IVF0026592 (gene) Melon (IVF77) v1

Overview
NameIVF0026592
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr10: 1240216 .. 1240895 (-)
RNA-Seq ExpressionIVF0026592
SyntenyIVF0026592
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTCTGATTGTGGACCAATCTTTTGATGATGATGATAATAAAGGAAAGAACCAGGCTTCAGTTCAGATTCACAAACTTCCCTTCTGCTCTTTATCTAAGTCAGAGTCTCAGCTGCATTTTCCCGTGTAAGATTCTTTCCCTTCATGGCTGGAAAACAGTGGTCAAAACCCACCCTTTTTTCTTGTTCATCTTCCTCAATTTCTTACCTTTTTTGTTAATTGATTTGATTCTTCAATTGGGTCGATGCTGGTTTCTGTTATTTCAATGTTGTTAGCTTAGTTTTTTGTGTTTGAATTCTAGGTTTAATTGATAAACTTGTGAATTGTCTTCTAGACTGCTTGTTTGAGTTGCATCTTCACTTGGGTTTTGTTTAGTTTCCGATTTTTTTTAATGATTTGTTGGTAAATAAAGTTTGTTGCATACTCTTTTTATTTGATGTTAGGTGGTGCTTATGTTTTGATTTGAAGTTTTGCTTGTGGAAGGACTGACTAGTTTAAGAGTTCATAAGCAATAAATTGGGTTAAATTGGTTTTAAATTGCAATGTAAATTGAGTTCTGGATCTTGGAAAGTAATGGCAGAATACTTTTCAATGGAATCCAGCAGCTTGTCCCCCATTAAGGCGAATCGGCTCAGAAGAAAACCGGTGGAGTTTCGATTTAGACTCACTTTGAACTGA

mRNA sequence

ATGACTCTGATTGTGGACCAATCTTTTGATGATGATGATAATAAAGGAAAGAACCAGGCTTCAGTTCAGATTCACAAACTTCCCTTCTGCTCTTTATCTAAGTCAGAGTCTCAGCTGCATTTTCCCGTCAGCTTGTCCCCCATTAAGGCGAATCGGCTCAGAAGAAAACCGGTGGAGTTTCGATTTAGACTCACTTTGAACTGA

Coding sequence (CDS)

ATGACTCTGATTGTGGACCAATCTTTTGATGATGATGATAATAAAGGAAAGAACCAGGCTTCAGTTCAGATTCACAAACTTCCCTTCTGCTCTTTATCTAAGTCAGAGTCTCAGCTGCATTTTCCCGTCAGCTTGTCCCCCATTAAGGCGAATCGGCTCAGAAGAAAACCGGTGGAGTTTCGATTTAGACTCACTTTGAACTGA

Protein sequence

MTLIVDQSFDDDDNKGKNQASVQIHKLPFCSLSKSESQLHFPVSLSPIKANRLRRKPVEFRFRLTLN
Homology
[Close]
BLAST of IVF0026592 vs. ExPASy TrEMBL
Match: A0A0A0KUK8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G610510 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.0e-25
Identity = 62/67 (92.54%), Postives = 63/67 (94.03%), Query Frame = 0 

Query: 1  MTLIVDQSFDDDDNKGKNQASVQIHKLPFCSLSKSESQLHFPVSLSPIKANRLRRKPVEF 60
          MTLIVDQSFDDDDNKGKNQASVQIHKLPFCS SKSESQLHFPVS SPIKANRLRRK V F
Sbjct: 1  MTLIVDQSFDDDDNKGKNQASVQIHKLPFCSFSKSESQLHFPVSFSPIKANRLRRKLVAF 60

Query: 61 RFRLTLN 68
          RFRL+LN
Sbjct: 61 RFRLSLN 67

[Close]
BLAST of IVF0026592 vs. NCBI nr
Match: KGN52117.1 (hypothetical protein Csa_008869 [Cucumis sativus])

HSP 1 Score: 124 bits (311), Expect = 1.57e-35
Identity = 62/67 (92.54%), Postives = 63/67 (94.03%), Query Frame = 0 

Query: 1  MTLIVDQSFDDDDNKGKNQASVQIHKLPFCSLSKSESQLHFPVSLSPIKANRLRRKPVEF 60
          MTLIVDQSFDDDDNKGKNQASVQIHKLPFCS SKSESQLHFPVS SPIKANRLRRK V F
Sbjct: 1  MTLIVDQSFDDDDNKGKNQASVQIHKLPFCSFSKSESQLHFPVSFSPIKANRLRRKLVAF 60

Query: 61 RFRLTLN 67
          RFRL+LN
Sbjct: 61 RFRLSLN 67

The following BLAST results are available for this feature:
BLAST of IVF0026592 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0026592 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KUK81.0e-2592.54Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G610510 PE=4 SV=1[more]
BLAST of IVF0026592 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN52117.11.57e-3592.54hypothetical protein Csa_008869 [Cucumis sativus][more]
BLAST of IVF0026592 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0026592.1IVF0026592.1mRNA