IVF0026532 (gene) Melon (IVF77) v1

Overview


Name	IVF0026532
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic
Location	chr04: 9929186 .. 9929547 (+)
RNA-Seq Expression	IVF0026532
Synteny	IVF0026532

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTCTGCTTTACGAATATGATATTTTCTGGGTATTTCTAATAATATCAAGTCTTATTCCTATTTTGGCATTTCTAATTTCTGAAGTTTTAGCCCCTCTTAGCAAAGAGCCAGAGAAACTTTTGAGTTATGAATCGGGAATAGAACCAATGGGCGATGCTTGGTACAATTTAGAATCCGTAATTATATGTTTGCTCTAGTTTTTGTTGTTTTTGATGTTGAAACAGTTTTTTTTTATCCGTGGGCAATGAGTTTTGATGTATTAGGGGTATCCGTCTTTATAGAAGCTTTAATTTTCGTGCTTATCCTAATTGTCGGTTTAGTTTATGCATGGCGAAAAGGAGCAATGGAATGGTCTTAG

mRNA sequence

ATGTTTCTGCTTTACGAATATGATATTTTCTGGGTATTTCTAATAATATCAAGTCTTATTCCTATTTTGGCATTTCTAATTTCTGAAGTTTTAGCCCCTCTTAGCAAAGAGCCAGAGAAACTTTTGATTTTTGTTGTTTTTGATGTTGAAACAGTTTTTTTTTATCCGTGGGCAATGAGTTTTGATGTATTAGGGGTATCCGTCTTTATAGAAGCTTTAATTTTCGTGCTTATCCTAATTGTCGGTTTAGTTTATGCATGGCGAAAAGGAGCAATGGAATGGTCTTAG

Coding sequence (CDS)

ATGTTTCTGCTTTACGAATATGATATTTTCTGGGTATTTCTAATAATATCAAGTCTTATTCCTATTTTGGCATTTCTAATTTCTGAAGTTTTAGCCCCTCTTAGCAAAGAGCCAGAGAAACTTTTGATTTTTGTTGTTTTTGATGTTGAAACAGTTTTTTTTTATCCGTGGGCAATGAGTTTTGATGTATTAGGGGTATCCGTCTTTATAGAAGCTTTAATTTTCGTGCTTATCCTAATTGTCGGTTTAGTTTATGCATGGCGAAAAGGAGCAATGGAATGGTCTTAG

Protein sequence

MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKLLIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGAMEWS

Homology

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BLAST of IVF0026532 vs. ExPASy Swiss-Prot
Match: Q4VZH0 (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhC PE=3 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 6.2e-37
Identity = 90/120 (75.00%), Postives = 93/120 (77.50%), Query Frame = 0


Query: 1   MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKL------------------- 60
           MFLLYEYDIFWVFLIISS+IPILAFLIS VLAPLSKEPEKL                   
Sbjct: 1   MFLLYEYDIFWVFLIISSVIPILAFLISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRI 60

Query: 61  ------LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGAMEWS 96
                 L+FVVFDVETVF YPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGA+EWS
Sbjct: 61  RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS 120

[Close]

BLAST of IVF0026532 vs. ExPASy Swiss-Prot
Match: P52765 (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Lupinus luteus OX=3873 GN=ndhC PE=3 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 1.2e-35
Identity = 87/120 (72.50%), Postives = 91/120 (75.83%), Query Frame = 0


Query: 1   MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKL------------------- 60
           MFLLYEYDIFW FLIISSLIPILAFLIS +LAP+SK PEKL                   
Sbjct: 1   MFLLYEYDIFWAFLIISSLIPILAFLISGILAPISKGPEKLSSYESGIEPMGDAWLQFRI 60

Query: 61  ------LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGAMEWS 96
                 L+FVVFDVETVF YPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGA+EWS
Sbjct: 61  RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS 120

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BLAST of IVF0026532 vs. ExPASy Swiss-Prot
Match: Q68S01 (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Panax ginseng OX=4054 GN=ndhC PE=3 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 2.6e-35
Identity = 87/120 (72.50%), Postives = 90/120 (75.00%), Query Frame = 0


Query: 1   MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKL------------------- 60
           MFLLYEYDIFW FLIISSLIPILAF IS VLAP+SK PEKL                   
Sbjct: 1   MFLLYEYDIFWAFLIISSLIPILAFFISGVLAPISKGPEKLSSYESGIEPMGNAWLQFRI 60

Query: 61  ------LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGAMEWS 96
                 L+FVVFDVETVF YPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGA+EWS
Sbjct: 61  RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS 120

[Close]

BLAST of IVF0026532 vs. ExPASy Swiss-Prot
Match: A0A340 (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Coffea arabica OX=13443 GN=ndhC PE=3 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 4.4e-35
Identity = 85/120 (70.83%), Postives = 90/120 (75.00%), Query Frame = 0


Query: 1   MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKL------------------- 60
           MFLLYEYDIFW FLIISSLIPILAF IS +LAP+SK PEKL                   
Sbjct: 1   MFLLYEYDIFWTFLIISSLIPILAFFISGILAPISKGPEKLSSYESGIEPIGDAWLQFRI 60

Query: 61  ------LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGAMEWS 96
                 L+FVVFDVETVF YPWAMSFD+LGVSVFIEALIFVLILIVGLVYAWRKGA+EWS
Sbjct: 61  RYYMFALVFVVFDVETVFLYPWAMSFDILGVSVFIEALIFVLILIVGLVYAWRKGALEWS 120

[Close]

BLAST of IVF0026532 vs. ExPASy Swiss-Prot
Match: Q49KZ3 (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Eucalyptus globulus subsp. globulus OX=71271 GN=ndhC PE=3 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 9.9e-35
Identity = 85/120 (70.83%), Postives = 90/120 (75.00%), Query Frame = 0


Query: 1   MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKL------------------- 60
           MFLLYEYDIFW FLIISS+IPILAF IS +LAP+SK PEKL                   
Sbjct: 1   MFLLYEYDIFWAFLIISSVIPILAFXISGILAPISKGPEKLSSYESGIEPMGDAWLQFRI 60

Query: 61  ------LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGAMEWS 96
                 L+FVVFDVETVF YPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGA+EWS
Sbjct: 61  RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS 120

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BLAST of IVF0026532 vs. ExPASy TrEMBL
Match: A0A249RZI2 (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Cucumis melo var. cantalupensis OX=3658 GN=ndhC PE=3 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 1.0e-34
Identity = 91/120 (75.83%), Postives = 93/120 (77.50%), Query Frame = 0


Query: 1   MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKL------------------- 60
           MFLLYEYDIFWVFLIISSLIPILAFLIS VLAPLSKEPEKL                   
Sbjct: 1   MFLLYEYDIFWVFLIISSLIPILAFLISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRI 60

Query: 61  ------LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGAMEWS 96
                 L+FVVFDVETVF YPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGA+EWS
Sbjct: 61  RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS 120

[Close]

BLAST of IVF0026532 vs. ExPASy TrEMBL
Match: A0A1S4EU16 (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Cucumis melo OX=3656 GN=ndhC PE=3 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 1.0e-34
Identity = 91/120 (75.83%), Postives = 93/120 (77.50%), Query Frame = 0


Query: 1   MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKL------------------- 60
           MFLLYEYDIFWVFLIISSLIPILAFLIS VLAPLSKEPEKL                   
Sbjct: 1   MFLLYEYDIFWVFLIISSLIPILAFLISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRI 60

Query: 61  ------LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGAMEWS 96
                 L+FVVFDVETVF YPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGA+EWS
Sbjct: 61  RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS 120

[Close]

