IVF0026194 (gene) Melon (IVF77) v1

Overview


Name	IVF0026194
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Pyruvate kinase
Location	chr04: 21398156 .. 21398852 (-)
RNA-Seq Expression	IVF0026194
Synteny	IVF0026194

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTGCATTCGCTAGTTTGTTTTTTGGTACTTCATTCACTGTCCATTTTCTCTCCATGGTCGAGTTTCTCTCCCTCATTAGTTTTAACAACATTCATTAGATCACTCTTTAAATCATTCAATTACAAAGGAAAGGCTACTTAAATTCATCATCAGTAAACTATTTTTTTTCTTTAGTACAATCATCACATCATATTCATTTTCAAGGGGTTCAATTGCATCTGGGAAGTTGGGAAGGAGTCAAAAGAGATTTTTAAGCCAGAACTGACTTCTCTTACTTTCTTTCTCTGCACTACTAACTTCCAAAGTTGCATTTTTTCTTGTTATTTGAGGCCCCTTGAAATTTGTTGTTTGTTGCCCTCCTGTTTTCCAGAGCTTCTTTTTCCTACAACGACTAAGATTGTTGGTACTCTGGGTCCTAACTCTCGATCTGTACAAGTTATTCTGCTTGTTTGACGGCTGGAATGTACGGTATGGTTGGCTTCCTTAGCAACTCTTTTCTTTTGTTAAAGTAGGGAACTTTTGTTTTTCTATTTTCTTTGGTGGCTGCTAGTTGCTCGGTTCGACTTTTCATGGCGTAGTCCGGAGTACCATCAAGAGACTTTGGAAAATTTGAAGATGGCTGTTAAAAGCACCAAGAAACTTTGTGCTGTATGTTCGTTTTTAATATGTTTGAGTGTATATTTTATCATTTGA

mRNA sequence

ATGACTGCATTCGCTATTGCTCGGTTCGACTTTTCATGGCGTAGTCCGGAGTACCATCAAGAGACTTTGGAAAATTTGAAGATGGCTGTTAAAAGCACCAAGAAACTTTGTGCTGTATGTTCGTTTTTAATATGTTTGAGTGTATATTTTATCATTTGA

Coding sequence (CDS)

ATGACTGCATTCGCTATTGCTCGGTTCGACTTTTCATGGCGTAGTCCGGAGTACCATCAAGAGACTTTGGAAAATTTGAAGATGGCTGTTAAAAGCACCAAGAAACTTTGTGCTGTATGTTCGTTTTTAATATGTTTGAGTGTATATTTTATCATTTGA

Protein sequence

MTAFAIARFDFSWRSPEYHQETLENLKMAVKSTKKLCAVCSFLICLSVYFII

Homology

[Close]

BLAST of IVF0026194 vs. ExPASy Swiss-Prot
Match: B8BJ39 (Pyruvate kinase 1, cytosolic OS=Oryza sativa subsp. indica OX=39946 GN=OsI_35105 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 3.5e-10
Identity = 28/35 (80.00%), Postives = 32/35 (91.43%), Query Frame = 0


Query: 5  AIARFDFSWRSPEYHQETLENLKMAVKSTKKLCAV 40
          ++ARFDFSW   EYHQETLENLK+A+KSTKKLCAV
Sbjct: 55 SVARFDFSWGDAEYHQETLENLKLAIKSTKKLCAV 89

[Close]

BLAST of IVF0026194 vs. ExPASy Swiss-Prot
Match: Q2RAK2 (Pyruvate kinase 1, cytosolic OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0148500 PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 3.5e-10
Identity = 28/35 (80.00%), Postives = 32/35 (91.43%), Query Frame = 0


Query: 5  AIARFDFSWRSPEYHQETLENLKMAVKSTKKLCAV 40
          ++ARFDFSW   EYHQETLENLK+A+KSTKKLCAV
Sbjct: 55 SVARFDFSWGDAEYHQETLENLKLAIKSTKKLCAV 89

[Close]

BLAST of IVF0026194 vs. ExPASy Swiss-Prot
Match: B8BM17 (Pyruvate kinase 2, cytosolic OS=Oryza sativa subsp. indica OX=39946 GN=OsI_37456 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 4.6e-10
Identity = 28/35 (80.00%), Postives = 32/35 (91.43%), Query Frame = 0


Query: 5  AIARFDFSWRSPEYHQETLENLKMAVKSTKKLCAV 40
          ++ARFDFSW   EYHQETLENLK+A+KSTKKLCAV
Sbjct: 55 SVARFDFSWGDAEYHQETLENLKVAIKSTKKLCAV 89

[Close]

BLAST of IVF0026194 vs. ExPASy Swiss-Prot
Match: Q2QXR8 (Pyruvate kinase 2, cytosolic OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0145700 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 4.6e-10
Identity = 28/35 (80.00%), Postives = 32/35 (91.43%), Query Frame = 0


Query: 5  AIARFDFSWRSPEYHQETLENLKMAVKSTKKLCAV 40
          ++ARFDFSW   EYHQETLENLK+A+KSTKKLCAV
Sbjct: 55 SVARFDFSWGDAEYHQETLENLKVAIKSTKKLCAV 89

[Close]

BLAST of IVF0026194 vs. ExPASy Swiss-Prot
Match: O65595 (Probable pyruvate kinase, cytosolic isozyme OS=Arabidopsis thaliana OX=3702 GN=At4g26390 PE=3 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 4.5e-05
Identity = 22/39 (56.41%), Postives = 29/39 (74.36%), Query Frame = 0


Query: 1  MTAFAIARFDFSWRSPEYHQETLENLKMAVKSTKKLCAV 40
          M   ++ARF+FS  S EYHQETL+NL+ A+ +T  LCAV
Sbjct: 30 MAGMSVARFNFSHGSYEYHQETLDNLRQAMLNTGMLCAV 68

[Close]

BLAST of IVF0026194 vs. ExPASy TrEMBL
Match: A0A5A7UKP0 (Pyruvate kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold406G00640 PE=3 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 3.7e-10
Identity = 33/40 (82.50%), Postives = 37/40 (92.50%), Query Frame = 0


Query: 5  AIARFDFSWRSPEYHQETLENLKMAVKSTKKLCAVCSFLI 45
          ++ARFDFSWRSPEYHQETLENLKMAVKSTKKLCA   F++
Sbjct: 2  SVARFDFSWRSPEYHQETLENLKMAVKSTKKLCAEDGFVV 41

[Close]

BLAST of IVF0026194 vs. ExPASy TrEMBL
Match: A0A162A8B6 (Pyruvate kinase OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_015026 PE=3 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 4.1e-09
Identity = 31/38 (81.58%), Postives = 34/38 (89.47%), Query Frame = 0


Query: 2  TAFAIARFDFSWRSPEYHQETLENLKMAVKSTKKLCAV 40
          T  ++ARFDFSW  PEYHQETLENLK+AVKSTKKLCAV
Sbjct: 52 TGMSVARFDFSWGEPEYHQETLENLKIAVKSTKKLCAV 89

[Close]

BLAST of IVF0026194 vs. ExPASy TrEMBL
Match: A0A151U359 (Pyruvate kinase OS=Cajanus cajan OX=3821 GN=KK1_006424 PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 9.0e-09
Identity = 30/35 (85.71%), Postives = 33/35 (94.29%), Query Frame = 0


Query: 5  AIARFDFSWRSPEYHQETLENLKMAVKSTKKLCAV 40
          ++ARFDFSW  PEYHQETLENLK+AVKSTKKLCAV
Sbjct: 55 SVARFDFSWHDPEYHQETLENLKVAVKSTKKLCAV 89

[Close]

BLAST of IVF0026194 vs. ExPASy TrEMBL
Match: A0A6P5YZ60 (Pyruvate kinase OS=Durio zibethinus OX=66656 GN=LOC111296061 PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 9.0e-09
Identity = 30/35 (85.71%), Postives = 33/35 (94.29%), Query Frame = 0


Query: 5  AIARFDFSWRSPEYHQETLENLKMAVKSTKKLCAV 40
          ++ARFDFSWR PEYHQETLENLK AVK+TKKLCAV
Sbjct: 55 SVARFDFSWRDPEYHQETLENLKTAVKTTKKLCAV 89

[Close]

BLAST of IVF0026194 vs. ExPASy TrEMBL
Match: A0A6P5YZ53 (Pyruvate kinase OS=Durio zibethinus OX=66656 GN=LOC111296061 PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 9.0e-09
Identity = 30/35 (85.71%), Postives = 33/35 (94.29%), Query Frame = 0


Query: 5  AIARFDFSWRSPEYHQETLENLKMAVKSTKKLCAV 40
          ++ARFDFSWR PEYHQETLENLK AVK+TKKLCAV
Sbjct: 55 SVARFDFSWRDPEYHQETLENLKTAVKTTKKLCAV 89

[Close]

BLAST of IVF0026194 vs. NCBI nr
Match: KAA0054856.1 (pyruvate kinase 2, cytosolic-like [Cucumis melo var. makuwa])

HSP 1 Score: 72.0 bits (175), Expect = 6.10e-13
Identity = 33/40 (82.50%), Postives = 37/40 (92.50%), Query Frame = 0


Query: 5  AIARFDFSWRSPEYHQETLENLKMAVKSTKKLCAVCSFLI 44
          ++ARFDFSWRSPEYHQETLENLKMAVKSTKKLCA   F++
Sbjct: 2  SVARFDFSWRSPEYHQETLENLKMAVKSTKKLCAEDGFVV 41

[Close]

BLAST of IVF0026194 vs. NCBI nr
Match: XP_008467042.1 (PREDICTED: pyruvate kinase 2, cytosolic-like [Cucumis melo])

HSP 1 Score: 65.1 bits (157), Expect = 4.45e-12
Identity = 29/35 (82.86%), Postives = 33/35 (94.29%), Query Frame = 0


Query: 5  AIARFDFSWRSPEYHQETLENLKMAVKSTKKLCAV 39
          ++ARFD SW SP+YHQETLENLK+AVKSTKKLCAV
Sbjct: 27 SVARFDISWGSPDYHQETLENLKIAVKSTKKLCAV 61

[Close]

BLAST of IVF0026194 vs. NCBI nr
Match: XP_017247750.1 (PREDICTED: pyruvate kinase 1, cytosolic [Daucus carota subsp. sativus] >KZM97612.1 hypothetical protein DCAR_015026 [Daucus carota subsp. sativus])

HSP 1 Score: 68.6 bits (166), Expect = 1.02e-11
Identity = 31/38 (81.58%), Postives = 34/38 (89.47%), Query Frame = 0


Query: 2  TAFAIARFDFSWRSPEYHQETLENLKMAVKSTKKLCAV 39
          T  ++ARFDFSW  PEYHQETLENLK+AVKSTKKLCAV
Sbjct: 52 TGMSVARFDFSWGEPEYHQETLENLKIAVKSTKKLCAV 89

[Close]

BLAST of IVF0026194 vs. NCBI nr
Match: MCH97268.1 (pyruvate kinase [Trifolium medium])

HSP 1 Score: 64.3 bits (155), Expect = 1.46e-11
Identity = 31/39 (79.49%), Postives = 34/39 (87.18%), Query Frame = 0


Query: 5  AIARFDFSWRSPEYHQETLENLKMAVKSTKKLCAVCSFL 43
          ++ARFDFSW  PEYHQETLENLK A+K TKKLCAV SFL
Sbjct: 13 SVARFDFSWCDPEYHQETLENLKTAIKGTKKLCAV-SFL 50

[Close]

BLAST of IVF0026194 vs. NCBI nr
Match: TQD94387.1 (hypothetical protein C1H46_019987 [Malus baccata])

HSP 1 Score: 66.6 bits (161), Expect = 1.68e-11
Identity = 30/35 (85.71%), Postives = 33/35 (94.29%), Query Frame = 0


Query: 5  AIARFDFSWRSPEYHQETLENLKMAVKSTKKLCAV 39
          ++ARFDFSW +PEYHQETLENLK AVKSTKKLCAV
Sbjct: 55 SVARFDFSWGNPEYHQETLENLKAAVKSTKKLCAV 89

[Close]

BLAST of IVF0026194 vs. TAIR 10
Match: AT2G36580.1 (Pyruvate kinase family protein )

HSP 1 Score: 63.2 bits (152), Expect = 7.3e-11
Identity = 28/35 (80.00%), Postives = 32/35 (91.43%), Query Frame = 0


Query: 5  AIARFDFSWRSPEYHQETLENLKMAVKSTKKLCAV 40
          ++ARFDFSW   +YHQETLENLK+AVKSTKKLCAV
Sbjct: 55 SVARFDFSWCDADYHQETLENLKIAVKSTKKLCAV 89

[Close]

BLAST of IVF0026194 vs. TAIR 10
Match: AT3G52990.1 (Pyruvate kinase family protein )

HSP 1 Score: 61.2 bits (147), Expect = 2.8e-10
Identity = 26/35 (74.29%), Postives = 32/35 (91.43%), Query Frame = 0


Query: 5  AIARFDFSWRSPEYHQETLENLKMAVKSTKKLCAV 40
          ++ARFDFSW   +YHQETL+NLK+AV+STKKLCAV
Sbjct: 55 SVARFDFSWGDADYHQETLDNLKVAVRSTKKLCAV 89

[Close]

BLAST of IVF0026194 vs. TAIR 10
Match: AT3G52990.2 (Pyruvate kinase family protein )

HSP 1 Score: 61.2 bits (147), Expect = 2.8e-10
Identity = 26/35 (74.29%), Postives = 32/35 (91.43%), Query Frame = 0


Query: 5  AIARFDFSWRSPEYHQETLENLKMAVKSTKKLCAV 40
          ++ARFDFSW   +YHQETL+NLK+AV+STKKLCAV
Sbjct: 2  SVARFDFSWGDADYHQETLDNLKVAVRSTKKLCAV 36

[Close]

BLAST of IVF0026194 vs. TAIR 10
Match: AT4G26390.1 (Pyruvate kinase family protein )

HSP 1 Score: 47.8 bits (112), Expect = 3.2e-06
Identity = 22/39 (56.41%), Postives = 29/39 (74.36%), Query Frame = 0


Query: 1  MTAFAIARFDFSWRSPEYHQETLENLKMAVKSTKKLCAV 40
          M   ++ARF+FS  S EYHQETL+NL+ A+ +T  LCAV
Sbjct: 30 MAGMSVARFNFSHGSYEYHQETLDNLRQAMLNTGMLCAV 68

[Close]

BLAST of IVF0026194 vs. TAIR 10
Match: AT5G56350.1 (Pyruvate kinase family protein )

HSP 1 Score: 43.9 bits (102), Expect = 4.6e-05
Identity = 21/34 (61.76%), Postives = 26/34 (76.47%), Query Frame = 0


Query: 6  IARFDFSWRSPEYHQETLENLKMAVKSTKKLCAV 40
          +ARF+FS  S EYHQETL+NL  A+ +T  LCAV
Sbjct: 36 VARFNFSHGSHEYHQETLDNLHQAMLNTGILCAV 69

The following BLAST results are available for this feature:

BLAST of IVF0026194 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B8BJ39	3.5e-10	80.00	Pyruvate kinase 1, cytosolic OS=Oryza sativa subsp. indica OX=39946 GN=OsI_35105...	[more]
Q2RAK2	3.5e-10	80.00	Pyruvate kinase 1, cytosolic OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g01...	[more]
B8BM17	4.6e-10	80.00	Pyruvate kinase 2, cytosolic OS=Oryza sativa subsp. indica OX=39946 GN=OsI_37456...	[more]
Q2QXR8	4.6e-10	80.00	Pyruvate kinase 2, cytosolic OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g01...	[more]
O65595	4.5e-05	56.41	Probable pyruvate kinase, cytosolic isozyme OS=Arabidopsis thaliana OX=3702 GN=A...	[more]

BLAST of IVF0026194 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UKP0	3.7e-10	82.50	Pyruvate kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold406G0064...	[more]
A0A162A8B6	4.1e-09	81.58	Pyruvate kinase OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_015026 PE=3 SV=...	[more]
A0A151U359	9.0e-09	85.71	Pyruvate kinase OS=Cajanus cajan OX=3821 GN=KK1_006424 PE=3 SV=1	[more]
A0A6P5YZ60	9.0e-09	85.71	Pyruvate kinase OS=Durio zibethinus OX=66656 GN=LOC111296061 PE=3 SV=1	[more]
A0A6P5YZ53	9.0e-09	85.71	Pyruvate kinase OS=Durio zibethinus OX=66656 GN=LOC111296061 PE=3 SV=1	[more]

BLAST of IVF0026194 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0054856.1	6.10e-13	82.50	pyruvate kinase 2, cytosolic-like [Cucumis melo var. makuwa]	[more]
XP_008467042.1	4.45e-12	82.86	PREDICTED: pyruvate kinase 2, cytosolic-like [Cucumis melo]	[more]
XP_017247750.1	1.02e-11	81.58	PREDICTED: pyruvate kinase 1, cytosolic [Daucus carota subsp. sativus] >KZM97612...	[more]
MCH97268.1	1.46e-11	79.49	pyruvate kinase [Trifolium medium]	[more]
TQD94387.1	1.68e-11	85.71	hypothetical protein C1H46_019987 [Malus baccata]	[more]

BLAST of IVF0026194 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G36580.1	7.3e-11	80.00	Pyruvate kinase family protein	[more]
AT3G52990.1	2.8e-10	74.29	Pyruvate kinase family protein	[more]
AT3G52990.2	2.8e-10	74.29	Pyruvate kinase family protein	[more]
AT4G26390.1	3.2e-06	56.41	Pyruvate kinase family protein	[more]
AT5G56350.1	4.6e-05	61.76	Pyruvate kinase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR040442	Pyruvate kinase-like domain superfamily	GENE3D	3.20.20.60		coord: 5..40 e-value: 9.5E-6 score: 26.7
None	No IPR available	PANTHER	PTHR11817:SF89	PYRUVATE KINASE	coord: 4..40
IPR001697	Pyruvate kinase	PANTHER	PTHR11817	PYRUVATE KINASE	coord: 4..40

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0026194.1	IVF0026194.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006096	glycolytic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0030955	potassium ion binding
molecular_function	GO:0004743	pyruvate kinase activity