IVF0026622 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACATATTGCGACGACGTTGACAACGTGGACGAGGGGGACTCCACGTACGTGACGACCACTGCTTCAAAAGACATTCACTACTTTGAGACGACAAACGAGTGGTCTCAGTGGTGCGACGAACTAGTCGAATCGATGTTCACTTATTGGTAG ATGACATATTGCGACGACGTTGACAACGTGGACGAGGGGGACTCCACGTACGTGACGACCACTGCTTCAAAAGACATTCACTACTTTGAGACGACAAACGAGTGGTCTCAGTGGTGCGACGAACTAGTCGAATCGATGTTCACTTATTGGTAG ATGACATATTGCGACGACGTTGACAACGTGGACGAGGGGGACTCCACGTACGTGACGACCACTGCTTCAAAAGACATTCACTACTTTGAGACGACAAACGAGTGGTCTCAGTGGTGCGACGAACTAGTCGAATCGATGTTCACTTATTGGTAG MTYCDDVDNVDEGDSTYVTTTASKDIHYFETTNEWSQWCDELVESMFTYW Homology
BLAST of IVF0026622 vs. ExPASy TrEMBL
Match: A0A5A7TCF8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00160 PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 1.3e-20 Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0
BLAST of IVF0026622 vs. ExPASy TrEMBL
Match: A0A5A7VK86 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001570 PE=3 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 1.5e-16 Identity = 43/50 (86.00%), Postives = 46/50 (92.00%), Query Frame = 0
BLAST of IVF0026622 vs. ExPASy TrEMBL
Match: A0A5D3C7D1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold606G00990 PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 4.3e-16 Identity = 42/50 (84.00%), Postives = 46/50 (92.00%), Query Frame = 0
BLAST of IVF0026622 vs. ExPASy TrEMBL
Match: A0A5A7URP2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold132G001330 PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 4.3e-16 Identity = 42/50 (84.00%), Postives = 46/50 (92.00%), Query Frame = 0
BLAST of IVF0026622 vs. ExPASy TrEMBL
Match: A0A5D3DG14 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold523G00260 PE=4 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 5.6e-16 Identity = 41/50 (82.00%), Postives = 45/50 (90.00%), Query Frame = 0
BLAST of IVF0026622 vs. NCBI nr
Match: KAA0040793.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK17774.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 107 bits (267), Expect = 9.21e-29 Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0
BLAST of IVF0026622 vs. NCBI nr
Match: KAA0054051.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYJ96871.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 91.7 bits (226), Expect = 5.30e-23 Identity = 41/50 (82.00%), Postives = 44/50 (88.00%), Query Frame = 0
BLAST of IVF0026622 vs. NCBI nr
Match: KAA0062745.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK22544.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 92.0 bits (227), Expect = 5.47e-22 Identity = 41/50 (82.00%), Postives = 45/50 (90.00%), Query Frame = 0
BLAST of IVF0026622 vs. NCBI nr
Match: TYK07212.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 92.4 bits (228), Expect = 1.62e-21 Identity = 42/50 (84.00%), Postives = 46/50 (92.00%), Query Frame = 0
BLAST of IVF0026622 vs. NCBI nr
Match: KAA0066806.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK27953.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 94.0 bits (232), Expect = 1.88e-21 Identity = 43/50 (86.00%), Postives = 46/50 (92.00%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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