BLAST of IVF0026532 vs. ExPASy TrEMBL
Match: A0A249RXR7 (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Cucumis melo subsp. agrestis OX=217619 GN=ndhC PE=3 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 1.0e-34
Identity = 91/120 (75.83%), Postives = 93/120 (77.50%), Query Frame = 0


Query: 1   MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKL------------------- 60
           MFLLYEYDIFWVFLIISSLIPILAFLIS VLAPLSKEPEKL                   
Sbjct: 1   MFLLYEYDIFWVFLIISSLIPILAFLISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRI 60

Query: 61  ------LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGAMEWS 96
                 L+FVVFDVETVF YPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGA+EWS
Sbjct: 61  RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS 120

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BLAST of IVF0026532 vs. ExPASy TrEMBL
Match: A0A286NG05 (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Cucumis melo var. flexuosus OX=1120798 GN=ndhC PE=3 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 1.0e-34
Identity = 91/120 (75.83%), Postives = 93/120 (77.50%), Query Frame = 0


Query: 1   MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKL------------------- 60
           MFLLYEYDIFWVFLIISSLIPILAFLIS VLAPLSKEPEKL                   
Sbjct: 1   MFLLYEYDIFWVFLIISSLIPILAFLISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRI 60

Query: 61  ------LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGAMEWS 96
                 L+FVVFDVETVF YPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGA+EWS
Sbjct: 61  RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS 120

[Close]

BLAST of IVF0026532 vs. ExPASy TrEMBL
Match: A0A249RZ15 (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Cucumis melo var. dudaim OX=2034236 GN=ndhC PE=3 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 1.0e-34
Identity = 91/120 (75.83%), Postives = 93/120 (77.50%), Query Frame = 0


Query: 1   MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKL------------------- 60
           MFLLYEYDIFWVFLIISSLIPILAFLIS VLAPLSKEPEKL                   
Sbjct: 1   MFLLYEYDIFWVFLIISSLIPILAFLISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRI 60

Query: 61  ------LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGAMEWS 96
                 L+FVVFDVETVF YPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGA+EWS
Sbjct: 61  RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS 120

[Close]

BLAST of IVF0026532 vs. NCBI nr
Match: YP_004841788.1 (NADH-plastoquinone oxidoreductase subunit 3 [Cucumis melo subsp. melo] >YP_009860078.1 NADH-plastoquinone oxidoreductase subunit 3 [Cucumis melo subsp. agrestis] >ASY96611.1 NADH dehydrogenase subunit 3 [Cucumis melo var. conomon] >ASY96698.1 NADH dehydrogenase subunit 3 [Cucumis melo var. makuwa] >ASY96785.1 NADH dehydrogenase subunit 3 [Cucumis melo var. momordica] >ASY96872.1 NADH dehydrogenase subunit 3 [Cucumis melo var. dudaim] >ASY96959.1 NADH dehydrogenase subunit 3 [Cucumis melo var. cantalupo] >ASY97133.1 NADH dehydrogenase subunit 3 [Cucumis melo var. inodorus] >ASY97307.1 NADH dehydrogenase subunit 3 [Cucumis melo var. flexuosus] >QJF46388.1 NADH dehydrogenase subunit 3 [Cucumis melo])

HSP 1 Score: 154 bits (389), Expect = 3.09e-46
Identity = 91/120 (75.83%), Postives = 93/120 (77.50%), Query Frame = 0


Query: 1   MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKL------------------- 60
           MFLLYEYDIFWVFLIISSLIPILAFLIS VLAPLSKEPEKL                   
Sbjct: 1   MFLLYEYDIFWVFLIISSLIPILAFLISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRI 60

Query: 61  ------LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGAMEWS 95
                 L+FVVFDVETVF YPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGA+EWS
Sbjct: 61  RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS 120

[Close]

BLAST of IVF0026532 vs. NCBI nr
Match: YP_009236285.1 (NADH-plastoquinone oxidoreductase subunit 3 [Gynostemma pentaphyllum] >YP_009430632.1 NADH dehydrogenase subunit 3 [Gynostemma cardiospermum] >YP_009439809.1 NADH dehydrogenase subunit 3 [Gynostemma laxiflorum] >YP_009439896.1 NADH dehydrogenase subunit 3 [Gynostemma caulopterum] >YP_009439983.1 NADH dehydrogenase subunit 3 [Gynostemma pentagynum] >YP_009440162.1 NADH dehydrogenase subunit 3 [Gynostemma longipes] >YP_009440249.1 NADH dehydrogenase subunit 3 [Gynostemma burmanicum (nom. inval.)] >YP_009440336.1 NADH dehydrogenase subunit 3 [Gynostemma pubescens] >YP_009468866.1 NADH dehydrogenase subunit 3 [Gynostemma compressum] >YP_009674396.1 NADH dehydrogenase subunit 3 [Siraitia grosvenorii] >YP_009738206.1 NADH dehydrogenase subunit 3 [Siraitia siamensis] >YP_009751827.1 NADH dehydrogenase subunit C [Indofevillea khasiana] >YP_009752840.1 NADH dehydrogenase subunit C [Baijiania yunnanensis] >YP_009753009.1 NADH dehydrogenase subunit C [Gerrardanthus macrorhizus] >YP_010015144.1 NADH dehydrogenase subunit 3 [Gynostemma yixingense] >AMF84030.1 NADH-plastoquinone oxidoreductase subunit 3 [Gynostemma pentaphyllum] >ANI25190.1 NADH dehydrogenase subunit 3 [Gynostemma pentaphyllum] >ART65013.1 NADH dehydrogenase subunit 3 [Gynostemma pentaphyllum] >ART65100.1 NADH dehydrogenase subunit 3 [Gynostemma cardiospermum] >ATG86680.1 NADH dehydrogenase subunit 3 [Gynostemma laxiflorum])

HSP 1 Score: 153 bits (386), Expect = 8.84e-46
Identity = 90/120 (75.00%), Postives = 93/120 (77.50%), Query Frame = 0


Query: 1   MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKL------------------- 60
           MFLLYEYDIFWVFLIISS+IPILAFLIS VLAPLSKEPEKL                   
Sbjct: 1   MFLLYEYDIFWVFLIISSVIPILAFLISGVLAPLSKEPEKLSSYESGIEPMGDAWLQFRI 60

Query: 61  ------LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGAMEWS 95
                 L+FVVFDVETVF YPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGA+EWS
Sbjct: 61  RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS 120

[Close]

BLAST of IVF0026532 vs. NCBI nr
Match: YP_009004049.1 (NADH-plastoquinone oxidoreductase subunit 3 [Cucumis hystrix] >YP_009317391.1 NADH dehydrogenase subunit 3 [Coccinia grandis] >YP_009325994.1 NADH dehydrogenase subunit 3 [Citrullus lanatus] >YP_009346489.1 NADH-plastoquinone oxidoreductase subunit 3 [Cucumis x hytivus] >YP_009348036.1 NADH dehydrogenase subunit 3 [Citrullus mucosospermus] >YP_009420799.1 NADH dehydrogenase subunit 3 [Citrullus colocynthis] >YP_009431562.1 NADH dehydrogenase subunit 3 [Citrullus amarus] >YP_009431647.1 NADH dehydrogenase subunit 3 [Citrullus rehmii] >YP_009456066.1 NADH dehydrogenase subunit 3 [Momordica charantia] >YP_009456151.1 NADH dehydrogenase subunit 3 [Lagenaria siceraria] >YP_009751911.1 NADH dehydrogenase subunit C [Cyclanthera pedata] >YP_009751995.1 NADH dehydrogenase subunit C [Cionosicys macranthus] >YP_009752080.1 NADH dehydrogenase subunit C [Dendrosicyos socotranus] >YP_009752248.1 NADH dehydrogenase subunit C [Trichosanthes baviensis] >YP_009752332.1 NADH dehydrogenase subunit C [Bryonia marmorata] >YP_009752417.1 NADH dehydrogenase subunit C [Trichosanthes tricuspidata] >YP_009752501.1 NADH dehydrogenase subunit C [Trichosanthes tubiflora] >YP_009752586.1 NADH dehydrogenase subunit C [Trichosanthes homophylla] >YP_009753094.1 NADH dehydrogenase subunit C [Corallocarpus boehmii] >YP_009753179.1 NADH dehydrogenase subunit C [Trichosanthes truncata] >YP_009753263.1 NADH dehydrogenase subunit C [Nothoalsomitra suberosa] >YP_009753625.1 NADH dehydrogenase subunit C [Trichosanthes wallichiana] >YP_009753710.1 NADH dehydrogenase subunit C [Trichosanthes nervifolia] >YP_009753794.1 NADH dehydrogenase subunit C [Trichosanthes pilosa] >YP_009753879.1 NADH dehydrogenase subunit C [Trichosanthes lobata] >YP_009945422.1 NADH-plastoquinone oxidoreductase subunit 3 [Sechium edule] >YP_247604.1 NADH dehydrogenase subunit 3 [Cucumis sativus] >Q4VZH0.1 RecName: Full=NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic; AltName: Full=NAD(P)H dehydrogenase subunit 3; AltName: Full=NADH-plastoquinone oxidoreductase subunit 3 [Cucumis sativus] >ALF03306.1 NADH dehydrogenase subunit 3 [Cucumis sativus var. hardwickii] >APW82466.1 NADH dehydrogenase subunit 3 [Citrullus lanatus subsp. vulgaris] >AVE15336.1 NdhC [Cucumis sativus var. sativus] >QIT04055.1 NADH dehydrogenase subunit C [Luffa aegyptiaca] >QIT05067.1 NADH dehydrogenase subunit C [Trichosanthes kirilowii] >QJD26476.1 NdhC [Trichosanthes kirilowii var. japonica] >QJD26650.1 NdhC [Trichosanthes rosthornii] >QKX48478.1 NADH-plastoquinone oxidoreductase subunit 3 [Luffa acutangula] >QNM38536.1 NADH-plastoquinone oxidoreductase subunit 3 [Lagenaria siceraria var. microcarpa] >QZL38598.1 NADH dehydrogenase subunit C [Citrullus naudinianus] >QZL38686.1 NADH dehydrogenase subunit C [Citrullus ecirrhosus])

HSP 1 Score: 153 bits (386), Expect = 8.84e-46
Identity = 90/120 (75.00%), Postives = 93/120 (77.50%), Query Frame = 0


Query: 1   MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKL------------------- 60
           MFLLYEYDIFWVFLIISS+IPILAFLIS VLAPLSKEPEKL                   
Sbjct: 1   MFLLYEYDIFWVFLIISSVIPILAFLISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRI 60

Query: 61  ------LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGAMEWS 95
                 L+FVVFDVETVF YPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGA+EWS
Sbjct: 61  RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS 120

[Close]

BLAST of IVF0026532 vs. NCBI nr
Match: YP_009447455.1 (NADH dehydrogenase subunit 3 [Cucurbita maxima] >YP_009447540.1 NADH dehydrogenase subunit 3 [Cucurbita moschata] >YP_009505085.1 NADH dehydrogenase subunit 3 [Cucurbita pepo] >ALO21719.1 NdhC [Cucurbita argyrosperma] >ALO21821.1 NdhC [Cucurbita argyrosperma var. palmeri] >ALO21844.1 NdhC [Cucurbita argyrosperma subsp. sororia] >ALO21931.1 NdhC [Cucurbita cordata] >ALO21996.1 NdhC [Cucurbita digitata] >ALO22029.1 NdhC [Cucurbita ecuadorensis] >ALO22102.1 NdhC [Cucurbita ficifolia] >ALO22216.1 NdhC [Cucurbita lundelliana] >ALO22339.1 NdhC [Cucurbita maxima subsp. andreana] >ALO22410.1 NdhC [Cucurbita okeechobeensis] >ALO22514.1 NdhC [Cucurbita okeechobeensis subsp. martinezii] >ALO22541.1 NdhC [Cucurbita pepo subsp. fraterna] >ALO22639.1 NdhC [Cucurbita pepo subsp. ovifera] >ALO22725.1 NdhC [Cucurbita pepo var. ozarkana] >ALO22763.1 NdhC [Cucurbita pepo subsp. pepo] >ALO22843.1 NdhC [Cucurbita pepo var. texana])

HSP 1 Score: 153 bits (386), Expect = 8.84e-46
Identity = 90/120 (75.00%), Postives = 93/120 (77.50%), Query Frame = 0


Query: 1   MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKL------------------- 60
           MFLLYEYDIFWVFLIISS+IPILAFLIS VLAPLSKEPEKL                   
Sbjct: 1   MFLLYEYDIFWVFLIISSVIPILAFLISGVLAPLSKEPEKLSSYESGIEPMGDAWVQFRI 60

Query: 61  ------LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGAMEWS 95
                 L+FVVFDVETVF YPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGA+EWS
Sbjct: 61  RYYIFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS 120

[Close]

BLAST of IVF0026532 vs. NCBI nr
Match: YP_009751658.1 (NADH dehydrogenase subunit C [Hodgsonia heteroclita] >QIT04391.1 NADH dehydrogenase subunit C [Hodgsonia heteroclita])

HSP 1 Score: 152 bits (385), Expect = 1.26e-45
Identity = 89/120 (74.17%), Postives = 93/120 (77.50%), Query Frame = 0


Query: 1   MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKL------------------- 60
           MFLLYEYDIFWVFLIISS+IPILAFLIS +LAPLSKEPEKL                   
Sbjct: 1   MFLLYEYDIFWVFLIISSVIPILAFLISGILAPLSKEPEKLSSYESGIEPMGDAWVQFRI 60

Query: 61  ------LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGAMEWS 95
                 L+FVVFDVETVF YPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGA+EWS
Sbjct: 61  RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGALEWS 120

[Close]

BLAST of IVF0026532 vs. TAIR 10
Match: ATCG00440.1 (NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein )

HSP 1 Score: 140.2 bits (352), Expect = 8.6e-34
Identity = 80/120 (66.67%), Postives = 87/120 (72.50%), Query Frame = 0


Query: 1   MFLLYEYDIFWVFLIISSLIPILAFLISEVLAPLSKEPEKL------------------- 60
           MFLLYEYDIFW FL+ISS IP+LAFLIS VL+P+ K PEKL                   
Sbjct: 1   MFLLYEYDIFWAFLLISSAIPVLAFLISGVLSPIRKGPEKLSSYESGIEPIGDAWLQFRI 60

Query: 61  ------LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGAMEWS 96
                 L+FVVFDVETVF YPWAMSFDVLGVS FIEA IFVLILI+GLVYAWRKGA+EWS
Sbjct: 61  RYYMFALVFVVFDVETVFLYPWAMSFDVLGVSAFIEAFIFVLILILGLVYAWRKGALEWS 120

[Close]

BLAST of IVF0026532 vs. TAIR 10
Match: AT2G07751.1 (NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein )

HSP 1 Score: 40.4 bits (93), Expect = 9.3e-04
Identity = 17/52 (32.69%), Postives = 34/52 (65.38%), Query Frame = 0


Query: 42  LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGAME 94
           ++F++ D+E  FF+PWA+  + + +  F   + F+ IL +G +Y W++GA +
Sbjct: 65  ILFLIPDLEVTFFFPWAVPPNKIDLFGFWSMMAFLFILTIGFLYEWKRGASD 116

[Close]

BLAST of IVF0026532 vs. TAIR 10
Match: ATMG00990.1 (NADH dehydrogenase 3 )

HSP 1 Score: 40.4 bits (93), Expect = 9.3e-04
Identity = 17/52 (32.69%), Postives = 34/52 (65.38%), Query Frame = 0


Query: 42  LIFVVFDVETVFFYPWAMSFDVLGVSVFIEALIFVLILIVGLVYAWRKGAME 94
           ++F++ D+E  FF+PWA+  + + +  F   + F+ IL +G +Y W++GA +
Sbjct: 66  ILFLIPDLEVTFFFPWAVPPNKIDLFGFWSMMAFLFILTIGFLYEWKRGASD 117

The following BLAST results are available for this feature:

BLAST of IVF0026532 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4VZH0	6.2e-37	75.00	NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Cucumis sativus OX=36...	[more]
P52765	1.2e-35	72.50	NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Lupinus luteus OX=387...	[more]
Q68S01	2.6e-35	72.50	NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Panax ginseng OX=4054...	[more]
A0A340	4.4e-35	70.83	NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Coffea arabica OX=134...	[more]
Q49KZ3	9.9e-35	70.83	NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Eucalyptus globulus s...	[more]

BLAST of IVF0026532 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A249RZI2	1.0e-34	75.83	NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Cucumis melo var. can...	[more]
A0A1S4EU16	1.0e-34	75.83	NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Cucumis melo OX=3656 ...	[more]
A0A249RXR7	1.0e-34	75.83	NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Cucumis melo subsp. a...	[more]
A0A286NG05	1.0e-34	75.83	NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Cucumis melo var. fle...	[more]
A0A249RZ15	1.0e-34	75.83	NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Cucumis melo var. dud...	[more]

BLAST of IVF0026532 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_004841788.1	3.09e-46	75.83	NADH-plastoquinone oxidoreductase subunit 3 [Cucumis melo subsp. melo] >YP_00986...	[more]
YP_009236285.1	8.84e-46	75.00	NADH-plastoquinone oxidoreductase subunit 3 [Gynostemma pentaphyllum] >YP_009430...	[more]
YP_009004049.1	8.84e-46	75.00	NADH-plastoquinone oxidoreductase subunit 3 [Cucumis hystrix] >YP_009317391.1 NA...	[more]
YP_009447455.1	8.84e-46	75.00	NADH dehydrogenase subunit 3 [Cucurbita maxima] >YP_009447540.1 NADH dehydrogena...	[more]
YP_009751658.1	1.26e-45	74.17	NADH dehydrogenase subunit C [Hodgsonia heteroclita] >QIT04391.1 NADH dehydrogen...	[more]

BLAST of IVF0026532 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00440.1	8.6e-34	66.67	NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein	[more]
AT2G07751.1	9.3e-04	32.69	NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein	[more]
ATMG00990.1	9.3e-04	32.69	NADH dehydrogenase 3	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038430	NADH:ubiquinone oxidoreductase, subunit 3 superfamily	GENE3D	1.20.58.1610	NADH:ubiquinone/plastoquinone oxidoreductase, chain 3	coord: 40..95 e-value: 8.2E-19 score: 69.7
IPR000440	NADH:ubiquinone/plastoquinone oxidoreductase, chain 3	PFAM	PF00507	Oxidored_q4	coord: 42..94 e-value: 2.7E-17 score: 62.8
IPR000440	NADH:ubiquinone/plastoquinone oxidoreductase, chain 3	PANTHER	PTHR11058	NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 3	coord: 1..42 coord: 42..95
None	No IPR available	PANTHER	PTHR11058:SF12	NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT 3, CHLOROPLASTIC	coord: 1..42 coord: 42..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0026532.2	IVF0026532.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006091	generation of precursor metabolites and energy
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0031967	organelle envelope
cellular_component	GO:0031090	organelle membrane
cellular_component	GO:0009579	thylakoid
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity