IVF0026611 (gene) Melon (IVF77) v1

Overview


Name	IVF0026611
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	homeobox-leucine zipper protein ATHB-16
Location	chr10: 2613487 .. 2615296 (+)
RNA-Seq Expression	IVF0026611
Synteny	IVF0026611

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAAATTCAAATCTCTCTCTCATCTTCTCTCTTCCTGTCTATGTCTATAAGCAAACCCAACTCACCAAACTTCTTCTTCAACTTCTACTTTTTTCTCCATCTTTGTCCTTTTAAGTTTCTGCATCAACTTATTTATAATTTGCATCAGTTCATGAATCCCACCAGCTCTCTCCATCCCTAAAACTTTCCACATTATCAAACCAATCCACACACACAATCCTACATTTTTCTCACTTCTTCAACCAAAAAAAACAGCTAAAAAGCTTGGATTTTTCACCCTCGTTTGAGAATCCCACATGAACCCATTTCTCAATTATGGATTCTGAAACAACCCATTTTCTATCAAAACCTGAAGCTTCTTCTCTCCCCTGTTTCTGGGTCTCTGATTCTTGCTCTTCCATGAAAGGAGAAGGAACCCTTGGTGGGAAGAAGAGAAGGCTCTCAGTTGATCAAGTTCGGTTGCTTGAGAAGAATTTTAATGATGAGAATAAGCTTGAACATGAGAGGAAAGTTCAGATTGCTGAGGAGATAGGGTTGAGACCTCGTCAAGTTGCGGTTTGGTTTCAGAATCGAAGGGCTCGATCTAAGATGAAAAGAATTGAGAGTGATTATGAATGTTTGAATGCTGAATATGATAAGCTTAAGAGTGATTTTGATAGTCTTCTTAATATGAATCATGAACTCAAAGCAGAGGTATGGACTCTCTGTTTATGGCATTTAAAACTTCAGATCTGTTTAGATATTATCTTCATTGTCGTTTTGTTTCAGTCCCATTCTTATTTATTGTCTACTTTTTGTTCACTTTTTCATGTTCACTCATCTTCCTAAATACGACTTTAATAATTCAAAATCAATTTGGAGTCTAATTTTGTAGTTTTAAGCGTGATATTCATATCATCAACATGATTTTAAACTGATTAAAGATATATCAAGAGTGATTATGAACATGTCATTCCTGATCATGTACATCTAATACTTTAAGATTGTGTTTCACTGGAAAACAACTTTTATCAATAGTTATCAATGTTTTTATCAACTTACAGAAAATGTTTCATTTTGAAACCACTACGTACGGGATTTGAGAATGGTCGTGAACATGTCGCTCCCAAGCATGTACACCTATAAGTTCATTAAGTTGTGTTTCACTCGAAAAACAACTTTTATCAAAAGTTATTTCAAACTCATATTAAGGTATTCTCTACTAGTTCGATCAACTTACTCTTTTATCAAAAGTCTCTCAAACGCACTTTAAACGATTCCTTTTACTAAGTGCATCTACTTAGAGAAAATGTGTTCTATTTCAAAACCACTTTTATCCAAAGTTATCTCAAACTTACTGTAAGCCGGTTTTCTACCAGGTTGATCAACTAAGAGCAAAATGGGCTGCTATGGAGAAGATGAAGAATCATTTTGAACCAGTTGGAGTTGAAGCCATGGTTTCATCAGTTACAGAACTTGAAAAAGCAAAAGCAAAGACAATGGGTGAAATTTTGTATGAAGTTCAAATGGGCTCATCAAGACATGAATTAGAAGGTAGCCTGAGTTCAAGCAAAAGTGATTGTTTTTATTCTGAAAGCCCCACAAGGGAAAACCAATCAAAGTCAGCCAATTTCTTGCAAGATGAAGAAGATGAATTAGGTTACTTAGGGAAACTAGAAGATGAACTTTCTGCCGATGAGCTCATGAATTCCTTTAACATTCTTAGTAGTGCAGTTGAAAATCAATCTTTCTGCTTTTGGTCTTAGTAGATATCGAGTTTAAATAACTATCAGTAAAATGTTTGAATCTACTGAAGATTAGAAATAAAAG

mRNA sequence

CAAAAATTCAAATCTCTCTCTCATCTTCTCTCTTCCTGTCTATGTCTATAAGCAAACCCAACTCACCAAACTTCTTCTTCAACTTCTACTTTTTTCTCCATCTTTGTCCTTTTAAGTTTCTGCATCAACTTATTTATAATTTGCATCAGTTCATGAATCCCACCAGCTCTCTCCATCCCTAAAACTTTCCACATTATCAAACCAATCCACACACACAATCCTACATTTTTCTCACTTCTTCAACCAAAAAAAACAGCTAAAAAGCTTGGATTTTTCACCCTCGTTTGAGAATCCCACATGAACCCATTTCTCAATTATGGATTCTGAAACAACCCATTTTCTATCAAAACCTGAAGCTTCTTCTCTCCCCTGTTTCTGGGTCTCTGATTCTTGCTCTTCCATGAAAGGAGAAGGAACCCTTGGTGGGAAGAAGAGAAGGCTCTCAGTTGATCAAGTTCGGTTGCTTGAGAAGAATTTTAATGATGAGAATAAGCTTGAACATGAGAGGAAAGTTCAGATTGCTGAGGAGATAGGGTTGAGACCTCGTCAAGTTGCGGTTTGGTTTCAGAATCGAAGGGCTCGATCTAAGATGAAAAGAATTGAGAGTGATTATGAATGTTTGAATGCTGAATATGATAAGCTTAAGAGTGATTTTGATAGTCTTCTTAATATGAATCATGAACTCAAAGCAGAGGTTGATCAACTAAGAGCAAAATGGGCTGCTATGGAGAAGATGAAGAATCATTTTGAACCAGTTGGAGTTGAAGCCATGGTTTCATCAGTTACAGAACTTGAAAAAGCAAAAGCAAAGACAATGGGTGAAATTTTGTATGAAGTTCAAATGGGCTCATCAAGACATGAATTAGAAGGTAGCCTGAGTTCAAGCAAAAGTGATTGTTTTTATTCTGAAAGCCCCACAAGGGAAAACCAATCAAAGTCAGCCAATTTCTTGCAAGATGAAGAAGATGAATTAGGTTACTTAGGGAAACTAGAAGATGAACTTTCTGCCGATGAGCTCATGAATTCCTTTAACATTCTTAGTAGTGCAGTTGAAAATCAATCTTTCTGCTTTTGGTCTTAGTAGATATCGAGTTTAAATAACTATCAGTAAAATGTTTGAATCTACTGAAGATTAGAAATAAAAG

Coding sequence (CDS)

ATGGATTCTGAAACAACCCATTTTCTATCAAAACCTGAAGCTTCTTCTCTCCCCTGTTTCTGGGTCTCTGATTCTTGCTCTTCCATGAAAGGAGAAGGAACCCTTGGTGGGAAGAAGAGAAGGCTCTCAGTTGATCAAGTTCGGTTGCTTGAGAAGAATTTTAATGATGAGAATAAGCTTGAACATGAGAGGAAAGTTCAGATTGCTGAGGAGATAGGGTTGAGACCTCGTCAAGTTGCGGTTTGGTTTCAGAATCGAAGGGCTCGATCTAAGATGAAAAGAATTGAGAGTGATTATGAATGTTTGAATGCTGAATATGATAAGCTTAAGAGTGATTTTGATAGTCTTCTTAATATGAATCATGAACTCAAAGCAGAGGTTGATCAACTAAGAGCAAAATGGGCTGCTATGGAGAAGATGAAGAATCATTTTGAACCAGTTGGAGTTGAAGCCATGGTTTCATCAGTTACAGAACTTGAAAAAGCAAAAGCAAAGACAATGGGTGAAATTTTGTATGAAGTTCAAATGGGCTCATCAAGACATGAATTAGAAGGTAGCCTGAGTTCAAGCAAAAGTGATTGTTTTTATTCTGAAAGCCCCACAAGGGAAAACCAATCAAAGTCAGCCAATTTCTTGCAAGATGAAGAAGATGAATTAGGTTACTTAGGGAAACTAGAAGATGAACTTTCTGCCGATGAGCTCATGAATTCCTTTAACATTCTTAGTAGTGCAGTTGAAAATCAATCTTTCTGCTTTTGGTCTTAG

Protein sequence

MDSETTHFLSKPEASSLPCFWVSDSCSSMKGEGTLGGKKRRLSVDQVRLLEKNFNDENKLEHERKVQIAEEIGLRPRQVAVWFQNRRARSKMKRIESDYECLNAEYDKLKSDFDSLLNMNHELKAEVDQLRAKWAAMEKMKNHFEPVGVEAMVSSVTELEKAKAKTMGEILYEVQMGSSRHELEGSLSSSKSDCFYSESPTRENQSKSANFLQDEEDELGYLGKLEDELSADELMNSFNILSSAVENQSFCFWS

Homology

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BLAST of IVF0026611 vs. ExPASy Swiss-Prot
Match: P46668 (Homeobox-leucine zipper protein ATHB-6 OS=Arabidopsis thaliana OX=3702 GN=ATHB-6 PE=1 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.0e-25
Identity = 60/104 (57.69%), Postives = 77/104 (74.04%), Query Frame = 0


Query: 30  KGEGTLGGKKRRLSVDQVRLLEKNFNDENKLEHERKVQIAEEIGLRPRQVAVWFQNRRAR 89
           +G   L  KKRRLS++QV+ LEKNF  ENKLE ERKV++A+E+GL+PRQVAVWFQNRRAR
Sbjct: 54  RGHVGLSEKKRRLSINQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRAR 113

Query: 90  SKMKRIESDYECLNAEYDKLKSDFDSLLNMNHELKAEVDQLRAK 134
            K K++E DY  L  +YD L+ +FDSL   N  L  E+ +L+ K
Sbjct: 114 WKTKQLEKDYGVLKTQYDSLRHNFDSLRRDNESLLQEISKLKTK 157

[Close]

BLAST of IVF0026611 vs. ExPASy Swiss-Prot
Match: Q940J1 (Homeobox-leucine zipper protein ATHB-16 OS=Arabidopsis thaliana OX=3702 GN=ATHB-16 PE=2 SV=2)

HSP 1 Score: 116.7 bits (291), Expect = 3.8e-25
Identity = 66/133 (49.62%), Postives = 86/133 (64.66%), Query Frame = 0


Query: 35  LGGKKRRLSVDQVRLLEKNFNDENKLEHERKVQIAEEIGLRPRQVAVWFQNRRARSKMKR 94
           L  KKRRL VDQV+ LEKNF  ENKLE ERK ++A+E+GL+PRQVAVWFQNRRAR K K+
Sbjct: 56  LSEKKRRLKVDQVKALEKNFELENKLEPERKTKLAQELGLQPRQVAVWFQNRRARWKTKQ 115

Query: 95  IESDYECLNAEYDKLKSDFDSLLNMNHELKAEVDQLRAKWAAMEKMKNHFEPVGVEAMVS 154
           +E DY  L  +YD L+ +FDSL   N  L  E+ +++AK    E   N+      +A+  
Sbjct: 116 LEKDYGVLKGQYDSLRHNFDSLRRDNDSLLQEISKIKAKVNGEEDNNNN------KAITE 175

Query: 155 SVTELEKAKAKTM 168
            V E E  K  ++
Sbjct: 176 GVKEEEVHKTDSI 182

[Close]

BLAST of IVF0026611 vs. ExPASy Swiss-Prot
Match: A2XD08 (Homeobox-leucine zipper protein HOX21 OS=Oryza sativa subsp. indica OX=39946 GN=HOX21 PE=2 SV=2)

HSP 1 Score: 115.9 bits (289), Expect = 6.5e-25
Identity = 59/103 (57.28%), Postives = 79/103 (76.70%), Query Frame = 0


Query: 36  GGKKRRLSVDQVRLLEKNFNDENKLEHERKVQIAEEIGLRPRQVAVWFQNRRARSKMKRI 95
           G KKRRL+V+QVR LEKNF   NKLE ERK+Q+A  +GL+PRQVA+WFQNRRAR K K++
Sbjct: 122 GEKKRRLNVEQVRTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQL 181

Query: 96  ESDYECLNAEYDKLKSDFDSLLNMNHELKAEVDQLRAKWAAME 139
           E DY+ L  + D +K++ D+LLN N +L+AE+  L+ + AA E
Sbjct: 182 EKDYDALKRQLDAVKAENDALLNHNKKLQAEIVALKGREAASE 224

[Close]

BLAST of IVF0026611 vs. ExPASy Swiss-Prot
Match: Q8S7W9 (Homeobox-leucine zipper protein HOX21 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX21 PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 6.5e-25
Identity = 59/103 (57.28%), Postives = 79/103 (76.70%), Query Frame = 0


Query: 36  GGKKRRLSVDQVRLLEKNFNDENKLEHERKVQIAEEIGLRPRQVAVWFQNRRARSKMKRI 95
           G KKRRL+V+QVR LEKNF   NKLE ERK+Q+A  +GL+PRQVA+WFQNRRAR K K++
Sbjct: 128 GEKKRRLNVEQVRTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQL 187

Query: 96  ESDYECLNAEYDKLKSDFDSLLNMNHELKAEVDQLRAKWAAME 139
           E DY+ L  + D +K++ D+LLN N +L+AE+  L+ + AA E
Sbjct: 188 EKDYDALKRQLDAVKAENDALLNHNKKLQAEIVALKGREAASE 230

[Close]

BLAST of IVF0026611 vs. ExPASy Swiss-Prot
Match: Q02283 (Homeobox-leucine zipper protein HAT5 OS=Arabidopsis thaliana OX=3702 GN=HAT5 PE=1 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.5e-24
Identity = 60/111 (54.05%), Postives = 82/111 (73.87%), Query Frame = 0


Query: 38  KKRRLSVDQVRLLEKNFNDENKLEHERKVQIAEEIGLRPRQVAVWFQNRRARSKMKRIES 97
           KKRRL+ +QV LLEK+F  ENKLE ERK Q+A+++GL+PRQVAVWFQNRRAR K K++E 
Sbjct: 68  KKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLER 127

Query: 98  DYECLNAEYDKLKSDFDSLLNMNHELKAEVDQLRAKWAAMEKMKNHFEPVG 149
           DY+ L + YD+L S++DS++  N +L++EV  L  K    ++  N  EP G
Sbjct: 128 DYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSLTEKLQGKQETAN--EPPG 176

[Close]

BLAST of IVF0026611 vs. ExPASy TrEMBL
Match: A0A1S3BER7 (homeobox-leucine zipper protein ATHB-16 OS=Cucumis melo OX=3656 GN=LOC103489083 PE=4 SV=1)

HSP 1 Score: 493.4 bits (1269), Expect = 5.6e-136
Identity = 253/254 (99.61%), Postives = 253/254 (99.61%), Query Frame = 0


Query: 1   MDSETTHFLSKPEASSLPCFWVSDSCSSMKGEGTLGGKKRRLSVDQVRLLEKNFNDENKL 60
           MDSETTHFLSKPEASSLPCFWVSDSCSSMKGEGTLGGKKRRLSVDQVRLLEKNFNDENKL
Sbjct: 1   MDSETTHFLSKPEASSLPCFWVSDSCSSMKGEGTLGGKKRRLSVDQVRLLEKNFNDENKL 60

Query: 61  EHERKVQIAEEIGLRPRQVAVWFQNRRARSKMKRIESDYECLNAEYDKLKSDFDSLLNMN 120
           EHERKVQIAEEIGLRPRQVAVWFQNRRARSKMKRIESDYECLNAEYDKLKSDFDSLLNMN
Sbjct: 61  EHERKVQIAEEIGLRPRQVAVWFQNRRARSKMKRIESDYECLNAEYDKLKSDFDSLLNMN 120

Query: 121 HELKAEVDQLRAKWAAMEKMKNHFEPVGVEAMVSSVTELEKAKAKTMGEILYEVQMGSSR 180
           HELKAEVDQLRAKWAAMEKMKNHFEPVGVEAMVSSVTELEKAKAKTMGEILYEVQMGSSR
Sbjct: 121 HELKAEVDQLRAKWAAMEKMKNHFEPVGVEAMVSSVTELEKAKAKTMGEILYEVQMGSSR 180

Query: 181 HELEGSLSSSKSDCFYSESPTRENQSKSANFLQDEEDELGYLGKLEDELSADELMNSFNI 240
           HELEGSLSSSKSDCFYSESPTRENQSKSANFLQDEEDELGYL KLEDELSADELMNSFNI
Sbjct: 181 HELEGSLSSSKSDCFYSESPTRENQSKSANFLQDEEDELGYLEKLEDELSADELMNSFNI 240

Query: 241 LSSAVENQSFCFWS 255
           LSSAVENQSFCFWS
Sbjct: 241 LSSAVENQSFCFWS 254

[Close]

BLAST of IVF0026611 vs. ExPASy TrEMBL
Match: A0A0A0KVU6 (Homeobox protein OS=Cucumis sativus OX=3659 GN=Csa_5G604260 PE=4 SV=1)

HSP 1 Score: 459.1 bits (1180), Expect = 1.2e-125
Identity = 241/255 (94.51%), Postives = 247/255 (96.86%), Query Frame = 0


Query: 1   MDSETTHFLSKPEASSLPCFWVSDSCSSMKGEG-TLGGKKRRLSVDQVRLLEKNFNDENK 60
           MDSETTHFLSKPEASSLPCFWVSDSCSSMKGEG TLGGKKRRLSVDQVRLLEKNFNDENK
Sbjct: 1   MDSETTHFLSKPEASSLPCFWVSDSCSSMKGEGTTLGGKKRRLSVDQVRLLEKNFNDENK 60

Query: 61  LEHERKVQIAEEIGLRPRQVAVWFQNRRARSKMKRIESDYECLNAEYDKLKSDFDSLLNM 120
           LEHERKVQIAEEIGLRPRQVAVWFQNRRARSKMKRIESDYECL+AEYDKLKSDFDSLLNM
Sbjct: 61  LEHERKVQIAEEIGLRPRQVAVWFQNRRARSKMKRIESDYECLSAEYDKLKSDFDSLLNM 120

Query: 121 NHELKAEVDQLRAKWAAMEKMKNHFEPVGVEAMVSSVTELEKAKAKTMGEILYEVQMGSS 180
           NHELKAEVDQLR  WAA+EKMKNHFEPVGVEAM SSVT+LEKA AKTMGEILY+VQMGSS
Sbjct: 121 NHELKAEVDQLRTTWAAVEKMKNHFEPVGVEAMDSSVTKLEKANAKTMGEILYKVQMGSS 180

Query: 181 RHELEGSLSSSKSDCFYSESPTRENQSKSANFLQDEEDELGYLGKLEDELSADELMNSFN 240
           RHE EGSLSSSKSD FYSESPTR+NQSKSANFLQDEEDELG LGKLEDELSA+ELMNSFN
Sbjct: 181 RHE-EGSLSSSKSDGFYSESPTRDNQSKSANFLQDEEDELGCLGKLEDELSANELMNSFN 240

Query: 241 ILSSAVENQSFCFWS 255
           ILSSAVENQSFCFWS
Sbjct: 241 ILSSAVENQSFCFWS 254

[Close]

BLAST of IVF0026611 vs. ExPASy TrEMBL
Match: A0A5D3CVI2 (Homeobox-leucine zipper protein ATHB-16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00270 PE=4 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 3.1e-118
Identity = 225/226 (99.56%), Postives = 225/226 (99.56%), Query Frame = 0


Query: 29  MKGEGTLGGKKRRLSVDQVRLLEKNFNDENKLEHERKVQIAEEIGLRPRQVAVWFQNRRA 88
           MKGEGTLGGKKRRLSVDQVRLLEKNFNDENKLEHERKVQIAEEIGLRPRQVAVWFQNRRA
Sbjct: 1   MKGEGTLGGKKRRLSVDQVRLLEKNFNDENKLEHERKVQIAEEIGLRPRQVAVWFQNRRA 60

Query: 89  RSKMKRIESDYECLNAEYDKLKSDFDSLLNMNHELKAEVDQLRAKWAAMEKMKNHFEPVG 148
           RSKMKRIESDYECLNAEYDKLKSDFDSLLNMNHELKAEVDQLRAKWAAMEKMKNHFEPVG
Sbjct: 61  RSKMKRIESDYECLNAEYDKLKSDFDSLLNMNHELKAEVDQLRAKWAAMEKMKNHFEPVG 120

Query: 149 VEAMVSSVTELEKAKAKTMGEILYEVQMGSSRHELEGSLSSSKSDCFYSESPTRENQSKS 208
           VEAMVSSVTELEKAKAKTMGEILYEVQMGSSRHELEGSLSSSKSDCFYSESPTRENQSKS
Sbjct: 121 VEAMVSSVTELEKAKAKTMGEILYEVQMGSSRHELEGSLSSSKSDCFYSESPTRENQSKS 180

Query: 209 ANFLQDEEDELGYLGKLEDELSADELMNSFNILSSAVENQSFCFWS 255
           ANFLQDEEDELGYL KLEDELSADELMNSFNILSSAVENQSFCFWS
Sbjct: 181 ANFLQDEEDELGYLEKLEDELSADELMNSFNILSSAVENQSFCFWS 226

[Close]

BLAST of IVF0026611 vs. ExPASy TrEMBL
Match: A0A6J1GYD2 (homeobox-leucine zipper protein ATHB-16-like OS=Cucurbita moschata OX=3662 GN=LOC111458422 PE=4 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 1.4e-86
Identity = 183/265 (69.06%), Postives = 205/265 (77.36%), Query Frame = 0


Query: 1   MDSETTHFLSKPEASSLPCFWVSDSCSSMKGE---------GTLGGKKRRLSVDQVRLLE 60
           MDS+TTH L  PE  SLP  W+SDSCSSM+GE            GGKKRRL++DQVR+LE
Sbjct: 1   MDSDTTHCLPLPE--SLPSLWISDSCSSMEGEFSQPQAKADRNRGGKKRRLTLDQVRMLE 60

Query: 61  KNFNDENKLEHERKVQIAEEIGLRPRQVAVWFQNRRARSKMKRIESDYECLNAEYDKLKS 120
           + FN ENKLEHERKVQIAEEIGLRPRQVAVWFQNRRARSK K+IE DYE LNAEYDKLK+
Sbjct: 61  RTFNAENKLEHERKVQIAEEIGLRPRQVAVWFQNRRARSKTKKIEIDYESLNAEYDKLKN 120

Query: 121 DFDSLLNMNHELKAEVDQLRAKWAAMEKMKNHFEPVGVEAMVSSVTELEKAKAKTMGEIL 180
           DFDSLL +NHELKAEV+QLR KWAA EKM N +EPVG                      L
Sbjct: 121 DFDSLLKVNHELKAEVNQLRDKWAATEKMNNPYEPVGA---------------------L 180

Query: 181 YEVQMGSSRHELEGSLSSSKSDCFYSESPTRENQSKSANFLQDEE--DELGYLGKLEDEL 240
           Y+V+MGSSR E +GS SSSKSD FY+ESPTRENQS+S NFL+DEE  DELGYLG LEDEL
Sbjct: 181 YKVEMGSSRQE-QGSRSSSKSDVFYAESPTRENQSRSGNFLRDEEEDDELGYLGILEDEL 240

Query: 241 SADELMNSFNILSSAVENQSFCFWS 255
           SADELM+SFN++SSA E+QSFCFWS
Sbjct: 241 SADELMDSFNVMSSAAEDQSFCFWS 241

[Close]

BLAST of IVF0026611 vs. ExPASy TrEMBL
Match: A0A6J1KEP6 (homeobox-leucine zipper protein ATHB-7-like OS=Cucurbita maxima OX=3661 GN=LOC111494298 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 4.0e-86
Identity = 183/265 (69.06%), Postives = 203/265 (76.60%), Query Frame = 0


Query: 1   MDSETTHFLSKPEASSLPCFWVSDSCSSMKGE---------GTLGGKKRRLSVDQVRLLE 60
           MDSETTHFL  PE  SLP  W+SDSCSSM+GE            GGKKRRL++DQVR+LE
Sbjct: 57  MDSETTHFLPLPE--SLPSLWISDSCSSMEGEFSQPQAKADRNRGGKKRRLTLDQVRMLE 116

Query: 61  KNFNDENKLEHERKVQIAEEIGLRPRQVAVWFQNRRARSKMKRIESDYECLNAEYDKLKS 120
           + FN E+KLEHERKVQIAEEIGLRPRQVAVWFQNRRARSK K+IE DYE LNAEYDKLK+
Sbjct: 117 RTFNAESKLEHERKVQIAEEIGLRPRQVAVWFQNRRARSKTKKIEIDYESLNAEYDKLKN 176

Query: 121 DFDSLLNMNHELKAEVDQLRAKWAAMEKMKNHFEPVGVEAMVSSVTELEKAKAKTMGEIL 180
           DFDSLL +NHELKAEVDQLR KWAA EK  N +EPVG                      L
Sbjct: 177 DFDSLLKVNHELKAEVDQLRDKWAATEKTNNPYEPVGA---------------------L 236

Query: 181 YEVQMGSSRHELEGSLSSSKSDCFYSESPTRENQSKSANFLQDEE--DELGYLGKLEDEL 240
           Y+V+MGSSR E +GS SSSKSD FY+ESPTRENQS+S NFL+DEE  DELGY G LEDEL
Sbjct: 237 YKVEMGSSRQE-QGSRSSSKSDVFYAESPTRENQSRSGNFLRDEEEDDELGYWGILEDEL 296

Query: 241 SADELMNSFNILSSAVENQSFCFWS 255
           SADELM+SFN++SSA E QSFCFWS
Sbjct: 297 SADELMDSFNVMSSAAEYQSFCFWS 297

[Close]

BLAST of IVF0026611 vs. NCBI nr
Match: XP_008446309.1 (PREDICTED: homeobox-leucine zipper protein ATHB-16 [Cucumis melo])

HSP 1 Score: 488 bits (1257), Expect = 9.98e-174
Identity = 253/254 (99.61%), Postives = 253/254 (99.61%), Query Frame = 0


Query: 1   MDSETTHFLSKPEASSLPCFWVSDSCSSMKGEGTLGGKKRRLSVDQVRLLEKNFNDENKL 60
           MDSETTHFLSKPEASSLPCFWVSDSCSSMKGEGTLGGKKRRLSVDQVRLLEKNFNDENKL
Sbjct: 1   MDSETTHFLSKPEASSLPCFWVSDSCSSMKGEGTLGGKKRRLSVDQVRLLEKNFNDENKL 60

Query: 61  EHERKVQIAEEIGLRPRQVAVWFQNRRARSKMKRIESDYECLNAEYDKLKSDFDSLLNMN 120
           EHERKVQIAEEIGLRPRQVAVWFQNRRARSKMKRIESDYECLNAEYDKLKSDFDSLLNMN
Sbjct: 61  EHERKVQIAEEIGLRPRQVAVWFQNRRARSKMKRIESDYECLNAEYDKLKSDFDSLLNMN 120

Query: 121 HELKAEVDQLRAKWAAMEKMKNHFEPVGVEAMVSSVTELEKAKAKTMGEILYEVQMGSSR 180
           HELKAEVDQLRAKWAAMEKMKNHFEPVGVEAMVSSVTELEKAKAKTMGEILYEVQMGSSR
Sbjct: 121 HELKAEVDQLRAKWAAMEKMKNHFEPVGVEAMVSSVTELEKAKAKTMGEILYEVQMGSSR 180

Query: 181 HELEGSLSSSKSDCFYSESPTRENQSKSANFLQDEEDELGYLGKLEDELSADELMNSFNI 240
           HELEGSLSSSKSDCFYSESPTRENQSKSANFLQDEEDELGYL KLEDELSADELMNSFNI
Sbjct: 181 HELEGSLSSSKSDCFYSESPTRENQSKSANFLQDEEDELGYLEKLEDELSADELMNSFNI 240

Query: 241 LSSAVENQSFCFWS 254
           LSSAVENQSFCFWS
Sbjct: 241 LSSAVENQSFCFWS 254

[Close]

BLAST of IVF0026611 vs. NCBI nr
Match: XP_004135200.1 (homeobox-leucine zipper protein HAT5 [Cucumis sativus] >KGN51881.1 hypothetical protein Csa_008673 [Cucumis sativus])

HSP 1 Score: 454 bits (1169), Expect = 2.58e-160
Identity = 241/255 (94.51%), Postives = 247/255 (96.86%), Query Frame = 0


Query: 1   MDSETTHFLSKPEASSLPCFWVSDSCSSMKGEGT-LGGKKRRLSVDQVRLLEKNFNDENK 60
           MDSETTHFLSKPEASSLPCFWVSDSCSSMKGEGT LGGKKRRLSVDQVRLLEKNFNDENK
Sbjct: 1   MDSETTHFLSKPEASSLPCFWVSDSCSSMKGEGTTLGGKKRRLSVDQVRLLEKNFNDENK 60

Query: 61  LEHERKVQIAEEIGLRPRQVAVWFQNRRARSKMKRIESDYECLNAEYDKLKSDFDSLLNM 120
           LEHERKVQIAEEIGLRPRQVAVWFQNRRARSKMKRIESDYECL+AEYDKLKSDFDSLLNM
Sbjct: 61  LEHERKVQIAEEIGLRPRQVAVWFQNRRARSKMKRIESDYECLSAEYDKLKSDFDSLLNM 120

Query: 121 NHELKAEVDQLRAKWAAMEKMKNHFEPVGVEAMVSSVTELEKAKAKTMGEILYEVQMGSS 180
           NHELKAEVDQLR  WAA+EKMKNHFEPVGVEAM SSVT+LEKA AKTMGEILY+VQMGSS
Sbjct: 121 NHELKAEVDQLRTTWAAVEKMKNHFEPVGVEAMDSSVTKLEKANAKTMGEILYKVQMGSS 180

Query: 181 RHELEGSLSSSKSDCFYSESPTRENQSKSANFLQDEEDELGYLGKLEDELSADELMNSFN 240
           RHE EGSLSSSKSD FYSESPTR+NQSKSANFLQDEEDELG LGKLEDELSA+ELMNSFN
Sbjct: 181 RHE-EGSLSSSKSDGFYSESPTRDNQSKSANFLQDEEDELGCLGKLEDELSANELMNSFN 240

Query: 241 ILSSAVENQSFCFWS 254
           ILSSAVENQSFCFWS
Sbjct: 241 ILSSAVENQSFCFWS 254

[Close]

BLAST of IVF0026611 vs. NCBI nr
Match: KAA0034384.1 (homeobox-leucine zipper protein ATHB-16 [Cucumis melo var. makuwa] >TYK15535.1 homeobox-leucine zipper protein ATHB-16 [Cucumis melo var. makuwa])

HSP 1 Score: 430 bits (1106), Expect = 3.75e-151
Identity = 225/226 (99.56%), Postives = 225/226 (99.56%), Query Frame = 0


Query: 29  MKGEGTLGGKKRRLSVDQVRLLEKNFNDENKLEHERKVQIAEEIGLRPRQVAVWFQNRRA 88
           MKGEGTLGGKKRRLSVDQVRLLEKNFNDENKLEHERKVQIAEEIGLRPRQVAVWFQNRRA
Sbjct: 1   MKGEGTLGGKKRRLSVDQVRLLEKNFNDENKLEHERKVQIAEEIGLRPRQVAVWFQNRRA 60

Query: 89  RSKMKRIESDYECLNAEYDKLKSDFDSLLNMNHELKAEVDQLRAKWAAMEKMKNHFEPVG 148
           RSKMKRIESDYECLNAEYDKLKSDFDSLLNMNHELKAEVDQLRAKWAAMEKMKNHFEPVG
Sbjct: 61  RSKMKRIESDYECLNAEYDKLKSDFDSLLNMNHELKAEVDQLRAKWAAMEKMKNHFEPVG 120

Query: 149 VEAMVSSVTELEKAKAKTMGEILYEVQMGSSRHELEGSLSSSKSDCFYSESPTRENQSKS 208
           VEAMVSSVTELEKAKAKTMGEILYEVQMGSSRHELEGSLSSSKSDCFYSESPTRENQSKS
Sbjct: 121 VEAMVSSVTELEKAKAKTMGEILYEVQMGSSRHELEGSLSSSKSDCFYSESPTRENQSKS 180

Query: 209 ANFLQDEEDELGYLGKLEDELSADELMNSFNILSSAVENQSFCFWS 254
           ANFLQDEEDELGYL KLEDELSADELMNSFNILSSAVENQSFCFWS
Sbjct: 181 ANFLQDEEDELGYLEKLEDELSADELMNSFNILSSAVENQSFCFWS 226

[Close]

BLAST of IVF0026611 vs. NCBI nr
Match: XP_038892732.1 (homeobox-leucine zipper protein ATHB-54 [Benincasa hispida])

HSP 1 Score: 399 bits (1024), Expect = 3.18e-138
Identity = 216/254 (85.04%), Postives = 226/254 (88.98%), Query Frame = 0


Query: 1   MDSETTHFLSKPEASSLPCFWVSDSCSSMKGEGTLGGKKRRLSVDQVRLLEKNFNDENKL 60
           MDSETTHFL K EASSLPCF VSD CSSMKGEG  GGKKRRL+VDQVRLLEKNFNDE KL
Sbjct: 1   MDSETTHFLPKAEASSLPCFLVSDFCSSMKGEGNQGGKKRRLTVDQVRLLEKNFNDEIKL 60

Query: 61  EHERKVQIAEEIGLRPRQVAVWFQNRRARSKMKRIESDYECLNAEYDKLKSDFDSLLNMN 120
           EHERKVQIAEEIGLRPRQVAVWFQNRRARSK KRIESDYE L+ EYDKLK+DFDSLL +N
Sbjct: 61  EHERKVQIAEEIGLRPRQVAVWFQNRRARSKTKRIESDYESLSVEYDKLKNDFDSLLKVN 120

Query: 121 HELKAEVDQLRAKWAAMEKMKNHFEPVGVEAMVSSVTELEKAKAKTMGEILYEVQMGSSR 180
            ELKAEVDQLR KWAA EK KN FEPV VEAM SSVTEL KA  KTM EILY+VQ+GS R
Sbjct: 121 QELKAEVDQLRDKWAASEKKKNSFEPVEVEAMDSSVTELGKANTKTMAEILYKVQLGSYR 180

Query: 181 HELEGSLSSSKSDCFYSESPTRENQSKSANFLQDEEDELGYLGKLEDELSADELMNSFNI 240
            E EGSLSSSKSD FYSESPTRENQSKS NFLQ+EEDELGYLGKLEDELSA+ELM+SFNI
Sbjct: 181 QE-EGSLSSSKSDGFYSESPTRENQSKSGNFLQEEEDELGYLGKLEDELSANELMDSFNI 240

Query: 241 LSSAVENQSFCFWS 254
           LS+AVENQS CFWS
Sbjct: 241 LSNAVENQSLCFWS 253

[Close]

BLAST of IVF0026611 vs. NCBI nr
Match: XP_023537958.1 (homeobox-leucine zipper protein HOX20-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 327 bits (839), Expect = 2.99e-110
Identity = 185/265 (69.81%), Postives = 207/265 (78.11%), Query Frame = 0


Query: 1   MDSETTHFLSKPEASSLPCFWVSDSCSSMKGEGTL---------GGKKRRLSVDQVRLLE 60
           MDS+TTHFL  PE  SLP  W+SDSCSSM+GE +          GGKKRRL++DQVR+LE
Sbjct: 1   MDSKTTHFLPLPE--SLPSLWISDSCSSMEGEFSQPQVKADRNRGGKKRRLTLDQVRMLE 60

Query: 61  KNFNDENKLEHERKVQIAEEIGLRPRQVAVWFQNRRARSKMKRIESDYECLNAEYDKLKS 120
           + FN ENKLEHERKVQIAEEIGLRPRQVAVWFQNRRARSK K+IE DYE LNAEYDKLK+
Sbjct: 61  RTFNAENKLEHERKVQIAEEIGLRPRQVAVWFQNRRARSKTKKIEIDYESLNAEYDKLKN 120

Query: 121 DFDSLLNMNHELKAEVDQLRAKWAAMEKMKNHFEPVGVEAMVSSVTELEKAKAKTMGEIL 180
           DFDSLL +NHELKAEVDQLR KWAA EKMKN +EPVG                       
Sbjct: 121 DFDSLLKVNHELKAEVDQLRDKWAATEKMKNPYEPVGD---------------------F 180

Query: 181 YEVQMGSSRHELEGSLSSSKSDCFYSESPTRENQSKSANFLQDEE--DELGYLGKLEDEL 240
           Y+V+MGSSR E +GS SSSKSD FY+ESPTRENQS+S NFL+DEE  DELGYLG LEDEL
Sbjct: 181 YKVEMGSSRQE-QGSRSSSKSDVFYAESPTRENQSRSGNFLRDEEEDDELGYLGILEDEL 240

Query: 241 SADELMNSFNILSSAVENQSFCFWS 254
           SADELM+SFN++SSA E+QSFCFWS
Sbjct: 241 SADELMDSFNVMSSAAEDQSFCFWS 241

[Close]

BLAST of IVF0026611 vs. TAIR 10
Match: AT2G22430.1 (homeobox protein 6 )

HSP 1 Score: 118.6 bits (296), Expect = 7.2e-27
Identity = 60/104 (57.69%), Postives = 77/104 (74.04%), Query Frame = 0


Query: 30  KGEGTLGGKKRRLSVDQVRLLEKNFNDENKLEHERKVQIAEEIGLRPRQVAVWFQNRRAR 89
           +G   L  KKRRLS++QV+ LEKNF  ENKLE ERKV++A+E+GL+PRQVAVWFQNRRAR
Sbjct: 54  RGHVGLSEKKRRLSINQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRAR 113

Query: 90  SKMKRIESDYECLNAEYDKLKSDFDSLLNMNHELKAEVDQLRAK 134
            K K++E DY  L  +YD L+ +FDSL   N  L  E+ +L+ K
Sbjct: 114 WKTKQLEKDYGVLKTQYDSLRHNFDSLRRDNESLLQEISKLKTK 157

[Close]

BLAST of IVF0026611 vs. TAIR 10
Match: AT4G40060.1 (homeobox protein 16 )

HSP 1 Score: 116.7 bits (291), Expect = 2.7e-26
Identity = 66/133 (49.62%), Postives = 86/133 (64.66%), Query Frame = 0


Query: 35  LGGKKRRLSVDQVRLLEKNFNDENKLEHERKVQIAEEIGLRPRQVAVWFQNRRARSKMKR 94
           L  KKRRL VDQV+ LEKNF  ENKLE ERK ++A+E+GL+PRQVAVWFQNRRAR K K+
Sbjct: 56  LSEKKRRLKVDQVKALEKNFELENKLEPERKTKLAQELGLQPRQVAVWFQNRRARWKTKQ 115

Query: 95  IESDYECLNAEYDKLKSDFDSLLNMNHELKAEVDQLRAKWAAMEKMKNHFEPVGVEAMVS 154
           +E DY  L  +YD L+ +FDSL   N  L  E+ +++AK    E   N+      +A+  
Sbjct: 116 LEKDYGVLKGQYDSLRHNFDSLRRDNDSLLQEISKIKAKVNGEEDNNNN------KAITE 175

Query: 155 SVTELEKAKAKTM 168
            V E E  K  ++
Sbjct: 176 GVKEEEVHKTDSI 182

[Close]

BLAST of IVF0026611 vs. TAIR 10
Match: AT3G01470.1 (homeobox 1 )

HSP 1 Score: 114.8 bits (286), Expect = 1.0e-25
Identity = 60/111 (54.05%), Postives = 82/111 (73.87%), Query Frame = 0


Query: 38  KKRRLSVDQVRLLEKNFNDENKLEHERKVQIAEEIGLRPRQVAVWFQNRRARSKMKRIES 97
           KKRRL+ +QV LLEK+F  ENKLE ERK Q+A+++GL+PRQVAVWFQNRRAR K K++E 
Sbjct: 68  KKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLER 127

Query: 98  DYECLNAEYDKLKSDFDSLLNMNHELKAEVDQLRAKWAAMEKMKNHFEPVG 149
           DY+ L + YD+L S++DS++  N +L++EV  L  K    ++  N  EP G
Sbjct: 128 DYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSLTEKLQGKQETAN--EPPG 176

[Close]

BLAST of IVF0026611 vs. TAIR 10
Match: AT5G65310.1 (homeobox protein 5 )

HSP 1 Score: 110.9 bits (276), Expect = 1.5e-24
Identity = 56/100 (56.00%), Postives = 74/100 (74.00%), Query Frame = 0


Query: 34  TLGGKKRRLSVDQVRLLEKNFNDENKLEHERKVQIAEEIGLRPRQVAVWFQNRRARSKMK 93
           T   KKRRL V+QV+ LEKNF  +NKLE ERKV++A+E+GL+PRQVA+WFQNRRAR K K
Sbjct: 68  TAAEKKRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRARWKTK 127

Query: 94  RIESDYECLNAEYDKLKSDFDSLLNMNHELKAEVDQLRAK 134
           ++E DY  L + +D LK + DSL   N  L  ++ +L+AK
Sbjct: 128 QLERDYGVLKSNFDALKRNRDSLQRDNDSLLGQIKELKAK 167

[Close]

BLAST of IVF0026611 vs. TAIR 10
Match: AT5G65310.2 (homeobox protein 5 )

HSP 1 Score: 110.9 bits (276), Expect = 1.5e-24
Identity = 56/100 (56.00%), Postives = 74/100 (74.00%), Query Frame = 0


Query: 34  TLGGKKRRLSVDQVRLLEKNFNDENKLEHERKVQIAEEIGLRPRQVAVWFQNRRARSKMK 93
           T   KKRRL V+QV+ LEKNF  +NKLE ERKV++A+E+GL+PRQVA+WFQNRRAR K K
Sbjct: 50  TAAEKKRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRARWKTK 109

Query: 94  RIESDYECLNAEYDKLKSDFDSLLNMNHELKAEVDQLRAK 134
           ++E DY  L + +D LK + DSL   N  L  ++ +L+AK
Sbjct: 110 QLERDYGVLKSNFDALKRNRDSLQRDNDSLLGQIKELKAK 149

The following BLAST results are available for this feature:

BLAST of IVF0026611 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P46668	1.0e-25	57.69	Homeobox-leucine zipper protein ATHB-6 OS=Arabidopsis thaliana OX=3702 GN=ATHB-6...	[more]
Q940J1	3.8e-25	49.62	Homeobox-leucine zipper protein ATHB-16 OS=Arabidopsis thaliana OX=3702 GN=ATHB-...	[more]
A2XD08	6.5e-25	57.28	Homeobox-leucine zipper protein HOX21 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]
Q8S7W9	6.5e-25	57.28	Homeobox-leucine zipper protein HOX21 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q02283	1.5e-24	54.05	Homeobox-leucine zipper protein HAT5 OS=Arabidopsis thaliana OX=3702 GN=HAT5 PE=...	[more]

BLAST of IVF0026611 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BER7	5.6e-136	99.61	homeobox-leucine zipper protein ATHB-16 OS=Cucumis melo OX=3656 GN=LOC103489083 ...	[more]
A0A0A0KVU6	1.2e-125	94.51	Homeobox protein OS=Cucumis sativus OX=3659 GN=Csa_5G604260 PE=4 SV=1	[more]
A0A5D3CVI2	3.1e-118	99.56	Homeobox-leucine zipper protein ATHB-16 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A6J1GYD2	1.4e-86	69.06	homeobox-leucine zipper protein ATHB-16-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1KEP6	4.0e-86	69.06	homeobox-leucine zipper protein ATHB-7-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]

BLAST of IVF0026611 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446309.1	9.98e-174	99.61	PREDICTED: homeobox-leucine zipper protein ATHB-16 [Cucumis melo]	[more]
XP_004135200.1	2.58e-160	94.51	homeobox-leucine zipper protein HAT5 [Cucumis sativus] >KGN51881.1 hypothetical ...	[more]
KAA0034384.1	3.75e-151	99.56	homeobox-leucine zipper protein ATHB-16 [Cucumis melo var. makuwa] >TYK15535.1 h...	[more]
XP_038892732.1	3.18e-138	85.04	homeobox-leucine zipper protein ATHB-54 [Benincasa hispida]	[more]
XP_023537958.1	2.99e-110	69.81	homeobox-leucine zipper protein HOX20-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of IVF0026611 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G22430.1	7.2e-27	57.69	homeobox protein 6	[more]
AT4G40060.1	2.7e-26	49.62	homeobox protein 16	[more]
AT3G01470.1	1.0e-25	54.05	homeobox 1	[more]
AT5G65310.1	1.5e-24	56.00	homeobox protein 5	[more]
AT5G65310.2	1.5e-24	56.00	homeobox protein 5	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 85..140
None	No IPR available	GENE3D	1.10.10.60		coord: 33..98 e-value: 3.5E-17 score: 63.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 183..209
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 183..208
None	No IPR available	PANTHER	PTHR24326	HOMEOBOX-LEUCINE ZIPPER PROTEIN	coord: 37..225
None	No IPR available	PANTHER	PTHR24326:SF575	HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT5-LIKE	coord: 37..225
IPR000047	Helix-turn-helix motif	PRINTS	PR00031	HTHREPRESSR	coord: 73..89 score: 58.88 coord: 64..73 score: 31.26
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 36..97 e-value: 7.4E-15 score: 65.4
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 38..91 e-value: 1.9E-15 score: 56.5
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 38..93 score: 16.114748
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 38..91 e-value: 1.5467E-14 score: 64.572
IPR003106	Leucine zipper, homeobox-associated	PFAM	PF02183	HALZ	coord: 93..133 e-value: 1.5E-12 score: 47.5
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 68..91
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 17..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0026611.1	IVF0026611.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding