IVF0026557 (gene) Melon (IVF77) v1

Overview
NameIVF0026557
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr05: 2295511 .. 2296230 (-)
RNA-Seq ExpressionIVF0026557
SyntenyIVF0026557
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTGAAATCCCCATCTTAAAAACAATTATATAAGAACAATATTAACCCTTTTTTTTCTTTCTAAAATAAAGTAAAACAAAAAAAAAAGACAAAAGAAAAACATATAGTGATCATATTGATTGGTTTGACCAAAATGGGAATTTCTAAAGTGCTTTCATTTGTTTGCGTCATCGCCATCTTGGTTTCCAAAGTCGCCGACGCCGATTCCGACCACTTCGGGATCCACGCGGTGGGGCACGCGGTGGAGCCGTTCTGCCCAGGTGGATACTCCGACAGAGGGGACCACTGCCAGCACCTCGGCCGTATCAGCTCCGTTAACTACAACGAGAATGACGACGACGACGATGACGAATTTGACGACAGGTATAAAGTAGTGGGAAAACTTTCGGTGTCGGTTTCACCGGACGCCGAAGATCAGGCCGACGGTTTAGAACTTGGTACCATTTCACCTGATCAACAGCTTTCCAATAATGTAATCGTCTTGGGGCATTGATGATTTTGGTTCCATTTTTAATTAATTACCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTACATTTTTTTAATCTTTATTAATTATTTCATGACATTTTCTTTTTAAAATCAATCCTATGTATGGTTTTCTTTTTCATCTCTTTTGATTGGTAGAAAGTTTGGAACTTTAATATGATCGAATTGTTTGGGGTTCCTTGTGATTAATTATTTACATGATCAT

mRNA sequence

ATTTGAAATCCCCATCTTAAAAACAATTATATAAGAACAATATTAACCCTTTTTTTTCTTTCTAAAATAAAGTAAAACAAAAAAAAAAGACAAAAGAAAAACATATAGTGATCATATTGATTGGTTTGACCAAAATGGGAATTTCTAAAGTGCTTTCATTTGTTTGCGTCATCGCCATCTTGGTTTCCAAAGTCGCCGACGCCGATTCCGACCACTTCGGGATCCACGCGGTGGGGCACGCGGTGGAGCCGTTCTGCCCAGGTGGATACTCCGACAGAGGGGACCACTGCCAGCACCTCGGCCGTATCAGCTCCGTTAACTACAACGAGAATGACGACGACGACGATGACGAATTTGACGACAGGTATAAAGTAGTGGGAAAACTTTCGGTGTCGGTTTCACCGGACGCCGAAGATCAGGCCGACGGTTTAGAACTTGGTACCATTTCACCTGATCAACAGCTTTCCAATAATGTAATCGTCTTGGGGCATTGATGATTTTGGTTCCATTTTTAATTAATTACCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTACATTTTTTTAATCTTTATTAATTATTTCATGACATTTTCTTTTTAAAATCAATCCTATGTATGGTTTTCTTTTTCATCTCTTTTGATTGGTAGAAAGTTTGGAACTTTAATATGATCGAATTGTTTGGGGTTCCTTGTGATTAATTATTTACATGATCAT

Coding sequence (CDS)

ATGGGAATTTCTAAAGTGCTTTCATTTGTTTGCGTCATCGCCATCTTGGTTTCCAAAGTCGCCGACGCCGATTCCGACCACTTCGGGATCCACGCGGTGGGGCACGCGGTGGAGCCGTTCTGCCCAGGTGGATACTCCGACAGAGGGGACCACTGCCAGCACCTCGGCCGTATCAGCTCCGTTAACTACAACGAGAATGACGACGACGACGATGACGAATTTGACGACAGGTATAAAGTAGTGGGAAAACTTTCGGTGTCGGTTTCACCGGACGCCGAAGATCAGGCCGACGGTTTAGAACTTGGTACCATTTCACCTGATCAACAGCTTTCCAATAATGTAATCGTCTTGGGGCATTGA

Protein sequence

MGISKVLSFVCVIAILVSKVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHLGRISSVNYNENDDDDDDEFDDRYKVVGKLSVSVSPDAEDQADGLELGTISPDQQLSNNVIVLGH
Homology
BLAST of IVF0026557 vs. ExPASy TrEMBL
Match: A0A5A7V7L4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold212G00280 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 4.0e-60
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0

Query: 1   MGISKVLSFVCVIAILVSKVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHLGRISS 60
           MGISKVLSFVCVIAILVSKVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHLGRISS
Sbjct: 1   MGISKVLSFVCVIAILVSKVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHLGRISS 60

Query: 61  VNYNENDDDDDDEFDDRYKVVGKLSVSVSPDAEDQADGLELGTISPDQQLSNNVIVLGH 120
           VNYNENDDDDDDEFDDRYKVVGKLSVSVSPDAEDQADGLELGTISPDQQLSNNVIVLGH
Sbjct: 61  VNYNENDDDDDDEFDDRYKVVGKLSVSVSPDAEDQADGLELGTISPDQQLSNNVIVLGH 119

BLAST of IVF0026557 vs. ExPASy TrEMBL
Match: A0A0A0KE60 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G421690 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 1.9e-46
Identity = 100/120 (83.33%), Postives = 106/120 (88.33%), Query Frame = 0

Query: 1   MGISKVLSFVCVIAILVSKVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHLGRISS 60
           MGISK LSFVCVIAIL+ KVADAD+DHFGIHAVGHAVEPFCPGGYSDRGDHCQHLGRISS
Sbjct: 4   MGISKGLSFVCVIAILICKVADADADHFGIHAVGHAVEPFCPGGYSDRGDHCQHLGRISS 63

Query: 61  VNYNENDDDDDDEFDDRYKVVGKLSVSVSPD-AEDQADGLELGTISPDQQLSNNVIVLGH 120
           VNYNEN  DDDDEFDD YKVVGKLS S+SP+ AED+ADGLELG  SP  +LS   IVLGH
Sbjct: 64  VNYNEN--DDDDEFDDTYKVVGKLSASLSPEAAEDRADGLELGIFSPHDRLSVKEIVLGH 121

BLAST of IVF0026557 vs. ExPASy TrEMBL
Match: A0A2N9FLD3 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15974 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 4.3e-06
Identity = 44/117 (37.61%), Postives = 64/117 (54.70%), Query Frame = 0

Query: 12  VIAILVSKVADAD-SDHFG-IHAVGHAVEPFCPGGYSDRGDHCQHLGRISSVNYNENDDD 71
           ++ +L+ KV++AD SDH+  IH + H     C G + + GD C+            NDDD
Sbjct: 16  LVCLLLIKVSEADESDHYAPIHVIKHD-GIHCDGAHPNNGDQCR------------NDDD 75

Query: 72  D----DDEFDDRYKVVGKLSVSVSP---DAEDQADGLELGTISPDQQLSNNVIVLGH 120
           D    DD+ DD YKVV K+SVS S     +    D  E    S +++L+N++IVLGH
Sbjct: 76  DNEEVDDDVDDTYKVVNKMSVSFSASTGQSSSSEDPSESDATSTEEELNNHMIVLGH 119

BLAST of IVF0026557 vs. ExPASy TrEMBL
Match: A0A7N2MB50 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.4e-04
Identity = 41/110 (37.27%), Postives = 60/110 (54.55%), Query Frame = 0

Query: 10  VCVIAILVSKVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHLGRISSVNYNENDDD 69
           VC++ + V++  D++ ++  IHAV H  +  C GG ++ GD C+        + N+N D 
Sbjct: 17  VCLLLMKVTEANDSEPNYAPIHAVRHDGK-HCDGGQANNGDQCRE-------DDNKNVDV 76

Query: 70  DDDEFDDRYKVVGKLSVSVSPDAEDQADGLELGTISPDQQLSNNVIVLGH 120
           DDD  DD YKVV K+SVS +  A    D L+         L N+V VLGH
Sbjct: 77  DDD-VDDTYKVVNKMSVSFTTSAGQSMDPLD----PSFDDLENHVTVLGH 113

BLAST of IVF0026557 vs. NCBI nr
Match: KAA0061659.1 (hypothetical protein E6C27_scaffold212G00280 [Cucumis melo var. makuwa])

HSP 1 Score: 238 bits (608), Expect = 3.23e-79
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0

Query: 1   MGISKVLSFVCVIAILVSKVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHLGRISS 60
           MGISKVLSFVCVIAILVSKVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHLGRISS
Sbjct: 1   MGISKVLSFVCVIAILVSKVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHLGRISS 60

Query: 61  VNYNENDDDDDDEFDDRYKVVGKLSVSVSPDAEDQADGLELGTISPDQQLSNNVIVLGH 119
           VNYNENDDDDDDEFDDRYKVVGKLSVSVSPDAEDQADGLELGTISPDQQLSNNVIVLGH
Sbjct: 61  VNYNENDDDDDDEFDDRYKVVGKLSVSVSPDAEDQADGLELGTISPDQQLSNNVIVLGH 119

BLAST of IVF0026557 vs. NCBI nr
Match: KAE8647343.1 (hypothetical protein Csa_003811 [Cucumis sativus])

HSP 1 Score: 176 bits (446), Expect = 1.58e-54
Identity = 90/105 (85.71%), Postives = 97/105 (92.38%), Query Frame = 0

Query: 1   MGISKVLSFVCVIAILVSKVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHLGRISS 60
           MGISK LSFVCVIAIL+ KVADAD+DHFGIHAVGHAVEPFCPGGYSDRGDHCQHLGRISS
Sbjct: 4   MGISKGLSFVCVIAILICKVADADADHFGIHAVGHAVEPFCPGGYSDRGDHCQHLGRISS 63

Query: 61  VNYNENDDDDDDEFDDRYKVVGKLSVSVSPDA-EDQADGLELGTI 104
           VNYNENDDDD  EFDD YKVVGKLS S+SP+A ED+ADGLEL ++
Sbjct: 64  VNYNENDDDD--EFDDTYKVVGKLSASLSPEAAEDRADGLELESL 106

BLAST of IVF0026557 vs. NCBI nr
Match: KAG6572424.1 (hypothetical protein SDJN03_29152, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 148 bits (374), Expect = 1.42e-43
Identity = 77/118 (65.25%), Postives = 92/118 (77.97%), Query Frame = 0

Query: 11  CVIAILVS----KVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHLGRISSVNYNEN 70
           C +AI +S    K+A AD  HFGIHA+GHAVEPFCPGGYSDRGDHC H+GRI+SVNY E 
Sbjct: 2   CFLAIFISLLFIKLAHADPHHFGIHAIGHAVEPFCPGGYSDRGDHCNHIGRITSVNYGE- 61

Query: 71  DDDDDDEFDDRYKVVGKLSVSVS-----PDAEDQADGLELGTISPDQQLSNNVIVLGH 119
            DDDDD+FDD YKV+GKLS+++S      DAE +A GLEL  ISP++QLS+ V VLGH
Sbjct: 62  -DDDDDDFDDTYKVLGKLSMAMSVSESTDDAEKEAVGLELEDISPEEQLSDKVTVLGH 117

BLAST of IVF0026557 vs. NCBI nr
Match: KAG6589281.1 (hypothetical protein SDJN03_17846, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 80.9 bits (198), Expect = 6.94e-17
Identity = 55/128 (42.97%), Postives = 79/128 (61.72%), Query Frame = 0

Query: 1   MGISKVLSFVCVIAILVS----KVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHLG 60
           M ISK LSF+ ++AI +     +VADA S H G HA    VE  CPGG    G+HC H G
Sbjct: 1   MPISKGLSFLGLVAIFICLLFIEVADAHSGHSGTHA----VEKPCPGG----GEHCHHSG 60

Query: 61  RISSVNYNENDDDDDDEFDDRYK--VVGKLSVSVSP---DAEDQADGLELGTISPDQQLS 119
           R+++        D+DD+FDD YK  V G++++S+S    DAE++A  +E+ T SP++  +
Sbjct: 61  RMAAQTV-----DEDDDFDDTYKAPVKGRMAMSMSESTEDAEERAVEMEIETTSPEEPAN 115

BLAST of IVF0026557 vs. NCBI nr
Match: XP_023874233.1 (uncharacterized protein LOC111986789 [Quercus suber])

HSP 1 Score: 57.0 bits (136), Expect = 1.43e-07
Identity = 41/110 (37.27%), Postives = 63/110 (57.27%), Query Frame = 0

Query: 10  VCVIAILVSKVADADSDHFGIHAVGHAVEPFCPGGYSDRGDHCQHLGRISSVNYNENDDD 69
           VC++ + V++  D++ ++  IHAV H  +  C GG+++ GD C+        + N+N D 
Sbjct: 17  VCLLLMKVAEANDSEPNYAPIHAVRHDGK-HCDGGHANNGDQCRE-------DDNKNVDV 76

Query: 70  DDDEFDDRYKVVGKLSVSVSPDAEDQADGLELGTISPDQQLSNNVIVLGH 119
           DDD  D+ YKVV K+SVS +  A    D L++   S D    N+V VLGH
Sbjct: 77  DDD-VDETYKVVNKMSVSFTTSAGQSMDPLDVPNPSLDD-FENHVTVLGH 116

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7V7L44.0e-60100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0KE601.9e-4683.33Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G421690 PE=4 SV=1[more]
A0A2N9FLD34.3e-0637.61Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15974 PE=4 SV=1[more]
A0A7N2MB501.4e-0437.27Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAA0061659.13.23e-79100.00hypothetical protein E6C27_scaffold212G00280 [Cucumis melo var. makuwa][more]
KAE8647343.11.58e-5485.71hypothetical protein Csa_003811 [Cucumis sativus][more]
KAG6572424.11.42e-4365.25hypothetical protein SDJN03_29152, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6589281.16.94e-1742.97hypothetical protein SDJN03_17846, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023874233.11.43e-0737.27uncharacterized protein LOC111986789 [Quercus suber][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0026557.1IVF0026557.1mRNA