IVF0026191 (gene) Melon (IVF77) v1

Overview


Name	IVF0026191
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	54S ribosomal protein L51, mitochondrial
Location	chr07: 22675075 .. 22678386 (+)
RNA-Seq Expression	IVF0026191
Synteny	IVF0026191

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGGCCTTCTTTCATATAACCAACCCCCGCCCCTGCACGCATTTCCTGCCCGCCGCCGTTTCAGCCTGCCGGCGAAATCGCCGCCACCCCTTATCGCACTCTCTCGCCACTTTGAGGAATCAAAGCTACTTATCGCTATTTATTTTTTCTCCTCAGGAACACAGTGGTCTAGCCCCTTACCCTCGCCGTTGGTAAGATCGCGCCACCGCCGCTCGTTTTTCAGATCCCAAGGTTTTATTTTTTAATTTTTGTTTCGTCGGGTTATGCTGGTTTATTATCTGCACCCACGGAGAAGAAAAGCAAGAACTTTTGTTTTTGTTGATTTCTTTTGCATACGACGTTCTACTAGTCAGCATGAAAACTAAGAATGTATACCTTACAAGTTGCAAAATAATAATAACAATTAAAGAGGAAAGAAATGTTCAAGAAGATGAAAAAAAAAAACACACACACACACACACTCACACACACAGCTTGGGAATTGAAAAGCTGTATTTGATAAAGATGGAACTAGTGCTTTCCAAAATTTCCTTTTCAAAAAAAAAAAAAAAAACCCAGCGGAATACAATGGACAATCAAAATAGAGAATGGGTTTAGGTGTATTGATTGCATTAGGCCTTCTTCTTGAATATATTAGAAACTATCAATACCTATGAACTAGAGCATAGTAGGGGGATGAGCCTTTGCTTATGAACTAGCCAGGCATTAGATGGTTTTCCAACCTTTTTGCAGAATATGGCTTTGCGAGGTGTTTGGCAGCTTAAGAAGTTGGTTGTCAGCTACTGTGATTGGGGAGGAAGCAGCAGGGGCATCAGGTTTGTTGGATTGCTAAACCAGTGCCTATTAGATTACTTCATTACTGAGAATTCGGTTTTTAACTGATGGAGGTTTAAGTTTTAATCTGGACTTTGTATTTTCATTTTCCAGCATAATTACCTTACTCATATTGCTTTGTTTGAGCTTACGGTAATGAGGTTTGAGTAGGGTAGAAGTAGAAGATATTGGAAATTTCTTGCTTTTTAGAAATGAGTTTTTCAGAACAGGGTTCTTGAAGTGTGGCGAGGCACATCCTTTTTTTTTTTGCAGACCGTCCCTTTTTGCCTACAAAACCTACAAAATGCCCTTATCTTTTCTTTTACCTAACCCAAACCTGGAATGTCCGCGTGTCATCTCTTTAATAGAATTGTCAATGTTTAGTAATGCTAGTGATGTTTGAGGAAATTGAACCACACCATAGGGTTCTTTAAAATTATAGGCTCAAAATCAGAATCAAAACACCATATCAATTGGAATTGTAGTTTAACTTATGTTTATTCTCTCTAATGTAACACATTCCGGTTTCCAATTTTAAGCCTAAGTTTAATTTATGTTGCTTGACTTGATACAGTTCTATTTTCTTAATAACCGACAGCGTAGATTTTACATAGATTATACTGTATAAGTTGCTTTTGTGGAAGCAAACTGGAAAGATTTTTTCTTACTCATCAGTTTAGTATCAAATTGTACAGCCTCCATAGGAGGACTCTAATCAGTTGTCACATGTATGCTTGGATTCACTTATTCCAAGTTATGTTCTTTCGAGTGTGCTGTTGGGAAAACTATAGAATAGATAGCAGACCTATGCAAATCATATCCTCAATCTTGCATATATATCAAATAGATACATATGTCTACTAGCGCTTGCGTCATTGCTATGTAGGTTCTGATAAAGTGCATTTATCTGCCCAGGGAATGAGAATTCCTCTAGGAATCTCTGATTTTTTAACTTATGTTTTTCTTTGAAGCCTAAAAATCAAACATGAGAAAAGTTCCATGTTTAGAGTGGAGCCTTGCCTAGTTGACTTCCTGGGTCTCTTTGGTGGGGTGTGAAGTCAGTTAGCTTCTTGAATGCTTACCTTGGTCTTCATTTAGGAGATGTCTCGACATCTGTGTGTTTCTGGAACCAGTGGTGGGGAAAGTTCAGAAATGGTCGTCATTGTGGAAATAAGTTTTTTCTCTGGAGGGGGAAGATTAATCTTGATTCAATGTGTTTAGTAGAACTTCTATACAGTACGTCTTTCTTAGCACCTCACCTTTTTTACGGGGTCTCAGGCAGTGAGTTGAAGGGTTATTGTAAGAATTCCAGGTCTGCTATTGCGTTGGGATTTCTTATGTTCGCTCAGTTCGTTGAGTGTTCTATTGGGGATGGTCGAACACCTACATTTGGGAGAATTTCTGGGTGAATGAGAGAGACCCCGCTGTGCCTGGTTTCTTCAGCTTTATTCTTTTGGATTTTGGCTTTGCAACTGGGTTTTTTTTTCCCTTTTCTTCTTGTTCTTGAGCTTGTTTTTTGTATGCTCTTCTGTATCCTTTTATCTATCTCAATGAAAGGTTGGTTTCTTCTAAAAAATAAAAATAGAAACTTTCCTTTATCCCTTTCCTGTAAAATAAAGCCAAGCCTTCTCTGCCCTCCCTTTCGCTGGATGAGACCCGGTTATTAGCCCAGTCATGAATCACCGGTCAACTTATCAGTGCTTCATATCATCTTGCTACTATCATATGGATCAAAAAGATAATGTAACACCCCTGTTACTTCACTAGCAGCCTAAACATTTTTCTTCATTTATAGAACATACTCGTTTATTGCTATTATCCTTATGTAGCTTTTTGAGAGTGAAACACTTTCCTGAATGATTTGAATGTCATCATTGAATTTGCAGGGCATTTATGGAGTCGCAGATGCCAGCTTTTAAGGAGAAAAATCCTCAGCTAGAAGTAGTTACTGAGCTCAATCGTGGCCAGCATCCATACTTGAAGGGCTTCTACAGTAATTCCCTTTCCCTCTCAACTTTTGGTAGTTAATAGTTATAATTTACAAAGTGTTTTATGTTTGGTTTTTACCCGTATTCTTTATCTTTCACAGAAAGCAATAACAACCGGGTAGTATGTGTGAAGAACATGGATCCAGAAGAAATTCATTCATGTGCAACGAGGCTAAGGAATTCACTGGGACGAAAGGTCGTAAAACTGAGAACAAGACATGTAACTAAAAATCCCAGTGTGCAAGGTACCTGGAACACAGATGTAAGATTTTGAGGGCTGGATGGATAATTTAATTATTCCTGAAGAGCTTGATATCATTTAGAGAATGTTCTTTCCATCAATAATAAGATGTTGAAACCAAACTTATTTATAGAATTGCTTGAGTTTTTGTTGTTTGTAGTGAGTCCTTATGTAACTTTTGAGGTAGTTATTATTTCCCCGGTTCTCTGAATACTTTCTGGAAGGTTTTCGGTAAAAACATGAGTTCGTCTTGAAGAATGTCTGAAACGG

mRNA sequence

CCGGCCTTCTTTCATATAACCAACCCCCGCCCCTGCACGCATTTCCTGCCCGCCGCCGTTTCAGCCTGCCGGCGAAATCGCCGCCACCCCTTATCGCACTCTCTCGCCACTTTGAGGAATCAAAGCTACTTATCGCTATTTATTTTTTCTCCTCAGGAACACAGTGGTCTAGCCCCTTACCCTCGCCGTTGAATATGGCTTTGCGAGGTGTTTGGCAGCTTAAGAAGTTGGTTGTCAGCTACTGTGATTGGGGAGGAAGCAGCAGGGGCATCAGGGCATTTATGGAGTCGCAGATGCCAGCTTTTAAGGAGAAAAATCCTCAGCTAGAAGTAGTTACTGAGCTCAATCGTGGCCAGCATCCATACTTGAAGGGCTTCTACAAAAGCAATAACAACCGGGTAGTATGTGTGAAGAACATGGATCCAGAAGAAATTCATTCATGTGCAACGAGGCTAAGGAATTCACTGGGACGAAAGGTCGTAAAACTGAGAACAAGACATGTAACTAAAAATCCCAGTGTGCAAGGTACCTGGAACACAGATGTAAGATTTTGAGGGCTGGATGGATAATTTAATTATTCCTGAAGAGCTTGATATCATTTAGAGAATGTTCTTTCCATCAATAATAAGATGTTGAAACCAAACTTATTTATAGAATTGCTTGAGTTTTTGTTGTTTGTAGTGAGTCCTTATGTAACTTTTGAGGTAGTTATTATTTCCCCGGTTCTCTGAATACTTTCTGGAAGGTTTTCGGTAAAAACATGAGTTCGTCTTGAAGAATGTCTGAAACGG

Coding sequence (CDS)

ATGGCTTTGCGAGGTGTTTGGCAGCTTAAGAAGTTGGTTGTCAGCTACTGTGATTGGGGAGGAAGCAGCAGGGGCATCAGGGCATTTATGGAGTCGCAGATGCCAGCTTTTAAGGAGAAAAATCCTCAGCTAGAAGTAGTTACTGAGCTCAATCGTGGCCAGCATCCATACTTGAAGGGCTTCTACAAAAGCAATAACAACCGGGTAGTATGTGTGAAGAACATGGATCCAGAAGAAATTCATTCATGTGCAACGAGGCTAAGGAATTCACTGGGACGAAAGGTCGTAAAACTGAGAACAAGACATGTAACTAAAAATCCCAGTGTGCAAGGTACCTGGAACACAGATGTAAGATTTTGA

Protein sequence

MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKGFYKSNNNRVVCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF

Homology

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BLAST of IVF0026191 vs. ExPASy Swiss-Prot
Match: Q9UUC8 (54S ribosomal protein L51, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mrpl51 PE=3 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 4.6e-13
Identity = 30/105 (28.57%), Postives = 61/105 (58.10%), Query Frame = 0


Query: 10  KKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKGFYKSNNNRV 69
           +++  SYC+WGGSS+G++ F+ +++ +  +++  +E      +G+HP ++ +Y +   +V
Sbjct: 24  RRIEFSYCNWGGSSKGMKEFLSTKLESLAKESQDVEFHVTNRQGKHPLIRAYYNTGREKV 83

Query: 70  VCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRHVTKNPSVQGTWN 115
           +C + M    I   A   R+S G K   ++    + NPSV+G W+
Sbjct: 84  ICTRKMSASSIFQKAILCRDSDGLKPRLIKYPVESTNPSVRGIWS 128

[Close]

BLAST of IVF0026191 vs. ExPASy Swiss-Prot
Match: Q758S3 (54S ribosomal protein L51, mitochondrial OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=MRPL51 PE=3 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 5.1e-12
Identity = 39/117 (33.33%), Postives = 64/117 (54.70%), Query Frame = 0


Query: 6   VWQLKKLVVSYCDWGGSSRGIRAFMES-QMPAFKEKNPQLEVVTELNRGQHPYLKGFYKS 65
           ++  KK+ + YC+WGGSS+G+R F+ S ++  + EK PQ++       G HP LK  Y +
Sbjct: 20  IFPCKKITLQYCNWGGSSQGLRDFLTSKRLAKWAEKYPQIQFEVVAKAG-HPVLKAEYIN 79

Query: 66  NNNRVVCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRHVTK-------NPSVQGTWN 115
             N+ +CV+N++ + +      LR S G ++     RH  K       N SV+G W+
Sbjct: 80  GLNKAICVRNLNVDHVELKLKLLRESSGAQL-----RHYPKNANVLSLNQSVRGVWS 130

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BLAST of IVF0026191 vs. ExPASy Swiss-Prot
Match: Q06090 (54S ribosomal protein L51, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MRPL51 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.8e-09
Identity = 31/113 (27.43%), Postives = 68/113 (60.18%), Query Frame = 0


Query: 6   VWQLKKLVVSYCDWGGSSRGIRAFMES-QMPAFKEKNPQLEVVTELNRGQHPYLKGFYKS 65
           V+  +K+ + +C+WGGSS G+R F+ S ++  + ++ P ++    + +  HP L+  Y +
Sbjct: 20  VFPCRKITLQFCNWGGSSEGMRKFLTSKRLDKWGQEFPWIQFEV-MRKSGHPLLRAEYTN 79

Query: 66  NNNRVVCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRH---VTKNPSVQGTWN 115
              +V+CV+N++ + + +    L++S G  +++ RT++    + N SV+G W+
Sbjct: 80  GREKVICVRNLNIDNVENKLKLLKDSDG-DILRRRTKNDNVESLNSSVRGIWS 130

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BLAST of IVF0026191 vs. ExPASy Swiss-Prot
Match: Q99N89 (39S ribosomal protein L43, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl43 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 5.8e-08
Identity = 36/110 (32.73%), Postives = 53/110 (48.18%), Query Frame = 0


Query: 4   RGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKGFYK 63
           R V QL++L +S      SSRG R F+E ++  F  +NP + V         P +   Y 
Sbjct: 21  RYVQQLQRLSLSLSRDAPSSRGAREFVEREVTDFARRNPGVVVYVNPRPCAMPRIVAEYL 80

Query: 64  SNNNRVVCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRHVTKNPSVQGTW 114
           +   R   V +   EEI S   +L +  G  V+++R    T NPS+QG W
Sbjct: 81  NGAVREENVNSKSVEEIKSLVQKLADQSGLDVIRIRKPFHTDNPSIQGQW 130

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BLAST of IVF0026191 vs. ExPASy Swiss-Prot
Match: Q8N983 (39S ribosomal protein L43, mitochondrial OS=Homo sapiens OX=9606 GN=MRPL43 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 3.8e-07
Identity = 34/111 (30.63%), Postives = 53/111 (47.75%), Query Frame = 0


Query: 4   RGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKGFYK 63
           R V QL++L  S    G SSRG R F+E ++  F  +NP + +         P +   Y 
Sbjct: 21  RYVQQLQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPRVVAEYL 80

Query: 64  SNNNRVVCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRHVTKNPSVQGTWN 115
           +   R   +     EEI +   +L +  G  V+++R    T NPS+QG W+
Sbjct: 81  NGAVREESIHCKSVEEISTLVQKLADQSGLDVIRIRKPFHTDNPSIQGQWH 131

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BLAST of IVF0026191 vs. ExPASy TrEMBL
Match: A0A1S3BXU0 (54S ribosomal protein L51, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494585 PE=3 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 7.7e-64
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKG 60
           MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKG
Sbjct: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKG 60

Query: 61  FYKSNNNRVVCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 120
           FYKSNNNRVVCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF
Sbjct: 61  FYKSNNNRVVCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 119

[Close]

BLAST of IVF0026191 vs. ExPASy TrEMBL
Match: A0A0A0KU37 (L51_S25_CI-B8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G011700 PE=3 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 1.0e-60
Identity = 114/119 (95.80%), Postives = 117/119 (98.32%), Query Frame = 0


Query: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKG 60
           MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTEL RGQHP+LKG
Sbjct: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELIRGQHPHLKG 60

Query: 61  FYKSNNNRVVCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 120
           F++SNNNRVVCVKNMDPEEIHSCA RLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF
Sbjct: 61  FFRSNNNRVVCVKNMDPEEIHSCAMRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 119

[Close]

BLAST of IVF0026191 vs. ExPASy TrEMBL
Match: A0A5A7TSM4 (54S ribosomal protein L51 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001760 PE=3 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 1.8e-57
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0


Query: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKG 60
           MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKG
Sbjct: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKG 60

Query: 61  FYKSNNNRVVCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRHVTKNPSVQ 111
           FYKSNNNRVVCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRHVTKNPSVQ
Sbjct: 61  FYKSNNNRVVCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRHVTKNPSVQ 110

[Close]

BLAST of IVF0026191 vs. ExPASy TrEMBL
Match: A0A6J1IW90 (54S ribosomal protein L51, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111479166 PE=3 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 5.9e-56
Identity = 102/119 (85.71%), Postives = 115/119 (96.64%), Query Frame = 0


Query: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKG 60
           MALRGVWQLKKL+VSYCDWGGSSRGIRAFM+S++PAF+EKNPQL++VTEL RGQHP+LKG
Sbjct: 1   MALRGVWQLKKLIVSYCDWGGSSRGIRAFMDSELPAFREKNPQLQIVTELIRGQHPHLKG 60

Query: 61  FYKSNNNRVVCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 120
           FYKSNN+RV+CVKNMDPE+IH  ATRLRN+LGRKV+KLRTRHVTKNPS QGTWNTDVRF
Sbjct: 61  FYKSNNHRVICVKNMDPEDIHLHATRLRNALGRKVLKLRTRHVTKNPSAQGTWNTDVRF 119

[Close]

BLAST of IVF0026191 vs. ExPASy TrEMBL
Match: A0A6J1DVX7 (54S ribosomal protein L51, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111024881 PE=3 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 6.6e-55
Identity = 103/119 (86.55%), Postives = 113/119 (94.96%), Query Frame = 0


Query: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKG 60
           MALRGVWQL+KL+VSYCDWGGSSRGIRAFM+SQ+PAFKEKNPQLEVVTEL RGQHP+LK 
Sbjct: 1   MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKA 60

Query: 61  FYKSNNNRVVCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 120
           FYK+NN RVVCVKN+DPEEI+  A RLRN+LGRKV+KLRTRHVTKNPSVQGTWNTDVRF
Sbjct: 61  FYKNNNERVVCVKNLDPEEINLHAVRLRNALGRKVIKLRTRHVTKNPSVQGTWNTDVRF 119

[Close]

BLAST of IVF0026191 vs. NCBI nr
Match: XP_008454040.1 (PREDICTED: 54S ribosomal protein L51, mitochondrial [Cucumis melo] >XP_008454041.1 PREDICTED: 54S ribosomal protein L51, mitochondrial [Cucumis melo])

HSP 1 Score: 250 bits (639), Expect = 6.01e-84
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKG 60
           MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKG
Sbjct: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKG 60

Query: 61  FYKSNNNRVVCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 119
           FYKSNNNRVVCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF
Sbjct: 61  FYKSNNNRVVCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 119

[Close]

BLAST of IVF0026191 vs. NCBI nr
Match: XP_004152128.1 (54S ribosomal protein L51, mitochondrial [Cucumis sativus] >XP_004152129.1 54S ribosomal protein L51, mitochondrial [Cucumis sativus] >KGN53023.1 hypothetical protein Csa_015078 [Cucumis sativus])

HSP 1 Score: 240 bits (612), Expect = 7.92e-80
Identity = 114/119 (95.80%), Postives = 117/119 (98.32%), Query Frame = 0


Query: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKG 60
           MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTEL RGQHP+LKG
Sbjct: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELIRGQHPHLKG 60

Query: 61  FYKSNNNRVVCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 119
           F++SNNNRVVCVKNMDPEEIHSCA RLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF
Sbjct: 61  FFRSNNNRVVCVKNMDPEEIHSCAMRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 119

[Close]

BLAST of IVF0026191 vs. NCBI nr
Match: XP_038877046.1 (54S ribosomal protein L51, mitochondrial [Benincasa hispida])

HSP 1 Score: 237 bits (604), Expect = 1.32e-78
Identity = 112/119 (94.12%), Postives = 116/119 (97.48%), Query Frame = 0


Query: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKG 60
           MALRGVWQLKKLVVSYCDWGGSSRGIRAFM+SQ+PAFKEKNPQLEVVTEL RGQHP+LKG
Sbjct: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMDSQLPAFKEKNPQLEVVTELIRGQHPHLKG 60

Query: 61  FYKSNNNRVVCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 119
           FYKSNNNRVVCVKNMDPEEIH CA RLRN+LGRKVVKLRTRHVTKNPSVQGTWNTDVRF
Sbjct: 61  FYKSNNNRVVCVKNMDPEEIHLCAMRLRNALGRKVVKLRTRHVTKNPSVQGTWNTDVRF 119

[Close]

BLAST of IVF0026191 vs. NCBI nr
Match: KAA0044551.1 (54S ribosomal protein L51 [Cucumis melo var. makuwa] >TYK17030.1 54S ribosomal protein L51 [Cucumis melo var. makuwa])

HSP 1 Score: 229 bits (584), Expect = 3.50e-75
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0


Query: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKG 60
           MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKG
Sbjct: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKG 60

Query: 61  FYKSNNNRVVCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRHVTKNPSVQ 110
           FYKSNNNRVVCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRHVTKNPSVQ
Sbjct: 61  FYKSNNNRVVCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRHVTKNPSVQ 110

[Close]

BLAST of IVF0026191 vs. NCBI nr
Match: XP_022979453.1 (54S ribosomal protein L51, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 224 bits (571), Expect = 1.42e-73
Identity = 102/119 (85.71%), Postives = 115/119 (96.64%), Query Frame = 0


Query: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKG 60
           MALRGVWQLKKL+VSYCDWGGSSRGIRAFM+S++PAF+EKNPQL++VTEL RGQHP+LKG
Sbjct: 1   MALRGVWQLKKLIVSYCDWGGSSRGIRAFMDSELPAFREKNPQLQIVTELIRGQHPHLKG 60

Query: 61  FYKSNNNRVVCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 119
           FYKSNN+RV+CVKNMDPE+IH  ATRLRN+LGRKV+KLRTRHVTKNPS QGTWNTDVRF
Sbjct: 61  FYKSNNHRVICVKNMDPEDIHLHATRLRNALGRKVLKLRTRHVTKNPSAQGTWNTDVRF 119

[Close]

BLAST of IVF0026191 vs. TAIR 10
Match: AT3G59650.1 (mitochondrial ribosomal protein L51/S25/CI-B8 family protein )

HSP 1 Score: 214.5 bits (545), Expect = 4.5e-56
Identity = 100/119 (84.03%), Postives = 110/119 (92.44%), Query Frame = 0


Query: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKG 60
           MALRGVWQLKKLVVSYC+WGGSSRGIRAFMES++PA KEKNPQLEV+TEL+RGQHPYLKG
Sbjct: 1   MALRGVWQLKKLVVSYCNWGGSSRGIRAFMESELPALKEKNPQLEVITELSRGQHPYLKG 60

Query: 61  FYKSNNNRVVCVKNMDPEEIHSCATRLRNSLGRKVVKLRTRHVTKNPSVQGTWNTDVRF 120
            Y++ N RVVCVKNMDPEE+   ATRLRNSLGRKVVKLRTRHVTK+PSVQGTW T V+F
Sbjct: 61  IYRNRNERVVCVKNMDPEEVLLNATRLRNSLGRKVVKLRTRHVTKHPSVQGTWTTAVKF 119

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BLAST of IVF0026191 vs. TAIR 10
Match: AT3G59650.2 (mitochondrial ribosomal protein L51/S25/CI-B8 family protein )

HSP 1 Score: 199.1 bits (505), Expect = 2.0e-51
Identity = 100/146 (68.49%), Postives = 109/146 (74.66%), Query Frame = 0


Query: 1   MALRGVWQLKKLVVSYCDWGGSSRGIRAFMESQMPAFKEKNPQLEVVTELNRGQHPYLKG 60
           MALRGVWQLKKLVVSYC+WGGSSRGIRAFMES++PA KEKNPQLEV+TEL+RGQHPYLKG
Sbjct: 1   MALRGVWQLKKLVVSYCNWGGSSRGIRAFMESELPALKEKNPQLEVITELSRGQHPYLKG 60

Query: 61  FYK---------------------------SNNNRVVCVKNMDPEEIHSCATRLRNSLGR 120
            Y                            + N RVVCVKNMDPEE+   ATRLRNSLGR
Sbjct: 61  IYSMYISPLLNTILIQRLLILAISLAQFIGNRNERVVCVKNMDPEEVLLNATRLRNSLGR 120

The following BLAST results are available for this feature:

BLAST of IVF0026191 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UUC8	4.6e-13	28.57	54S ribosomal protein L51, mitochondrial OS=Schizosaccharomyces pombe (strain 97...	[more]
Q758S3	5.1e-12	33.33	54S ribosomal protein L51, mitochondrial OS=Ashbya gossypii (strain ATCC 10895 /...	[more]
Q06090	1.8e-09	27.43	54S ribosomal protein L51, mitochondrial OS=Saccharomyces cerevisiae (strain ATC...	[more]
Q99N89	5.8e-08	32.73	39S ribosomal protein L43, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl43 PE=1...	[more]
Q8N983	3.8e-07	30.63	39S ribosomal protein L43, mitochondrial OS=Homo sapiens OX=9606 GN=MRPL43 PE=1 ...	[more]

BLAST of IVF0026191 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BXU0	7.7e-64	100.00	54S ribosomal protein L51, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494585...	[more]
A0A0A0KU37	1.0e-60	95.80	L51_S25_CI-B8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G0117...	[more]
A0A5A7TSM4	1.8e-57	100.00	54S ribosomal protein L51 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A6J1IW90	5.9e-56	85.71	54S ribosomal protein L51, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1DVX7	6.6e-55	86.55	54S ribosomal protein L51, mitochondrial OS=Momordica charantia OX=3673 GN=LOC11...	[more]

BLAST of IVF0026191 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008454040.1	6.01e-84	100.00	PREDICTED: 54S ribosomal protein L51, mitochondrial [Cucumis melo] >XP_008454041...	[more]
XP_004152128.1	7.92e-80	95.80	54S ribosomal protein L51, mitochondrial [Cucumis sativus] >XP_004152129.1 54S r...	[more]
XP_038877046.1	1.32e-78	94.12	54S ribosomal protein L51, mitochondrial [Benincasa hispida]	[more]
KAA0044551.1	3.50e-75	100.00	54S ribosomal protein L51 [Cucumis melo var. makuwa] >TYK17030.1 54S ribosomal p...	[more]
XP_022979453.1	1.42e-73	85.71	54S ribosomal protein L51, mitochondrial-like [Cucurbita maxima]	[more]

BLAST of IVF0026191 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G59650.1	4.5e-56	84.03	mitochondrial ribosomal protein L51/S25/CI-B8 family protein	[more]
AT3G59650.2	2.0e-51	68.49	mitochondrial ribosomal protein L51/S25/CI-B8 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007741	Ribosomal protein/NADH dehydrogenase domain	SMART	SM00916	L51_S25_CI_B8_2	coord: 18..91 e-value: 1.6E-18 score: 77.5
IPR007741	Ribosomal protein/NADH dehydrogenase domain	PFAM	PF05047	L51_S25_CI-B8	coord: 26..76 e-value: 2.5E-11 score: 43.3
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 1..118 e-value: 4.8E-44 score: 151.7
IPR039927	39S ribosomal protein L43/54S ribosomal protein L51	PANTHER	PTHR21396	39S RIBOSOMAL PROTEIN L43	coord: 1..117
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 8..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0026191.4	IVF0026191.4	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032543	mitochondrial translation
cellular_component	GO:0005762	mitochondrial large ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome