IVF0026586 (gene) Melon (IVF77) v1

Overview


Name	IVF0026586
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	RAB6-interacting golgin
Location	chr12: 10568216 .. 10571437 (+)
RNA-Seq Expression	IVF0026586
Synteny	IVF0026586

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAGCCATTGCGGCGGGTTAGGGTTTGGCCACCTAACAGAGAAAGAAAATCATCATCATCATTTGCGAGAGAGAGATTGAGGATGACGACGCAGAAACAGAGCTGGGAGGCACAACAGATGCAGAGAGTGAAGAACTCGGGGATGATAAGCAGCAATGTGAATAATGGGATTGGGAGTCCGTTGAAGGAGGATCAAGAGGAGGAGATTTCAAGATCGGCATTGGCTCTGTTTAGGGCTAAGGAAGAGGAAATAGAGAGGAAGAAGATGGAGATGAGGGAGAAGGTAGAAGCTCGCCTTGGACGAGCTGAAGAAGCTACGAAGCGATTGGCGGAGATTCGCGAAGTAAGTTAAGCTTGAAATCCACCATTTGATGAACATAATAAGATGATTGATGCATTGCATGGTTGGTTCCATTGATTAGGAACTTGAAGGAATGACGGATCCGATGAGGAAGGAAGTTTCATTCATACGGAAGAAGATTGATTTGGTGAACAAAGAGTTGAAGCCATTGGGACTCACTTGCCAAAAGAAGGTCACAATTTCAATTTTCAAATTACTTCCTCTCTTCAATCAATCTCTCATAGTAACGCTACTTTTTTTTTTCTCTTCTTTTTAATCACCTTTCATTTCATTTCATTTCAAAATCCATGGAATTTTATTATTTGATTTGAATTTTATTTAAATTCAACAATTGACATTTTTAACTTTTGGATTTTCGTCAAACGTCCACCATTTTGTTTTGTTTTTGTTTTTGTTTTTTTTTTTTTGTTAATTGTAATGAAAAATAATCAAACTTAATAAATTATATTATTTAAATTAATTTTATACATCTTCCCTTAAAAAAAAAAATCTATATTTAGTGAAATATCTAAGTTAAAAAGGTATATCCTGAAACATATGAATTTAAATTTATAACCATTTCAACTCAAAACTAAATAATAAAGTTTATATTTTAAATTTTAGAACAAAATAGAAACTAAATTCACTTAGGTAAAAATGTATTTTTGTTTTTTTCTCATAAATAAATAAATAAATACTCAGGGTTACAATTTTATCCTTAAAAAAACATTTGGATTGCAAATATATTCTTTCATGGGTATAAATATTAAATATTTGAATGTCTTTTTGAATAATTAATGTTTGTATGTGAATTGTATGATAATTATTGTACGAAGGTCGAATATTTGTGTTCAAATTCTATAACTTGTATATAAAAACTAAAATCAAATAACTAGATAATCAACTAAAGAGTTATTTACAAAATGAAACTATTTACAAAATATAATAATATATATGGATGAATTTTACTATATTTTATAATTAATTTCAATATTATAAATATTTTCATATTGGGTTATTTTTCAAAATATCCAATAATGTAACAGATAATTAAATTTAACATCAATTAATTTATCATTATATTAATTAATAAAAGAAATAAAAATATATAATTACTTTTTAGTTAAACGTAATAACTAAAATAATTAAACTAATCTAAATTAATTAGAATATTGATAACTAACTACAATAGTTTATCTTAAATAAATAGTTTAGGTAGATGAAAAAAATATACTAGTTGAAATCTATTAAGTTTAAATAATATATTTATATTTAAAAATTAATTTAAATTAAAATAGTAATGAATATTTGATTTTAATTTATTAAGTAATTAAGCTATATTTTTTAATATTCTTCTTCCATATATAAAATTCCATACACTTTTGTAAGTTACTAAAAACCTATGTGAGATTGGGTTTTAAAGTTTGTAGATAATAATATCTTGGAGTAAAATGAATACTAAACATCTATAAGAGATTTTATTGAAAAACATAGGGAGCTAAATTAAGTTTTGGTGGTACCATAGTCCCTTCATCAAATTTTTCATTTTACACATAGACTATGAAATTTTTGTTTCATATTCAATTTTTATTTGATGAAGGGACTAAAAACAAATTTAGCTCTCTATGTTTTTCCTCAAGCTTGAAATCTCAAAATTTACATTTTTTAAGAGTTAAACTTTAACATATAAGAACTTTTAATTTTGTTGTAGATTCACTCTAAGTTTCAAATTTTGTATTAATGTGTTAAAAACCTATTAGGGTACATATGATATAAATATATAATAAAAAATATATGGAGTTGTTATTTTTTTAGAGCTCATAAATTAATACATTACATTTTTTTTTTTGAAGGTAATACATGAATGTCATATTAAAAAACACACCACAATTTATAAACTATAATAATAATACAAAAAAATGTTTTAAATGACAACACTATTAAAAATATTTATAAATATAACAAAATTTTATAGTTCATTAATGATATATATAGAGATAGATAACTATTAGTATCTATTATCATCTATTAGTGATAAATTATAGATTTTGTTATATTTGTAAACATTCTAGTTCATTTTACAATATTTGGAAGAAAAAAACTAGATATTAAAAGATTAATAATCCGAAAAGATTTGTGATTTCAAAATTTTTAAAAGACTTAAACAAGTCTATACCCATTATAGCCCTTGGTGACATGATAAAATAAAAATGATATACATATACTTGTTTTGTTTATTTTTGTGTGTGGGAGAGAGTTGAAGAAGTATATTAGTGTGCATAACTAATATTTTGATTTATTTGGTCTCTATCAGGAGAGAGAATACAAAGAAGTGTTAGATTTATTTAACGAGAAGAACAGAGAGAAATCTCAATTGGTATCCAAACTAATGGAGGTGACTTTTATTTCTTTCCTTTCCATAACCGTTTATTTGTGGTCGAAGTTATTAATTTTAGTATTCTTTTCAAAAATAACAAAATAAATTAAAAAATATTTATAAATATAATAACATATCATTATTTATCATCGATACATATTATCATTTATCGTTGATGGATGTCTAACAATTTGAATAACTTGTTGGTCAGTTGGTGAATGAAAGCGAAAAATTGAGGATGAGGAAGCTGGAAGAGCTGAGCAAGAACATTGACATCCTGCATTAAGAAGTGTTCTTCTAAGTTCTAACTTGAATTAATCACCAACAACTTTGTTTGTATTTCCACATTTTTTTCTCCTCAACTCTCATATACATATCTTTTCTTTTTCGAAGTTTCCCATCAGAAGAAAAAAAAAAGAGAGAGGAGGGAGAAAAAAATGGAATTAACTTTGCCAACAAATGGGAATGACGTTTGCTTGTATTAATAAGTTTGATCACAACCAC

