Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACTCTGATGACCTAGATAATATTCCACTGGCCAGACTGTTGAAGAAGAATTATGTTCCTAATGTTGCAATTGAAAAATCTACTGATCCTATTTTATCAGTTCATTCTCAGGGAAGCTCGTCCTCTGAAGATGTGTTTGTTCCTACTTCCCTTCATCATGCTTCAAATGTAGAACCTGGCCCTTCGCATCACTCTGTACCTATTAGGTCATTGGTCCAGACAATGTTACCACTTCTAATCTGAATGTTGAACCTACACTTGCTCCTGCTGATGAATCTATTGTGACTGAAGGAAGATCTGTTGAAACCCTTGCTAATGATGAAGACAATGGTGAACCTGTCAACACTGACGTCCATGATGATGAGATCCTAGTAAATGAAAGTGTTGAACCAGATGTTCGTAATGATCCTCAACCTGAGAATCAACCAGTTGCAGACGTATCCAGGCCAACAAGGAAGAAATTTCAGCAGAACCGGTGCAACATTACAACCAAGACTAGAAGAAAGAAGATCTCTCCTAAAATTCCATCTGTTCCAATTGATGGAATATCTTTTCATCTCGAAGAAAATGTTCAGCGTTGGAAATTTGTTGTGCAGTAA
mRNA sequence
ATGGACTCTGATGACCTAGATAATATTCCACTGGCCAGACTGTTGAAGAAGAATTATGTTCCTAATGTTGCAATTGAAAAATCTACTGATCCTATTTTATCAGTTCATTCTCAGGGAAGCTCGTCCTCTGAAGATGTGTTTGTTCCTACTTCCCTTCATCATGCTTCAAATGTAGAACCTGGCCCTTCGCATCACTCTGTACCTATTAGGTCATTGGTCCAGACAATATCTGTTGAAACCCTTGCTAATGATGAAGACAATGGTGAACCTGTCAACACTGACGTCCATGATGATGAGATCCTAGTAAATGAAAGTGTTGAACCAGATGTTCGTAATGATCCTCAACCTGAGAATCAACCAGTTGCAGACGTATCCAGGCCAACAAGGAAGAAATTTCAGCAGAACCGGTGCAACATTACAACCAAGACTAGAAGAAAGAAGATCTCTCCTAAAATTCCATCTGTTCCAATTGATGGAATATCTTTTCATCTCGAAGAAAATGTTCAGCGTTGGAAATTTGTTGTGCAGTAA
Coding sequence (CDS)
ATGGACTCTGATGACCTAGATAATATTCCACTGGCCAGACTGTTGAAGAAGAATTATGTTCCTAATGTTGCAATTGAAAAATCTACTGATCCTATTTTATCAGTTCATTCTCAGGGAAGCTCGTCCTCTGAAGATGTGTTTGTTCCTACTTCCCTTCATCATGCTTCAAATGTAGAACCTGGCCCTTCGCATCACTCTGTACCTATTAGGTCATTGGTCCAGACAATATCTGTTGAAACCCTTGCTAATGATGAAGACAATGGTGAACCTGTCAACACTGACGTCCATGATGATGAGATCCTAGTAAATGAAAGTGTTGAACCAGATGTTCGTAATGATCCTCAACCTGAGAATCAACCAGTTGCAGACGTATCCAGGCCAACAAGGAAGAAATTTCAGCAGAACCGGTGCAACATTACAACCAAGACTAGAAGAAAGAAGATCTCTCCTAAAATTCCATCTGTTCCAATTGATGGAATATCTTTTCATCTCGAAGAAAATGTTCAGCGTTGGAAATTTGTTGTGCAGTAA
Protein sequence
MDSDDLDNIPLARLLKKNYVPNVAIEKSTDPILSVHSQGSSSSEDVFVPTSLHHASNVEPGPSHHSVPIRSLVQTISVETLANDEDNGEPVNTDVHDDEILVNESVEPDVRNDPQPENQPVADVSRPTRKKFQQNRCNITTKTRRKKISPKIPSVPIDGISFHLEENVQRWKFVVQ
Homology
BLAST of IVF0026405 vs. ExPASy TrEMBL
Match:
A0A5A7TZT0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G001140 PE=4 SV=1)
HSP 1 Score: 285.0 bits (728), Expect = 2.1e-73
Identity = 153/179 (85.47%), Postives = 161/179 (89.94%), Query Frame = 0
Query: 1 MDSDDLDNIPLARLLKKNYVPNVAIEKSTDPILSVHSQGSSSSEDVFVPTSLHHAS-NVE 60
MDSDDLDNIPLARLLKKNYVPNVAIEKSTDPILSVHSQGSSSSEDV P ++ ++ NVE
Sbjct: 69 MDSDDLDNIPLARLLKKNYVPNVAIEKSTDPILSVHSQGSSSSEDVIGPDNVTTSNLNVE 128
Query: 61 P--GPSHHSVPIRSLVQTISVETLANDEDNGEPVNTDVHDDEILVNESVEPDVRNDPQPE 120
P P+ S+ + + SVETLANDEDNGEPVNTDVHDDEILVNESVEPDVRNDPQPE
Sbjct: 129 PTLAPADESI----VTEGRSVETLANDEDNGEPVNTDVHDDEILVNESVEPDVRNDPQPE 188
Query: 121 NQPVADVSRPTRKKFQQNRCNITTKTRRKKISPKIPSVPIDGISFHLEENVQRWKFVVQ 177
NQPVADVSRPTRKKFQQNRCNITTKTRRKKISPKIPSVPIDGISFHLEENVQRWKFVVQ
Sbjct: 189 NQPVADVSRPTRKKFQQNRCNITTKTRRKKISPKIPSVPIDGISFHLEENVQRWKFVVQ 243
BLAST of IVF0026405 vs. ExPASy TrEMBL
Match:
A0A5A7T1S8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold549G00300 PE=4 SV=1)
HSP 1 Score: 189.5 bits (480), Expect = 1.2e-44
Identity = 112/172 (65.12%), Postives = 126/172 (73.26%), Query Frame = 0
Query: 1 MDSDDLDNIPLARLLKKNYVPNVAIEKSTDPILSVHSQGSSSSEDVFVPT-SLH---HAS 60
+DSD+LDN+PLARL+KK+ VP+VA+EKS DP++SVHSQ SSSSE VFV T LH HAS
Sbjct: 66 IDSDELDNVPLARLIKKSSVPDVAVEKSNDPVVSVHSQESSSSEGVFVLTLGLHFQVHAS 125
Query: 61 NVEPGPSHHSVPIRSLVQTISVETLANDEDNGEPVNTDVHDDEILVNESVEPDVRNDPQP 120
NVEP PSHHS P+ + V E ANDED EPVN VH DEI V ++ + ND QP
Sbjct: 126 NVEPYPSHHSPPVGTDVP--DDEFPANDEDVIEPVNIGVHTDEIPVGDNDDSYAHNDSQP 185
Query: 121 ENQPVADVSRPTRKKFQQNRCNITTKTRRKKISPKIPSVPIDGISFHLEENV 169
E QPV D SR RKKFQQN NITTKT RKKI P I VPIDGISFHLEENV
Sbjct: 186 ETQPVPDESRSARKKFQQNWRNITTKTERKKILPNISFVPIDGISFHLEENV 235
BLAST of IVF0026405 vs. ExPASy TrEMBL
Match:
A0A5A7T560 (Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00460 PE=4 SV=1)
HSP 1 Score: 188.7 bits (478), Expect = 2.0e-44
Identity = 106/174 (60.92%), Postives = 122/174 (70.11%), Query Frame = 0
Query: 1 MDSDDLDNIPLARLLKKNYVPNVAIEKSTDPILSVHSQGSSSSEDVFVPT-SLH---HAS 60
+DSDDLDN+PL L+ KN VP+VA+EK TDPI+SVHSQ SSSE VFVP LH H S
Sbjct: 30 IDSDDLDNVPLVNLINKNSVPDVAVEKFTDPIISVHSQKCSSSEGVFVPNLGLHFQAHTS 89
Query: 61 NVEPGPSHHSVPIRSLVQTISVETLANDEDNGEPVNTDVHDDEILVNESVEPDVRNDPQP 120
NVEPGP HHS P+ E ND+D + VN +H +EI V ++ +PD ND Q
Sbjct: 90 NVEPGPLHHSPPV-GKPDVPDDEIPTNDKDVVKLVNIGIHTNEIPVGDNDDPDAHNDSQS 149
Query: 121 ENQPVADVSRPTRKKFQQNRCNITTKTRRKKISPKIPSVPIDGISFHLEENVQR 171
E QP + RP RKKFQQNRCN+TTKTRRKKI I SVPIDGISFHLEENVQR
Sbjct: 150 ETQPFVEEFRPARKKFQQNRCNMTTKTRRKKIPHNISSVPIDGISFHLEENVQR 202
BLAST of IVF0026405 vs. ExPASy TrEMBL
Match:
A0A5D3BN17 (Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2044G00470 PE=4 SV=1)
HSP 1 Score: 187.2 bits (474), Expect = 5.9e-44
Identity = 112/198 (56.57%), Postives = 131/198 (66.16%), Query Frame = 0
Query: 1 MDSDDLDNIPLARLLKKNYVPNVAIEKSTDPILSVHSQGSSSSEDVFVPTS-LHHASNVE 60
MDSDDLDN+ L +LLKKN+VP+V EKS +P +SVHSQ SSS+E VFVPTS LHH SNVE
Sbjct: 48 MDSDDLDNVLLTKLLKKNFVPDVVAEKSINPSISVHSQESSSTEGVFVPTSGLHHTSNVE 107
Query: 61 PGPSHHSVPIRSLVQTISV--------------ETLA-------NDEDNGEPVNTDVHDD 120
P PS +S +RS + + E++A NDED EPVNT VH
Sbjct: 108 PDPSLYSSLVRSSIPDNTTTSGPHIDSASAPADESIATGRIDVQNDEDEVEPVNTGVHTS 167
Query: 121 EILVNESVEPDVRNDPQPENQPVADVSRPTRKKFQQNRCNITTKTRRKKISPKIPSVPID 177
EI V ++ +PD QPE + SR +KKF+QNR NITTK RK I P IPSVPID
Sbjct: 168 EISVGDNSDPDA----QPETHTFPEESRLAKKKFRQNRQNITTKIGRKNIPPNIPSVPID 227
BLAST of IVF0026405 vs. ExPASy TrEMBL
Match:
A0A5A7SM94 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold506G00110 PE=4 SV=1)
HSP 1 Score: 181.4 bits (459), Expect = 3.2e-42
Identity = 107/176 (60.80%), Postives = 123/176 (69.89%), Query Frame = 0
Query: 1 MDSDDLDNIPLARLLKKNYVPNVAIEKSTDPILSVHSQGSSSSEDVFVPT-SLHHASNVE 60
MDSD+ ++PLARLLKK +V NVA KS +PI+S SQ SSSSEDVF+PT L+HAS+ E
Sbjct: 160 MDSDEQYDVPLARLLKKGFVLNVASTKSVNPIISARSQESSSSEDVFIPTPGLYHASDQE 219
Query: 61 PGPSHHSVPIRSLVQTISVETLANDEDNGEPVNTDVHDDEILVNESVEPDVRNDPQPENQ 120
P PS HS PIR+ V T+ D++N +P NTD VEPDV +D Q E Q
Sbjct: 220 PSPSQHSPPIRNDVPTVETPI---DDENVDPTNTD-------ATNIVEPDVYDDFQLETQ 279
Query: 121 PVADVSRPTRKKFQQNRCNITTKTRRKKISPKIPSVPIDGISFHLEENVQRWKFVV 176
VSRP KKFQQNR NITTKT RKKI IPSVPIDGISFHLEENVQRWK+VV
Sbjct: 280 QSPGVSRPKGKKFQQNRRNITTKTGRKKIPLNIPSVPIDGISFHLEENVQRWKYVV 325
BLAST of IVF0026405 vs. NCBI nr
Match:
KAA0046861.1 (uncharacterized protein E6C27_scaffold230G00140 [Cucumis melo var. makuwa] >TYK03285.1 uncharacterized protein E5676_scaffold298G001140 [Cucumis melo var. makuwa])
HSP 1 Score: 278 bits (712), Expect = 3.04e-92
Identity = 153/179 (85.47%), Postives = 161/179 (89.94%), Query Frame = 0
Query: 1 MDSDDLDNIPLARLLKKNYVPNVAIEKSTDPILSVHSQGSSSSEDVFVPTSLHHAS-NVE 60
MDSDDLDNIPLARLLKKNYVPNVAIEKSTDPILSVHSQGSSSSEDV P ++ ++ NVE
Sbjct: 69 MDSDDLDNIPLARLLKKNYVPNVAIEKSTDPILSVHSQGSSSSEDVIGPDNVTTSNLNVE 128
Query: 61 P--GPSHHSVPIRSLVQTISVETLANDEDNGEPVNTDVHDDEILVNESVEPDVRNDPQPE 120
P P+ S+ + + SVETLANDEDNGEPVNTDVHDDEILVNESVEPDVRNDPQPE
Sbjct: 129 PTLAPADESI----VTEGRSVETLANDEDNGEPVNTDVHDDEILVNESVEPDVRNDPQPE 188
Query: 121 NQPVADVSRPTRKKFQQNRCNITTKTRRKKISPKIPSVPIDGISFHLEENVQRWKFVVQ 176
NQPVADVSRPTRKKFQQNRCNITTKTRRKKISPKIPSVPIDGISFHLEENVQRWKFVVQ
Sbjct: 189 NQPVADVSRPTRKKFQQNRCNITTKTRRKKISPKIPSVPIDGISFHLEENVQRWKFVVQ 243
BLAST of IVF0026405 vs. NCBI nr
Match:
KAA0036893.1 (uncharacterized protein E6C27_scaffold1480G00140 [Cucumis melo var. makuwa] >TYJ96679.1 uncharacterized protein E5676_scaffold549G00300 [Cucumis melo var. makuwa])
HSP 1 Score: 183 bits (464), Expect = 1.04e-54
Identity = 112/172 (65.12%), Postives = 126/172 (73.26%), Query Frame = 0
Query: 1 MDSDDLDNIPLARLLKKNYVPNVAIEKSTDPILSVHSQGSSSSEDVFVPT-SLH---HAS 60
+DSD+LDN+PLARL+KK+ VP+VA+EKS DP++SVHSQ SSSSE VFV T LH HAS
Sbjct: 66 IDSDELDNVPLARLIKKSSVPDVAVEKSNDPVVSVHSQESSSSEGVFVLTLGLHFQVHAS 125
Query: 61 NVEPGPSHHSVPIRSLVQTISVETLANDEDNGEPVNTDVHDDEILVNESVEPDVRNDPQP 120
NVEP PSHHS P+ + V E ANDED EPVN VH DEI V ++ + ND QP
Sbjct: 126 NVEPYPSHHSPPVGTDVP--DDEFPANDEDVIEPVNIGVHTDEIPVGDNDDSYAHNDSQP 185
Query: 121 ENQPVADVSRPTRKKFQQNRCNITTKTRRKKISPKIPSVPIDGISFHLEENV 168
E QPV D SR RKKFQQN NITTKT RKKI P I VPIDGISFHLEENV
Sbjct: 186 ETQPVPDESRSARKKFQQNWRNITTKTERKKILPNISFVPIDGISFHLEENV 235
BLAST of IVF0026405 vs. NCBI nr
Match:
TYK01201.1 (envelope-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 181 bits (459), Expect = 2.28e-53
Identity = 112/198 (56.57%), Postives = 131/198 (66.16%), Query Frame = 0
Query: 1 MDSDDLDNIPLARLLKKNYVPNVAIEKSTDPILSVHSQGSSSSEDVFVPTS-LHHASNVE 60
MDSDDLDN+ L +LLKKN+VP+V EKS +P +SVHSQ SSS+E VFVPTS LHH SNVE
Sbjct: 48 MDSDDLDNVLLTKLLKKNFVPDVVAEKSINPSISVHSQESSSTEGVFVPTSGLHHTSNVE 107
Query: 61 PGPSHHSVPIRSLVQTISV--------------ETLA-------NDEDNGEPVNTDVHDD 120
P PS +S +RS + + E++A NDED EPVNT VH
Sbjct: 108 PDPSLYSSLVRSSIPDNTTTSGPHIDSASAPADESIATGRIDVQNDEDEVEPVNTGVHTS 167
Query: 121 EILVNESVEPDVRNDPQPENQPVADVSRPTRKKFQQNRCNITTKTRRKKISPKIPSVPID 176
EI V ++ +PD QPE + SR +KKF+QNR NITTK RK I P IPSVPID
Sbjct: 168 EISVGDNSDPDA----QPETHTFPEESRLAKKKFRQNRQNITTKIGRKNIPPNIPSVPID 227
BLAST of IVF0026405 vs. NCBI nr
Match:
KAA0038133.1 (envelope-like protein [Cucumis melo var. makuwa] >TYK20474.1 envelope-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 182 bits (463), Expect = 3.69e-53
Identity = 106/174 (60.92%), Postives = 122/174 (70.11%), Query Frame = 0
Query: 1 MDSDDLDNIPLARLLKKNYVPNVAIEKSTDPILSVHSQGSSSSEDVFVPT-SLH---HAS 60
+DSDDLDN+PL L+ KN VP+VA+EK TDPI+SVHSQ SSSE VFVP LH H S
Sbjct: 30 IDSDDLDNVPLVNLINKNSVPDVAVEKFTDPIISVHSQKCSSSEGVFVPNLGLHFQAHTS 89
Query: 61 NVEPGPSHHSVPIRSLVQTISVETLANDEDNGEPVNTDVHDDEILVNESVEPDVRNDPQP 120
NVEPGP HHS P+ E ND+D + VN +H +EI V ++ +PD ND Q
Sbjct: 90 NVEPGPLHHSPPV-GKPDVPDDEIPTNDKDVVKLVNIGIHTNEIPVGDNDDPDAHNDSQS 149
Query: 121 ENQPVADVSRPTRKKFQQNRCNITTKTRRKKISPKIPSVPIDGISFHLEENVQR 170
E QP + RP RKKFQQNRCN+TTKTRRKKI I SVPIDGISFHLEENVQR
Sbjct: 150 ETQPFVEEFRPARKKFQQNRCNMTTKTRRKKIPHNISSVPIDGISFHLEENVQR 202
BLAST of IVF0026405 vs. NCBI nr
Match:
KAA0031748.1 (uncharacterized protein E6C27_scaffold506G00110 [Cucumis melo var. makuwa])
HSP 1 Score: 175 bits (444), Expect = 2.85e-48
Identity = 111/176 (63.07%), Postives = 126/176 (71.59%), Query Frame = 0
Query: 1 MDSDDLDNIPLARLLKKNYVPNVAIEKSTDPILSVHSQGSSSSEDVFVPT-SLHHASNVE 60
MDSD+ ++PLARLLKK +V NVA KS +PI+S SQ SSSSEDVF+PT L+HAS+ E
Sbjct: 160 MDSDEQYDVPLARLLKKGFVLNVASTKSVNPIISARSQESSSSEDVFIPTPGLYHASDQE 219
Query: 61 PGPSHHSVPIRSLVQTISVETLANDEDNGEPVNTDVHDDEILVNESVEPDVRNDPQPENQ 120
P PS HS PIR+ V T VET +DE N +P NTD + VEPDV +D Q E Q
Sbjct: 220 PSPSQHSPPIRNDVPT--VETPIDDE-NVDPTNTDATN-------IVEPDVYDDFQLETQ 279
Query: 121 PVADVSRPTRKKFQQNRCNITTKTRRKKISPKIPSVPIDGISFHLEENVQRWKFVV 175
VSRP KKFQQNR NITTKT RKKI IPSVPIDGISFHLEENVQRWK+VV
Sbjct: 280 QSPGVSRPKGKKFQQNRRNITTKTGRKKIPLNIPSVPIDGISFHLEENVQRWKYVV 325
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7TZT0 | 2.1e-73 | 85.47 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7T1S8 | 1.2e-44 | 65.12 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7T560 | 2.0e-44 | 60.92 | Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold23... | [more] |
A0A5D3BN17 | 5.9e-44 | 56.57 | Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold20... | [more] |
A0A5A7SM94 | 3.2e-42 | 60.80 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
Match Name | E-value | Identity | Description | |
KAA0046861.1 | 3.04e-92 | 85.47 | uncharacterized protein E6C27_scaffold230G00140 [Cucumis melo var. makuwa] >TYK0... | [more] |
KAA0036893.1 | 1.04e-54 | 65.12 | uncharacterized protein E6C27_scaffold1480G00140 [Cucumis melo var. makuwa] >TYJ... | [more] |
TYK01201.1 | 2.28e-53 | 56.57 | envelope-like protein [Cucumis melo var. makuwa] | [more] |
KAA0038133.1 | 3.69e-53 | 60.92 | envelope-like protein [Cucumis melo var. makuwa] >TYK20474.1 envelope-like prote... | [more] |
KAA0031748.1 | 2.85e-48 | 63.07 | uncharacterized protein E6C27_scaffold506G00110 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |