IVF0026271 (gene) Melon (IVF77) v1

Overview


Name	IVF0026271
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Gag/pol protein
Location	chr04: 29147253 .. 29159476 (-)
RNA-Seq Expression	IVF0026271
Synteny	IVF0026271

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAAGTAGAGAATTTGCTCTCTTAAGGGTTGATTTCAGGGCTTGAACAATGTGGCGCCACACCTCTCTTGGCCTGAGAGGAGTTCAGTTATAGTAGGACTATATTATTGTTCATTAGAGGAATCAATGGTACTAAGGAGTTAGATGTAACTACAGGGCAAAACGGTAATTTTGGCCTAGCTGTACTTACGAGCAATTTGTGAAGGTCATTGCACTGTTGATTGGTTATATCTAATGGACACAAAAATATATCTACAGTTAGAAGAGTGCAACTATTAGTCTTTAGTGGAATGACTAATAGTTAATGATATAGATTAAATTAATTAAAGAGTTTAATTAATTAATCTCATTTCATTAGAGCTTCAATGTAGGTCCATAAGGTCCCCTTGTTAGCTCAATAAGGATAAATGAGAATCAAATTTATTTTGGTTTAATTTGAATTGTTCAATTGATTAAGGGAATAAATTGTATATGATACAATTAATATAATTATTTGATACATTATAATGTAAAGTTTTTTATGAGAGAAGTTAATATTTGAATATGATTCAAATAATAATAGTAATATGAATGAGATTCATAAATAAACTATAGGTAAAATTGAATTCGATTCATATTAGAACTATAGATTATATGAGAGATCTAAATCATTGGTATATTATATATGATATAATATAAAGTTTATTTATATGAGATATAATATATTGTAATTAAATTTATATATTTTATGTTATAGAGATATAATATATATTAATTAAATTTATATTGATTTTATTTAATTAATTAATATATATTATATATATTAATATATTTAAATAGAATAGAATAACTCCCTGGGAGTTATTCTACGTGGGAAGGATGGGGAAGTTATTTGATAACTCCCCCTCCATTGTGAGATTTGTTTTAAAGAAAATAAAAGAAAGGTTTCTTTTTAACAGCAGAAGACAATCTTACGATCTCTCTGTATCCCAACAAAACAAAATCCTCTCAAAAGCTTCTTCCCTCACCAAAATTACAGAAGCCCACAACTCTCTGTGATTCTTTACTGGAGAATAACGAGGAAGATTTTGTGGTGCCACGAAGCTTGGAAGAAGAATTGGTTCTACAAAGGTCAGTTTATTTTCACCTTTCCATGAAAAGCATGTTATTTTTCTTGAATTTATGGTTTCATAAATTGAATTTCACTCGCACGGGCGTTCATAAGCTTTCGCTTTAGGAATTCCATTCCTTCAATTGGTATCAGAGCCAATCGTGCAATTGTTTTTTCAATTTTTTTTGAAACAAAATTCAAAGAAAAGGTGGGTATTTTTCTCTGCATTGTTGTATGTGGGTTTGCAAAATAGATGTTTTCGATTTTGGCACCTTAGATTACAATTTTTTATTTTTCATTAATTTGATTGATGTAAGGGCTGTTGTTTTGGCCATTTTAATTCTGTAATCGAGTCTGTAAGTCCATGTCGTTCGAGGCAAGTGTTGCTGGGTTGATGAACGATTTCGGAGGCATTACGGAGTTTTTTTTTTCCAGTTCGTACAGATTCAAATCTGTACAGAGTTGCAGCAGATTTGTTATAAAAAAAAAAAAAAAAACAAAACAAAAAATATATCTATTATGCGCGCTTCCAACATCGTGGATTGCTTCCTGGTGCAGTGGCTTGTGTCCATTTCTGTTGCAGAGGTCGTGGGTCGAGTTCCAGATCGTGCGGTTTTTCATTTTTTTTTTGTTTCAATAATTAAATTAATATAATTGATTATATTAATTTGATTATTTTTTTAGGAGTGCCAAATTCGGTCTATTTTGCTTTAATATTTTACTGCATGTGATGTTTTATTAAACTAATTATATACATAATGTATGTCATATAGTTTAAAATCACCTTAGGATTATAATTATCATGCATCATACTTAAATATAAGTGTTGTATTTTAGTTGCATGATTTTCTAAGCATGCTCATGCATCATATTTAATATAATTGTTATATTATATGATAGCATGTATAATTAATATATCCATGCATCATCCTATAATTTAACATGTTGTATTATATAGTTTGATTGATGGATGTTTTTATTTTCATTGCATTAATATAATTGTTGTATTGTGTGATGAAAATGAAAATGCATTGAGCATGTCATTACTTAGAGAATATATATATTAAATGACATTAGAATTGCATGTTTATAGTTTTTAATTATTTTCTTTCCTTATAAGTGTTATAAGTTTATGAATTTAGAATTAAAATCTATAATAAAGAGTTGCATGCTAACATAAGGTCACAATTAGTTTTAAATAGTTTAAAATTAATTCACCTAGACCTTAATGAATAATATTTCTAATGAGATTAGAAATAGGGTTAATCTTTTCTCGTTTTATTAGGATTAAAATGATATCAATAAAAGATTAAATTTATAAAATATTTGTCTATAAGGGACCTTTGTCTAAGGAAGGTTCTGTCTAGGCTGGGGTACTTAAGCTGACGGTAACGGAACACCCCTACCTGGGAACTGACCTGGAAGGTGAATTAGTCAAACATTTTATAAGCATGCAATACATGATTATATTTATCAAAGTGTTTGATGAACAATAATCATATATTGTTAAACAATCCAATATAAGAGTTATATTGGGCCAATTTAACAATGGACTTAGATAAATAATTAGCCGTATTTTCTAAGTTGTTTTTTAAGTAAAACACTAAGTGGGAGGAAATGAGGTATATGATACTTCATTTTTCTTTTCATGTTTCTCCTTAAACATTCACACCGTGAGACTTATGCTCGGCCTCGAGGCACCTTTGCTTGTGTCCCCCTACGGATGGTGTTTGTGTAAGTCAATAACAAGGTGAATGGAGATAGTGTTTATAGTAAGTGGGAGAGGGATGTGTGTCAACACATCCCGCGGTCTCTTTCATTAGTTTTTAGTAAATTCTCATGCTTGGCCTTGAGGCACCTTTGCTTGTGTTCCCCTACGGAAGGTGTTTGCATTAGATTTTACTCAAACTCCAGAAATGGATAAGATTTCTTTAGTTTTTGCTCCAATCGGTTTTTTCCCTACGGATTACTTATTGGGGCGGAACTCTAGAATCTAAAATGAAAGGTTACACTTACAAGAAATTTTTAAGTAAGTTAATCATTTCTTGACTAAACAATGATGACTAACTATTATAGGAATAAGAGTTATTCTAGTGTAATATTTAGTTGAGATTGTCTCAATTTAGTGAAGGGATAATTAATCACCCTACGGAGATTTTTTATCCTACCTCACTGAAGCATCATTGCAAAATAGATATCACTTAGGATACATTAAAATTTTGCTAAATTGATTGGTTTTATATGGAAAATGCTAGTATAACTAATATAAATAAATTGTATGTTTTCAGTAATTTGATAATGACGAGTGCTACTTTGAATATGCTGGCTGCTGATAAACTTAATGGCAATAATTATGCATCTTGGAAAAATACTATCAACACTGTGCTAATCATCGATGACCTTAGATTTGTCCTAGTTGAGGAGTGTCCTCAAGTCCCAGCTGCTAATGCAACTCGAACTGTTCGAGAACCATATGAGCGTTGGGCCAAGGCAAATGAAAAGCCCGAGCATACATCTTGGCAAGCTTATCTGAAGTATTGGCCAAGAAACATGAATCAATGCTCACTGCTCGTGAGATTATGGACTCCTTGCAGGAGATGTTTGGTCAGGCCTCTTATCAGATCAAGCATGATGCTCTGAAATACATTTATAATGCCCGTATGAATGAGGGAGCCTCAGTGCGAGAACATGTTCTCAATATGATGGTTCATTTCAACGTGGCAGAAATGAATGGGGCTGTCATCGATGAAGCCAGTCAGGTTAGCTTTATTTTGGAATCTCTGCCAGAGAGTTTCCTGCAATTTAGAAGCAATGCTGTTATGAATAAGATTGCTTATACCCTTACCACCCTTCTCAACGAGCTACAGACTTTTGAGTCTCTGATGAAAATCAAGGGACAGAAGGGAGAGGCAAATGTTGCTACTTCCACAAGAAAGTTCCATAGGGGTTCGACCTCAGGAACAAAGTCTATGCCTTCTTCATCTGGCAATAAGAAGTGGAAGAAGAAGAAGGGTGGCCAAGGAAATAAAGCTAACCTCGCTGCTGCTAAAACGACCAAGAAAACCAAAGCTGCAAAGGGAATATGTTTCCATTGCAACCAAGAGGGACATTGGAAGAGAAACTGTCCCAAGTACTTGGCAGAAAAGAAGAAGGCTAAACAAGGTAAATATGATTTACTAGTGCTAGAGACTTGTTTAGTGGAAAATGATGATTCAGCCTGGATAATAGATTCAGGTGCCACTAATCATGTTTGTTCTTCATTTCAGGGAATTAGTTCCTGGCGGCAGTTGGAGACTGGAGAGATGACGATGCGAGTTGGAACTGGGCATGTCGTCTCAGCAATTGCAGTGGGAGGGCTTCGACTTTGTTTACAGAAATCTTTTCTTTTATTAGAAAATGTATATGTTGTTCCTGATTTAAAAAGGAATTTGATTTCTGTAAAGTGCTTACTAGAACAATCTTACTCGTTAACTTTTAATGTAAATAAAGTGTTTATTTACAAAAATGGTGTTGAGATTTGTTCTGCAAAGTTAGAAAATAATCTTTATGTGTTAAGATCATTAACATCTAAAGCTCTTCTTAATACTGAAATGTTCAAAACTGCAATAACTCAAAATAAAAGACTTAAAATTTCTCCAAAAGAAAATGCTCATCTTTGGCACCTAAGATTAGGGCATATAAATCTCAATAGAATTGAGAGATTAGTAAAGAATGGACTTCTAAGTGAGTTAGAAGAAAATTCTTTACCTGTATGTGAGTCATGCCTTGAAGGTAAGATGACCAAAAGACCTTTTACTGGAAAAGGTCATAGGGCCAAAGAACCTCTAGAACTTGTACATTCAGATCTATGTGGTCCTATGAATGTTAAAGCAAGAGGAGGATTTGAATATTTCATCACTTTTACTGATGATTATTCAAGATATGGGTATGTTTATTTAATGCAACATAAGTCTGAAGCCCTTGAAAAGTTCAAGGAATACAAGGCTGAAGTTGAAAACGCATTAAGTAAAACTATTAAAACATTTCGATCGGATCGAGGTGGAGAGTATATGGATTTGAAATTCCAAAACTATTTGATGGAATGTGGAATTGTATCTCAACTCTCAGCACCTGGTACACCTCAACAGAATGGTGTATCAGAAAGGAGAAATCGAACCTTGTTGGACATGGTTCGGTCTATGATGAGTTACGCTCACTTACCTAATTCGTTTTGGGGTTATGCAGTGCAAACTGCAGTCTATATTTTGAATTGTGTTCCATCTAAAAGTGTTTCTGAAACACCTTTAAAATTATGGAATGGTCGTAAAGGTAGTTTACGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTGCTTGAGAATAACCCTAAGAAATTGGAACCTCGTTCAAAATTATGTTTATTTGTAGGCTACCCCAAAGGAACTAGAGGTGGTTACTTCTATGATCCTAAAGATAATAAAGTGTTTGTATCGACAAATGCTACATTTTTAGAAGAGGACCACATAAGGGAGCACAAACCGCGTAGTAAGATAGTATTAAATGAACTTTCCAAAGAAACTACTGAACCTTCAACAAGAGTTGTTGAAGAGCCTAGTGCATTAACAAGAGTTGTTCATGTCGGTTCATCTACTAGGACACATCAACCTCAATCGTTGAGGGAACCTCGACGAAGTGGGAGGGTTACAAACTTACCTATTCGTTATATGAGTTTAACTGAAACCTTAACTGTCATATCTGATGGCGACATTGAGGATCCATTGACTTTTAAGAAGGCAATGGAGGATGTGGATAAAGATGAATGGATCAAAGCTATGAATCTTGAATTGGAGTCTATGTACTTCAATTCGGTCTGGGATCTTGTAGATCAACCTGATGGGGTAAAACCTATAGGTTGTAAATGGATCTACAAGAGAAAAAGAGGTGCAGATGGTAAGGTACAAACTTTTAAAGCTAGACTAGTGGCAAAGGGTTATACCCAAGTTGAGGGAGTTGACTATGAGGAGACTTTCTCACCTGTTGCCATGTTAAAGTCTATTCGAATACTTTTGTCCATTGCTGCATATTTTGACTATGAGATTTGGCAAATGGATGTAAAGACTGCCTTTTTGAATGGCAATCTTGAGGAGACCATCTATATGCAACAACCAGAAGGATTCATAATTCCAGGTCAAGAGCAAAAGATTTGCAAGCTTAATCGTTCTATTTATGGATTAAAACAAGCTTCTCGATCTTGGAACATAAGATTTGATACCGCAATAAAATCTTATGGATTTGATCAAATCGTTGATGAACCTTGTGTCTACAAAAGAATCATCAACAAATCAGTAGCTTTCTTAGTTTTGTACGTAGATGATATCCTACTCATTGGGAATGATATAGGTTTACTAACTGACATCAAACAATGGCTAGCAACCCAATTTCAAATGAAAGATTTGGGAGAGGCACAATTTGTTCTGGGTATTCAGATCTTTAGAGATCGTAAGAACAAAATGCTAGCTTTGTCTCAAGCATCGTATATTGACAAAATAGTTGTTAAATATTCAATGCAAAACTCCAAGAGAGGCTTACTACCTTTCAGGCATGGAGTTACTTTGTCTAAAGAACAGTGTCCTAAGACACCTCAAGACGTTGAGGAAATGAGACATATCCCCTATGCATCAGCTGTTGGCAGCTTGATGTATGCGATGTTATGTACTAGACCTGACATTTGTTATGCGGTGGGGATAGTCAGTAGATATCAATCTAATCCAGGATTAGCTCATTGGACTGCCGTTAAAACTATCCTCAAGTATCTTAGGAGAACGAGGGACTACACGCTTGTGTATGGTTCTAAGGATTTGATTCTTACAGGATACACAGACTCTGACTTTCAGACTGATAGAGATTCTAGGAAATCTACTTCAGGTTCAGTGTTCACTCTTAACGGAGGAGCTGTAGTTTGGAGAAGTATCAAGCAAGGATGTATTGCTGACTCCACTATGGAGGCAGAGTACGTTGCAGCTTGTGAAGCTGCCAAAGAGGCTGTTTGGCTTAGAAATTTCTTGATTGATTTGGAAGTCGTTCCAAACATGTCAAAGCCAATTACTCTTTACTGTGATAATAGTGGGGCTGTGGCTAATTCTAGGGAGCCCAGAAGCCACAAGCGTGGAAAGCATATTGAGCGCAAGTATCACTTGATTCGAGAGATAGTGCATCGAGGGGACGTGATCGTCACACAGATAGCTTCGACACACAATGTTGCTGATCCGTTTACAAAGCCCCTCACGGCTAAGGTGTTTGAGGGTCACCTAGAGAGTCTGGGTCTACGTGACATGCCACATTTAACCTAGGGCAAGTGGGAGATTTACTGGGTGCATATTGTATGCCCTAGTTTCTTGTTTTGTGTACTATTATAGTATTTTATTTTTTTATTTTGTACACCCCACTAGCTTTAGGACAAGTGGGAGATTGTTGGGGTTGATGCCCTAAATCTCGTGGTCTTGTAGTTTGTAATTGTATATATAATACAAACTTTTTATTTATCTAATAAAATAAAGTGTTTTATTTTATTTGATTTGATATTTAGTTGCATTAACTCACAAAACCAATAAACTAACATCCAAGGTTATCTTCTGTAACCTAAACATGTATGTAGAGACATACAAGTGGATCATGTTTAAGTGATAACCTAAATGGTCTGTAGTAAATGGATAAGGCTGGATACCTTATCCTGGTGACACTACGAATACGGTCTGCTTTGTAGTTGTTACAATTGTTCTAAAGTGCTACAAATGATTTGATCCTAATCATTTATGTCGAGACATTAGAGCGGGGGTATTCTATACAAAGAGTTTGTATAAGACCGGACCATGAAATGAATAGTCTCTCTTATTAACACCGTTACTAGTTGAGACTACATTTCACCAGGATGACTATAGGTGACTTGACCTGAATCTTGAGTGAGTTGTGAACTCCTGCCTATGTAGGCGATCCTTTGATTTGTATGGGTGAGAGTGGCCTATGTAGCCGACTCAATATGCCTACCATTTTGGGGATTCGTCTGATTGGGGAGCTGGGAACGCAGCTACACAAGAAGGAATTCACTCCTTCTCTATAGATGGAGTAAGTAGAGAATTTGCTCTCTTAAGGGTTGATTTCAGGGCTTGAACAATGTGGCGCCACACCCTCTCTTGGCCTGAGAGGAGTTCAGTTATAGTAGGACTATAATTATTGTTCATTAGAGGAATCAATGGTACTTAAGGAGTTAGATGTAACTACAGGGGCAAAACGGTAATTTTTGGCCTAGCTGTACTTACGAGCAATTTGTGAAGGGTCATTGCACTGTTGATTGGTTATATCTAATGGACACAAAAATATATCTACAGTTAGAAGAGTGCAACTATTAGTCTTTAGTGGAATGACTAATAGTTAATGAATATAGATTAAATTTAATTAAAGAGTTTAATTAATTAATCTCATTTCATTAGAGCTTCAATCTGTAGGTCCATAAGGTCCCCTTGTTAGCTCAATAAGGATAAATGAGAATCAAATTTATTTTGGTTTAATTTGAATTGTTCAAATTGATTAAAGGGAATAAATTGTATATGATACAATTAATATAATTTATTTGATACATTATAATGTAAAGTTTTTTATGAGAGAAGTTAATATTTGAATATGATTCAAATAATAATAGTAATATGAATGAGATTCATAAATAAACTATAGGTTAAAATTGAATTCGATTCATATTAGAACTATAGATTATATGAGAGATCTAAATCATTGGTTATATTATATATGATATAATATAAAGTTTATATTATATGAGATATAATATATTTGTAATTAAATTTATATTAATTTTATGTTATATGAGATATAATATATATTAATTAAATTTATATTGATTTTATTTAATTTAATTAATATATATATATATATATATTAATATATTAAATAGAATAGAATAACTCCCAAGGGAGTTATTCTACGTGGGAAGGATGGGGAAGTTATTTGATAACTTCCCCCTCCATTGTTGAGATTTGTTTTAAAAGAAAATAAAAAGAAAGGTTTCTTTTTTAACAGCAGAAGACAATCTTACGATCTCTCTGTATCCCAACAAAACAAAATCCTCTCAAAAGCTTCTTCCCTCACCAAAATTACAGAAGCCCACAACTCTCTGTGATTCTTTACTTGGAGAATAACGAGGAAGATTTTGTGGTGCCACGAAGCTTGGAAGAAGAATTGGTTCTACAAAGGTCAGTTTATTTTCACCTTTTCCATGAAAAGCATGTTTATTATTTTTCTTTGAATTTATTGGTTTCATAAATTGAATTTCACTCGCACGGGCGTTCATAAGCTTTCGCTTTAGGAATTCCATTCCTTCACCTTATCTTCTCCTCTCTCTGGAAGAGTACAATTCCCAAGAAGGTCAAATTCTTCGTGAGCACGTTTTGCACAGAAGAATTAATAACTTACTGTGTTCAGTGACGATCATCTTTTGTGTTGATCTTGGAATGGTACATTTTTTGTTGGATCATGACAAGGATATTGATCCTTTGTTAGTGGAGTTCTCGTTTGTTCATTCTCTGTGGAGCGAAATGCTTGACTGCATTTGACTTATCTCTTGCTTGTGGCATACAGTGCAGCTCATGGTTGAAGAGATGCTTTTGAATCTCCTGTTTCCTGATAAAGGAAGGTTTTATAGTAGCTTTGTTTCTTTGCAGTCTTGTGGAGGATTTGGTTTGTGAAAGATAGTATAATTTTTAAGGAGGCTGAGGGATCTTTAAGAGGAGGTTTGGGAGATTGTAAGATTAATGGGTGATTATTGTCGTCCATTGCCTGACCTTTTTTTTCTTCTGTAATCATGATGTTGGTTTGATCATATTTGAGTACAATTGGGGTTATGGGGACCTGAACCTTCGATCAAGGAGTACATATTAACTATCTTTGAGCTATCACTTTACCCTTGGGTTTGATCCTTTTGGTAGGTTTGTTTCTTTAATTAGTGTTTGACTGTTTGTACTTTCTTTTGTGTGGGATTAGGTCTTGTACATTCTTTCATTTTCCTCAGTGGAAGCTTGGTTTCTTACCAAAAAAATCACGATCTACCCCACTTATTGAGATCACTAGGGTTTTTGGCCAAAATGACCAAGATAGAAGATTTGTTTTTCCAGACAGTCTCCTTGTCTGCTTTAACTTCACAATTTCACATGCACGTGCACATTTGGCTTCCTTCTACTGAACTTTCTTCCAAATTATGAAAATTCATTAAAATAAGAATTTAATACTTTAGTGTACAATGTATTTGAAGGGATCCAAAATTTTCATTTTTCTATTTGCCACCAAAAAAATGTTCTTAACATTCTTTTCTTAAAAGTCGATGGACTTTAATATTTTGGAAAAACAAGAATGAAAGGAAGAAACTGATGAATGAAGAGAAAAAAGATAAGGGAGTAACTGAAAATGGATCTTGGAAGATGAGGAGGATGAGAAAGATCAAGGGGGATGCGAAATTAGAGGGTTGAAACGTGTTTCTTTAATCCTCGCTTAATTGAGGTGCAACTTCTAAGCAATTATGGTCAAAAGATTTTGGCTGAGATCATTTGTAGATCTTAGACCAGGGAATCTTCTCTCTAAGGGGCCTTTGGCACCCAAGTTGAGTTGAGTTAAGTTGGGTTTTTAAAAACCCATCCACCATTTAGGAGTACTAATAATTCAAGAGGTTTATTATCTCGTTATTTGCATTAACTCACATTTCTCACCTTATTAACACAATTTCTTACTTCGTTTTTTGTTGTCAACTCCCCCAATTACTCATTCCTATAATAATTGCAACTCAACTCAACTCTTCAAGAAAAACTTTAACCAATAATTGGTGCAAAGTTGTGAATATTTGCATGTAAGCTTCATAAGGACATTCTTCAATGCTTAGTTCCTAGAAAGAACTATGCTTGATTGTTGAATGTATTGGTCGGAAGGTCAATCTTCTTTGTAGTTCACTGGGAGGTGATTTCTTCTTCTCCTATTGGGCTTAAGCTGTCAATATTCCTATCCCATTCATCAATTAGTTGAATTACCATTCTATTATTTGATTTGGGTCGCCTCCATTGGTACAATACATGCTTCTGCTTCATACTTGTAAGCGTAGTTATGGTTATTATTTATGGTAACAATTACATATCTCGTGATAAAGGATCATTGTGATTGTTTTGTTTAGCTCCTGAAGGGAGGTAACATATTAATTTTGTTATGTTTTTGAGGCAAAGCACCAAGAGCTCAAAGGATAATCTTTATTAATAAAGAAAACTAATAGCTAAAGGCCAATTTATACCTAAGCTACCGGTGAAAGTAACCTAAGTAGCCGGTCACAAAATAGTGAAATAACAAATGAAAACATAACTAAGCTACCCAAAATAAAGGTTAACACTGAAGAAGTACAATAAAACGAAGGTGTTTAAAACTATCTCATCAGGTTTTCTTCTTTTGGGCTAAAATATCTAACTGGTGATATGGTTTATGTTACACTTTAATTTACACGACTAGATATTTAGTCAAAAGAACGAAGAAGTGGCCCGATATTGTTTCCTAATGTTTAAGGCCTTTTCTATTTAATTCCTATTGTTTAAGAAGCTTTTACATATCTTATGTTTTAATTTGGCAATGATAATTTTACATTGCACAACTCTTACTGCATAGACAAAAATTTAGAGGAAAAACAAAAGGTTGGGCTCTATTAATGATACGACTAAATGTTGGTTGCATCATTTTTGTACAGGCCAACCGAAGTGATACAGTCCAACAAGGAATTTACGGAAGAGGATGTAACAGATCAGATGGTCAATAGGTCATTCCCGTTGGGATCATCAGAACATCGACCCTTTGATTTCCCTGGACTCCGTAGCGATATCGATGCCATTGAACAGAGTCTCTTTGGTAGCATGAAGGGGTTCTTTGAAGCAGCTGAAGAGATTAAGAATGGTTTCTTTGGTTCTTTAAGAGATCCACCCCTATTCAATAGAGATTCTTCCTCTCCCGGATCGATGAGACGTGGTATACCGATTGAAGATCATGATCCAGAGTTCTTCTCCAACCCAAAAGAGCCCGATTCTGGTCACGTTGACCTATCTGGATTGGCCAGGGATGTCTAA

mRNA sequence

ATGAAGCCCACAACTCTCTGTGATTCTTTACTGGAGAATAACGAGGAAGATTTTGTGGTGCCACGAAGCTTGGAAGAAGAATTGGTTCTACAAAGTAATTTGATAATGACGAGTGCTACTTTGAATATGCTGGCTGCTGATAAACTTAATGGCAATAATTATGCATCTTGGAAAAATACTATCAACACTGTGCTAATCATCGATGACCTTAGATTTGTCCTAGTTGAGGAGTGTCCTCAAGTCCCAGCTGCTAATGCAACTCGAACTGTTCGAGAACCATATGAGCGTTGGGCCAAGGCAAATGAAAAGCCCGAGCATACATCTTGGCAAGCTTATCTGAAGTATTGGCCAAGAAACATGAATCAATGCTCACTGCTCGAGATGTTTGGTCAGGCCTCTTATCAGATCAAGCATGATGCTCTGAAATACATTTATAATGCCCGTATGAATGAGGGAGCCTCAGTGCGAGAACATGTTCTCAATATGATGGTTCATTTCAACGTGGCAGAAATGAATGGGGCTGTCATCGATGAAGCCAGTCAGGTTAGCTTTATTTTGGAATCTCTGCCAGAGAGTTTCCTGCAATTTAGAAGCAATGCTGTTATGAATAAGATTGCTTATACCCTTACCACCCTTCTCAACGAGCTACAGACTTTTGAGTCTCTGATGAAAATCAAGGGACAGAAGGGAGAGGCAAATGTTGCTACTTCCACAAGAAAGTTCCATAGGGGTTCGACCTCAGGAACAAAGTCTATGCCTTCTTCATCTGGCAATAAGAAGTGGAAGAAGAAGAAGGGTGGCCAAGGAAATAAAGCTAACCTCGCTGCTGCTAAAACGACCAAGAAAACCAAAGCTGCAAAGGGAATATGTTTCCATTGCAACCAAGAGGGACATTGGAAGAGAAACTGTCCCAAGTACTTGGCAGAAAAGAAGAAGGCTAAACAAGGTAAATATGATTTACTAGTGCTAGAGACTTGTTTAGTGGAAAATGATGATTCAGCCTGGATAATAGATTCAGGTGCCACTAATCATGTTTGTTCTTCATTTCAGGGAATTAGTTCCTGGCGGCAGTTGGAGACTGGAGAGATGACGATGCGAGTTGGAACTGGGCATGTCGTCTCAGCAATTGCAGTGGGAGGGCTTCGACTTTGTTTACAGAAATCTTTTCTTTTATTAGAAAATGTATATGTTGTTCCTGATTTAAAAAGGAATTTGATTTCTGTAAAGTGCTTACTAGAACAATCTTACTCGTTAACTTTTAATGTAAATAAAGTGTTTATTTACAAAAATGGTGTTGAGATTTGTTCTGCAAAGTTAGAAAATAATCTTTATGTGTTAAGATCATTAACATCTAAAGCTCTTCTTAATACTGAAATGTTCAAAACTGCAATAACTCAAAATAAAAGACTTAAAATTTCTCCAAAAGAAAATGCTCATCTTTGGCACCTAAGATTAGGGCATATAAATCTCAATAGAATTGAGAGATTAGTAAAGAATGGACTTCTAAGTGAGTTAGAAGAAAATTCTTTACCTGTATGTGAGTCATGCCTTGAAGGTAAGATGACCAAAAGACCTTTTACTGGAAAAGGTCATAGGGCCAAAGAACCTCTAGAACTTGTACATTCAGATCTATGTGGTCCTATGAATGTTAAAGCAAGAGGAGGATTTGAATATTTCATCACTTTTACTGATGATTATTCAAGATATGGGTATGTTTATTTAATGCAACATAAGTCTGAAGCCCTTGAAAAGTTCAAGGAATACAAGGCTGAAGTTGAAAACGCATTAAGTAAAACTATTAAAACATTTCGATCGGATCGAGGTGGAGAGTATATGGATTTGAAATTCCAAAACTATTTGATGGAATGTGGAATTGTATCTCAACTCTCAGCACCTGGTACACCTCAACAGAATGGTGTATCAGAAAGGAGAAATCGAACCTTGTTGGACATGGTTCGGTCTATGATGAGTTACGCTCACTTACCTAATTCGTTTTGGGGTTATGCAGTGCAAACTGCAGTCTATATTTTGAATTGTGTTCCATCTAAAAGTGTTTCTGAAACACCTTTAAAATTATGGAATGGTCGTAAAGGTAGTTTACGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTGCTTGAGAATAACCCTAAGAAATTGGAACCTCGTTCAAAATTATGTTTATTTGTAGGCTACCCCAAAGGAACTAGAGGTGGTTACTTCTATGATCCTAAAGATAATAAAGTGTTTGTATCGACAAATGCTACATTTTTAGAAGAGGACCACATAAGGGAGCACAAACCGCGTAGTAAGATAGTATTAAATGAACTTTCCAAAGAAACTACTGAACCTTCAACAAGAGTTGTTGAAGAGCCTAGTGCATTAACAAGAGTTGTTCATGTCGGTTCATCTACTAGGACACATCAACCTCAATCGTTGAGGGAACCTCGACGAAGTGGGAGGGTTACAAACTTACCTATTCGTTATATGAGTTTAACTGAAACCTTAACTGTCATATCTGATGGCGACATTGAGGATCCATTGACTTTTAAGAAGGCAATGGAGGATGTGGATAAAGATGAATGGATCAAAGCTATGAATCTTGAATTGGAGTCTATGTACTTCAATTCGGTCTGGGATCTTGTAGATCAACCTGATGGGGTAAAACCTATAGGTTGTAAATGGATCTACAAGAGAAAAAGAGGTGCAGATGGTAAGGTACAAACTTTTAAAGCTAGACTAGTGGCAAAGGGTTATACCCAAGTTGAGGGAGTTGACTATGAGGAGACTTTCTCACCTGTTGCCATGTTAAAGTCTATTCGAATACTTTTGTCCATTGCTGCATATTTTGACTATGAGATTTGGCAAATGGATGTAAAGACTGCCTTTTTGAATGGCAATCTTGAGGAGACCATCTATATGCAACAACCAGAAGGATTCATAATTCCAGGTCAAGAGCAAAAGATTTGCAAGCTTAATCGTTCTATTTATGGATTAAAACAAGCTTCTCGATCTTGGAACATAAGATTTGATACCGCAATAAAATCTTATGGATTTGATCAAATCGTTGATGAACCTTGTGTCTACAAAAGAATCATCAACAAATCAGTAGCTTTCTTAGTTTTGTACGTAGATGATATCCTACTCATTGGGAATGATATAGGTTTACTAACTGACATCAAACAATGGCTAGCAACCCAATTTCAAATGAAAGATTTGGGAGAGGCACAATTTGTTCTGGGTATTCAGATCTTTAGAGATCGTAAGAACAAAATGCTAGCTTTGTCTCAAGCATCGTATATTGACAAAATAGTTGTTAAATATTCAATGCAAAACTCCAAGAGAGGCTTACTACCTTTCAGGCATGGAGTTACTTTGTCTAAAGAACAGTGTCCTAAGACACCTCAAGACGTTGAGGAAATGAGACATATCCCCTATGCATCAGCTGTTGGCAGCTTGATGTATGCGATGTTATGTACTAGACCTGACATTTGTTATGCGGTGGGGATAGTCAGTAGATATCAATCTAATCCAGGATTAGCTCATTGGACTGCCGTTAAAACTATCCTCAAGTATCTTAGGAGAACGAGGGACTACACGCTTGTGTATGGTTCTAAGGATTTGATTCTTACAGGATACACAGACTCTGACTTTCAGACTGATAGAGATTCTAGGAAATCTACTTCAGGTTCAGTGTTCACTCTTAACGGAGGAGCTGTAGTTTGGAGAAGTATCAAGCAAGGATGTATTGCTGACTCCACTATGGAGGCAGAGTACGTTGCAGCTTGTGAAGCTGCCAAAGAGGCTGTTTGGCTTAGAAATTTCTTGATTGATTTGGAAGTCGTTCCAAACATGTCAAAGCCAATTACTCTTTACTGTGATAATAGTGGGGCTGTGGCTAATTCTAGGGAGCCCAGAAGCCACAAGCGTGGAAAGCATATTGAGCGCAAGTATCACTTGATTCGAGAGATAGTGCATCGAGGGGACGTGATCGTCACACAGATAGCTTCGACACACAATGTTGCTGATCCGTTTACAAAGCCCCTCACGGCTAAGAATAACGAGGAAGATTTTGTGGTGCCACGAAGCTTGGAAGAAGAATTGGTTCTACAAAGGCCAACCGAAGTGATACAGTCCAACAAGGAATTTACGGAAGAGGATGTAACAGATCAGATGGTCAATAGGTCATTCCCGTTGGGATCATCAGAACATCGACCCTTTGATTTCCCTGGACTCCGTAGCGATATCGATGCCATTGAACAGAGTCTCTTTGGTAGCATGAAGGGGTTCTTTGAAGCAGCTGAAGAGATTAAGAATGGTTTCTTTGGTTCTTTAAGAGATCCACCCCTATTCAATAGAGATTCTTCCTCTCCCGGATCGATGAGACGTGGTATACCGATTGAAGATCATGATCCAGAGTTCTTCTCCAACCCAAAAGAGCCCGATTCTGGTCACGTTGACCTATCTGGATTGGCCAGGGATGTCTAA

Coding sequence (CDS)

ATGAAGCCCACAACTCTCTGTGATTCTTTACTGGAGAATAACGAGGAAGATTTTGTGGTGCCACGAAGCTTGGAAGAAGAATTGGTTCTACAAAGTAATTTGATAATGACGAGTGCTACTTTGAATATGCTGGCTGCTGATAAACTTAATGGCAATAATTATGCATCTTGGAAAAATACTATCAACACTGTGCTAATCATCGATGACCTTAGATTTGTCCTAGTTGAGGAGTGTCCTCAAGTCCCAGCTGCTAATGCAACTCGAACTGTTCGAGAACCATATGAGCGTTGGGCCAAGGCAAATGAAAAGCCCGAGCATACATCTTGGCAAGCTTATCTGAAGTATTGGCCAAGAAACATGAATCAATGCTCACTGCTCGAGATGTTTGGTCAGGCCTCTTATCAGATCAAGCATGATGCTCTGAAATACATTTATAATGCCCGTATGAATGAGGGAGCCTCAGTGCGAGAACATGTTCTCAATATGATGGTTCATTTCAACGTGGCAGAAATGAATGGGGCTGTCATCGATGAAGCCAGTCAGGTTAGCTTTATTTTGGAATCTCTGCCAGAGAGTTTCCTGCAATTTAGAAGCAATGCTGTTATGAATAAGATTGCTTATACCCTTACCACCCTTCTCAACGAGCTACAGACTTTTGAGTCTCTGATGAAAATCAAGGGACAGAAGGGAGAGGCAAATGTTGCTACTTCCACAAGAAAGTTCCATAGGGGTTCGACCTCAGGAACAAAGTCTATGCCTTCTTCATCTGGCAATAAGAAGTGGAAGAAGAAGAAGGGTGGCCAAGGAAATAAAGCTAACCTCGCTGCTGCTAAAACGACCAAGAAAACCAAAGCTGCAAAGGGAATATGTTTCCATTGCAACCAAGAGGGACATTGGAAGAGAAACTGTCCCAAGTACTTGGCAGAAAAGAAGAAGGCTAAACAAGGTAAATATGATTTACTAGTGCTAGAGACTTGTTTAGTGGAAAATGATGATTCAGCCTGGATAATAGATTCAGGTGCCACTAATCATGTTTGTTCTTCATTTCAGGGAATTAGTTCCTGGCGGCAGTTGGAGACTGGAGAGATGACGATGCGAGTTGGAACTGGGCATGTCGTCTCAGCAATTGCAGTGGGAGGGCTTCGACTTTGTTTACAGAAATCTTTTCTTTTATTAGAAAATGTATATGTTGTTCCTGATTTAAAAAGGAATTTGATTTCTGTAAAGTGCTTACTAGAACAATCTTACTCGTTAACTTTTAATGTAAATAAAGTGTTTATTTACAAAAATGGTGTTGAGATTTGTTCTGCAAAGTTAGAAAATAATCTTTATGTGTTAAGATCATTAACATCTAAAGCTCTTCTTAATACTGAAATGTTCAAAACTGCAATAACTCAAAATAAAAGACTTAAAATTTCTCCAAAAGAAAATGCTCATCTTTGGCACCTAAGATTAGGGCATATAAATCTCAATAGAATTGAGAGATTAGTAAAGAATGGACTTCTAAGTGAGTTAGAAGAAAATTCTTTACCTGTATGTGAGTCATGCCTTGAAGGTAAGATGACCAAAAGACCTTTTACTGGAAAAGGTCATAGGGCCAAAGAACCTCTAGAACTTGTACATTCAGATCTATGTGGTCCTATGAATGTTAAAGCAAGAGGAGGATTTGAATATTTCATCACTTTTACTGATGATTATTCAAGATATGGGTATGTTTATTTAATGCAACATAAGTCTGAAGCCCTTGAAAAGTTCAAGGAATACAAGGCTGAAGTTGAAAACGCATTAAGTAAAACTATTAAAACATTTCGATCGGATCGAGGTGGAGAGTATATGGATTTGAAATTCCAAAACTATTTGATGGAATGTGGAATTGTATCTCAACTCTCAGCACCTGGTACACCTCAACAGAATGGTGTATCAGAAAGGAGAAATCGAACCTTGTTGGACATGGTTCGGTCTATGATGAGTTACGCTCACTTACCTAATTCGTTTTGGGGTTATGCAGTGCAAACTGCAGTCTATATTTTGAATTGTGTTCCATCTAAAAGTGTTTCTGAAACACCTTTAAAATTATGGAATGGTCGTAAAGGTAGTTTACGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTGCTTGAGAATAACCCTAAGAAATTGGAACCTCGTTCAAAATTATGTTTATTTGTAGGCTACCCCAAAGGAACTAGAGGTGGTTACTTCTATGATCCTAAAGATAATAAAGTGTTTGTATCGACAAATGCTACATTTTTAGAAGAGGACCACATAAGGGAGCACAAACCGCGTAGTAAGATAGTATTAAATGAACTTTCCAAAGAAACTACTGAACCTTCAACAAGAGTTGTTGAAGAGCCTAGTGCATTAACAAGAGTTGTTCATGTCGGTTCATCTACTAGGACACATCAACCTCAATCGTTGAGGGAACCTCGACGAAGTGGGAGGGTTACAAACTTACCTATTCGTTATATGAGTTTAACTGAAACCTTAACTGTCATATCTGATGGCGACATTGAGGATCCATTGACTTTTAAGAAGGCAATGGAGGATGTGGATAAAGATGAATGGATCAAAGCTATGAATCTTGAATTGGAGTCTATGTACTTCAATTCGGTCTGGGATCTTGTAGATCAACCTGATGGGGTAAAACCTATAGGTTGTAAATGGATCTACAAGAGAAAAAGAGGTGCAGATGGTAAGGTACAAACTTTTAAAGCTAGACTAGTGGCAAAGGGTTATACCCAAGTTGAGGGAGTTGACTATGAGGAGACTTTCTCACCTGTTGCCATGTTAAAGTCTATTCGAATACTTTTGTCCATTGCTGCATATTTTGACTATGAGATTTGGCAAATGGATGTAAAGACTGCCTTTTTGAATGGCAATCTTGAGGAGACCATCTATATGCAACAACCAGAAGGATTCATAATTCCAGGTCAAGAGCAAAAGATTTGCAAGCTTAATCGTTCTATTTATGGATTAAAACAAGCTTCTCGATCTTGGAACATAAGATTTGATACCGCAATAAAATCTTATGGATTTGATCAAATCGTTGATGAACCTTGTGTCTACAAAAGAATCATCAACAAATCAGTAGCTTTCTTAGTTTTGTACGTAGATGATATCCTACTCATTGGGAATGATATAGGTTTACTAACTGACATCAAACAATGGCTAGCAACCCAATTTCAAATGAAAGATTTGGGAGAGGCACAATTTGTTCTGGGTATTCAGATCTTTAGAGATCGTAAGAACAAAATGCTAGCTTTGTCTCAAGCATCGTATATTGACAAAATAGTTGTTAAATATTCAATGCAAAACTCCAAGAGAGGCTTACTACCTTTCAGGCATGGAGTTACTTTGTCTAAAGAACAGTGTCCTAAGACACCTCAAGACGTTGAGGAAATGAGACATATCCCCTATGCATCAGCTGTTGGCAGCTTGATGTATGCGATGTTATGTACTAGACCTGACATTTGTTATGCGGTGGGGATAGTCAGTAGATATCAATCTAATCCAGGATTAGCTCATTGGACTGCCGTTAAAACTATCCTCAAGTATCTTAGGAGAACGAGGGACTACACGCTTGTGTATGGTTCTAAGGATTTGATTCTTACAGGATACACAGACTCTGACTTTCAGACTGATAGAGATTCTAGGAAATCTACTTCAGGTTCAGTGTTCACTCTTAACGGAGGAGCTGTAGTTTGGAGAAGTATCAAGCAAGGATGTATTGCTGACTCCACTATGGAGGCAGAGTACGTTGCAGCTTGTGAAGCTGCCAAAGAGGCTGTTTGGCTTAGAAATTTCTTGATTGATTTGGAAGTCGTTCCAAACATGTCAAAGCCAATTACTCTTTACTGTGATAATAGTGGGGCTGTGGCTAATTCTAGGGAGCCCAGAAGCCACAAGCGTGGAAAGCATATTGAGCGCAAGTATCACTTGATTCGAGAGATAGTGCATCGAGGGGACGTGATCGTCACACAGATAGCTTCGACACACAATGTTGCTGATCCGTTTACAAAGCCCCTCACGGCTAAGAATAACGAGGAAGATTTTGTGGTGCCACGAAGCTTGGAAGAAGAATTGGTTCTACAAAGGCCAACCGAAGTGATACAGTCCAACAAGGAATTTACGGAAGAGGATGTAACAGATCAGATGGTCAATAGGTCATTCCCGTTGGGATCATCAGAACATCGACCCTTTGATTTCCCTGGACTCCGTAGCGATATCGATGCCATTGAACAGAGTCTCTTTGGTAGCATGAAGGGGTTCTTTGAAGCAGCTGAAGAGATTAAGAATGGTTTCTTTGGTTCTTTAAGAGATCCACCCCTATTCAATAGAGATTCTTCCTCTCCCGGATCGATGAGACGTGGTATACCGATTGAAGATCATGATCCAGAGTTCTTCTCCAACCCAAAAGAGCCCGATTCTGGTCACGTTGACCTATCTGGATTGGCCAGGGATGTCTAA

Protein sequence

MKPTTLCDSLLENNEEDFVVPRSLEEELVLQSNLIMTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKPEHTSWQAYLKYWPRNMNQCSLLEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTKPLTAKNNEEDFVVPRSLEEELVLQRPTEVIQSNKEFTEEDVTDQMVNRSFPLGSSEHRPFDFPGLRSDIDAIEQSLFGSMKGFFEAAEEIKNGFFGSLRDPPLFNRDSSSPGSMRRGIPIEDHDPEFFSNPKEPDSGHVDLSGLARDV

Homology

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BLAST of IVF0026271 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 743.4 bits (1918), Expect = 4.9e-213
Identity = 452/1260 (35.87%), Postives = 688/1260 (54.60%), Query Frame = 0


Query: 142  KYIYNARMNEGASVREH--VLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSN 201
            K +Y   M+EG +   H  V N ++   +A + G  I+E  +   +L SLP S+    + 
Sbjct: 105  KQLYALHMSEGTNFLSHLNVFNGLI-TQLANL-GVKIEEEDKAILLLNSLPSSYDNLATT 164

Query: 202  AVMNKIAYTLTTLLNELQTFESLMKIKGQKGEANVATST-RKFHRGSTSGTKSMPSSSGN 261
             +  K    L  + + L   E + K    +G+A +     R + R S +  +S       
Sbjct: 165  ILHGKTTIELKDVTSALLLNEKMRKKPENQGQALITEGRGRSYQRSSNNYGRS------- 224

Query: 262  KKWKKKKGGQGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKY 321
                   G +G        K+  ++K+    C++CNQ GH+KR+CP     K +    K 
Sbjct: 225  -------GARG--------KSKNRSKSRVRNCYNCNQPGHFKRDCPNPRKGKGETSGQKN 284

Query: 322  D-------------LLVL---ETCL-VENDDSAWIIDSGATNHVCSSFQGISSWRQLETG 381
            D             +L +   E C+ +   +S W++D+ A++H          +   + G
Sbjct: 285  DDNTAAMVQNNDNVVLFINEEEECMHLSGPESEWVVDTAASHHATPVRDLFCRYVAGDFG 344

Query: 382  EMTMRVGTGHVVSAIAVGGLRLCLQKSF---LLLENVYVVPDLKRNLISVKCLLEQSYSL 441
              T+++G         +G   +C++ +    L+L++V  VPDL+ NLIS   L    Y  
Sbjct: 345  --TVKMGNTSYSKIAGIGD--ICIKTNVGCTLVLKDVRHVPDLRMNLISGIALDRDGYES 404

Query: 442  TFNVNKVFIYKNGVEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENA 501
             F   K  + K  + I        LY   +   +  LN    + ++              
Sbjct: 405  YFANQKWRLTKGSLVIAKGVARGTLYRTNAEICQGELNAAQDEISV-------------- 464

Query: 502  HLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLE 561
             LWH R+GH++   ++ L K  L+S  +  ++  C+ CL GK  +  F     R    L+
Sbjct: 465  DLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERKLNILD 524

Query: 562  LVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSK 621
            LV+SD+CGPM +++ GG +YF+TF DD SR  +VY+++ K +  + F+++ A VE    +
Sbjct: 525  LVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGR 584

Query: 622  TIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSY 681
             +K  RSD GGEY   +F+ Y    GI  + + PGTPQ NGV+ER NRT+++ VRSM+  
Sbjct: 585  KLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRM 644

Query: 682  AHLPNSFWGYAVQTAVYILNCVPSKSVS-ETPLKLWNGRKGSLRHFRIWGCP--AHVLEN 741
            A LP SFWG AVQTA Y++N  PS  ++ E P ++W  ++ S  H +++GC   AHV + 
Sbjct: 645  AKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKE 704

Query: 742  NPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLN 801
               KL+ +S  C+F+GY     G   +DP   KV  S +  F  E  +R     S+ V N
Sbjct: 705  QRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVF-RESEVRTAADMSEKVKN 764

Query: 802  EL----------------SKETTEPSTRVVEEP-----------SALTRVVHVGSSTRTH 861
             +                ++ TT+  +   E+P             +  V H       H
Sbjct: 765  GIIPNFVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPTQGEEQH 824

Query: 862  QPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNL 921
            QP      RRS R      RY S TE + +  D    +P + K+ +   +K++ +KAM  
Sbjct: 825  QPL-----RRSERPRVESRRYPS-TEYVLISDD---REPESLKEVLSHPEKNQLMKAMQE 884

Query: 922  ELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYE 981
            E+ES+  N  + LV+ P G +P+ CKW++K K+  D K+  +KARLV KG+ Q +G+D++
Sbjct: 885  EMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFD 944

Query: 982  ETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQK 1041
            E FSPV  + SIR +LS+AA  D E+ Q+DVKTAFL+G+LEE IYM+QPEGF + G++  
Sbjct: 945  EIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHM 1004

Query: 1042 ICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVY-KRIINKSVAFLVLYVDDI 1101
            +CKLN+S+YGLKQA R W ++FD+ +KS  + +   +PCVY KR    +   L+LYVDD+
Sbjct: 1005 VCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDM 1064

Query: 1102 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1161
            L++G D GL+  +K  L+  F MKDLG AQ +LG++I R+R ++ L LSQ  YI++++ +
Sbjct: 1065 LIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLER 1124

Query: 1162 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1221
            ++M+N+K    P    + LSK+ CP T ++   M  +PY+SAVGSLMYAM+CTRPDI +A
Sbjct: 1125 FNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHA 1184

Query: 1222 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1281
            VG+VSR+  NPG  HW AVK IL+YLR T    L +G  D IL GYTD+D   D D+RKS
Sbjct: 1185 VGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPILKGYTDADMAGDIDNRKS 1244

Query: 1282 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1341
            ++G +FT +GGA+ W+S  Q C+A ST EAEY+AA E  KE +WL+ FL +L +     K
Sbjct: 1245 STGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGL---HQK 1304

Query: 1342 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1348
               +YCD+  A+  S+    H R KHI+ +YH IRE+V    + V +I++  N AD  TK
Sbjct: 1305 EYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTK 1309

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BLAST of IVF0026271 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 524.2 bits (1349), Expect = 4.7e-147
Identity = 418/1446 (28.91%), Postives = 676/1446 (46.75%), Query Frame = 0


Query: 50   NGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKPEHTSW 109
            +G  YA WK  I  +L   D+  V+    P            E  + W KA    + T  
Sbjct: 12   DGEKYAIWKFRIRALLAEQDVLKVVDGLMP-----------NEVDDSWKKAERCAKSTII 71

Query: 110  Q----AYLKYWPRNMNQCSLLEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVH 169
            +    ++L +   ++    +LE    A Y+ K  A +     R+       E  ++++ H
Sbjct: 72   EYLSDSFLNFATSDITARQILENL-DAVYERKSLASQLALRKRLLSLKLSSE--MSLLSH 131

Query: 170  FNVAE-------MNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQT 229
            F++ +         GA I+E  ++S +L +LP  +      A+       LT    + + 
Sbjct: 132  FHIFDELISELLAAGAKIEEMDKISHLLITLPSCY-DGIITAIETLSEENLTLAFVKNRL 191

Query: 230  FESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAK 289
             +  +KIK    + +        H  + +   ++     N+  K KK  +GN        
Sbjct: 192  LDQEIKIKNDHNDTSKKVMNAIVHNNNNTYKNNL---FKNRVTKPKKIFKGN-------- 251

Query: 290  TTKKTKAAKGICFHCNQEGHWKRNCPKY---LAEKKKAKQGKYDL-----LVLETCLVEN 349
            +  K K     C HC +EGH K++C  Y   L  K K  + +        +      V N
Sbjct: 252  SKYKVK-----CHHCGREGHIKKDCFHYKRILNNKNKENEKQVQTATSHGIAFMVKEVNN 311

Query: 350  ----DDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQ 409
                D+  +++DSGA++H+ +     +   ++           G  + A   G +RL   
Sbjct: 312  TSVMDNCGFVLDSGASDHLINDESLYTDSVEVVPPLKIAVAKQGEFIYATKRGIVRL-RN 371

Query: 410  KSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEIC-SAKLENNLYV 469
               + LE+V    +   NL+SVK L E   S+ F+ + V I KNG+ +  ++ + NN+ V
Sbjct: 372  DHEITLEDVLFCKEAAGNLMSVKRLQEAGMSIEFDKSGVTISKNGLMVVKNSGMLNNVPV 431

Query: 470  LRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSEL 529
            +                   Q   +    K N  LWH R GHI+  ++  + +  + S+ 
Sbjct: 432  IN-----------------FQAYSINAKHKNNFRLWHERFGHISDGKLLEIKRKNMFSDQ 491

Query: 530  E-----ENSLPVCESCLEGKMTKRPF---TGKGHRAKEPLELVHSDLCGPMNVKARGGFE 589
                  E S  +CE CL GK  + PF     K H  K PL +VHSD+CGP+         
Sbjct: 492  SLLNNLELSCEICEPCLNGKQARLPFKQLKDKTH-IKRPLFVVHSDVCGPITPVTLDDKN 551

Query: 590  YFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQ 649
            YF+ F D ++ Y   YL+++KS+    F+++ A+ E   +  +     D G EY+  + +
Sbjct: 552  YFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMR 611

Query: 650  NYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYIL 709
             + ++ GI   L+ P TPQ NGVSER  RT+ +  R+M+S A L  SFWG AV TA Y++
Sbjct: 612  QFCVKKGISYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLI 671

Query: 710  NCVPSKSV---SETPLKLWNGRKGSLRHFRIWGCPAHV-LENNPKKLEPRSKLCLFVGY- 769
            N +PS+++   S+TP ++W+ +K  L+H R++G   +V ++N   K + +S   +FVGY 
Sbjct: 672  NRIPSRALVDSSKTPYEMWHNKKPYLKHLRVFGATVYVHIKNKQGKFDDKSFKSIFVGYE 731

Query: 770  PKG--------------------------TRGGYFYD--------------PKDNKVFVS 829
            P G                          +R   F                P D++  + 
Sbjct: 732  PNGFKLWDAVNEKFIVARDVVVDETNMVNSRAVKFETVFLKDSKESENKNFPNDSRKIIQ 791

Query: 830  T----------NATFLEEDHIREHK----PRSKIVLNELS------------KETTEPST 889
            T          N  FL++    E+K       KI+  E              K++ E + 
Sbjct: 792  TEFPNESKECDNIQFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESNK 851

Query: 890  RVVEEPSALTRVVHVGSSTRTHQPQSLREP------------------------RRSGRV 949
              + E     R  H+  S  +  P   RE                         RRS R+
Sbjct: 852  YFLNESKKRKRDDHLNESKGSGNPNESRESETAEHLKEIGIDNPTKNDGIEIINRRSERL 911

Query: 950  TNLP-IRYMSLTETL--TVISDGDI--EDPLTFKKAMEDVDKDEWIKAMNLELESMYFNS 1009
               P I Y     +L   V++   I  + P +F +     DK  W +A+N EL +   N+
Sbjct: 912  KTKPQISYNEEDNSLNKVVLNAHTIFNDVPNSFDEIQYRDDKSSWEEAINTELNAHKINN 971

Query: 1010 VWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAML 1069
             W +  +P+    +  +W++  K    G    +KARLVA+G+TQ   +DYEETF+PVA +
Sbjct: 972  TWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARI 1031

Query: 1070 KSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIY 1129
             S R +LS+   ++ ++ QMDVKTAFLNG L+E IYM+ P+G  I      +CKLN++IY
Sbjct: 1032 SSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQG--ISCNSDNVCKLNKAIY 1091

Query: 1130 GLKQASRSWNIRFDTAIKSYGFDQIVDEPCVY---KRIINKSVAFLVLYVDDILLIGNDI 1189
            GLKQA+R W   F+ A+K   F     + C+Y   K  IN+++ +++LYVDD+++   D+
Sbjct: 1092 GLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENI-YVLLYVDDVVIATGDM 1151

Query: 1190 GLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSK 1249
              + + K++L  +F+M DL E +  +GI+I  + +   + LSQ++Y+ KI+ K++M+N  
Sbjct: 1152 TRMNNFKRYLMEKFRMTDLNEIKHFIGIRI--EMQEDKIYLSQSAYVKKILSKFNMENCN 1211

Query: 1250 RGLLP----FRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGI 1309
                P      + +  S E C           + P  S +G LMY MLCTRPD+  AV I
Sbjct: 1212 AVSTPLPSKINYELLNSDEDC-----------NTPCRSLIGCLMYIMLCTRPDLTTAVNI 1271

Query: 1310 VSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLI----LTGYTDSDFQTDRDSRK 1352
            +SRY S      W  +K +L+YL+ T D  L++  K+L     + GY DSD+      RK
Sbjct: 1272 LSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIF-KKNLAFENKIIGYVDSDWAGSEIDRK 1331

[Close]

BLAST of IVF0026271 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 2.0e-129
Identity = 400/1496 (26.74%), Postives = 642/1496 (42.91%), Query Frame = 0


Query: 26   EELVLQSNLIMTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPA-- 85
            EELVL +  I+    +NM    KL   NY  W   ++ +    +L   L       PA  
Sbjct: 6    EELVLNNTSIL---NVNMSNVTKLTSTNYLMWSRQVHALFDGYELAGFLDGSTTMPPATI 65

Query: 86   -ANATRTVREPYERWAKANE--------------KPEHTSWQAYLKYWPRNMNQCSLLEM 145
              +A   V   Y RW + ++              +P  +      + W       +L ++
Sbjct: 66   GTDAAPRVNPDYTRWKRQDKLIYSAVLGAISMSVQPAVSRATTAAQIWE------TLRKI 125

Query: 146  FGQASY----QIKHDALKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSF 205
            +   SY    Q++    ++    +     ++ +++  ++  F+   + G  +D   QV  
Sbjct: 126  YANPSYGHVTQLRTQLKQWTKGTK-----TIDDYMQGLVTRFDQLALLGKPMDHDEQVER 185

Query: 206  ILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRG 265
            +LE+LPE +              TLT +   L   ES  KI        +  +       
Sbjct: 186  VLENLPEEYKPVIDQIAAKDTPPTLTEIHERLLNHES--KILAVSSATVIPITANAVSHR 245

Query: 266  STSGTKSMPSSSGNKKWKKKKGGQGNK----ANLAAAKTTKKTKAAKGICFHCNQEGHWK 325
            +T+ T +  + + N ++  +     +K    ++        ++K   G C  C  +GH  
Sbjct: 246  NTTTTNNNNNGNRNNRYDNRNNNNNSKPWQQSSTNFHPNNNQSKPYLGKCQICGVQGHSA 305

Query: 326  RNCP--KYLAEKKKAKQGKYDL--------LVLETCLVENDDSAWIIDSGATNHVCSSFQ 385
            + C   ++      ++Q             L L +    N+   W++DSGAT+H+ S F 
Sbjct: 306  KRCSQLQHFLSSVNSQQPPSPFTPWQPRANLALGSPYSSNN---WLLDSGATHHITSDFN 365

Query: 386  GISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKC 445
             + S  Q  TG   + V  G  +     G   L  +   L L N+  VP++ +NLISV  
Sbjct: 366  NL-SLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKSRPLNLHNILYVPNIHKNLISVYR 425

Query: 446  LLE------QSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLRSLTSKALLNTEMFKTAI 505
            L        + +  +F V  +     GV +   K ++ LY               +  A 
Sbjct: 426  LCNANGVSVEFFPASFQVKDL---NTGVPLLQGKTKDELY--------------EWPIAS 485

Query: 506  TQNKRLKISPKENA--HLWHLRLGHINLNRIERLVKNGLLSELE-ENSLPVCESCLEGKM 565
            +Q   L  SP   A    WH RLGH   + +  ++ N  LS L   +    C  CL  K 
Sbjct: 486  SQPVSLFASPSSKATHSSWHARLGHPAPSILNSVISNYSLSVLNPSHKFLSCSDCLINKS 545

Query: 566  TKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEA 625
             K PF+     +  PLE ++SD+     + +   + Y++ F D ++RY ++Y ++ KS+ 
Sbjct: 546  NKVPFSQSTINSTRPLEYIYSDVWS-SPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQV 605

Query: 626  LEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVS 685
             E F  +K  +EN     I TF SD GGE++ L    Y  + GI    S P TP+ NG+S
Sbjct: 606  KETFITFKNLLENRFQTRIGTFYSDNGGEFVAL--WEYFSQHGISHLTSPPHTPEHNGLS 665

Query: 686  ERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVS-ETPLKLWNGRKGSL 745
            ER++R +++   +++S+A +P ++W YA   AVY++N +P+  +  E+P +   G   + 
Sbjct: 666  ERKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNY 725

Query: 746  RHFRIWGCPAH--VLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFL 805
               R++GC  +  +   N  KL+ +S+ C+F+GY            + +++++S +  F 
Sbjct: 726  DKLRVFGCACYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYISRHVRFD 785

Query: 806  EE-----------DHIREHKPRSKIVLNELSKETTEPSTRVV----------------EE 865
            E              ++E +  S  V    S  TT P+   V                  
Sbjct: 786  ENCFPFSNYLATLSPVQEQRRESSCV---WSPHTTLPTRTPVLPAPSCSDPHHAATPPSS 845

Query: 866  PSALTRVVHVGSS----------------------------------TRTHQ-------- 925
            PSA  R   V SS                                  T+TH         
Sbjct: 846  PSAPFRNSQVSSSNLDSSFSSSFPSSPEPTAPRQNGPQPTTQPTQTQTQTHSSQNTSQNN 905

Query: 926  ---------PQSLREPRRSGRVTNLPIRYMSLTET--------------LTVISDGDIED 985
                      QSL  P +S   +  P    S + T              L  I + + + 
Sbjct: 906  PTNESPSQLAQSLSTPAQSSSSSPSPTTSASSSSTSPTPPSILIHPPPPLAQIVNNNNQA 965

Query: 986  PLTF------------------------------KKAMEDVDKDEWIKAMNLELESMYFN 1045
            PL                                + A++ +  + W  AM  E+ +   N
Sbjct: 966  PLNTHSMGTRAKAGIIKPNPKYSLAVSLAAESEPRTAIQALKDERWRNAMGSEINAQIGN 1025

Query: 1046 SVWDLVDQPDG-VKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVA 1105
              WDLV  P   V  +GC+WI+ +K  +DG +  +KARLVAKGY Q  G+DY ETFSPV 
Sbjct: 1026 HTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVI 1085

Query: 1106 MLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRS 1165
               SIRI+L +A    + I Q+DV  AFL G L + +YM QP GFI   +   +CKL ++
Sbjct: 1086 KSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKA 1145

Query: 1166 IYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIG 1225
            +YGLKQA R+W +     + + GF   V +  ++     KS+ ++++YVDDIL+ GND  
Sbjct: 1146 LYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPT 1205

Query: 1226 LLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKR 1285
            LL +    L+ +F +KD  E  + LGI+    R    L LSQ  YI  ++ + +M  +K 
Sbjct: 1206 LLHNTLDNLSQRFSVKDHEELHYFLGIE--AKRVPTGLHLSQRRYILDLLARTNMITAKP 1265

Query: 1286 GLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQ 1345
               P      LS     K     E      Y   VGSL Y +  TRPDI YAV  +S++ 
Sbjct: 1266 VTTPMAPSPKLSLYSGTKLTDPTE------YRGIVGSLQY-LAFTRPDISYAVNRLSQFM 1325

Query: 1346 SNPGLAHWTAVKTILKYLRRTRDYTL-VYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFT 1351
              P   H  A+K IL+YL  T ++ + +     L L  Y+D+D+  D+D   ST+G +  
Sbjct: 1326 HMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVY 1385

[Close]

BLAST of IVF0026271 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 463.0 bits (1190), Expect = 1.3e-128
Identity = 394/1485 (26.53%), Postives = 634/1485 (42.69%), Query Frame = 0


Query: 26   EELVLQSNLIMTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAAN 85
            EE+VL +  I+    +NM    KL   NY  W   ++ +    +L   L    P  PA  
Sbjct: 6    EEIVLVNTNIL---NVNMSNVTKLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPATI 65

Query: 86   ATRTVREPYERWAKANEKPEHTSWQAYLKYWPRNMNQCSLLEMFGQASYQIKHDALKYIY 145
             T  V             P++T W        R  ++     + G  S  ++    +   
Sbjct: 66   GTDAV---------PRVNPDYTRW--------RRQDKLIYSAILGAISMSVQPAVSRATT 125

Query: 146  NARMNEGASVRE--------HV--LNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQ 205
             A++ E  ++R+        HV  L  +  F+   + G  +D   QV  +LE+LP+ +  
Sbjct: 126  AAQIWE--TLRKIYANPSYGHVTQLRFITRFDQLALLGKPMDHDEQVERVLENLPDDYKP 185

Query: 206  FRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSS 265
                        +LT +   L   ES +          +  +       +T+  ++    
Sbjct: 186  VIDQIAAKDTPPSLTEIHERLINRESKLLALNSAEVVPITANVVTHRNTNTNRNQNNRGD 245

Query: 266  SGNKKWKKKKGGQGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAK- 325
            + N      +      ++  +    ++ K   G C  C+ +GH  + CP+    +     
Sbjct: 246  NRNYNNNNNRSNSWQPSSSGSRSDNRQPKPYLGRCQICSVQGHSAKRCPQLHQFQSTTNQ 305

Query: 326  ----------QGKYDLLVLETCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMT 385
                      Q + +L V       N    W++DSGAT+H+ S F  + S+ Q  TG   
Sbjct: 306  QQSTSPFTPWQPRANLAVNSPYNANN----WLLDSGATHHITSDFNNL-SFHQPYTGGDD 365

Query: 386  MRVGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLE------QSYSL 445
            + +  G  +     G   L      L L  V  VP++ +NLISV  L        + +  
Sbjct: 366  VMIADGSTIPITHTGSASLPTSSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVSVEFFPA 425

Query: 446  TFNVNKVFIYKNGVEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENA 505
            +F V  +     GV +   K ++ LY     +S+A+    MF +  +         K   
Sbjct: 426  SFQVKDL---NTGVPLLQGKTKDELYEWPIASSQAV---SMFASPCS---------KATH 485

Query: 506  HLWHLRLGHINLNRIERLVKNGLLSELE-ENSLPVCESCLEGKMTKRPFTGKGHRAKEPL 565
              WH RLGH +L  +  ++ N  L  L   + L  C  C   K  K PF+     + +PL
Sbjct: 486  SSWHSRLGHPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPL 545

Query: 566  ELVHSDLCGPMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALS 625
            E ++SD+     + +   + Y++ F D ++RY ++Y ++ KS+  + F  +K+ VEN   
Sbjct: 546  EYIYSDVWS-SPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQ 605

Query: 626  KTIKTFRSDRGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMS 685
              I T  SD GGE++ L+  +YL + GI    S P TP+ NG+SER++R +++M  +++S
Sbjct: 606  TRIGTLYSDNGGEFVVLR--DYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLS 665

Query: 686  YAHLPNSFWGYAVQTAVYILNCVPSKSVS-ETPLKLWNGRKGSLRHFRIWGCPAH--VLE 745
            +A +P ++W YA   AVY++N +P+  +  ++P +   G+  +    +++GC  +  +  
Sbjct: 666  HASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRP 725

Query: 746  NNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEE---------DHIRE 805
             N  KLE +SK C F+GY               +++ S +  F E               
Sbjct: 726  YNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGVSTS 785

Query: 806  HKPRSKIVLNELSKETTEPSTRVV------------------EEPSAL------------ 865
             + RS    N  S  TT P+T +V                    PS L            
Sbjct: 786  QEQRSDSAPNWPS-HTTLPTTPLVLPAPPCLGPHLDTSPRPPSSPSPLCTTQVSSSNLPS 845

Query: 866  -----------TRVVHVG--SSTRTHQPQ-----------------SLREPRRSGRVTNL 925
                       T   H G   + + HQ Q                 S   P ++  +   
Sbjct: 846  SSISSPSSSEPTAPSHNGPQPTAQPHQTQNSNSNSPILNNPNPNSPSPNSPNQNSPLPQS 905

Query: 926  PIRYMSLTETLTVISDGDI----------------------------------------- 985
            PI    +    T IS+ +                                          
Sbjct: 906  PISSPHIPTPSTSISEPNSPSSSSTSTPPLPPVLPAPPIIQVNAQAPVNTHSMATRAKDG 965

Query: 986  -----------------EDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLV-DQPD 1045
                              +P T  +AM+D   D W +AM  E+ +   N  WDLV   P 
Sbjct: 966  IRKPNQKYSYATSLAANSEPRTAIQAMKD---DRWRQAMGSEINAQIGNHTWDLVPPPPP 1025

Query: 1046 GVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSI 1105
             V  +GC+WI+ +K  +DG +  +KARLVAKGY Q  G+DY ETFSPV    SIRI+L +
Sbjct: 1026 SVTIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGV 1085

Query: 1106 AAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSW 1165
            A    + I Q+DV  AFL G L + +YM QP GF+   +   +C+L ++IYGLKQA R+W
Sbjct: 1086 AVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAW 1145

Query: 1166 NIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLAT 1225
             +   T + + GF   + +  ++     +S+ ++++YVDDIL+ GND  LL      L+ 
Sbjct: 1146 YVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQ 1205

Query: 1226 QFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTL 1285
            +F +K+  +  + LGI+    R  + L LSQ  Y   ++ + +M  +K    P      L
Sbjct: 1206 RFSVKEHEDLHYFLGIE--AKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKL 1265

Query: 1286 SKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAV 1345
            +     K P   E      Y   VGSL Y +  TRPD+ YAV  +S+Y   P   HW A+
Sbjct: 1266 TLHSGTKLPDPTE------YRGIVGSLQY-LAFTRPDLSYAVNRLSQYMHMPTDDHWNAL 1325

Query: 1346 KTILKYLRRTRDYTL-VYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSI 1351
            K +L+YL  T D+ + +     L L  Y+D+D+  D D   ST+G +  L    + W S 
Sbjct: 1326 KRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSK 1385

[Close]

BLAST of IVF0026271 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 159.1 bits (401), Expect = 4.0e-37
Identity = 106/314 (33.76%), Postives = 150/314 (47.77%), Query Frame = 0


Query: 957  MDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKS 1016
            MDV TAFLN  ++E IY++QP GF+       + +L   +YGLKQA   WN   +  +K 
Sbjct: 1    MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 1017 YGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEA 1076
             GF +   E  +Y R  +    ++ +YVDD+L+      +   +KQ L   + MKDLG+ 
Sbjct: 61   IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120

Query: 1077 QFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQ 1136
               LG+ I +   N  + LS   YI K   +  +   K    P  +   L +   P   +
Sbjct: 121  DKFLGLNIHQS-SNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHL-K 180

Query: 1137 DVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRT 1196
            D+      PY S VG L++     RPDI Y V ++SR+   P   H  + + +L+YL  T
Sbjct: 181  DI-----TPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTT 240

Query: 1197 RDYTLVYGS-KDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIK-QGCIADST 1256
            R   L Y S   L LT Y D+      D   ST G V  L G  V W S K +G I   +
Sbjct: 241  RSMCLKYRSGSQLALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPS 300

Query: 1257 MEAEYVAACEAAKE 1269
             EAEY+ A E   E
Sbjct: 301  TEAEYITASETVME 307

[Close]

BLAST of IVF0026271 vs. ExPASy TrEMBL
Match: A0A5D3CSZ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00320 PE=4 SV=1)

HSP 1 Score: 2586.2 bits (6702), Expect = 0.0e+00
Identity = 1320/1418 (93.09%), Postives = 1322/1418 (93.23%), Query Frame = 0


Query: 36   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 95
            MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 96   RWAKANEKPEH---TSWQAYLKYWPRNMNQC-----SLLEMFGQASYQIKHDALKYIYNA 155
            RWAKANEK       S    L     +M        SL EMFGQASYQIKHDALKYIYNA
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 156  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 215
            RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 216  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 275
            TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 276  QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 335
            QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Sbjct: 241  QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

Query: 336  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 395
            VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK
Sbjct: 301  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360

Query: 396  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 455
            SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR
Sbjct: 361  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420

Query: 456  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 515
            SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE
Sbjct: 421  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480

Query: 516  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 575
            NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS
Sbjct: 481  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540

Query: 576  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 635
            RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
Sbjct: 541  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600

Query: 636  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 695
            QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE
Sbjct: 601  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660

Query: 696  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 755
            TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN
Sbjct: 661  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720

Query: 756  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 815
            KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT
Sbjct: 721  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780

Query: 816  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 875
            HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN
Sbjct: 781  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840

Query: 876  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 935
            LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY
Sbjct: 841  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900

Query: 936  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 995
            EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ
Sbjct: 901  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960

Query: 996  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1055
            KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI
Sbjct: 961  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020

Query: 1056 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1115
            LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK
Sbjct: 1021 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080

Query: 1116 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1175
            YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA
Sbjct: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140

Query: 1176 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1235
            VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS
Sbjct: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1200

Query: 1236 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1295
            TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK
Sbjct: 1201 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1260

Query: 1296 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1355
            PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK
Sbjct: 1261 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1320

Query: 1356 PLTAK------------------------------------------------------- 1376
            PLTAK                                                       
Sbjct: 1321 PLTAKPTQYAYHFGDSSDWGAGNAATQEGIHSFSIDGQKTILRSLCIPTKQNPLKSFFPH 1380

[Close]

BLAST of IVF0026271 vs. ExPASy TrEMBL
Match: A0A5A7UGV2 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G002690 PE=4 SV=1)

HSP 1 Score: 2584.3 bits (6697), Expect = 0.0e+00
Identity = 1319/1418 (93.02%), Postives = 1321/1418 (93.16%), Query Frame = 0


Query: 36   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 95
            MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 96   RWAKANEKPEH---TSWQAYLKYWPRNMNQC-----SLLEMFGQASYQIKHDALKYIYNA 155
            RWAKANEK       S    L     +M        SL EMFGQASYQIKHDALKYIYNA
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 156  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 215
            RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 216  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 275
            TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 276  QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 335
            QGNKANLAAAKTTKK KAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Sbjct: 241  QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

Query: 336  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 395
            VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK
Sbjct: 301  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360

Query: 396  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 455
            SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR
Sbjct: 361  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420

Query: 456  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 515
            SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE
Sbjct: 421  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480

Query: 516  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 575
            NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS
Sbjct: 481  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540

Query: 576  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 635
            RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
Sbjct: 541  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600

Query: 636  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 695
            QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE
Sbjct: 601  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660

Query: 696  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 755
            TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN
Sbjct: 661  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720

Query: 756  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 815
            KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT
Sbjct: 721  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780

Query: 816  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 875
            HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN
Sbjct: 781  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840

Query: 876  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 935
            LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY
Sbjct: 841  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900

Query: 936  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 995
            EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ
Sbjct: 901  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960

Query: 996  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1055
            KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI
Sbjct: 961  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020

Query: 1056 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1115
            LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK
Sbjct: 1021 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080

Query: 1116 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1175
            YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA
Sbjct: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140

Query: 1176 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1235
            VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS
Sbjct: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1200

Query: 1236 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1295
            TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK
Sbjct: 1201 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1260

Query: 1296 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1355
            PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK
Sbjct: 1261 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1320

Query: 1356 PLTAK------------------------------------------------------- 1376
            PLTAK                                                       
Sbjct: 1321 PLTAKPTQYAYHFGDSSDWGAGNAATQEGIHSFSIDGQKTILRSLCIPTKQNPLKSFFPH 1380

[Close]

BLAST of IVF0026271 vs. ExPASy TrEMBL
Match: A0A5D3CPJ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00040 PE=4 SV=1)

HSP 1 Score: 2580.1 bits (6686), Expect = 0.0e+00
Identity = 1299/1325 (98.04%), Postives = 1300/1325 (98.11%), Query Frame = 0


Query: 36   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 95
            MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 96   RWAKANEKPEH---TSWQAYLKYWPRNMNQC-----SLLEMFGQASYQIKHDALKYIYNA 155
            RWAKANEK       S    L     +M        SL EMFGQASYQIKHDALKYIYNA
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 156  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 215
            RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 216  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 275
            TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 276  QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 335
            QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Sbjct: 241  QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

Query: 336  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 395
            VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK
Sbjct: 301  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360

Query: 396  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 455
            SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR
Sbjct: 361  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420

Query: 456  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 515
            SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE
Sbjct: 421  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480

Query: 516  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 575
            NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS
Sbjct: 481  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540

Query: 576  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 635
            RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
Sbjct: 541  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600

Query: 636  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 695
            QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE
Sbjct: 601  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660

Query: 696  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 755
            TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN
Sbjct: 661  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720

Query: 756  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 815
            KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT
Sbjct: 721  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780

Query: 816  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 875
            HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN
Sbjct: 781  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840

Query: 876  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 935
            LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY
Sbjct: 841  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900

Query: 936  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 995
            EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ
Sbjct: 901  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960

Query: 996  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1055
            KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI
Sbjct: 961  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020

Query: 1056 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1115
            LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK
Sbjct: 1021 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080

Query: 1116 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1175
            YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA
Sbjct: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140

Query: 1176 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1235
            VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS
Sbjct: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1200

Query: 1236 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1295
            TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK
Sbjct: 1201 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1260

Query: 1296 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1353
            PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK
Sbjct: 1261 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1320

[Close]

BLAST of IVF0026271 vs. ExPASy TrEMBL
Match: A0A5A7SMH8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002560 PE=4 SV=1)

HSP 1 Score: 2578.1 bits (6681), Expect = 0.0e+00
Identity = 1298/1325 (97.96%), Postives = 1299/1325 (98.04%), Query Frame = 0


Query: 36   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 95
            MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 96   RWAKANEKPEH---TSWQAYLKYWPRNMNQC-----SLLEMFGQASYQIKHDALKYIYNA 155
            RWAKANEK       S    L     +M        SL EMFGQASYQIKHDALKYIYNA
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 156  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 215
            RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 216  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 275
            TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 276  QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 335
            QGNKANLAAAKTTKK KAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Sbjct: 241  QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

Query: 336  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 395
            VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK
Sbjct: 301  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360

Query: 396  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 455
            SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR
Sbjct: 361  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420

Query: 456  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 515
            SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE
Sbjct: 421  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480

Query: 516  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 575
            NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS
Sbjct: 481  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540

Query: 576  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 635
            RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
Sbjct: 541  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600

Query: 636  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 695
            QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE
Sbjct: 601  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660

Query: 696  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 755
            TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN
Sbjct: 661  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720

Query: 756  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 815
            KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT
Sbjct: 721  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780

Query: 816  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 875
            HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN
Sbjct: 781  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840

Query: 876  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 935
            LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY
Sbjct: 841  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900

Query: 936  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 995
            EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ
Sbjct: 901  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960

Query: 996  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1055
            KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI
Sbjct: 961  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020

Query: 1056 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1115
            LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK
Sbjct: 1021 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080

Query: 1116 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1175
            YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA
Sbjct: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140

Query: 1176 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1235
            VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS
Sbjct: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1200

Query: 1236 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1295
            TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK
Sbjct: 1201 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1260

Query: 1296 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1353
            PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK
Sbjct: 1261 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1320

[Close]

BLAST of IVF0026271 vs. ExPASy TrEMBL
Match: A0A5A7TWB9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G00310 PE=4 SV=1)

HSP 1 Score: 2573.5 bits (6669), Expect = 0.0e+00
Identity = 1296/1325 (97.81%), Postives = 1297/1325 (97.89%), Query Frame = 0


Query: 36   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 95
            MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 96   RWAKANEKPEH---TSWQAYLKYWPRNMNQC-----SLLEMFGQASYQIKHDALKYIYNA 155
            RWAKANEK       S    L     +M        SL EMFGQASYQIKHDALKYIYNA
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 156  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 215
            RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 216  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 275
            TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 276  QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 335
            QGNKANLAAAKTTKK KAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Sbjct: 241  QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

Query: 336  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 395
            VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK
Sbjct: 301  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360

Query: 396  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 455
            SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR
Sbjct: 361  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420

Query: 456  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 515
            SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE
Sbjct: 421  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480

Query: 516  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 575
            NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS
Sbjct: 481  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540

Query: 576  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 635
            RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
Sbjct: 541  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600

Query: 636  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 695
            QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE
Sbjct: 601  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660

Query: 696  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 755
            TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN
Sbjct: 661  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720

Query: 756  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 815
            KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT
Sbjct: 721  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780

Query: 816  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 875
            HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN
Sbjct: 781  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840

Query: 876  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 935
            LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY
Sbjct: 841  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900

Query: 936  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 995
            EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ
Sbjct: 901  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960

Query: 996  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1055
            KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI
Sbjct: 961  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020

Query: 1056 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1115
            LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK
Sbjct: 1021 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080

Query: 1116 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1175
            YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA
Sbjct: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140

Query: 1176 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1235
            VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDY LVYGSKDLILTGYTDSDFQTDRDSRKS
Sbjct: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYMLVYGSKDLILTGYTDSDFQTDRDSRKS 1200

Query: 1236 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1295
            TSGSVF LNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK
Sbjct: 1201 TSGSVFILNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1260

Query: 1296 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1353
            PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK
Sbjct: 1261 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1320

[Close]

BLAST of IVF0026271 vs. NCBI nr
Match: TYK14550.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2581 bits (6689), Expect = 0.0
Identity = 1320/1417 (93.15%), Postives = 1321/1417 (93.23%), Query Frame = 0


Query: 36   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 95
            MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 96   RWAKANEKPEH---TSWQAYLKYWPRNMNQC-----SLLEMFGQASYQIKHDALKYIYNA 155
            RWAKANEK       S    L     +M        SL EMFGQASYQIKHDALKYIYNA
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 156  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 215
            RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 216  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 275
            TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 276  QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 335
            QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Sbjct: 241  QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

Query: 336  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 395
            VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK
Sbjct: 301  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360

Query: 396  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 455
            SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR
Sbjct: 361  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420

Query: 456  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 515
            SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE
Sbjct: 421  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480

Query: 516  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 575
            NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS
Sbjct: 481  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540

Query: 576  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 635
            RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
Sbjct: 541  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600

Query: 636  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 695
            QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE
Sbjct: 601  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660

Query: 696  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 755
            TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN
Sbjct: 661  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720

Query: 756  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 815
            KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT
Sbjct: 721  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780

Query: 816  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 875
            HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN
Sbjct: 781  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840

Query: 876  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 935
            LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY
Sbjct: 841  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900

Query: 936  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 995
            EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ
Sbjct: 901  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960

Query: 996  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1055
            KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI
Sbjct: 961  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020

Query: 1056 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1115
            LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK
Sbjct: 1021 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080

Query: 1116 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1175
            YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA
Sbjct: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140

Query: 1176 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1235
            VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS
Sbjct: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1200

Query: 1236 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1295
            TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK
Sbjct: 1201 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1260

Query: 1296 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1355
            PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK
Sbjct: 1261 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1320

Query: 1356 PLTAK------------------------------------------------------- 1374
            PLTAK                                                       
Sbjct: 1321 PLTAKPTQYAYHFGDSSDWGAGNAATQEGIHSFSIDGQKTILRSLCIPTKQNPLKSFFPH 1380

[Close]

BLAST of IVF0026271 vs. NCBI nr
Match: KAA0054490.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2579 bits (6684), Expect = 0.0
Identity = 1319/1417 (93.08%), Postives = 1320/1417 (93.15%), Query Frame = 0


Query: 36   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 95
            MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 96   RWAKANEKPEH---TSWQAYLKYWPRNMNQC-----SLLEMFGQASYQIKHDALKYIYNA 155
            RWAKANEK       S    L     +M        SL EMFGQASYQIKHDALKYIYNA
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 156  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 215
            RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 216  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 275
            TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 276  QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 335
            QGNKANLAAAKTTKK KAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Sbjct: 241  QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

Query: 336  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 395
            VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK
Sbjct: 301  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360

Query: 396  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 455
            SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR
Sbjct: 361  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420

Query: 456  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 515
            SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE
Sbjct: 421  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480

Query: 516  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 575
            NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS
Sbjct: 481  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540

Query: 576  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 635
            RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
Sbjct: 541  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600

Query: 636  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 695
            QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE
Sbjct: 601  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660

Query: 696  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 755
            TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN
Sbjct: 661  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720

Query: 756  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 815
            KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT
Sbjct: 721  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780

Query: 816  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 875
            HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN
Sbjct: 781  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840

Query: 876  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 935
            LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY
Sbjct: 841  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900

Query: 936  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 995
            EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ
Sbjct: 901  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960

Query: 996  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1055
            KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI
Sbjct: 961  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020

Query: 1056 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1115
            LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK
Sbjct: 1021 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080

Query: 1116 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1175
            YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA
Sbjct: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140

Query: 1176 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1235
            VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS
Sbjct: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1200

Query: 1236 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1295
            TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK
Sbjct: 1201 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1260

Query: 1296 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1355
            PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK
Sbjct: 1261 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1320

Query: 1356 PLTAK------------------------------------------------------- 1374
            PLTAK                                                       
Sbjct: 1321 PLTAKPTQYAYHFGDSSDWGAGNAATQEGIHSFSIDGQKTILRSLCIPTKQNPLKSFFPH 1380

[Close]

BLAST of IVF0026271 vs. NCBI nr
Match: KAA0035879.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051221.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051893.1 gag/pol protein [Cucumis melo var. makuwa] >TYK00551.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2575 bits (6674), Expect = 0.0
Identity = 1299/1325 (98.04%), Postives = 1300/1325 (98.11%), Query Frame = 0


Query: 36   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 95
            MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 96   RWAKANEKPEH---TSWQAYLKYWPRNMNQC-----SLLEMFGQASYQIKHDALKYIYNA 155
            RWAKANEK       S    L     +M        SL EMFGQASYQIKHDALKYIYNA
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 156  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 215
            RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 216  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 275
            TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 276  QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 335
            QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Sbjct: 241  QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

Query: 336  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 395
            VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK
Sbjct: 301  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360

Query: 396  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 455
            SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR
Sbjct: 361  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420

Query: 456  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 515
            SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE
Sbjct: 421  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480

Query: 516  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 575
            NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS
Sbjct: 481  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540

Query: 576  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 635
            RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
Sbjct: 541  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600

Query: 636  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 695
            QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE
Sbjct: 601  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660

Query: 696  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 755
            TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN
Sbjct: 661  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720

Query: 756  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 815
            KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT
Sbjct: 721  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780

Query: 816  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 875
            HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN
Sbjct: 781  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840

Query: 876  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 935
            LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY
Sbjct: 841  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900

Query: 936  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 995
            EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ
Sbjct: 901  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960

Query: 996  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1055
            KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI
Sbjct: 961  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020

Query: 1056 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1115
            LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK
Sbjct: 1021 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080

Query: 1116 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1175
            YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA
Sbjct: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140

Query: 1176 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1235
            VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS
Sbjct: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1200

Query: 1236 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1295
            TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK
Sbjct: 1201 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1260

Query: 1296 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1352
            PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK
Sbjct: 1261 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1320

[Close]

BLAST of IVF0026271 vs. NCBI nr
Match: KAA0031826.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0032384.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0039313.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0043789.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0048789.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2573 bits (6669), Expect = 0.0
Identity = 1298/1325 (97.96%), Postives = 1299/1325 (98.04%), Query Frame = 0


Query: 36   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 95
            MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 96   RWAKANEKPEH---TSWQAYLKYWPRNMNQC-----SLLEMFGQASYQIKHDALKYIYNA 155
            RWAKANEK       S    L     +M        SL EMFGQASYQIKHDALKYIYNA
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 156  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 215
            RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 216  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 275
            TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 276  QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 335
            QGNKANLAAAKTTKK KAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Sbjct: 241  QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

Query: 336  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 395
            VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK
Sbjct: 301  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360

Query: 396  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 455
            SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR
Sbjct: 361  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420

Query: 456  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 515
            SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE
Sbjct: 421  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480

Query: 516  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 575
            NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS
Sbjct: 481  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540

Query: 576  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 635
            RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
Sbjct: 541  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600

Query: 636  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 695
            QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE
Sbjct: 601  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660

Query: 696  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 755
            TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN
Sbjct: 661  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720

Query: 756  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 815
            KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT
Sbjct: 721  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780

Query: 816  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 875
            HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN
Sbjct: 781  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840

Query: 876  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 935
            LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY
Sbjct: 841  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900

Query: 936  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 995
            EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ
Sbjct: 901  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960

Query: 996  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1055
            KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI
Sbjct: 961  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020

Query: 1056 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1115
            LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK
Sbjct: 1021 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080

Query: 1116 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1175
            YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA
Sbjct: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140

Query: 1176 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1235
            VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS
Sbjct: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1200

Query: 1236 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1295
            TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK
Sbjct: 1201 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1260

Query: 1296 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1352
            PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK
Sbjct: 1261 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1320

[Close]

BLAST of IVF0026271 vs. NCBI nr
Match: KAA0047792.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2568 bits (6657), Expect = 0.0
Identity = 1296/1325 (97.81%), Postives = 1297/1325 (97.89%), Query Frame = 0


Query: 36   MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 95
            MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 96   RWAKANEKPEH---TSWQAYLKYWPRNMNQC-----SLLEMFGQASYQIKHDALKYIYNA 155
            RWAKANEK       S    L     +M        SL EMFGQASYQIKHDALKYIYNA
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 156  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 215
            RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 216  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 275
            TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 276  QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 335
            QGNKANLAAAKTTKK KAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL
Sbjct: 241  QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

Query: 336  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 395
            VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK
Sbjct: 301  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360

Query: 396  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 455
            SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR
Sbjct: 361  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420

Query: 456  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 515
            SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE
Sbjct: 421  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480

Query: 516  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 575
            NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS
Sbjct: 481  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540

Query: 576  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 635
            RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS
Sbjct: 541  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600

Query: 636  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 695
            QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE
Sbjct: 601  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660

Query: 696  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 755
            TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN
Sbjct: 661  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720

Query: 756  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 815
            KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT
Sbjct: 721  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780

Query: 816  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 875
            HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN
Sbjct: 781  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840

Query: 876  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 935
            LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY
Sbjct: 841  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900

Query: 936  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 995
            EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ
Sbjct: 901  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960

Query: 996  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1055
            KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI
Sbjct: 961  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020

Query: 1056 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1115
            LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK
Sbjct: 1021 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080

Query: 1116 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1175
            YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA
Sbjct: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140

Query: 1176 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYTDSDFQTDRDSRKS 1235
            VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDY LVYGSKDLILTGYTDSDFQTDRDSRKS
Sbjct: 1141 VGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYMLVYGSKDLILTGYTDSDFQTDRDSRKS 1200

Query: 1236 TSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1295
            TSGSVF LNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK
Sbjct: 1201 TSGSVFILNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRNFLIDLEVVPNMSK 1260

Query: 1296 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1352
            PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK
Sbjct: 1261 PITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQIASTHNVADPFTK 1320

[Close]

BLAST of IVF0026271 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 306.2 bits (783), Expect = 1.4e-82
Identity = 172/484 (35.54%), Postives = 277/484 (57.23%), Query Frame = 0


Query: 845  EDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGAD 904
            ++P T+ +A E +    W  AM+ E+ +M     W++   P   KPIGCKW+YK K  +D
Sbjct: 84   KEPSTYNEAKEFL---VWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSD 143

Query: 905  GKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFL 964
            G ++ +KARLVAKGYTQ EG+D+ ETFSPV  L S++++L+I+A +++ + Q+D+  AFL
Sbjct: 144  GTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFL 203

Query: 965  NGNLEETIYMQQPEGFIIPGQE----QKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFD 1024
            NG+L+E IYM+ P G+     +      +C L +SIYGLKQASR W ++F   +  +GF 
Sbjct: 204  NGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFV 263

Query: 1025 QIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVL 1084
            Q   +   + +I       +++YVDDI++  N+   + ++K  L + F+++DLG  ++ L
Sbjct: 264  QSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFL 323

Query: 1085 GIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEE 1144
            G++I R      + + Q  Y   ++ +  +   K   +P    VT S      +  D  +
Sbjct: 324  GLEIARSAAG--INICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAH----SGGDFVD 383

Query: 1145 MRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYT 1204
             +   Y   +G LMY  + TR DI +AV  +S++   P LAH  AV  IL Y++ T    
Sbjct: 384  AK--AYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQG 443

Query: 1205 LVYGSK-DLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEY 1264
            L Y S+ ++ L  ++D+ FQ+ +D+R+ST+G    L    + W+S KQ  ++ S+ EAEY
Sbjct: 444  LFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEY 503

Query: 1265 VAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYH 1324
             A   A  E +WL  F  +L++   +SKP  L+CDN+ A+  +     H+R KHIE   H
Sbjct: 504  RALSFATDEMMWLAQFFRELQL--PLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCH 553

[Close]

BLAST of IVF0026271 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 108.2 bits (269), Expect = 5.7e-23
Identity = 81/236 (34.32%), Postives = 121/236 (51.27%), Query Frame = 0


Query: 1039 FLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQA 1098
            +L+LYVDDILL G+   LL  +   L++ F MKDLG   + LGIQI        L LSQ 
Sbjct: 2    YLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQT 61

Query: 1099 SYIDKIVVKYSMQNSK--RGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYA 1158
             Y ++I+    M + K     LP +   ++S  + P  P D        + S VG+L Y 
Sbjct: 62   KYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYP-DPSD--------FRSIVGALQYL 121

Query: 1159 MLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTL-VYGSKDLILTGYTD 1218
             L TRPDI YAV IV +    P LA +  +K +L+Y++ T  + L ++ +  L +  + D
Sbjct: 122  TL-TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCD 181

Query: 1219 SDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVW 1272
            SD+     +R+ST+G    L    + W + +Q  ++ S+ E EY A    A E  W
Sbjct: 182  SDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of IVF0026271 vs. TAIR 10
Match: AT2G35900.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; Has 32 Blast hits to 32 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 103.6 bits (257), Expect = 1.4e-21
Identity = 63/131 (48.09%), Postives = 78/131 (59.54%), Query Frame = 0


Query: 1372 RPTEVIQSNKEFTEEDVTDQMVNRS-FPLGSSEHRPFDFPGLRSDIDAIEQSLFGSMKGF 1431
            +P+EV+QSN E TEEDVTDQMV RS  P    +  P +FPGLR D+DAIE+     MK F
Sbjct: 70   KPSEVVQSNTEHTEEDVTDQMVGRSALPNQFEDKNPLNFPGLRRDVDAIERHFLSGMKSF 129

Query: 1432 FEAAEEIKNGFFGSLRDPPLFNRDSSSPGSMRRGIPIEDHDP-EFFSN----PKEP-DSG 1491
            F+AAEE+ +  F  + D          P + R GIPIE+H   E   N    P  P  SG
Sbjct: 130  FDAAEEMTSSLFDIMGD--------HHPSTRRGGIPIENHPKVEEHRNDETAPTRPHSSG 189

Query: 1492 HVDLSGLARDV 1496
             +DLSGLA+DV
Sbjct: 190  EIDLSGLAKDV 192

[Close]

BLAST of IVF0026271 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 84.0 bits (206), Expect = 1.2e-15
Identity = 49/131 (37.40%), Postives = 74/131 (56.49%), Query Frame = 0


Query: 817 RRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFN 876
           R    +  L  +Y SLT T T+      ++P +   A++D     W +AM  EL+++  N
Sbjct: 4   RSKAGINKLNPKY-SLTITTTI-----KKEPKSVIFALKD---PGWCQAMQEELDALSRN 63

Query: 877 SVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAM 936
             W LV  P     +GCKW++K K  +DG +   KARLVAKG+ Q EG+ + ET+SPV  
Sbjct: 64  KTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVR 123

Query: 937 LKSIRILLSIA 948
             +IR +L++A
Sbjct: 124 TATIRTILNVA 125

[Close]

BLAST of IVF0026271 vs. TAIR 10
Match: ATMG00300.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 68.2 bits (165), Expect = 6.5e-11
Identity = 34/86 (39.53%), Postives = 46/86 (53.49%), Query Frame = 0


Query: 465 TQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKR 524
           T    L  + K+   LWH RL H++   +E LVK G L   + +SL  CE C+ GK  + 
Sbjct: 56  TGESNLAETAKDETRLWHSRLAHMSQRGMELLVKKGFLDSSKVSSLKFCEDCIYGKTHRV 115

Query: 525 PFTGKGHRAKEPLELVHSDLCGPMNV 551
            F+   H  K PL+ VHSDL G  +V
Sbjct: 116 NFSTGQHTTKNPLDYVHSDLWGAPSV 141

The following BLAST results are available for this feature:

BLAST of IVF0026271 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	4.9e-213	35.87	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	4.7e-147	28.91	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q94HW2	2.0e-129	26.74	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	1.3e-128	26.53	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P25600	4.0e-37	33.76	Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT...	[more]

BLAST of IVF0026271 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CSZ6	0.0e+00	93.09	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G0032...	[more]
A0A5A7UGV2	0.0e+00	93.02	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G00269...	[more]
A0A5D3CPJ6	0.0e+00	98.04	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G0004...	[more]
A0A5A7SMH8	0.0e+00	97.96	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G0025...	[more]
A0A5A7TWB9	0.0e+00	97.81	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G0031...	[more]

BLAST of IVF0026271 vs. NCBI nr


Match Name	Identity	Description
TYK14550.1	93.15	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0054490.1	93.08	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0035879.1	98.04	gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumi...	[more]
KAA0031826.1	97.96	gag/pol protein [Cucumis melo var. makuwa] >KAA0032384.1 gag/pol protein [Cucumi...	[more]
KAA0047792.1	97.81	gag/pol protein [Cucumis melo var. makuwa]	[more]

BLAST of IVF0026271 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	1.4e-82	35.54	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	5.7e-23	34.32	DNA/RNA polymerases superfamily protein	[more]
AT2G35900.1	1.4e-21	48.09	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
ATMG00820.1	1.2e-15	37.40	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
ATMG00300.1	6.5e-11	39.53	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 578..598
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 125..220 e-value: 4.4E-10 score: 39.5
None	No IPR available	GENE3D	4.10.60.10		coord: 280..316 e-value: 4.8E-7 score: 31.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1448..1495
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 233..273
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 233..256
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1464..1495
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 800..819
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 335..1201
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 1211..1352 e-value: 1.06073E-63 score: 210.788
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 289..305 e-value: 2.3E-4 score: 30.5
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 289..305 e-value: 3.1E-5 score: 23.8
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 290..305 score: 10.097754
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 534..635 e-value: 1.3E-10 score: 41.5
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 532..697 score: 23.412086
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 876..1119 e-value: 1.6E-75 score: 253.9
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 529..705 e-value: 3.7E-39 score: 136.0
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 472..521 e-value: 5.8E-14 score: 51.7
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 280..310
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 876..1319
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 531..691

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0026271.2	IVF0026271.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding