IVF0026373 (gene) Melon (IVF77) v1

Overview
NameIVF0026373
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr10: 12569453 .. 12570915 (+)
RNA-Seq ExpressionIVF0026373
SyntenyIVF0026373
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATTCACTGGACAAAAATTTGTTAATTGGCATTTTAATGAGACAAATTTTTCAACACCAGAAGGAGGAATTCAAAAGTTGAAAAAAGAAATTACATGGAATGCATCATTATTGTTTGGATCTTTGTTCAGATCAATGTGAACTTGAAGTTTAGAAAATAATTCATTTGCAAAATATAGCAAATCAGTTACCAAATGCATTTGTAAATGCAAAGAAAGTAACCAAGTTACATATACTAGCTGCAAATGTCCCATTGAAAATTGATATCCCAATACGACAAGTTGTCACTAATGAATCTAAAACACGCCACAAACGTGCGGTAGACCTATTGGTTCTAAAGCTTAAAATCCTCAAAAAAGAAAGAGAGTCAATAGCTCGACTAATTATATGCATGTTCTAGAAGAAATCCAAAATTTGACTCATCACATGAATGTTAAAGAAGATAAAACAACTAAGGATAATAATGAGATTTCGGTAAACTATGGTCATGACAGAAAAATGATGGAACCAATGTAGTTGTTGACAACATTTTTGCATACAATCACTACAAGAAAAAAGACCTATTATGACAGTTCATTACATCCCAAATTGAAAGGAGGGAAGAAAAAAATATCATAAAATATCAAAATGCGCGTTTTTTGCAGGAAAACATGGTGTTTTCGGATTTCACTGATACATGACAGTTATGGTTATCATAATATGTAAATGTAAAATATTTTTTTAATTCAAATTTATTGAAATAAAAGTTATTTTAAATTAAAAAAGAAACAAAGTGCAAAATCTCTCCATCTCCCTGAAATCAAAAACCCTTCATTCCCCTTTCCTTCTTCAAATGCAAAAACGATTTCCCCTTTCCTTCTTCAAACGCAAAAGTCATCCAACATTTGCTCTACTTCCTTAAATTTTCATCCCTCTGACAACTCAACCCCTTCCTTTCTAAGCTTTTTCCCTCTCTCTTCAGAGACACATCTGCCATTTACGGTCCTATCGTCACCACCACCAACGACGTTTGGGTTATCGATGATCTTCCTGTCAACCCGTCATTTCAGAAGCTTCTCGAAACTCTCTACCATGAAAAACTCAACCTCGTTGATTTTGTGAACAAGGTACCAATATATTTATACTTCATGATGAACACTTAATTTTAATCGTTAGGGAGTTTTCTAAAATTTTTCAATTTGATGAAACTAATTCGTTAGTAATTTGTAACAATTTCTATGGTTAAAAGCAGCATGAAGAACATTTGAACACCATCGCTCCCTTAACGTCCTTGTCCCCATCTCCTCTCCCTAAACATCGTTGCTACCCTTCGAAGCCCGCTCATGTAGCTGAGTGCATGTAATCGAGCGTCAGCCATTAAGGAGCGCAACAATTTCTCATAACACATTCACAATCATGACCCTTGGAACTCCCCTAGAGCCAGCCACCATCTTCTTCATCCTCCTTTTTTCGAATAATTAA

mRNA sequence

ATGTATTCACTGGACAAAAATTTGTTAATTGGCATTTTAATGAGACAAATTTTTCAACACCAGAAGGAGGAATTCAAAATGCATGTAATCGAGCGTCAGCCATTAAGGAGCGCAACAATTTCTCATAACACATTCACAATCATGACCCTTGGAACTCCCCTAGAGCCAGCCACCATCTTCTTCATCCTCCTTTTTTCGAATAATTAA

Coding sequence (CDS)

ATGTATTCACTGGACAAAAATTTGTTAATTGGCATTTTAATGAGACAAATTTTTCAACACCAGAAGGAGGAATTCAAAATGCATGTAATCGAGCGTCAGCCATTAAGGAGCGCAACAATTTCTCATAACACATTCACAATCATGACCCTTGGAACTCCCCTAGAGCCAGCCACCATCTTCTTCATCCTCCTTTTTTCGAATAATTAA

Protein sequence

MYSLDKNLLIGILMRQIFQHQKEEFKMHVIERQPLRSATISHNTFTIMTLGTPLEPATIFFILLFSNN
Homology
[Close]
BLAST of IVF0026373 vs. ExPASy TrEMBL
Match: A0A0A0KKH1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G152290 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.8e-07
Identity = 37/64 (57.81%), Postives = 46/64 (71.88%), Query Frame = 0 

Query: 5  DKNLLIGILMRQIFQHQKEEFKMHVIERQPLRSATISHNTFTIMTLGTPLEPATIFFILL 64
          +K   +G L  QI    + +++ +V ER+PL SA ISH+TFTI TLGTPLEPATIFFIL 
Sbjct: 8  EKRHRLGRLHNQI---DEWKWRGNVAEREPLWSAAISHDTFTITTLGTPLEPATIFFILP 67

Query: 65 FSNN 69
          F NN
Sbjct: 68 FPNN 68

[Close]
BLAST of IVF0026373 vs. NCBI nr
Match: KGN50063.1 (hypothetical protein Csa_000262 [Cucumis sativus])

HSP 1 Score: 63.9 bits (154), Expect = 1.48e-11
Identity = 37/64 (57.81%), Postives = 46/64 (71.88%), Query Frame = 0 

Query: 5  DKNLLIGILMRQIFQHQKEEFKMHVIERQPLRSATISHNTFTIMTLGTPLEPATIFFILL 64
          +K   +G L  QI    + +++ +V ER+PL SA ISH+TFTI TLGTPLEPATIFFIL 
Sbjct: 8  EKRHRLGRLHNQI---DEWKWRGNVAEREPLWSAAISHDTFTITTLGTPLEPATIFFILP 67

Query: 65 FSNN 68
          F NN
Sbjct: 68 FPNN 68

The following BLAST results are available for this feature:
BLAST of IVF0026373 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0026373 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KKH13.8e-0757.81Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G152290 PE=4 SV=1[more]
BLAST of IVF0026373 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN50063.11.48e-1157.81hypothetical protein Csa_000262 [Cucumis sativus][more]
BLAST of IVF0026373 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0026373.1IVF0026373.1mRNA