mRNA sequence

TAAAGCCATTGCGGCGGGTTAGGGTTTGGCCACCTAACAGAGAAAGAAAATCATCATCATCATTTGCGAGAGAGAGATTGAGGATGACGACGCAGAAACAGAGCTGGGAGGCACAACAGATGCAGAGAGTGAAGAACTCGGGGATGATAAGCAGCAATGTGAATAATGGGATTGGGAGTCCGTTGAAGGAGGATCAAGAGGAGGAGATTTCAAGATCGGCATTGGCTCTGTTTAGGGCTAAGGAAGAGGAAATAGAGAGGAAGAAGATGGAGATGAGGGAGAAGGTAGAAGCTCGCCTTGGACGAGCTGAAGAAGCTACGAAGCGATTGGCGGAGATTCGCGAAGAACTTGAAGGAATGACGGATCCGATGAGGAAGGAAGTTTCATTCATACGGAAGAAGATTGATTTGGTGAACAAAGAGTTGAAGCCATTGGGACTCACTTGCCAAAAGAAGGAGAGAGAATACAAAGAAGTGTTAGATTTATTTAACGAGAAGAACAGAGAGAAATCTCAATTGGTATCCAAACTAATGGAGTTGGTGAATGAAAGCGAAAAATTGAGGATGAGGAAGCTGGAAGAGCTGAGCAAGAACATTGACATCCTGCATTAAGAAGTGTTCTTCTAAGTTCTAACTTGAATTAATCACCAACAACTTTGTTTGTATTTCCACATTTTTTTCTCCTCAACTCTCATATACATATCTTTTCTTTTTCGAAGTTTCCCATCAGAAGAAAAAAAAAAGAGAGAGGAGGGAGAAAAAAATGGAATTAACTTTGCCAACAAATGGGAATGACGTTTGCTTGTATTAATAAGTTTGATCACAACCAC

Coding sequence (CDS)

ATGACGACGCAGAAACAGAGCTGGGAGGCACAACAGATGCAGAGAGTGAAGAACTCGGGGATGATAAGCAGCAATGTGAATAATGGGATTGGGAGTCCGTTGAAGGAGGATCAAGAGGAGGAGATTTCAAGATCGGCATTGGCTCTGTTTAGGGCTAAGGAAGAGGAAATAGAGAGGAAGAAGATGGAGATGAGGGAGAAGGTAGAAGCTCGCCTTGGACGAGCTGAAGAAGCTACGAAGCGATTGGCGGAGATTCGCGAAGAACTTGAAGGAATGACGGATCCGATGAGGAAGGAAGTTTCATTCATACGGAAGAAGATTGATTTGGTGAACAAAGAGTTGAAGCCATTGGGACTCACTTGCCAAAAGAAGGAGAGAGAATACAAAGAAGTGTTAGATTTATTTAACGAGAAGAACAGAGAGAAATCTCAATTGGTATCCAAACTAATGGAGTTGGTGAATGAAAGCGAAAAATTGAGGATGAGGAAGCTGGAAGAGCTGAGCAAGAACATTGACATCCTGCATTAA

Protein sequence

MTTQKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH

Homology

[Close]

BLAST of IVF0026586 vs. ExPASy TrEMBL
Match: A0A5D3CH78 (RAB6-interacting golgin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold315G001010 PE=3 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 6.4e-83
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MTTQKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERK 60
           MTTQKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERK
Sbjct: 1   MTTQKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERK 60

Query: 61  KMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGLT 120
           KMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGLT
Sbjct: 61  KMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGLT 120

Query: 121 CQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH 176
           CQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH
Sbjct: 121 CQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH 175

[Close]

BLAST of IVF0026586 vs. ExPASy TrEMBL
Match: A0A1S3CFV6 (RAB6-interacting golgin OS=Cucumis melo OX=3656 GN=LOC103500274 PE=3 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 6.4e-83
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MTTQKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERK 60
           MTTQKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERK
Sbjct: 1   MTTQKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERK 60

Query: 61  KMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGLT 120
           KMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGLT
Sbjct: 61  KMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGLT 120

Query: 121 CQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH 176
           CQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH
Sbjct: 121 CQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH 175

[Close]

BLAST of IVF0026586 vs. ExPASy TrEMBL
Match: A0A0A0LY59 (RAB6-interacting golgin OS=Cucumis sativus OX=3659 GN=Csa_1G153510 PE=3 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 6.6e-80
Identity = 172/175 (98.29%), Postives = 174/175 (99.43%), Query Frame = 0


Query: 1   MTTQKQSWEAQQMQRVKNSGMISSNVNNG-IGSPLKEDQEEEISRSALALFRAKEEEIER 60
           MTTQKQSWEAQQMQRVKNSGMISSNVNNG IGSPLKEDQEEEISRSALALFRAKEEEIER
Sbjct: 1   MTTQKQSWEAQQMQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIER 60

Query: 61  KKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGL 120
           KKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGL
Sbjct: 61  KKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGL 120

Query: 121 TCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDIL 175
           TCQKKEREYKEVLDLFNEKN+EKSQLVSKLMELVNESEKLRM+KLEELSKNIDIL
Sbjct: 121 TCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDIL 175

[Close]

BLAST of IVF0026586 vs. ExPASy TrEMBL
Match: A0A6J1CNF1 (RAB6-interacting golgin OS=Momordica charantia OX=3673 GN=LOC111012700 PE=3 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 5.1e-72
Identity = 160/179 (89.39%), Postives = 167/179 (93.30%), Query Frame = 0


Query: 1   MTTQKQSWEAQ----QMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEE 60
           MTTQKQSWEAQ    QMQRV+NSGMIS    N IGSPLKEDQ+EE+SRSA ALFRAKEEE
Sbjct: 1   MTTQKQSWEAQAQQSQMQRVRNSGMISH--VNAIGSPLKEDQDEELSRSAFALFRAKEEE 60

Query: 61  IERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKP 120
           IERKKMEMR+KVEARLGRAEEATKRLAEIREELE M DPMRKEVSFIRKKIDLVNKELKP
Sbjct: 61  IERKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPMRKEVSFIRKKIDLVNKELKP 120

Query: 121 LGLTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH 176
           LGLTCQKKEREYKEVL+LFNEKNREKSQLV+KLMELVNESEKLRM+KLEELSKNIDILH
Sbjct: 121 LGLTCQKKEREYKEVLELFNEKNREKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH 177

[Close]

BLAST of IVF0026586 vs. ExPASy TrEMBL
Match: A0A6J1I589 (RAB6-interacting golgin OS=Cucurbita maxima OX=3661 GN=LOC111469338 PE=3 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.4e-66
Identity = 148/175 (84.57%), Postives = 156/175 (89.14%), Query Frame = 0


Query: 1   MTTQKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERK 60
           MTTQKQSWEAQQ Q       +   V   IGSP +EDQEEE+SRSALALFRAKEEEIERK
Sbjct: 1   MTTQKQSWEAQQSQ-------MQQRVKKAIGSPAREDQEEELSRSALALFRAKEEEIERK 60

Query: 61  KMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGLT 120
           KMEMREKVE RLGRAEEATKRLAEIREELEGMTDPMRKEVS IRKKIDLVNKELKPLG+T
Sbjct: 61  KMEMREKVENRLGRAEEATKRLAEIREELEGMTDPMRKEVSLIRKKIDLVNKELKPLGIT 120

Query: 121 CQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH 176
           CQKKEREYKEVL+L NEKN+EKSQLV+KLMELVNESEKLRM+KLEELS NIDILH
Sbjct: 121 CQKKEREYKEVLELLNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSNNIDILH 168

[Close]

BLAST of IVF0026586 vs. NCBI nr
Match: XP_008461743.1 (PREDICTED: probable DNA double-strand break repair Rad50 ATPase [Cucumis melo] >KAA0040914.1 putative DNA double-strand break repair Rad50 ATPase [Cucumis melo var. makuwa] >TYK10622.1 putative DNA double-strand break repair Rad50 ATPase [Cucumis melo var. makuwa])

HSP 1 Score: 314 bits (805), Expect = 1.94e-107
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MTTQKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERK 60
           MTTQKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERK
Sbjct: 1   MTTQKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERK 60

Query: 61  KMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGLT 120
           KMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGLT
Sbjct: 61  KMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGLT 120

Query: 121 CQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH 175
           CQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH
Sbjct: 121 CQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH 175

[Close]

BLAST of IVF0026586 vs. NCBI nr
Match: XP_004139478.1 (uncharacterized protein LOC101203874 [Cucumis sativus] >KGN64906.1 hypothetical protein Csa_022823 [Cucumis sativus])

HSP 1 Score: 304 bits (779), Expect = 1.84e-103
Identity = 172/175 (98.29%), Postives = 174/175 (99.43%), Query Frame = 0


Query: 1   MTTQKQSWEAQQMQRVKNSGMISSNVNNGI-GSPLKEDQEEEISRSALALFRAKEEEIER 60
           MTTQKQSWEAQQMQRVKNSGMISSNVNNGI GSPLKEDQEEEISRSALALFRAKEEEIER
Sbjct: 1   MTTQKQSWEAQQMQRVKNSGMISSNVNNGIIGSPLKEDQEEEISRSALALFRAKEEEIER 60

Query: 61  KKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGL 120
           KKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGL
Sbjct: 61  KKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGL 120

Query: 121 TCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDIL 174
           TCQKKEREYKEVLDLFNEKN+EKSQLVSKLMELVNESEKLRM+KLEELSKNIDIL
Sbjct: 121 TCQKKEREYKEVLDLFNEKNKEKSQLVSKLMELVNESEKLRMKKLEELSKNIDIL 175

[Close]

BLAST of IVF0026586 vs. NCBI nr
Match: XP_038893849.1 (uncharacterized protein LOC120082661 [Benincasa hispida])

HSP 1 Score: 287 bits (735), Expect = 1.00e-96
Identity = 167/179 (93.30%), Postives = 172/179 (96.09%), Query Frame = 0


Query: 1   MTTQKQSWEAQQ---MQRVKNSG-MISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEE 60
           MTT KQSWEAQQ   MQRVKNSG MISSNVN  IGSP+KEDQEEEISRSALA+FRAKEEE
Sbjct: 1   MTTPKQSWEAQQSQQMQRVKNSGVMISSNVN-AIGSPVKEDQEEEISRSALAVFRAKEEE 60

Query: 61  IERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKP 120
           IERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKP
Sbjct: 61  IERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKP 120

Query: 121 LGLTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH 175
           LGLTCQKKEREYKEVLDLFNEKN+EKSQLV+KLMELVNESEKLRM+KLEELSKNIDILH
Sbjct: 121 LGLTCQKKEREYKEVLDLFNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH 178

[Close]

BLAST of IVF0026586 vs. NCBI nr
Match: XP_022142637.1 (uncharacterized protein LOC111012700 [Momordica charantia])

HSP 1 Score: 278 bits (711), Expect = 4.40e-93
Identity = 160/179 (89.39%), Postives = 167/179 (93.30%), Query Frame = 0


Query: 1   MTTQKQSWEAQ----QMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEE 60
           MTTQKQSWEAQ    QMQRV+NSGMIS    N IGSPLKEDQ+EE+SRSA ALFRAKEEE
Sbjct: 1   MTTQKQSWEAQAQQSQMQRVRNSGMISHV--NAIGSPLKEDQDEELSRSAFALFRAKEEE 60

Query: 61  IERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKP 120
           IERKKMEMR+KVEARLGRAEEATKRLAEIREELE M DPMRKEVSFIRKKIDLVNKELKP
Sbjct: 61  IERKKMEMRDKVEARLGRAEEATKRLAEIREELEAMADPMRKEVSFIRKKIDLVNKELKP 120

Query: 121 LGLTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH 175
           LGLTCQKKEREYKEVL+LFNEKNREKSQLV+KLMELVNESEKLRM+KLEELSKNIDILH
Sbjct: 121 LGLTCQKKEREYKEVLELFNEKNREKSQLVAKLMELVNESEKLRMKKLEELSKNIDILH 177

[Close]

BLAST of IVF0026586 vs. NCBI nr
Match: XP_022970344.1 (uncharacterized protein LOC111469338 [Cucurbita maxima])

HSP 1 Score: 260 bits (664), Expect = 4.68e-86
Identity = 148/175 (84.57%), Postives = 156/175 (89.14%), Query Frame = 0


Query: 1   MTTQKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERK 60
           MTTQKQSWEAQQ Q       +   V   IGSP +EDQEEE+SRSALALFRAKEEEIERK
Sbjct: 1   MTTQKQSWEAQQSQ-------MQQRVKKAIGSPAREDQEEELSRSALALFRAKEEEIERK 60

Query: 61  KMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGLT 120
           KMEMREKVE RLGRAEEATKRLAEIREELEGMTDPMRKEVS IRKKIDLVNKELKPLG+T
Sbjct: 61  KMEMREKVENRLGRAEEATKRLAEIREELEGMTDPMRKEVSLIRKKIDLVNKELKPLGIT 120

Query: 121 CQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDILH 175
           CQKKEREYKEVL+L NEKN+EKSQLV+KLMELVNESEKLRM+KLEELS NIDILH
Sbjct: 121 CQKKEREYKEVLELLNEKNKEKSQLVAKLMELVNESEKLRMKKLEELSNNIDILH 168

[Close]

BLAST of IVF0026586 vs. TAIR 10
Match: AT2G27740.1 (Family of unknown function (DUF662) )

HSP 1 Score: 195.3 bits (495), Expect = 4.2e-50
Identity = 110/176 (62.50%), Postives = 146/176 (82.95%), Query Frame = 0


Query: 1   MTTQKQSWEAQQ---MQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEI 60
           M T +Q  E  Q   +QR+K+SG IS N     GSP+ +++EEE+S+SA ALF+AKE+EI
Sbjct: 1   MATTRQILEQPQSPFIQRIKSSGNISMN-----GSPMIDEKEEELSQSAFALFKAKEDEI 60

Query: 61  ERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPL 120
           ER+KME++++V+ +LG AEEAT+RLAEIREELE +TDPMRKE+S IRK++D +N+ELKPL
Sbjct: 61  ERRKMEVKDRVQKKLGLAEEATRRLAEIREELEALTDPMRKEISAIRKRVDAINRELKPL 120

Query: 121 GLTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNIDI 174
           G +CQ+KERE+KE L+ +NEKN+EK+  VSKL+ELV ESEKLRM KLEELSK+I+I
Sbjct: 121 GQSCQRKEREFKEALEAYNEKNKEKAIFVSKLVELVTESEKLRMTKLEELSKSIEI 171

[Close]

BLAST of IVF0026586 vs. TAIR 10
Match: AT3G09980.1 (Family of unknown function (DUF662) )

HSP 1 Score: 193.0 bits (489), Expect = 2.1e-49
Identity = 104/138 (75.36%), Postives = 124/138 (89.86%), Query Frame = 0


Query: 38  QEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMR 97
           ++EE+SR+AL+ FRAKEEEIE+KKME+RE+V+A+LGR EE TKRLA IREELEG+ DPMR
Sbjct: 41  EDEEMSRTALSAFRAKEEEIEKKKMEIRERVQAQLGRVEEETKRLALIREELEGLADPMR 100

Query: 98  KEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESE 157
           KEV+ +RKKID VNKELKPLG T QKKEREYKE L+ FNEKNREK QL+++LMELV ESE
Sbjct: 101 KEVAMVRKKIDSVNKELKPLGHTVQKKEREYKEALEAFNEKNREKVQLITRLMELVGESE 160

Query: 158 KLRMRKLEELSKNIDILH 176
           K+RM+KLEELSKNID +H
Sbjct: 161 KMRMKKLEELSKNIDSIH 178

[Close]

BLAST of IVF0026586 vs. TAIR 10
Match: AT3G52920.2 (Family of unknown function (DUF662) )

HSP 1 Score: 184.1 bits (466), Expect = 9.6e-47
Identity = 99/135 (73.33%), Postives = 122/135 (90.37%), Query Frame = 0


Query: 38  QEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMR 97
           ++EE++RSAL+ FRAKE+EIE++KME+RE+V+A+LGR EE T+RLA IREELE M DPMR
Sbjct: 27  EDEEMARSALSAFRAKEDEIEKRKMEVRERVKAQLGRVEEETRRLASIREELETMADPMR 86

Query: 98  KEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNREKSQLVSKLMELVNESE 157
           KEV+++RKKID VNKELKPLG T QKKEREYKE LD FNEKNREK QL++KLMELV ESE
Sbjct: 87  KEVNWVRKKIDSVNKELKPLGSTVQKKEREYKEALDTFNEKNREKVQLITKLMELVGESE 146

Query: 158 KLRMRKLEELSKNID 173
           KLR++KL+ELS++ID
Sbjct: 147 KLRLKKLDELSRSID 161

[Close]

BLAST of IVF0026586 vs. TAIR 10
Match: AT2G36410.2 (Family of unknown function (DUF662) )

HSP 1 Score: 180.6 bits (457), Expect = 1.1e-45
Identity = 107/169 (63.31%), Postives = 132/169 (78.11%), Query Frame = 0


Query: 4   QKQSWEAQQMQRVKNSGMISSNVNNGIGSPLKEDQEEEISRSALALFRAKEEEIERKKME 63
           Q QS    Q Q+  N  ++ +   +      +ED  EE++RSAL+ FRAKE+EIE+++ME
Sbjct: 24  QPQSQPQPQPQQQSNEMVLHTGSLSFSSHMSRED--EEMTRSALSAFRAKEDEIEKRRME 83

Query: 64  MREKVEARLGRAEEATKRLAEIREELEGMTDPMRKEVSFIRKKIDLVNKELKPLGLTCQK 123
           +RE+++A+LGR E+ TKRL+ IREELE M DPMRKEVS +RKKID VNKELKPLG T QK
Sbjct: 84  VRERIQAQLGRVEQETKRLSTIREELESMADPMRKEVSVVRKKIDSVNKELKPLGSTVQK 143

Query: 124 KEREYKEVLDLFNEKNREKSQLVSKLMELVNESEKLRMRKLEELSKNID 173
           KEREYKE LD FNEKNREK QL++KLMELV ESEKLRM KLEELSK+I+
Sbjct: 144 KEREYKEALDTFNEKNREKVQLITKLMELVGESEKLRMIKLEELSKSIE 190

[Close]

BLAST of IVF0026586 vs. TAIR 10
Match: AT3G52920.1 (Family of unknown function (DUF662) )

HSP 1 Score: 178.7 bits (452), Expect = 4.0e-45
Identity = 99/138 (71.74%), Postives = 122/138 (88.41%), Query Frame = 0


Query: 38  QEEEISRSALALFRAKEEEIERKKMEMREKVEARLGRAEEATKRLAEIREELEGMTDPMR 97
           ++EE++RSAL+ FRAKE+EIE++KME+RE+V+A+LGR EE T+RLA IREELE M DPMR
Sbjct: 27  EDEEMARSALSAFRAKEDEIEKRKMEVRERVKAQLGRVEEETRRLASIREELETMADPMR 86

Query: 98  KEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLDLFNEKNREKSQLVSKLME---LVN 157
           KEV+++RKKID VNKELKPLG T QKKEREYKE LD FNEKNREK QL++KLME   LV 
Sbjct: 87  KEVNWVRKKIDSVNKELKPLGSTVQKKEREYKEALDTFNEKNREKVQLITKLMEMGQLVG 146

Query: 158 ESEKLRMRKLEELSKNID 173
           ESEKLR++KL+ELS++ID
Sbjct: 147 ESEKLRLKKLDELSRSID 164

The following BLAST results are available for this feature:

BLAST of IVF0026586 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0026586 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CH78	6.4e-83	100.00	RAB6-interacting golgin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CFV6	6.4e-83	100.00	RAB6-interacting golgin OS=Cucumis melo OX=3656 GN=LOC103500274 PE=3 SV=1	[more]
A0A0A0LY59	6.6e-80	98.29	RAB6-interacting golgin OS=Cucumis sativus OX=3659 GN=Csa_1G153510 PE=3 SV=1	[more]
A0A6J1CNF1	5.1e-72	89.39	RAB6-interacting golgin OS=Momordica charantia OX=3673 GN=LOC111012700 PE=3 SV=1	[more]
A0A6J1I589	1.4e-66	84.57	RAB6-interacting golgin OS=Cucurbita maxima OX=3661 GN=LOC111469338 PE=3 SV=1	[more]

BLAST of IVF0026586 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008461743.1	1.94e-107	100.00	PREDICTED: probable DNA double-strand break repair Rad50 ATPase [Cucumis melo] >...	[more]
XP_004139478.1	1.84e-103	98.29	uncharacterized protein LOC101203874 [Cucumis sativus] >KGN64906.1 hypothetical ...	[more]
XP_038893849.1	1.00e-96	93.30	uncharacterized protein LOC120082661 [Benincasa hispida]	[more]
XP_022142637.1	4.40e-93	89.39	uncharacterized protein LOC111012700 [Momordica charantia]	[more]
XP_022970344.1	4.68e-86	84.57	uncharacterized protein LOC111469338 [Cucurbita maxima]	[more]

BLAST of IVF0026586 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G27740.1	4.2e-50	62.50	Family of unknown function (DUF662)	[more]
AT3G09980.1	2.1e-49	75.36	Family of unknown function (DUF662)	[more]
AT3G52920.2	9.6e-47	73.33	Family of unknown function (DUF662)	[more]
AT2G36410.2	1.1e-45	63.31	Family of unknown function (DUF662)	[more]
AT3G52920.1	4.0e-45	71.74	Family of unknown function (DUF662)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 121..155
None	No IPR available	COILS	Coil	Coil	coord: 47..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..38
None	No IPR available	PANTHER	PTHR21470:SF16	SUBFAMILY NOT NAMED	coord: 1..174
IPR007033	RAB6-interacting golgin	PFAM	PF04949	Transcrip_act	coord: 30..172 e-value: 1.0E-70 score: 236.6
IPR007033	RAB6-interacting golgin	PANTHER	PTHR21470	RAB6-INTERACTING PROTEIN GORAB	coord: 1..174

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0026586.2	IVF0026586.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005794	Golgi apparatus