IVF0026657 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTCGGAGATGGCAACGTCTTTCCTCAATCCCCCGCCTCGCTCCGGCTGCCGCACGGTCTGTTCAAGAACCAGAGCCGGAGATTCTGCCATTGGCTCCAACCATCCAAACTCTACAACTTTTTGAACCCACCCCCCCGCCAGTGGCGGCTGCTCCCCCATCTTCCACTCCAGGAGAACCTACTCCTAGTCCTCGCATTTCTCCCCCCGCTGCGTCGCCAAAATATGAAGCTACCGTCATACCAGAGGCCAGCCCTCCGCTGAAACCCGCACGATCACCGCCAGTGTCCCCTCCACGCAAATCTGCTGAACCAAGGAATTCTATTAGCCCTAATTCGTATCAAGAACCTCTCAAGCCAACGACGCCATTACTTTCCACTCTGGTTCTACCCAAATCTTCAGATGTGACGACGATTCCATCCGCTATCAAGCCGGAGGTGGAGCAGAAAACAGGTCCGCTCAAGAAGTCGGATCCGCAGGTAGAGTACGTATCCGGTATGCCGCCGCCGAGCCTACAGGCGAAGGCTATAAACCTCGCAGGAGATAACATTGGCGCGGTAATGAAAATTAACCAATTCTCCGATAAGAGTTCAGGCGGAGAAGTCACGAGGAAGATCGAAACAGAAACCGGCGTCCAACAAGAAAATGACGAGGAGAAAAGTCGCAGAGAAACCGAATTTCCGATGACGCCAATCACGAACAGCAATTTCCAAGAAGTGAACAATTCAGTTGTGTATAATTCGTCTTGCAATAGCCGTGATCCGGGGCTGCATCTTGATTTCTCCGGCAAGAAGGATGAAGCAGCCACTGTGGAGGAAGAGAGGGGAATCGCTTATGATTTCTAA ATGGTCGGAGATGGCAACGTCTTTCCTCAATCCCCCGCCTCGCTCCGGCTGCCGCACGGTCTGTTCAAGAACCAGAGCCGGAGATTCTGCCATTGGCTCCAACCATCCAAACTCTACAACTTTTTGAACCCACCCCCCCGCCATCCTCGCATTTCTCCCCCCGCTGCGTCGCCAAAATATGAAGCTACCGTCATACCAGAGGCCAGCCCTCCGCTGAAACCCGCACGATCACCGCCAGTGTCCCCTCCACGCAAATCTGCTGAACCAAGGAATTCTATTAGCCCTAATTCGTATCAAGAACCTCTCAAGCCAACGACGCCATTACTTTCCACTCTGGTTCTACCCAAATCTTCAGATGTGACGACGATTCCATCCGCTATCAAGCCGGAGGTGGAGCAGAAAACAGGTCCGCTCAAGAAGTCGGATCCGCAGGTAGAGTACGTATCCGGTATGCCGCCGCCGAGCCTACAGGCGAAGGCTATAAACCTCGCAGGAGATAACATTGGCGCGGTAATGAAAATTAACCAATTCTCCGATAAGAGTTCAGGCGGAGAAGTCACGAGGAAGATCGAAACAGAAACCGGCGTCCAACAAGAAAATGACGAGGAGAAAAGTCGCAGAGAAACCGAATTTCCGATGACGCCAATCACGAACAGCAATTTCCAAGAAGTGAACAATTCAGTTGTGTATAATTCGTCTTGCAATAGCCGTGATCCGGGGCTGCATCTTGATTTCTCCGGCAAGAAGGATGAAGCAGCCACTGTGGAGGAAGAGAGGGGAATCGCTTATGATTTCTAA ATGGTCGGAGATGGCAACGTCTTTCCTCAATCCCCCGCCTCGCTCCGGCTGCCGCACGGTCTGTTCAAGAACCAGAGCCGGAGATTCTGCCATTGGCTCCAACCATCCAAACTCTACAACTTTTTGAACCCACCCCCCCGCCATCCTCGCATTTCTCCCCCCGCTGCGTCGCCAAAATATGAAGCTACCGTCATACCAGAGGCCAGCCCTCCGCTGAAACCCGCACGATCACCGCCAGTGTCCCCTCCACGCAAATCTGCTGAACCAAGGAATTCTATTAGCCCTAATTCGTATCAAGAACCTCTCAAGCCAACGACGCCATTACTTTCCACTCTGGTTCTACCCAAATCTTCAGATGTGACGACGATTCCATCCGCTATCAAGCCGGAGGTGGAGCAGAAAACAGGTCCGCTCAAGAAGTCGGATCCGCAGGTAGAGTACGTATCCGGTATGCCGCCGCCGAGCCTACAGGCGAAGGCTATAAACCTCGCAGGAGATAACATTGGCGCGGTAATGAAAATTAACCAATTCTCCGATAAGAGTTCAGGCGGAGAAGTCACGAGGAAGATCGAAACAGAAACCGGCGTCCAACAAGAAAATGACGAGGAGAAAAGTCGCAGAGAAACCGAATTTCCGATGACGCCAATCACGAACAGCAATTTCCAAGAAGTGAACAATTCAGTTGTGTATAATTCGTCTTGCAATAGCCGTGATCCGGGGCTGCATCTTGATTTCTCCGGCAAGAAGGATGAAGCAGCCACTGTGGAGGAAGAGAGGGGAATCGCTTATGATTTCTAA MVGDGNVFPQSPASLRLPHGLFKNQSRRFCHWLQPSKLYNFLNPPPRHPRISPPAASPKYEATVIPEASPPLKPARSPPVSPPRKSAEPRNSISPNSYQEPLKPTTPLLSTLVLPKSSDVTTIPSAIKPEVEQKTGPLKKSDPQVEYVSGMPPPSLQAKAINLAGDNIGAVMKINQFSDKSSGGEVTRKIETETGVQQENDEEKSRRETEFPMTPITNSNFQEVNNSVVYNSSCNSRDPGLHLDFSGKKDEAATVEEERGIAYDF Homology
BLAST of IVF0026657 vs. ExPASy TrEMBL
Match: A0A1S3AVL7 (WW domain-binding protein 11-like OS=Cucumis melo OX=3656 GN=LOC103483160 PE=4 SV=1) HSP 1 Score: 505.4 bits (1300), Expect = 1.5e-139 Identity = 264/281 (93.95%), Postives = 264/281 (93.95%), Query Frame = 0
BLAST of IVF0026657 vs. ExPASy TrEMBL
Match: A0A5D3DB96 (WW domain-binding protein 11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00770 PE=4 SV=1) HSP 1 Score: 412.5 bits (1059), Expect = 1.3e-111 Identity = 218/221 (98.64%), Postives = 218/221 (98.64%), Query Frame = 0
BLAST of IVF0026657 vs. ExPASy TrEMBL
Match: A0A0A0L8G8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119310 PE=4 SV=1) HSP 1 Score: 343.6 bits (880), Expect = 7.4e-91 Identity = 183/215 (85.12%), Postives = 194/215 (90.23%), Query Frame = 0
BLAST of IVF0026657 vs. ExPASy TrEMBL
Match: A0A6J1D1D2 (vegetative cell wall protein gp1-like OS=Momordica charantia OX=3673 GN=LOC111016378 PE=4 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 2.6e-27 Identity = 101/229 (44.10%), Postives = 128/229 (55.90%), Query Frame = 0
BLAST of IVF0026657 vs. ExPASy TrEMBL
Match: A0A6J1D170 (uncharacterized protein LOC111016407 OS=Momordica charantia OX=3673 GN=LOC111016407 PE=4 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 5.6e-22 Identity = 66/112 (58.93%), Postives = 78/112 (69.64%), Query Frame = 0
BLAST of IVF0026657 vs. NCBI nr
Match: XP_008437853.1 (PREDICTED: WW domain-binding protein 11-like [Cucumis melo]) HSP 1 Score: 508 bits (1307), Expect = 1.00e-180 Identity = 264/281 (93.95%), Postives = 264/281 (93.95%), Query Frame = 0
BLAST of IVF0026657 vs. NCBI nr
Match: KAA0048864.1 (WW domain-binding protein 11-like [Cucumis melo var. makuwa] >TYK20816.1 WW domain-binding protein 11-like [Cucumis melo var. makuwa]) HSP 1 Score: 416 bits (1069), Expect = 2.24e-144 Identity = 218/221 (98.64%), Postives = 218/221 (98.64%), Query Frame = 0
BLAST of IVF0026657 vs. NCBI nr
Match: XP_011650663.1 (gibberellin-regulated protein 14 [Cucumis sativus] >KGN56396.1 hypothetical protein Csa_011358 [Cucumis sativus]) HSP 1 Score: 347 bits (890), Expect = 3.10e-117 Identity = 183/215 (85.12%), Postives = 194/215 (90.23%), Query Frame = 0
BLAST of IVF0026657 vs. NCBI nr
Match: XP_022147458.1 (vegetative cell wall protein gp1-like [Momordica charantia]) HSP 1 Score: 136 bits (342), Expect = 1.44e-34 Identity = 101/229 (44.10%), Postives = 130/229 (56.77%), Query Frame = 0
BLAST of IVF0026657 vs. NCBI nr
Match: XP_022147499.1 (uncharacterized protein LOC111016407 [Momordica charantia]) HSP 1 Score: 116 bits (290), Expect = 3.03e-28 Identity = 66/115 (57.39%), Postives = 79/115 (68.70%), Query Frame = 0
BLAST of IVF0026657 vs. TAIR 10
Match: AT2G46630.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 110095 Blast hits to 59224 proteins in 2216 species: Archae - 177; Bacteria - 15429; Metazoa - 38345; Fungi - 18843; Plants - 13341; Viruses - 3084; Other Eukaryotes - 20876 (source: NCBI BLink). ) HSP 1 Score: 44.7 bits (104), Expect = 1.4e-04 Identity = 86/303 (28.38%), Postives = 121/303 (39.93%), Query Frame = 0
BLAST of IVF0026657 vs. TAIR 10
Match: AT1G63310.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G20362.1); Has 78 Blast hits to 77 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 44.3 bits (103), Expect = 1.8e-04 Identity = 29/89 (32.58%), Postives = 43/89 (48.31%), Query Frame = 0
BLAST of IVF0026657 vs. TAIR 10
Match: AT1G75260.1 (oxidoreductases, acting on NADH or NADPH ) HSP 1 Score: 43.5 bits (101), Expect = 3.1e-04 Identity = 31/91 (34.07%), Postives = 41/91 (45.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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