGYGGPGYGASPGFGAAAPWNASGTGAPPSAPRGQSPSGASGYGNQGYYGGNDGT 360
           W NQAPGYGGPGYGASPGFGA APW+ASGT  PP APRGQSPSGASGYGNQGYYGGNDGT
Sbjct: 301 WPNQAPGYGGPGYGASPGFGAGAPWSASGTSGPP-APRGQSPSGASGYGNQGYYGGNDGT 360

Query: 361 YGGYGASGGRSASAPNSNVGTGQSGEQHGMSGGYMGSGYGDANGNSGYTGGGWRSDVSQT 420
           YGGYG SGGR+AS PNSNVG+GQSGE HGM+GGYMGSGYG+ NGNSGY+ GGWRSD SQT
Sbjct: 361 YGGYGTSGGRAASGPNSNVGSGQSGESHGMTGGYMGSGYGETNGNSGYSSGGWRSDASQT 420

[Close]

BLAST of IVF0026856 vs. ExPASy TrEMBL
Match: A0A6J1HUK4 (heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111466841 PE=4 SV=1)

HSP 1 Score: 739.6 bits (1908), Expect = 7.4e-210
Identity = 386/436 (88.53%), Postives = 398/436 (91.28%), Query Frame = 0


Query: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSLL 60
           MDSDEGKLFIGGIAWDTSEEKLR+YFS+FGEV QAVIMRDKTTGRPRGFGFVVFSDPS+L
Sbjct: 1   MDSDEGKLFIGGIAWDTSEEKLREYFSEFGEVNQAVIMRDKTTGRPRGFGFVVFSDPSVL 60

Query: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSTRSGINNSGRSSGGSGYFRTKKIFVGGLPSA 120
           DQVLQDKHTIDGRQVEAKRALSREEQQTS+RSGI NSGRSSGGSGYFRTKKIFVGGLPSA
Sbjct: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGIYNSGRSSGGSGYFRTKKIFVGGLPSA 120

Query: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180
           LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV
Sbjct: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180

Query: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNSNSFDGRSDGNRYMQPQ-------------- 240
           EVKRALPKDANPGSGGRGGYQNYGASGTN+N+FDGRSDGNRYMQPQ              
Sbjct: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNANNFDGRSDGNRYMQPQSTAGGFPPYAGYSV 240

Query: 241 --LWLWGPNSGVPYGSYGSYGVGMYGGANAGFGGPAGPFGNPGAVNAGYLSGAPGAMKSS 300
                 GPNSGVPYGSYGSYGVGMYGGAN GFGGPAGPFGNP AVNAGYLSGAPGAMKSS
Sbjct: 241 SSYGYGGPNSGVPYGSYGSYGVGMYGGANTGFGGPAGPFGNPSAVNAGYLSGAPGAMKSS 300

Query: 301 WTNQAPGYGGPGYGASPGFGAAAPWNASGTGAPPSAPRGQSPSGASGYGNQGYYGGNDGT 360
           W NQ P YGGPGYGASPGFGA APW+ASGT  PP APRGQSPSGASGYGNQGYYGGNDGT
Sbjct: 301 WPNQGPRYGGPGYGASPGFGAGAPWSASGTSGPP-APRGQSPSGASGYGNQGYYGGNDGT 360

Query: 361 YGGYGASGGRSASAPNSNVGTGQSGEQHGMSGGYMGSGYGDANGNSGYTGGGWRSDVSQT 420
           YGGYG SGGR+AS PNSNVG+GQSGE HGM+GGYMGSGYG+ NGNSGY+ GGWRSD SQT
Sbjct: 361 YGGYGTSGGRAASGPNSNVGSGQSGEPHGMTGGYMGSGYGETNGNSGYSSGGWRSDASQT 420

[Close]

BLAST of IVF0026856 vs. NCBI nr
Match: XP_008447387.1 (PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Cucumis melo])

HSP 1 Score: 788 bits (2035), Expect = 1.88e-286
Identity = 416/436 (95.41%), Postives = 416/436 (95.41%), Query Frame = 0


Query: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSLL 60
           MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSLL
Sbjct: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSLL 60

Query: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSTRSGINNSGRSSGGSGYFRTKKIFVGGLPSA 120
           DQVLQDKHTIDGRQVEAKRALSREEQQTSTRSGINNSGRSSGGSGYFRTKKIFVGGLPSA
Sbjct: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSTRSGINNSGRSSGGSGYFRTKKIFVGGLPSA 120

Query: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180
           LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV
Sbjct: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180

Query: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNSNSFDGRSDGNRYMQPQ-------------- 240
           EVKRALPKDANPGSGGRGGYQNYGASGTNSNSFDGRSDGNRYMQPQ              
Sbjct: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNSNSFDGRSDGNRYMQPQSTAGGFPPYSGYSV 240

Query: 241 --LWLWGPNSGVPYGSYGSYGVGMYGGANAGFGGPAGPFGNPGAVNAGYLSGAPGAMKSS 300
                 GPNSGVPYGSYGSYGVGMYGGANAGFGGPAGPFGNPGAVNAGYLSGAPGAMKSS
Sbjct: 241 SGYGYGGPNSGVPYGSYGSYGVGMYGGANAGFGGPAGPFGNPGAVNAGYLSGAPGAMKSS 300

Query: 301 WTNQAPGYGGPGYGASPGFGAAAPWNASGTGAPPSAPRGQSPSGASGYGNQGYYGGNDGT 360
           WTNQAPGYGGPGYGASPGFGAAAPWNASGTGAPPSAPRGQSPSGASGYGNQGYYGGNDGT
Sbjct: 301 WTNQAPGYGGPGYGASPGFGAAAPWNASGTGAPPSAPRGQSPSGASGYGNQGYYGGNDGT 360

Query: 361 YGGYGASGGRSASAPNSNVGTGQSGEQHGMSGGYMGSGYGDANGNSGYTGGGWRSDVSQT 420
           YGGYGASGGRSASAPNSNVGTGQSGEQHGMSGGYMGSGYGDANGNSGYTGGGWRSDVSQT
Sbjct: 361 YGGYGASGGRSASAPNSNVGTGQSGEQHGMSGGYMGSGYGDANGNSGYTGGGWRSDVSQT 420

[Close]

BLAST of IVF0026856 vs. NCBI nr
Match: XP_004151998.1 (heterogeneous nuclear ribonucleoprotein 1 [Cucumis sativus] >KGN58288.1 hypothetical protein Csa_017483 [Cucumis sativus])

HSP 1 Score: 776 bits (2004), Expect = 9.96e-282
Identity = 409/436 (93.81%), Postives = 412/436 (94.50%), Query Frame = 0


Query: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSLL 60
           MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSLL
Sbjct: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSLL 60

Query: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSTRSGINNSGRSSGGSGYFRTKKIFVGGLPSA 120
           DQVLQDKHTIDGRQVEAKRALSREEQQTSTRSGINNSGRSSGGSGYFRTKKIFVGGLPSA
Sbjct: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSTRSGINNSGRSSGGSGYFRTKKIFVGGLPSA 120

Query: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180
           LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV
Sbjct: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180

Query: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNSNSFDGRSDGNRYMQPQ-------------- 240
           EVKRALPKDANPGSGGR GYQNYGASGTNSNSFDGRSDGNRYMQPQ              
Sbjct: 181 EVKRALPKDANPGSGGRAGYQNYGASGTNSNSFDGRSDGNRYMQPQSTAGGFPPYSGYSV 240

Query: 241 --LWLWGPNSGVPYGSYGSYGVGMYGGANAGFGGPAGPFGNPGAVNAGYLSGAPGAMKSS 300
                 GPNSGVPYGSYGSYGVGMYGGANAGFGGPAGPFGNPGAVNAGYLSGAPGAMKSS
Sbjct: 241 SGYGYGGPNSGVPYGSYGSYGVGMYGGANAGFGGPAGPFGNPGAVNAGYLSGAPGAMKSS 300

Query: 301 WTNQAPGYGGPGYGASPGFGAAAPWNASGTGAPPSAPRGQSPSGASGYGNQGYYGGNDGT 360
           WTNQAPGYGGPGYGASPGFGAAAPWNASGTGAPPSAPRGQSPSGASGYGNQGYYGGNDGT
Sbjct: 301 WTNQAPGYGGPGYGASPGFGAAAPWNASGTGAPPSAPRGQSPSGASGYGNQGYYGGNDGT 360

Query: 361 YGGYGASGGRSASAPNSNVGTGQSGEQHGMSGGYMGSGYGDANGNSGYTGGGWRSDVSQT 420
           YGGYGASGGR+ASAPNSNVGTGQSGEQHG+SGGYMGSGYGD NGNSGY+ GGWRSD SQT
Sbjct: 361 YGGYGASGGRAASAPNSNVGTGQSGEQHGVSGGYMGSGYGDTNGNSGYSSGGWRSDASQT 420

[Close]

BLAST of IVF0026856 vs. NCBI nr
Match: XP_038887503.1 (heterogeneous nuclear ribonucleoprotein 1-like [Benincasa hispida])

HSP 1 Score: 764 bits (1972), Expect = 7.47e-277
Identity = 402/436 (92.20%), Postives = 407/436 (93.35%), Query Frame = 0


Query: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSLL 60
           MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPS+L
Sbjct: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSVL 60

Query: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSTRSGINNSGRSSGGSGYFRTKKIFVGGLPSA 120
           DQVLQDKHTIDGRQVEAKRALSREEQQTSTRSGINNSGRSSGGSGYFRTKKIFVGGLPSA
Sbjct: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSTRSGINNSGRSSGGSGYFRTKKIFVGGLPSA 120

Query: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180
           LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV
Sbjct: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180

Query: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNSNSFDGRSDGNRYMQPQ-------------- 240
           EVKRALPKDANPGSGGRGGYQNYGASGTN+N+FDGRSD NRYMQPQ              
Sbjct: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNANNFDGRSDSNRYMQPQSTAGGFPPYSGYGV 240

Query: 241 --LWLWGPNSGVPYGSYGSYGVGMYGGANAGFGGPAGPFGNPGAVNAGYLSGAPGAMKSS 300
                 GPNSGVPYGSYGSYGVGMYGGANAGFGGPAGPFGNP AVNAGYLSGAPGAMKSS
Sbjct: 241 SSYGYGGPNSGVPYGSYGSYGVGMYGGANAGFGGPAGPFGNPSAVNAGYLSGAPGAMKSS 300

Query: 301 WTNQAPGYGGPGYGASPGFGAAAPWNASGTGAPPSAPRGQSPSGASGYGNQGYYGGNDGT 360
           W NQAPGYGGPGYGASPGFGAAAPW+ASGTG PPSAPRGQSPSGASGYGNQGYYGGNDGT
Sbjct: 301 WANQAPGYGGPGYGASPGFGAAAPWSASGTGGPPSAPRGQSPSGASGYGNQGYYGGNDGT 360

Query: 361 YGGYGASGGRSASAPNSNVGTGQSGEQHGMSGGYMGSGYGDANGNSGYTGGGWRSDVSQT 420
           YGGYGASGGR ASAPNSNVGTGQSGEQHGMSGGYMGSGYGD NGNSGY+ GGWRSD SQT
Sbjct: 361 YGGYGASGGRGASAPNSNVGTGQSGEQHGMSGGYMGSGYGDTNGNSGYSSGGWRSDASQT 420

[Close]

BLAST of IVF0026856 vs. NCBI nr
Match: KAA0037974.1 (heterogeneous nuclear ribonucleoprotein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 755 bits (1950), Expect = 1.07e-273
Identity = 404/436 (92.66%), Postives = 404/436 (92.66%), Query Frame = 0


Query: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSLL 60
           MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSLL
Sbjct: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSLL 60

Query: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSTRSGINNSGRSSGGSGYFRTKKIFVGGLPSA 120
           DQV            EAKRALSREEQQTSTRSGINNSGRSSGGSGYFRTKKIFVGGLPSA
Sbjct: 61  DQV------------EAKRALSREEQQTSTRSGINNSGRSSGGSGYFRTKKIFVGGLPSA 120

Query: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180
           LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV
Sbjct: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180

Query: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNSNSFDGRSDGNRYMQPQ-------------- 240
           EVKRALPKDANPGSGGRGGYQNYGASGTNSNSFDGRSDGNRYMQPQ              
Sbjct: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNSNSFDGRSDGNRYMQPQSTAGGFPPYSGYSV 240

Query: 241 --LWLWGPNSGVPYGSYGSYGVGMYGGANAGFGGPAGPFGNPGAVNAGYLSGAPGAMKSS 300
                 GPNSGVPYGSYGSYGVGMYGGANAGFGGPAGPFGNPGAVNAGYLSGAPGAMKSS
Sbjct: 241 SGYGYGGPNSGVPYGSYGSYGVGMYGGANAGFGGPAGPFGNPGAVNAGYLSGAPGAMKSS 300

Query: 301 WTNQAPGYGGPGYGASPGFGAAAPWNASGTGAPPSAPRGQSPSGASGYGNQGYYGGNDGT 360
           WTNQAPGYGGPGYGASPGFGAAAPWNASGTGAPPSAPRGQSPSGASGYGNQGYYGGNDGT
Sbjct: 301 WTNQAPGYGGPGYGASPGFGAAAPWNASGTGAPPSAPRGQSPSGASGYGNQGYYGGNDGT 360

Query: 361 YGGYGASGGRSASAPNSNVGTGQSGEQHGMSGGYMGSGYGDANGNSGYTGGGWRSDVSQT 420
           YGGYGASGGRSASAPNSNVGTGQSGEQHGMSGGYMGSGYGDANGNSGYTGGGWRSDVSQT
Sbjct: 361 YGGYGASGGRSASAPNSNVGTGQSGEQHGMSGGYMGSGYGDANGNSGYTGGGWRSDVSQT 420

[Close]

BLAST of IVF0026856 vs. NCBI nr
Match: XP_022963595.1 (heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita moschata])

HSP 1 Score: 737 bits (1902), Expect = 3.32e-266
Identity = 389/436 (89.22%), Postives = 400/436 (91.74%), Query Frame = 0


Query: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSLL 60
           MDSDEGKLFIGGIAWDTSEEKLR+YFSQFGEV QAVIMRDKTTGRPRGFGFVVFSDPS+L
Sbjct: 1   MDSDEGKLFIGGIAWDTSEEKLREYFSQFGEVNQAVIMRDKTTGRPRGFGFVVFSDPSVL 60

Query: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSTRSGINNSGRSSGGSGYFRTKKIFVGGLPSA 120
           DQVLQDKHTIDGRQVEAKRALSREEQQTS+RSGI NSGRSSGGSGYFRTKKIFVGGLPSA
Sbjct: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGIYNSGRSSGGSGYFRTKKIFVGGLPSA 120

Query: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180
           LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV
Sbjct: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180

Query: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNSNSFDGRSDGNRYMQPQ-------------- 240
           EVKRALPKDANPGSGGRGGYQNYGASGTN+N+FDGRSDGNRYMQPQ              
Sbjct: 181 EVKRALPKDANPGSGGRGGYQNYGASGTNANNFDGRSDGNRYMQPQSTAGGFPPYAGYSV 240

Query: 241 --LWLWGPNSGVPYGSYGSYGVGMYGGANAGFGGPAGPFGNPGAVNAGYLSGAPGAMKSS 300
                 GPNSGVPYGSYGSYGVGMYGGAN GFGGPAGPFGNP AVNAGYLSGAPGAMKSS
Sbjct: 241 SSYGYGGPNSGVPYGSYGSYGVGMYGGANTGFGGPAGPFGNPSAVNAGYLSGAPGAMKSS 300

Query: 301 WTNQAPGYGGPGYGASPGFGAAAPWNASGTGAPPSAPRGQSPSGASGYGNQGYYGGNDGT 360
           W NQAPGYGGPGYGASPGFGA APW+ASGT  PP APRGQSPSGASGYGNQGYYGGNDGT
Sbjct: 301 WPNQAPGYGGPGYGASPGFGAGAPWSASGTSGPP-APRGQSPSGASGYGNQGYYGGNDGT 360

Query: 361 YGGYGASGGRSASAPNSNVGTGQSGEQHGMSGGYMGSGYGDANGNSGYTGGGWRSDVSQT 420
           YGGYG SGGR+AS PNSNVG+GQSGE HGM+GGYMGSGYG+ NGNSGY+ GGWRSD SQT
Sbjct: 361 YGGYGTSGGRAASGPNSNVGSGQSGESHGMTGGYMGSGYGETNGNSGYSSGGWRSDASQT 420

[Close]

BLAST of IVF0026856 vs. TAIR 10
Match: AT4G14300.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 381.7 bits (979), Expect = 7.5e-106
Identity = 248/451 (54.99%), Postives = 295/451 (65.41%), Query Frame = 0


Query: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSLL 60
           MDSD+GKLF+GGI+W+T E+KLR++F+ +GEV QA++MRDK TGRPRGFGFV+FSDPS+L
Sbjct: 1   MDSDQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVL 60

Query: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSTRSGINNSGRSSGGSGYFRTKKIFVGGLPSA 120
           D+VLQ+KH+ID R+V+ KRA+SREEQQ S R+G  N+ RSSGG  Y +TKKIFVGGLP  
Sbjct: 61  DRVLQEKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPT 120

Query: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180
           LT++ FRQYFE YG VTDV IMYDQ T RPRGFGF++FD+EDAVD VL+K+FH+L+GK V
Sbjct: 121 LTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGKQV 180

Query: 181 EVKRALPKDANPGSGGR-------GGYQNYGASGTNSNSFDGRSDGNRYMQPQLWLWGPN 240
           EVKRALPKDANPG GGR       GGYQ YG    N +S+DGR D NR++Q Q       
Sbjct: 181 EVKRALPKDANPGGGGRSMGGGGSGGYQGYGG---NESSYDGRMDSNRFLQHQ----SVG 240

Query: 241 SGVP-YGSYGSYGVGMYGGAN-AGFGGPAGPFGNPGAVNAGYLSG-----APGAMKSSWT 300
           +G+P YGS G YG G   G+N AG+G   G  G+ G   AG  +G      PGA   S T
Sbjct: 241 NGLPSYGSSG-YGAGYGNGSNGAGYGAYGGYTGSAGGYGAGATAGYGATNIPGAGYGSST 300

Query: 301 NQAP----------GYGGPGYGASPGFGAAAPWNASGTGAPPSAPRGQSPSGASGYGNQG 360
             AP          GYG PGYG+    GAA     SG G P +AP  QSP   SGY NQG
Sbjct: 301 GVAPRNSWDTPASSGYGNPGYGS----GAA----HSGYGVPGAAPPTQSP---SGYSNQG 360

Query: 361 Y----YGGNDGTYG---GYGASGGRSASAPNSNVGTGQSGEQHGMSGGYMGSGYGDANGN 420
           Y    Y G+D  YG    YG  GGR +   ++N G          SGGYMG GYGD    
Sbjct: 361 YGYGGYSGSDSGYGNQAAYGVVGGRPSGGGSNNPG----------SGGYMGGGYGD---- 410

[Close]

BLAST of IVF0026856 vs. TAIR 10
Match: AT2G33410.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 371.7 bits (953), Expect = 7.8e-103
Identity = 241/435 (55.40%), Postives = 287/435 (65.98%), Query Frame = 0


Query: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSLL 60
           M+SD+GKLFIGGI+WDT E  LR+YFS FGEV+Q  +MR+K TGRPRGFGFV FSDP+++
Sbjct: 1   MESDQGKLFIGGISWDTDENLLREYFSNFGEVLQVTVMREKATGRPRGFGFVAFSDPAVI 60

Query: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSTRSGINNSGRSSGGSGYFRTKKIFVGGLPSA 120
           D+VLQDKH ID R V+ KRA+SREEQ  + RSG  N+ R+       RTKKIFVGGLP A
Sbjct: 61  DRVLQDKHHIDNRDVDVKRAMSREEQSPAGRSGTFNASRNFDSGANVRTKKIFVGGLPPA 120

Query: 121 LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV 180
           LT D FR YFE+YG V+D VIM DQ TQRPRGFGF++FD+ED+VD VL+K+FH+LNGK V
Sbjct: 121 LTSDEFRAYFETYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHKTFHDLNGKQV 180

Query: 181 EVKRALPKDANP--------GSGGRGGYQNYGASGTNSNSFDGRSDGNRYMQPQLWLWG- 240
           EVKRALPKDANP        GSGG GG+  YG SG   + ++GR D NRYMQPQ    G 
Sbjct: 181 EVKRALPKDANPGIASGGGRGSGGAGGFPGYGGSG--GSGYEGRVDSNRYMQPQNTGSGY 240

Query: 241 -PNSGVPYGS---YGSYGVGMYGGANAGFGGPAG-PFGNPGAVNAGYLSGAPGAMKSSWT 300
            P  G  YG+   YGS GVG YGG   G+G PAG P+GNP    AG+ SG     +SSW 
Sbjct: 241 PPYGGSGYGTGYGYGSNGVG-YGGF-GGYGNPAGAPYGNPSVPGAGFGSGP----RSSWG 300

Query: 301 NQAP-GYGGPGYGASPGFGAAAPWNASGTGAPPSAPRGQSPSGASGYGNQGY-YGGNDGT 360
            QAP GYG  GY      G AAPW   G+G P SA  GQ+ + A GYG+QGY YGGND +
Sbjct: 301 AQAPSGYGNVGY------GNAAPW--GGSGGPGSAVMGQAGASA-GYGSQGYGYGGNDSS 360

Query: 361 YG---GYGASGGRSASAPNSNVGTGQSGEQHGMSGGYMGSGYGDANGNSGYTGGGWRSDV 417
           YG    YGA GGRS + PN++ G G +    G        GYG+  GN+G          
Sbjct: 361 YGTPSAYGAVGGRSGNMPNNHGGGGYADALDG------SGGYGNHQGNNG---------- 399

[Close]

BLAST of IVF0026856 vs. TAIR 10
Match: AT5G55550.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 235.7 bits (600), Expect = 6.7e-62
Identity = 181/418 (43.30%), Postives = 240/418 (57.42%), Query Frame = 0


Query: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSLL 60
           M+SD GKLFIGGI+WDT EE+LRDYFS +G+V++AVIMRD+ TGR RGFGF+VF+DP + 
Sbjct: 1   MESDLGKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVS 60

Query: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSTR--SGINNSGRSSGGSGYFRTKKIFVGGLP 120
           ++V+ DKH IDGR VEAK+A+ R++QQ   R  S I+      GG G  RTKKIFVGGLP
Sbjct: 61  ERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGG--RTKKIFVGGLP 120

Query: 121 SALTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGK 180
           S++TE+ F+ YF+ +G + DVV+MYD NTQRPRGFGFITFD++DAVDRVL+K+FHELNGK
Sbjct: 121 SSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFHELNGK 180

Query: 181 LVEVKRALPKDANPGSGGRGGYQNYGASGTNSNSFDGRSDGNRYMQPQLWLWGP---NSG 240
           LVEVKRA+PK+ +P S  R       ASG N      R   N Y     +  GP   NS 
Sbjct: 181 LVEVKRAVPKEISPVSNIRSPL----ASGVNYGGGSNRMPANSYFNN--FAPGPGFYNSL 240

Query: 241 VPYGSYGSYGVGMYGGANAGFGGPAGPFGNPGAVNAGYLSGAPGAMKSSWTNQAPGYGGP 300
            P G   S  +G    A + FG      G    ++        G   +   N+ P     
Sbjct: 241 GPVGRRFSPVIGSGRNAVSAFG-----LGLNHDLSLNLNPSCDGTSSTFGYNRIP----- 300

Query: 301 GYGASPGFGAAAPWNASGTGAPPSAPRGQSPSGASG---YGNQGYYGG--------NDGT 360
              ++P F  A+P   +   +P    R +SP  ++    +GN+    G        N   
Sbjct: 301 ---SNPYFNGASP---NRYTSPIGHNRTESPYNSNNRDLWGNRTDTAGPGWNLNVSNGNN 360

Query: 361 YGGYGASGGRSASAPNSNVGTGQSGEQHGMSGGYMGSGYGDANGNSG--YTGGGWRSD 401
            G +G     S++  N N G G++   +G S G   S +    G+ G  Y GG   SD
Sbjct: 361 RGNWGLPS--SSAVSNDNNGFGRN---YGTSSGLSSSPFNGFEGSIGELYRGGSVYSD 389

[Close]

BLAST of IVF0026856 vs. TAIR 10
Match: AT5G55550.3 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 235.7 bits (600), Expect = 6.7e-62
Identity = 181/418 (43.30%), Postives = 240/418 (57.42%), Query Frame = 0


Query: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSLL 60
           M+SD GKLFIGGI+WDT EE+LRDYFS +G+V++AVIMRD+ TGR RGFGF+VF+DP + 
Sbjct: 1   MESDLGKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVS 60

Query: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSTR--SGINNSGRSSGGSGYFRTKKIFVGGLP 120
           ++V+ DKH IDGR VEAK+A+ R++QQ   R  S I+      GG G  RTKKIFVGGLP
Sbjct: 61  ERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGG--RTKKIFVGGLP 120

Query: 121 SALTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGK 180
           S++TE+ F+ YF+ +G + DVV+MYD NTQRPRGFGFITFD++DAVDRVL+K+FHELNGK
Sbjct: 121 SSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFHELNGK 180

Query: 181 LVEVKRALPKDANPGSGGRGGYQNYGASGTNSNSFDGRSDGNRYMQPQLWLWGP---NSG 240
           LVEVKRA+PK+ +P S  R       ASG N      R   N Y     +  GP   NS 
Sbjct: 181 LVEVKRAVPKEISPVSNIRSPL----ASGVNYGGGSNRMPANSYFNN--FAPGPGFYNSL 240

Query: 241 VPYGSYGSYGVGMYGGANAGFGGPAGPFGNPGAVNAGYLSGAPGAMKSSWTNQAPGYGGP 300
            P G   S  +G    A + FG      G    ++        G   +   N+ P     
Sbjct: 241 GPVGRRFSPVIGSGRNAVSAFG-----LGLNHDLSLNLNPSCDGTSSTFGYNRIP----- 300

Query: 301 GYGASPGFGAAAPWNASGTGAPPSAPRGQSPSGASG---YGNQGYYGG--------NDGT 360
              ++P F  A+P   +   +P    R +SP  ++    +GN+    G        N   
Sbjct: 301 ---SNPYFNGASP---NRYTSPIGHNRTESPYNSNNRDLWGNRTDTAGPGWNLNVSNGNN 360

Query: 361 YGGYGASGGRSASAPNSNVGTGQSGEQHGMSGGYMGSGYGDANGNSG--YTGGGWRSD 401
            G +G     S++  N N G G++   +G S G   S +    G+ G  Y GG   SD
Sbjct: 361 RGNWGLPS--SSAVSNDNNGFGRN---YGTSSGLSSSPFNGFEGSIGELYRGGSVYSD 389

[Close]

BLAST of IVF0026856 vs. TAIR 10
Match: AT5G55550.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 235.7 bits (600), Expect = 6.7e-62
Identity = 181/418 (43.30%), Postives = 240/418 (57.42%), Query Frame = 0


Query: 1   MDSDEGKLFIGGIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSLL 60
           M+SD GKLFIGGI+WDT EE+LRDYFS +G+V++AVIMRD+ TGR RGFGF+VF+DP + 
Sbjct: 1   MESDLGKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVS 60

Query: 61  DQVLQDKHTIDGRQVEAKRALSREEQQTSTR--SGINNSGRSSGGSGYFRTKKIFVGGLP 120
           ++V+ DKH IDGR VEAK+A+ R++QQ   R  S I+      GG G  RTKKIFVGGLP
Sbjct: 61  ERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGG--RTKKIFVGGLP 120

Query: 121 SALTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGK 180
           S++TE+ F+ YF+ +G + DVV+MYD NTQRPRGFGFITFD++DAVDRVL+K+FHELNGK
Sbjct: 121 SSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFHELNGK 180

Query: 181 LVEVKRALPKDANPGSGGRGGYQNYGASGTNSNSFDGRSDGNRYMQPQLWLWGP---NSG 240
           LVEVKRA+PK+ +P S  R       ASG N      R   N Y     +  GP   NS 
Sbjct: 181 LVEVKRAVPKEISPVSNIRSPL----ASGVNYGGGSNRMPANSYFNN--FAPGPGFYNSL 240

Query: 241 VPYGSYGSYGVGMYGGANAGFGGPAGPFGNPGAVNAGYLSGAPGAMKSSWTNQAPGYGGP 300
            P G   S  +G    A + FG      G    ++        G   +   N+ P     
Sbjct: 241 GPVGRRFSPVIGSGRNAVSAFG-----LGLNHDLSLNLNPSCDGTSSTFGYNRIP----- 300

Query: 301 GYGASPGFGAAAPWNASGTGAPPSAPRGQSPSGASG---YGNQGYYGG--------NDGT 360
              ++P F  A+P   +   +P    R +SP  ++    +GN+    G        N   
Sbjct: 301 ---SNPYFNGASP---NRYTSPIGHNRTESPYNSNNRDLWGNRTDTAGPGWNLNVSNGNN 360

Query: 361 YGGYGASGGRSASAPNSNVGTGQSGEQHGMSGGYMGSGYGDANGNSG--YTGGGWRSD 401
            G +G     S++  N N G G++   +G S G   S +    G+ G  Y GG   SD
Sbjct: 361 RGNWGLPS--SSAVSNDNNGFGRN---YGTSSGLSSSPFNGFEGSIGELYRGGSVYSD 389

The following BLAST results are available for this feature:

BLAST of IVF0026856 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W034	1.1e-104	54.99	Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP...	[more]
Q98SJ2	2.7e-44	38.13	DAZ-associated protein 1 OS=Xenopus laevis OX=8355 GN=dazap1 PE=1 SV=1	[more]
P51992	3.1e-40	36.06	Heterogeneous nuclear ribonucleoprotein A3 homolog 2 OS=Xenopus laevis OX=8355 P...	[more]
Q920Q6	5.3e-40	34.72	RNA-binding protein Musashi homolog 2 OS=Mus musculus OX=10090 GN=Msi2 PE=1 SV=1	[more]
P51968	1.2e-39	36.14	Heterogeneous nuclear ribonucleoprotein A3 homolog 1 OS=Xenopus laevis OX=8355 P...	[more]

BLAST of IVF0026856 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BHX8	3.9e-227	95.41	heterogeneous nuclear ribonucleoprotein 1-like OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A0A0L8W1	1.5e-223	93.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G608180 PE=4 SV=1	[more]
A0A5A7T3C9	3.6e-217	92.66	Heterogeneous nuclear ribonucleoprotein 1-like OS=Cucumis melo var. makuwa OX=11...	[more]
A0A6J1HIF4	1.0e-211	89.22	heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1HUK4	7.4e-210	88.53	heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]

BLAST of IVF0026856 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447387.1	1.88e-286	95.41	PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Cucumis melo]	[more]
XP_004151998.1	9.96e-282	93.81	heterogeneous nuclear ribonucleoprotein 1 [Cucumis sativus] >KGN58288.1 hypothet...	[more]
XP_038887503.1	7.47e-277	92.20	heterogeneous nuclear ribonucleoprotein 1-like [Benincasa hispida]	[more]
KAA0037974.1	1.07e-273	92.66	heterogeneous nuclear ribonucleoprotein 1-like [Cucumis melo var. makuwa]	[more]
XP_022963595.1	3.32e-266	89.22	heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita moschata]	[more]

BLAST of IVF0026856 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14300.1	7.5e-106	54.99	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G33410.1	7.8e-103	55.40	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G55550.1	6.7e-62	43.30	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G55550.3	6.7e-62	43.30	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G55550.2	6.7e-62	43.30	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 7..78 e-value: 3.4E-23 score: 93.1 coord: 111..183 e-value: 7.7E-24 score: 95.2
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 112..178 e-value: 3.1E-16 score: 59.0 coord: 8..75 e-value: 1.3E-16 score: 60.2
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 110..187 score: 18.137451
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 6..82 score: 17.915731
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 107..195 e-value: 8.4E-26 score: 92.0
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 1..93 e-value: 1.2E-26 score: 94.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 354..374
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 187..218
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 317..334
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 386..400
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 308..335
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 350..420
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 201..218
None	No IPR available	PANTHER	PTHR48035	HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 1	coord: 1..419
None	No IPR available	PANTHER	PTHR48035:SF1	SUBFAMILY NOT NAMED	coord: 1..419
None	No IPR available	CDD	cd12325	RRM1_hnRNPA_hnRNPD_like	coord: 8..78 e-value: 2.50945E-38 score: 131.169
IPR034131	DAZ-associated protein 1, RNA recognition motif 2	CDD	cd12327	RRM2_DAZAP1	coord: 108..187 e-value: 2.88501E-45 score: 149.438
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 109..214
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 3..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0026856.1	IVF0026856.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding