IVF0026236 (gene) Melon (IVF77) v1

Overview
NameIVF0026236
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr07: 23330152 .. 23331888 (-)
RNA-Seq ExpressionIVF0026236
SyntenyIVF0026236
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGCGACGGCGACGGCGACCGGAGTCTTGAAGTTCGGCGCTCCGGCTCCGGTAAAGGCAAAATCAGGAAGGCATCTGACGAATTTCGCAAGGCTCACGGTGCGCTATCCAAATTACTTTCTCAATACGCGGATGAAATTTCCTGCCCTTCGAGCACTTGGACAAGGAGGGAAGCCGAGTGGCAACGACGACAACGACGCCGGCGGTTTCATCAATCAGGTGTTTGTTTTTTTAATTGCCTTCTAGCTCTAAGTGTTTAAGAACATTAAACAGATGCTTAGCAGATTGCTGATTCAACATAGTAATTCGATGGCTAGTTAGCTGAATTTAGGCTGAATGAGAGAAAAATCGATGGAACTATTCAGTTAACCACATTTTAGCAGTATTTTGACTGATTTCTGGTTAGATTCTGTAAGTTTCATTGATTGAATTGGACTAGGAAATCTGGAATTTGAGTAAATTCTTGTTAGGTTGGTTATTCTGCCTTTCGATTATCAAACCTGGAAAAAGAACACTTGAACGCTAAAAAACTAAAGAACGCTAAAATATGTTGGTATGCAATAAGAAAAGTAACAACATAAAACACAACCTAGGCTTTGCCAGTCTCTTCTATTTTCTCCAAAGAAAATCCGCAAAAATTCACCCTCTCCTCCTAACCTCACACCCTTTATATAGATAAAAGCCCTAACAAATTTATTAGCTATTTACTAAGATGTCTCTTCTATCAACCATAGTGATATTCTACTAATCATCCTACTATTTTCATAACTAGAGATCTTGGGGAGCTCTTTCTTGCATTGATTCAAATTCTTCTTTGATGATGACTGCATGTTGAGCAACCAGTGTATAGACCGTTTATTATTGTTGTTGTGCCAAAATTGCTTTCAGGGTAATGGTTTCTTTATGACACAATAAATCATTTTGAAATTCGATTAACAAGTTTCTATTACTCTTACCCAAAATCTCTTTTAAGATATACTTGATTTTGACAGGAAAGCCTAAACTTAACATAACCAATATAGAATTGTGCAGAAAATAAAAAGAAAGGAGAGTTTCAAACATTATATTATATGCAATAAAATTAGTGAAGATGGCCTGGAATTAGAAAACTCAAACATAGACCTGCCATTTTAATTCCAAGATATACAAGTCCAAAATGTTAGTCAACCTCTGCTTGGGAATTTGCTCTTTGTACTCTCTAAGGTAGCAACTTTTCAGTTAAATTACATTTCTTGATTTCAAACTTGACATATTTAGACTGTATAATGGGATCTTTGATAGTTTGATTTAGTTGTTCTCAGCAATAATTTGATTCGTTTATGAGGTAGTGAAACCATATAATAATATTATCTCACTTCATAGGTAAGACGTCTTAGTCATTTTTGATATGTCATTAATATGAGTAAAAGACAAACTTTTGAAGTAGTTTAAATCATTTCTAAAATATATTTTAAGCATGTTGCTAGTTCAGAATATGTCAAAGAAAATGATACGATATACCAATATTTACTCGGTTGCTCACTTGACTATGTGATAACACAGGAGGATGTGGAATTTTTCTTGAAACTGGGGGCAGGTTCCATAGCAGGGGGATTTGGAATAAAGTATGGAAGCATAATATTTCCAGAGATAACCAAACCCAACATTGTACAAGCACTTATCATGATATCAACTCCTGTGGTTGTAGCAATTTGGCTTTTGATCAAGCAAAGTCGCGAAGAGACACAAAGCTAA

mRNA sequence

ATGGCGGCGACGGCGACGGCGACCGGAGTCTTGAAGTTCGGCGCTCCGGCTCCGGTAAAGGCAAAATCAGGAAGGCATCTGACGAATTTCGCAAGGCTCACGGTGCGCTATCCAAATTACTTTCTCAATACGCGGATGAAATTTCCTGCCCTTCGAGCACTTGGACAAGGAGGGAAGCCGAGTGGCAACGACGACAACGACGCCGGCGGTTTCATCAATCAGGAGGATGTGGAATTTTTCTTGAAACTGGGGGCAGGTTCCATAGCAGGGGGATTTGGAATAAAGTATGGAAGCATAATATTTCCAGAGATAACCAAACCCAACATTGTACAAGCACTTATCATGATATCAACTCCTGTGGTTGTAGCAATTTGGCTTTTGATCAAGCAAAGTCGCGAAGAGACACAAAGCTAA

Coding sequence (CDS)

ATGGCGGCGACGGCGACGGCGACCGGAGTCTTGAAGTTCGGCGCTCCGGCTCCGGTAAAGGCAAAATCAGGAAGGCATCTGACGAATTTCGCAAGGCTCACGGTGCGCTATCCAAATTACTTTCTCAATACGCGGATGAAATTTCCTGCCCTTCGAGCACTTGGACAAGGAGGGAAGCCGAGTGGCAACGACGACAACGACGCCGGCGGTTTCATCAATCAGGAGGATGTGGAATTTTTCTTGAAACTGGGGGCAGGTTCCATAGCAGGGGGATTTGGAATAAAGTATGGAAGCATAATATTTCCAGAGATAACCAAACCCAACATTGTACAAGCACTTATCATGATATCAACTCCTGTGGTTGTAGCAATTTGGCTTTTGATCAAGCAAAGTCGCGAAGAGACACAAAGCTAA

Protein sequence

MAATATATGVLKFGAPAPVKAKSGRHLTNFARLTVRYPNYFLNTRMKFPALRALGQGGKPSGNDDNDAGGFINQEDVEFFLKLGAGSIAGGFGIKYGSIIFPEITKPNIVQALIMISTPVVVAIWLLIKQSREETQS
Homology
BLAST of IVF0026236 vs. ExPASy TrEMBL
Match: A0A1S4E0N1 (uncharacterized protein LOC103494660 OS=Cucumis melo OX=3656 GN=LOC103494660 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 7.0e-69
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0

Query: 1   MAATATATGVLKFGAPAPVKAKSGRHLTNFARLTVRYPNYFLNTRMKFPALRALGQGGKP 60
           MAATATATGVLKFGAPAPVKAKSGRHLTNFARLTVRYPNYFLNTRMKFPALRALGQGGKP
Sbjct: 1   MAATATATGVLKFGAPAPVKAKSGRHLTNFARLTVRYPNYFLNTRMKFPALRALGQGGKP 60

Query: 61  SGNDDNDAGGFINQEDVEFFLKLGAGSIAGGFGIKYGSIIFPEITKPNIVQALIMISTPV 120
           SGNDDNDAGGFINQEDVEFFLKLGAGSIAGGFGIKYGSIIFPEITKPNIVQALIMISTPV
Sbjct: 61  SGNDDNDAGGFINQEDVEFFLKLGAGSIAGGFGIKYGSIIFPEITKPNIVQALIMISTPV 120

Query: 121 VVAIWLLIKQSREETQS 138
           VVAIWLLIKQSREETQS
Sbjct: 121 VVAIWLLIKQSREETQS 137

BLAST of IVF0026236 vs. ExPASy TrEMBL
Match: A0A0A0KWZ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G006440 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 4.1e-61
Identity = 127/145 (87.59%), Postives = 131/145 (90.34%), Query Frame = 0

Query: 1   MAATATATGVLKFGAPA--------PVKAKSGRHLTNFARLTVRYPNYFLNTRMKFPALR 60
           MAATATATGVLK G PA        P+KAKSGRH TNFA LT+RYPNYFLNTRMKFPA+R
Sbjct: 1   MAATATATGVLKIGVPAPAPAPAPPPLKAKSGRHPTNFASLTMRYPNYFLNTRMKFPAVR 60

Query: 61  ALGQGGKPSGNDDNDAGGFINQEDVEFFLKLGAGSIAGGFGIKYGSIIFPEITKPNIVQA 120
           ALGQGG PSG+DDNDAGGFINQEDVEF LKLGAGSIAGGFGIKYGSIIFPEITKPNIVQA
Sbjct: 61  ALGQGGNPSGDDDNDAGGFINQEDVEFLLKLGAGSIAGGFGIKYGSIIFPEITKPNIVQA 120

Query: 121 LIMISTPVVVAIWLLIKQSREETQS 138
           LIMISTPVVVAIWLLIKQSREETQS
Sbjct: 121 LIMISTPVVVAIWLLIKQSREETQS 145

BLAST of IVF0026236 vs. ExPASy TrEMBL
Match: A0A6J1DKQ3 (uncharacterized protein LOC111020963 OS=Momordica charantia OX=3673 GN=LOC111020963 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 4.3e-42
Identity = 103/143 (72.03%), Postives = 112/143 (78.32%), Query Frame = 0

Query: 1   MAAT-ATATGVLKFGAPAPVKAKSGRHLTNFARLTVRYPNYFLNTRMKFPALRAL----- 60
           MAAT ATATG LK G PAPVK +  +  TNF RLTVRYPN  LNT  K  A+RAL     
Sbjct: 1   MAATAATATGALKIGIPAPVKPE--KKATNFTRLTVRYPNCTLNTWPKVSAIRALDPETR 60

Query: 61  GQGGKPSGNDDNDAGGFINQEDVEFFLKLGAGSIAGGFGIKYGSIIFPEITKPNIVQALI 120
           G+GG  SG+DD  AG FINQEDV+F LKL AGSIAGG GIKYGSIIFP+I KPN+VQALI
Sbjct: 61  GEGGNSSGSDDTGAGDFINQEDVQFLLKLVAGSIAGGAGIKYGSIIFPDIAKPNLVQALI 120

Query: 121 MISTPVVVAIWLLIKQSREETQS 138
           MISTPVV+AIWLLIKQSREE QS
Sbjct: 121 MISTPVVLAIWLLIKQSREERQS 141

BLAST of IVF0026236 vs. ExPASy TrEMBL
Match: A0A6J1GTV4 (uncharacterized protein LOC111457518 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457518 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 2.8e-41
Identity = 99/137 (72.26%), Postives = 110/137 (80.29%), Query Frame = 0

Query: 1   MAATATATGVLKFGAPAPVKAKSGRHLTNFARLTVRYPNYFLNTRMKFPALRALGQGGKP 60
           MAATA ATG  K G PAPVK++  +  TNF RLTVRYPN FLNTR K PA+RALGQ G  
Sbjct: 1   MAATAAATGAWKIGVPAPVKSEK-KPPTNFTRLTVRYPNCFLNTRPKVPAIRALGQEGNS 60

Query: 61  SGNDDNDAGGFINQEDVEFFLKLGAGSIAGGFGIKYGSIIFPEITKPNIVQALIMISTPV 120
           SG DD D G  I+QEDV+F LK+ AGSIA G GIKYGSIIFPE+TKPNIVQALIM+STPV
Sbjct: 61  SGGDD-DTG--ISQEDVQFVLKMAAGSIAVGGGIKYGSIIFPEMTKPNIVQALIMVSTPV 120

Query: 121 VVAIWLLIKQSREETQS 138
           VVAIWLLI QSR++ QS
Sbjct: 121 VVAIWLLINQSRQDRQS 133

BLAST of IVF0026236 vs. ExPASy TrEMBL
Match: A0A6J1GU58 (uncharacterized protein LOC111457518 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457518 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 3.4e-39
Identity = 96/137 (70.07%), Postives = 107/137 (78.10%), Query Frame = 0

Query: 1   MAATATATGVLKFGAPAPVKAKSGRHLTNFARLTVRYPNYFLNTRMKFPALRALGQGGKP 60
           MAATA ATG  K G PAPVK++  +  TNF RLTVRYPN FLNTR K PA+RALGQ G  
Sbjct: 1   MAATAAATGAWKIGVPAPVKSEK-KPPTNFTRLTVRYPNCFLNTRPKVPAIRALGQEGNS 60

Query: 61  SGNDDNDAGGFINQEDVEFFLKLGAGSIAGGFGIKYGSIIFPEITKPNIVQALIMISTPV 120
           SG DD D G     +DV+F LK+ AGSIA G GIKYGSIIFPE+TKPNIVQALIM+STPV
Sbjct: 61  SGGDD-DTG---ISQDVQFVLKMAAGSIAVGGGIKYGSIIFPEMTKPNIVQALIMVSTPV 120

Query: 121 VVAIWLLIKQSREETQS 138
           VVAIWLLI QSR++ QS
Sbjct: 121 VVAIWLLINQSRQDRQS 132

BLAST of IVF0026236 vs. NCBI nr
Match: XP_008454177.1 (PREDICTED: uncharacterized protein LOC103494660 [Cucumis melo] >XP_016901530.1 PREDICTED: uncharacterized protein LOC103494660 [Cucumis melo])

HSP 1 Score: 267 bits (683), Expect = 4.48e-90
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0

Query: 1   MAATATATGVLKFGAPAPVKAKSGRHLTNFARLTVRYPNYFLNTRMKFPALRALGQGGKP 60
           MAATATATGVLKFGAPAPVKAKSGRHLTNFARLTVRYPNYFLNTRMKFPALRALGQGGKP
Sbjct: 1   MAATATATGVLKFGAPAPVKAKSGRHLTNFARLTVRYPNYFLNTRMKFPALRALGQGGKP 60

Query: 61  SGNDDNDAGGFINQEDVEFFLKLGAGSIAGGFGIKYGSIIFPEITKPNIVQALIMISTPV 120
           SGNDDNDAGGFINQEDVEFFLKLGAGSIAGGFGIKYGSIIFPEITKPNIVQALIMISTPV
Sbjct: 61  SGNDDNDAGGFINQEDVEFFLKLGAGSIAGGFGIKYGSIIFPEITKPNIVQALIMISTPV 120

Query: 121 VVAIWLLIKQSREETQS 137
           VVAIWLLIKQSREETQS
Sbjct: 121 VVAIWLLIKQSREETQS 137

BLAST of IVF0026236 vs. NCBI nr
Match: XP_004152177.2 (uncharacterized protein LOC101209077 isoform X1 [Cucumis sativus] >KGN52937.1 hypothetical protein Csa_014893 [Cucumis sativus])

HSP 1 Score: 241 bits (616), Expect = 9.66e-80
Identity = 127/145 (87.59%), Postives = 131/145 (90.34%), Query Frame = 0

Query: 1   MAATATATGVLKFGAPAP--------VKAKSGRHLTNFARLTVRYPNYFLNTRMKFPALR 60
           MAATATATGVLK G PAP        +KAKSGRH TNFA LT+RYPNYFLNTRMKFPA+R
Sbjct: 1   MAATATATGVLKIGVPAPAPAPAPPPLKAKSGRHPTNFASLTMRYPNYFLNTRMKFPAVR 60

Query: 61  ALGQGGKPSGNDDNDAGGFINQEDVEFFLKLGAGSIAGGFGIKYGSIIFPEITKPNIVQA 120
           ALGQGG PSG+DDNDAGGFINQEDVEF LKLGAGSIAGGFGIKYGSIIFPEITKPNIVQA
Sbjct: 61  ALGQGGNPSGDDDNDAGGFINQEDVEFLLKLGAGSIAGGFGIKYGSIIFPEITKPNIVQA 120

Query: 121 LIMISTPVVVAIWLLIKQSREETQS 137
           LIMISTPVVVAIWLLIKQSREETQS
Sbjct: 121 LIMISTPVVVAIWLLIKQSREETQS 145

BLAST of IVF0026236 vs. NCBI nr
Match: XP_038902938.1 (uncharacterized protein LOC120089511 [Benincasa hispida])

HSP 1 Score: 212 bits (539), Expect = 3.78e-68
Identity = 112/137 (81.75%), Postives = 117/137 (85.40%), Query Frame = 0

Query: 1   MAATATATGVLKFGAPAPVKAKSGRHLTNFARLTVRYPNYFLNTRMKFPALRALGQGGKP 60
           MAA  T TG LK G PAP  AKS +  TNFARLTVRYPN FLNTR+KFPA+RALGQGG P
Sbjct: 1   MAAAVTTTGALKIGIPAP--AKSEKKPTNFARLTVRYPNCFLNTRLKFPAIRALGQGGNP 60

Query: 61  SGNDDNDAGGFINQEDVEFFLKLGAGSIAGGFGIKYGSIIFPEITKPNIVQALIMISTPV 120
           SGNDD DAGGFINQEDV+F LKL AGSIAGG GIKYGSIIFPE+TKPNIVQALIMIS PV
Sbjct: 61  SGNDDTDAGGFINQEDVQFLLKLAAGSIAGGCGIKYGSIIFPEMTKPNIVQALIMISAPV 120

Query: 121 VVAIWLLIKQSREETQS 137
           VVAIWLLI QSREE QS
Sbjct: 121 VVAIWLLINQSREERQS 135

BLAST of IVF0026236 vs. NCBI nr
Match: XP_022153461.1 (uncharacterized protein LOC111020963 [Momordica charantia])

HSP 1 Score: 178 bits (452), Expect = 8.19e-55
Identity = 103/143 (72.03%), Postives = 112/143 (78.32%), Query Frame = 0

Query: 1   MAATA-TATGVLKFGAPAPVKAKSGRHLTNFARLTVRYPNYFLNTRMKFPALRAL----- 60
           MAATA TATG LK G PAPVK +  +  TNF RLTVRYPN  LNT  K  A+RAL     
Sbjct: 1   MAATAATATGALKIGIPAPVKPE--KKATNFTRLTVRYPNCTLNTWPKVSAIRALDPETR 60

Query: 61  GQGGKPSGNDDNDAGGFINQEDVEFFLKLGAGSIAGGFGIKYGSIIFPEITKPNIVQALI 120
           G+GG  SG+DD  AG FINQEDV+F LKL AGSIAGG GIKYGSIIFP+I KPN+VQALI
Sbjct: 61  GEGGNSSGSDDTGAGDFINQEDVQFLLKLVAGSIAGGAGIKYGSIIFPDIAKPNLVQALI 120

Query: 121 MISTPVVVAIWLLIKQSREETQS 137
           MISTPVV+AIWLLIKQSREE QS
Sbjct: 121 MISTPVVLAIWLLIKQSREERQS 141

BLAST of IVF0026236 vs. NCBI nr
Match: XP_022955512.1 (uncharacterized protein LOC111457518 isoform X1 [Cucurbita moschata] >KAG7018380.1 hypothetical protein SDJN02_20248 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 176 bits (445), Expect = 7.38e-54
Identity = 99/137 (72.26%), Postives = 110/137 (80.29%), Query Frame = 0

Query: 1   MAATATATGVLKFGAPAPVKAKSGRHLTNFARLTVRYPNYFLNTRMKFPALRALGQGGKP 60
           MAATA ATG  K G PAPVK++  +  TNF RLTVRYPN FLNTR K PA+RALGQ G  
Sbjct: 1   MAATAAATGAWKIGVPAPVKSEK-KPPTNFTRLTVRYPNCFLNTRPKVPAIRALGQEGNS 60

Query: 61  SGNDDNDAGGFINQEDVEFFLKLGAGSIAGGFGIKYGSIIFPEITKPNIVQALIMISTPV 120
           SG DD D G  I+QEDV+F LK+ AGSIA G GIKYGSIIFPE+TKPNIVQALIM+STPV
Sbjct: 61  SGGDD-DTG--ISQEDVQFVLKMAAGSIAVGGGIKYGSIIFPEMTKPNIVQALIMVSTPV 120

Query: 121 VVAIWLLIKQSREETQS 137
           VVAIWLLI QSR++ QS
Sbjct: 121 VVAIWLLINQSRQDRQS 133

BLAST of IVF0026236 vs. TAIR 10
Match: AT3G15900.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 26 Blast hits to 26 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 66.2 bits (160), Expect = 2.3e-11
Identity = 30/63 (47.62%), Postives = 45/63 (71.43%), Query Frame = 0

Query: 74  QEDVEFFLKLGAGSIAGGFGIKYGSIIFPEITKPNIVQALIMISTPVVVAIWLLIKQSRE 133
           QED+ + LK+G GS+AG   IKYGS++FP+IT+PN+  AL +I  PVV+++ LL   S  
Sbjct: 76  QEDLNYLLKIGVGSVAGAAIIKYGSVLFPQITRPNLTLALFIIIAPVVISVILLSLSSSS 135

Query: 134 ETQ 137
            ++
Sbjct: 136 SSK 138

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S4E0N17.0e-69100.00uncharacterized protein LOC103494660 OS=Cucumis melo OX=3656 GN=LOC103494660 PE=... [more]
A0A0A0KWZ34.1e-6187.59Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G006440 PE=4 SV=1[more]
A0A6J1DKQ34.3e-4272.03uncharacterized protein LOC111020963 OS=Momordica charantia OX=3673 GN=LOC111020... [more]
A0A6J1GTV42.8e-4172.26uncharacterized protein LOC111457518 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1GU583.4e-3970.07uncharacterized protein LOC111457518 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
Match NameE-valueIdentityDescription
XP_008454177.14.48e-90100.00PREDICTED: uncharacterized protein LOC103494660 [Cucumis melo] >XP_016901530.1 P... [more]
XP_004152177.29.66e-8087.59uncharacterized protein LOC101209077 isoform X1 [Cucumis sativus] >KGN52937.1 hy... [more]
XP_038902938.13.78e-6881.75uncharacterized protein LOC120089511 [Benincasa hispida][more]
XP_022153461.18.19e-5572.03uncharacterized protein LOC111020963 [Momordica charantia][more]
XP_022955512.17.38e-5472.26uncharacterized protein LOC111457518 isoform X1 [Cucurbita moschata] >KAG7018380... [more]
Match NameE-valueIdentityDescription
AT3G15900.12.3e-1147.62unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37224OS02G0804400 PROTEINcoord: 25..136
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 65..77

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0026236.1IVF0026236.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane