IVF0026838 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAACCTCATCGCGTGCCCCGTGGCATGTATGGACTAAGAAGGAGGAGGACACTCTTGTAGAGTGTTTAGTGGATTTGGTTGTCATGGAGGATGGAAATCCGACAATGGTACGTTCCGACAAGATTACCTGGCACAACTGGTATGCATGATGGCTGAGAAATTACCAAGATGTCAGGTCCGTGCAACCACTGTAATCGACTGCAGAATAAAGATACTGAAGTGAACATTCCAGGCCATGCAGAAATGCAGGGGCTAACGTGCAGTGAATTTAGTTGGAACGACGACGCAAAATGCATAATTGCGGAGAAGGAACTCTTCGATAACTAGGTTAGGGTAAGGAAAATAATATACACGTCACACTACTTGCGCAATGTATATTTACTTCACAAAATTTCAATCCCTACTTAATAGGGGTTCTCTTTAAATTTTTTGAAGTCGCATCCAGCAATGAAAAGGCTCTTTAACAAACTGTTTCCCTATTACAACAAACTTAAATATGTGTTCGGTCGCGATAGGGCGACGAGTCACTTCGCTGAGACATTCGTCAACGTGGGGTCTAACAAGTCTGGTGGGTATGAGGGTTTTGACATGTCGGATGGGAACGAGGAGTTCCCATCCATGTACAGCCAGGATATTGACATGTCTTAG ATGGCAACCTCATCGCGTGCCCCGTGGCATGTATGGACTAAGAAGGAGGAGGACACTCTTGTAGAGTGTTTAGTGGATTTGGTTGTCATGGAGGATGGAAATCCGACAATGTCGCATCCAGCAATGAAAAGGCTCTTTAACAAACTGTTTCCCTATTACAACAAACTTAAATATGTGTTCGGTCGCGATAGGGCGACGAGTCACTTCGCTGAGACATTCGTCAACGTGGGGTCTAACAAGTCTGGTGGGTATGAGGGTTTTGACATGTCGGATGGGAACGAGGAGTTCCCATCCATGTACAGCCAGGATATTGACATGTCTTAG ATGGCAACCTCATCGCGTGCCCCGTGGCATGTATGGACTAAGAAGGAGGAGGACACTCTTGTAGAGTGTTTAGTGGATTTGGTTGTCATGGAGGATGGAAATCCGACAATGTCGCATCCAGCAATGAAAAGGCTCTTTAACAAACTGTTTCCCTATTACAACAAACTTAAATATGTGTTCGGTCGCGATAGGGCGACGAGTCACTTCGCTGAGACATTCGTCAACGTGGGGTCTAACAAGTCTGGTGGGTATGAGGGTTTTGACATGTCGGATGGGAACGAGGAGTTCCCATCCATGTACAGCCAGGATATTGACATGTCTTAG MATSSRAPWHVWTKKEEDTLVECLVDLVVMEDGNPTMSHPAMKRLFNKLFPYYNKLKYVFGRDRATSHFAETFVNVGSNKSGGYEGFDMSDGNEEFPSMYSQDIDMS Homology
BLAST of IVF0026838 vs. ExPASy TrEMBL
Match: A0A5D3E4X9 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G001200 PE=4 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 1.2e-34 Identity = 81/107 (75.70%), Postives = 85/107 (79.44%), Query Frame = 0
BLAST of IVF0026838 vs. ExPASy TrEMBL
Match: A0A5A7TB06 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold278G00390 PE=3 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 1.2e-31 Identity = 74/118 (62.71%), Postives = 90/118 (76.27%), Query Frame = 0
BLAST of IVF0026838 vs. ExPASy TrEMBL
Match: A0A5D3D4Q6 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00280 PE=3 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 6.6e-30 Identity = 69/107 (64.49%), Postives = 83/107 (77.57%), Query Frame = 0
BLAST of IVF0026838 vs. ExPASy TrEMBL
Match: A0A5A7UWT1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G002690 PE=4 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 6.6e-30 Identity = 69/107 (64.49%), Postives = 83/107 (77.57%), Query Frame = 0
BLAST of IVF0026838 vs. ExPASy TrEMBL
Match: A0A5D3DLD9 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold717G00010 PE=4 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 8.6e-30 Identity = 73/119 (61.34%), Postives = 88/119 (73.95%), Query Frame = 0
BLAST of IVF0026838 vs. NCBI nr
Match: KAA0035633.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK30909.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 154 bits (388), Expect = 2.92e-46 Identity = 81/107 (75.70%), Postives = 85/107 (79.44%), Query Frame = 0
BLAST of IVF0026838 vs. NCBI nr
Match: KAA0060443.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 138 bits (347), Expect = 1.91e-39 Identity = 69/107 (64.49%), Postives = 83/107 (77.57%), Query Frame = 0
BLAST of IVF0026838 vs. NCBI nr
Match: KAA0040490.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK23472.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 143 bits (361), Expect = 2.74e-39 Identity = 74/118 (62.71%), Postives = 90/118 (76.27%), Query Frame = 0
BLAST of IVF0026838 vs. NCBI nr
Match: KAA0055621.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK24447.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 137 bits (345), Expect = 5.88e-39 Identity = 73/119 (61.34%), Postives = 88/119 (73.95%), Query Frame = 0
BLAST of IVF0026838 vs. NCBI nr
Match: KAA0044982.1 (transposase [Cucumis melo var. makuwa]) HSP 1 Score: 132 bits (333), Expect = 9.24e-38 Identity = 68/101 (67.33%), Postives = 80/101 (79.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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