Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCGAAGGGAAGCAGGTCGTGTCCCCCAACGGAACTTTCCGTCGACTTTTCAGAGCTCGATGCCGGAAAAGTGCCAAAGCCAATTGTCTACTGGAAGCCATTGCCAAAGCAAGCAGAGAAGGAACTGGTTTTGTTTCTCATAGCGAAGAAAATGGAGTTGTACGGATAAAAATGGTGGTGAAGAAGACAGATTTAGCTCAAGTTCTCGAAGCTATGGGCGGCGGCGGCGGCGACGGAGGCGGAGGAGGAGGAGTTGCTGCGGCGTCGGTTTCCATTGAACAGCGGTTGGCGATTGTGAGGCGGAAGCAATTGCTCCGTGCGAAACTGGCGGCCGCGACTTGGAGTCCGGCGCTGCAAAGCATTCCTGAAGAGATCGATTCGTTCTGA
mRNA sequence
ATGATCGAAGGGAAGCAGGTCGTGTCCCCCAACGGAACTTTCCGTCGACTTTTCAGAGCTCGATGCCGGAAAAGTGCCAAAGCCAATTGTCTACTGGAAGCCATTGCCAAAGCAAGCAGAGAAGGAACTGGTTTTGTTTCTCATAGCGAAGAAAATGGAGTTGTACGGATAAAAATGGTGGTGAAGAAGACAGATTTAGCTCAAGTTCTCGAAGCTATGGGCGGCGGCGGCGGCGACGGAGGCGGAGGAGGAGGAGTTGCTGCGGCGTCGGTTTCCATTGAACAGCGGTTGGCGATTGTGAGGCGGAAGCAATTGCTCCGTGCGAAACTGGCGGCCGCGACTTGGAGTCCGGCGCTGCAAAGCATTCCTGAAGAGATCGATTCGTTCTGA
Coding sequence (CDS)
ATGATCGAAGGGAAGCAGGTCGTGTCCCCCAACGGAACTTTCCGTCGACTTTTCAGAGCTCGATGCCGGAAAAGTGCCAAAGCCAATTGTCTACTGGAAGCCATTGCCAAAGCAAGCAGAGAAGGAACTGGTTTTGTTTCTCATAGCGAAGAAAATGGAGTTGTACGGATAAAAATGGTGGTGAAGAAGACAGATTTAGCTCAAGTTCTCGAAGCTATGGGCGGCGGCGGCGGCGACGGAGGCGGAGGAGGAGGAGTTGCTGCGGCGTCGGTTTCCATTGAACAGCGGTTGGCGATTGTGAGGCGGAAGCAATTGCTCCGTGCGAAACTGGCGGCCGCGACTTGGAGTCCGGCGCTGCAAAGCATTCCTGAAGAGATCGATTCGTTCTGA
Protein sequence
MIEGKQVVSPNGTFRRLFRARCRKSAKANCLLEAIAKASREGTGFVSHSEENGVVRIKMVVKKTDLAQVLEAMGGGGGDGGGGGGVAAASVSIEQRLAIVRRKQLLRAKLAAATWSPALQSIPEEIDSF
Homology
BLAST of IVF0026456 vs. ExPASy TrEMBL
Match:
A0A5A7SHL7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3037G00200 PE=4 SV=1)
HSP 1 Score: 245.0 bits (624), Expect = 1.8e-61
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0
Query: 1 MIEGKQVVSPNGTFRRLFRARCRKSAKANCLLEAIAKASREGTGFVSHSEENGVVRIKMV 60
MIEGKQVVSPNGTFRRLFRARCRKSAKANCLLEAIAKASREGTGFVSHSEENGVVRIKMV
Sbjct: 1 MIEGKQVVSPNGTFRRLFRARCRKSAKANCLLEAIAKASREGTGFVSHSEENGVVRIKMV 60
Query: 61 VKKTDLAQVLEAMGGGGGDGGGGGGVAAASVSIEQRLAIVRRKQLLRAKLAAATWSPALQ 120
VKKTDLAQVLEAMGGGGGDGGGGGGVAAASVSIEQRLAIVRRKQLLRAKLAAATWSPALQ
Sbjct: 61 VKKTDLAQVLEAMGGGGGDGGGGGGVAAASVSIEQRLAIVRRKQLLRAKLAAATWSPALQ 120
Query: 121 SIPEEIDSF 130
SIPEEIDSF
Sbjct: 121 SIPEEIDSF 129
BLAST of IVF0026456 vs. ExPASy TrEMBL
Match:
A0A0A0K2L8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G014600 PE=4 SV=1)
HSP 1 Score: 208.4 bits (529), Expect = 1.8e-50
Identity = 113/129 (87.60%), Postives = 116/129 (89.92%), Query Frame = 0
Query: 1 MIEGKQVVSPNGTFRRLFRARCRKSAKANCLLEAIAKASREGTGFVSHSEENGVVRIKMV 60
MIEGKQV SPNGTFRRLFRARCRKSAKAN LLEAIAKASREG GFVSHSEENGVVRIKMV
Sbjct: 1 MIEGKQVASPNGTFRRLFRARCRKSAKANGLLEAIAKASREGAGFVSHSEENGVVRIKMV 60
Query: 61 VKKTDLAQVLEAMGGGGGDGGGGGGVAAASVSIEQRLAIVRRKQLLRAKLAAATWSPALQ 120
VKKTDL QVLEAMGGG GGGG VA ASVS+E RL ++RRKQ LRAKLAAATWSPALQ
Sbjct: 61 VKKTDLVQVLEAMGGG---DGGGGVVAPASVSMEHRLTVLRRKQFLRAKLAAATWSPALQ 120
Query: 121 SIPEEIDSF 130
SIPEEIDSF
Sbjct: 121 SIPEEIDSF 126
BLAST of IVF0026456 vs. ExPASy TrEMBL
Match:
A0A6J5VPM4 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS51099 PE=4 SV=1)
HSP 1 Score: 88.6 bits (218), Expect = 2.1e-14
Identity = 62/127 (48.82%), Postives = 84/127 (66.14%), Query Frame = 0
Query: 15 RRLFR-ARCRKSAK-----ANCLLEAIAKAS---REGTGFVSH-SEENGVVRIKMVVKKT 74
R LFR R R + K +N L+EAIAK + +EGT +SH ++E+GVVR+K++V++
Sbjct: 6 RVLFRHGRARMNQKSNLITSNALMEAIAKVNGDHQEGTNVLSHQTQEDGVVRMKILVRRQ 65
Query: 75 DLAQVLEAMGGGGGDGGGGGGVAAASVSIEQRLAIVRRKQLLRAKLAA-----ATWSPAL 127
DL QVLE M GGG V +S+ +EQRL+++R+K LLRA LAA +W PAL
Sbjct: 66 DLKQVLELM-NGGGINNQASAVRPSSLCVEQRLSLLRKKHLLRASLAAKHSRQGSWCPAL 125
BLAST of IVF0026456 vs. ExPASy TrEMBL
Match:
A0A314YA00 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_10648 PE=4 SV=1)
HSP 1 Score: 85.5 bits (210), Expect = 1.8e-13
Identity = 61/127 (48.03%), Postives = 84/127 (66.14%), Query Frame = 0
Query: 15 RRLFR-ARCRKSAK-----ANCLLEAIAKAS---REGTGFVSH-SEENGVVRIKMVVKKT 74
R LFR R R + K +N L+EAIAK + +EGT +SH ++E+GVVR+K++V++
Sbjct: 6 RVLFRHGRARMNQKSNLITSNALMEAIAKVNGDHQEGTNVLSHQTQEDGVVRMKILVRRQ 65
Query: 75 DLAQVLEAMGGGGGDGGGGGGVAAASVSIEQRLAIVRRKQLLRAKLAA-----ATWSPAL 127
DL QVLE M GG V +S+ +EQRL+++R+K LLRA LAA ++W PAL
Sbjct: 66 DLKQVLELM--NGGINSQASVVRPSSLCVEQRLSLLRKKHLLRASLAAKHSRQSSWRPAL 125
BLAST of IVF0026456 vs. ExPASy TrEMBL
Match:
B9H1L6 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_004G178500 PE=4 SV=1)
HSP 1 Score: 85.1 bits (209), Expect = 2.3e-13
Identity = 58/126 (46.03%), Postives = 77/126 (61.11%), Query Frame = 0
Query: 3 EGKQVVSPNGTFRRLFRARCRKSAKANCLLEAIAKASREGTGFVSHSEENGVVRIKMVVK 62
EGK SP FR L R R +S K+N L E+I + + G VSH+ ENG VR+K+VV+
Sbjct: 9 EGK--ASPKRDFRALLRGRNHRSLKSN-LPESIGQVN--GGCVVSHTNENGFVRMKLVVR 68
Query: 63 KTDLAQVLEAMGGGGGDGGGGGGVAAASVSIEQRLAIVRRKQLLRAKLAAA----TWSPA 122
K DL Q+LE M GG + +S+S+EQRL ++RRK L R+ A +W+PA
Sbjct: 69 KQDLKQMLEVMRGGKSNANQASYSPVSSLSLEQRLNLLRRKHLSRSNSAKGSCRRSWTPA 128
Query: 123 LQSIPE 125
LQSIPE
Sbjct: 129 LQSIPE 129
BLAST of IVF0026456 vs. NCBI nr
Match:
KAA0025124.1 (hypothetical protein E6C27_scaffold124G00220 [Cucumis melo var. makuwa] >TYK19366.1 hypothetical protein E5676_scaffold3037G00200 [Cucumis melo var. makuwa])
HSP 1 Score: 243 bits (621), Expect = 7.06e-81
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0
Query: 1 MIEGKQVVSPNGTFRRLFRARCRKSAKANCLLEAIAKASREGTGFVSHSEENGVVRIKMV 60
MIEGKQVVSPNGTFRRLFRARCRKSAKANCLLEAIAKASREGTGFVSHSEENGVVRIKMV
Sbjct: 1 MIEGKQVVSPNGTFRRLFRARCRKSAKANCLLEAIAKASREGTGFVSHSEENGVVRIKMV 60
Query: 61 VKKTDLAQVLEAMGGGGGDGGGGGGVAAASVSIEQRLAIVRRKQLLRAKLAAATWSPALQ 120
VKKTDLAQVLEAMGGGGGDGGGGGGVAAASVSIEQRLAIVRRKQLLRAKLAAATWSPALQ
Sbjct: 61 VKKTDLAQVLEAMGGGGGDGGGGGGVAAASVSIEQRLAIVRRKQLLRAKLAAATWSPALQ 120
Query: 121 SIPEEIDSF 129
SIPEEIDSF
Sbjct: 121 SIPEEIDSF 129
BLAST of IVF0026456 vs. NCBI nr
Match:
KGN43274.1 (hypothetical protein Csa_020212 [Cucumis sativus])
HSP 1 Score: 207 bits (526), Expect = 1.96e-66
Identity = 113/129 (87.60%), Postives = 116/129 (89.92%), Query Frame = 0
Query: 1 MIEGKQVVSPNGTFRRLFRARCRKSAKANCLLEAIAKASREGTGFVSHSEENGVVRIKMV 60
MIEGKQV SPNGTFRRLFRARCRKSAKAN LLEAIAKASREG GFVSHSEENGVVRIKMV
Sbjct: 1 MIEGKQVASPNGTFRRLFRARCRKSAKANGLLEAIAKASREGAGFVSHSEENGVVRIKMV 60
Query: 61 VKKTDLAQVLEAMGGGGGDGGGGGGVAAASVSIEQRLAIVRRKQLLRAKLAAATWSPALQ 120
VKKTDL QVLEAMGGG G GGG VA ASVS+E RL ++RRKQ LRAKLAAATWSPALQ
Sbjct: 61 VKKTDLVQVLEAMGGGDG---GGGVVAPASVSMEHRLTVLRRKQFLRAKLAAATWSPALQ 120
Query: 121 SIPEEIDSF 129
SIPEEIDSF
Sbjct: 121 SIPEEIDSF 126
BLAST of IVF0026456 vs. NCBI nr
Match:
XP_023511743.1 (uncharacterized protein LOC111776510 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 197 bits (500), Expect = 1.74e-62
Identity = 108/129 (83.72%), Postives = 115/129 (89.15%), Query Frame = 0
Query: 1 MIEGKQVVSPNGTFRRLFRARCRKSAKANCLLEAIAKASREGTGFVSHSEENGVVRIKMV 60
MI+GKQ SPNG FRRLFRAR RK+AKA+ LLEAIAK SREGTGFVS +EE+GVVRIKMV
Sbjct: 1 MIDGKQTASPNGAFRRLFRARGRKNAKASNLLEAIAKVSREGTGFVSQNEEDGVVRIKMV 60
Query: 61 VKKTDLAQVLEAMGGGGGDGGGGGGVAAASVSIEQRLAIVRRKQLLRAKLAAATWSPALQ 120
VKKTDLAQVLEAM GGGG GGGVA ASVS+EQRLAI+RRKQ LRAKLAAATWSPALQ
Sbjct: 61 VKKTDLAQVLEAMAGGGG----GGGVAPASVSVEQRLAIMRRKQFLRAKLAAATWSPALQ 120
Query: 121 SIPEEIDSF 129
SIPEEIDSF
Sbjct: 121 SIPEEIDSF 125
BLAST of IVF0026456 vs. NCBI nr
Match:
KAG6572129.1 (hypothetical protein SDJN03_28857, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 184 bits (467), Expect = 1.98e-57
Identity = 101/124 (81.45%), Postives = 109/124 (87.90%), Query Frame = 0
Query: 1 MIEGKQVVSPNGTFRRLFRARCRKSAKANCLLEAIAKASREGTGFVSHSEENGVVRIKMV 60
MI+GKQ SPNG FRRLFRAR RK+AKA+ LLEAIAK SREGTGFVS +EE+GVVRIKMV
Sbjct: 1 MIDGKQTASPNGAFRRLFRARGRKNAKASNLLEAIAKVSREGTGFVSQNEEDGVVRIKMV 60
Query: 61 VKKTDLAQVLEAMGGGGGDGGGGGGVAAASVSIEQRLAIVRRKQLLRAKLAAATWSPALQ 120
VKKTDLAQVLEA+ GGGG GGGVA ASVS+E RLAI+RRKQ LRAKLAAATWSPALQ
Sbjct: 61 VKKTDLAQVLEALAGGGG----GGGVAPASVSVEHRLAIMRRKQFLRAKLAAATWSPALQ 120
Query: 121 SIPE 124
SIPE
Sbjct: 121 SIPE 120
BLAST of IVF0026456 vs. NCBI nr
Match:
CAB4290916.1 (unnamed protein product [Prunus armeniaca] >CAB4321236.1 unnamed protein product [Prunus armeniaca])
HSP 1 Score: 88.6 bits (218), Expect = 1.44e-19
Identity = 62/127 (48.82%), Postives = 85/127 (66.93%), Query Frame = 0
Query: 15 RRLFR-ARCRKSAKAN-----CLLEAIAKAS---REGTGFVSH-SEENGVVRIKMVVKKT 74
R LFR R R + K+N L+EAIAK + +EGT +SH ++E+GVVR+K++V++
Sbjct: 6 RVLFRHGRARMNQKSNLITSNALMEAIAKVNGDHQEGTNVLSHQTQEDGVVRMKILVRRQ 65
Query: 75 DLAQVLEAMGGGGGDGGGGGGVAAASVSIEQRLAIVRRKQLLRAKLAA-----ATWSPAL 126
DL QVLE M GGG + V +S+ +EQRL+++R+K LLRA LAA +W PAL
Sbjct: 66 DLKQVLELMNGGGINNQAS-AVRPSSLCVEQRLSLLRKKHLLRASLAAKHSRQGSWCPAL 125
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7SHL7 | 1.8e-61 | 100.00 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A0A0K2L8 | 1.8e-50 | 87.60 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G014600 PE=4 SV=1 | [more] |
A0A6J5VPM4 | 2.1e-14 | 48.82 | Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS51099 PE=4 S... | [more] |
A0A314YA00 | 1.8e-13 | 48.03 | Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_106... | [more] |
B9H1L6 | 2.3e-13 | 46.03 | Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_004G178500 PE=4 ... | [more] |
Match Name | E-value | Identity | Description | |
KAA0025124.1 | 7.06e-81 | 100.00 | hypothetical protein E6C27_scaffold124G00220 [Cucumis melo var. makuwa] >TYK1936... | [more] |
KGN43274.1 | 1.96e-66 | 87.60 | hypothetical protein Csa_020212 [Cucumis sativus] | [more] |
XP_023511743.1 | 1.74e-62 | 83.72 | uncharacterized protein LOC111776510 [Cucurbita pepo subsp. pepo] | [more] |
KAG6572129.1 | 1.98e-57 | 81.45 | hypothetical protein SDJN03_28857, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
CAB4290916.1 | 1.44e-19 | 48.82 | unnamed protein product [Prunus armeniaca] >CAB4321236.1 unnamed protein product... | [more] |
Match Name | E-value | Identity | Description | |