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IVF0026173 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTAGAAGGAAGCTCCCAAACGGGCATAGCCATGGCAGCTTGGGGTTTATAGGTTTTAGGGATATCGTTTCATTTTCAATTTCTTTGCACTTCCATCTCCTCTTTTCCTTTTTCACTTCTCCTTTCTTCTCCCATGGATACTTCTTTCAGATACGCCGGAGACTCCAGAGCCTTAAGAATCCACGCCAAGGAGAAGATTTCTCTCGACTCCAACATTTTCTTGCAGGTACACCATTTCCTTCTCTAACTTTCTCACTTAACCGTTTTAACTGTGTCTTTGGTTGGATTTATGCTCTGCTATCACATTGATTGGGAACCCTTGTGCTGATTTTGAAGAATTTTGGATTTTACAAACCTTTGTTCTTACATTGTTACATTTTCCCTTTTCTCTTCCTCGTTTAAAGGTTCGTGGCGAGCTAGATACAAGAATAGGAGAACCGAGTCTCCTCGCTGCTTCCGTTAGACAATTTAACCAGGATGTAAGGTTTTCTTGGCAACCAATTCAATTTCTGCAAGTCTTTGTTTTTCTATTTATTATTGTAAATCAAATGCAGTTGTCTGCAAGCGCGGGTTTAGGAGTGCAGTATGATAAATATAAGAAACTTCATTATGTTGGTCGTGGGAAAATGTCTTTTCCTGTGACTACCGATGGTTTGTTGAGATTTACTATTAAAGGGCAATCTCATCTTGACAAGGATTTTAAGCAGGTTAGTGATGAATGATTATATCTCAGGACACACACACACAAAAAAAAAAAAAGGCGTGAACTTGGTATTTCTTTTGTTTTCCTTTGCAACCAAACTTTGTTCCATTGTTTTCTTTGCAGATTAAGTACAAAGGAGCTGCTGAATTTTCTTTGGGTGTATTAAATTTTCAAAGGGAACAAGATGTAAGAGTCAAAGTAGGTTATGAAGTGTTCGAAAAGGTAGAGTAATTTACCCTTTTCTGTTTTTTAGTGGTCAGTTCAAGTGTTATGTCTTATCTTACATAAATTGAGTATATTTTCTTTCTATACTATACGTTATTTGATTGTCTCTATGTTATCTCATGATTTATTATCTTGTAGATATGCTCTAGTTAAGAAAAAGTCAGAACGATATAACAATTAAAAAAAAAATAGCTTAGAAGATCTCTTTGTATGTCATCCACATCTTAGCCCATCTTCCTTGTTCTTGGTAGTTGGTAGTCAACATAGGAATGAAATGTTGGCTTCTGGGGCCTTGAGGCGAGGGAACCTCTGTCTCCTTTTTCTTTTTCCACATTGGCTGTTGATTGGACTTAGATGGCTGTTGCCTGTTGGACAGGGGCATGGCTTCCAATTTGAATAAAGACAGAATCAAGTATTCGGGGAGGCATCATGTTCATTGTTCATATAAAAGCTTACAATAATGGCATAATCTTTTTCGGCATGAGAAATAAAAAGAAACTTGAGGACTGTTTCAAACTCAATGCCTATTAAGTATGTTACAATGAAGCTCTTTCATACTACAGGAACTTGCCCACTATAAACTTAGACATCCCGTGGCACGTATGTAAACACTAAACAGAGCTGAAATTTGGAGCTAGAGATGATATTTAACCAGCCCACTCTCCAAACTTCAAAGAATGTAGATTGACCCTCGCTTGAGTTGCCCTCTCAAATGAATCCTTAAAAAAAAAATAACAATAAGGAATTATTCAAAATATTAGCGAGCATCACATCCGAGACTTTCTTGCGGATTGTCAAATAGAGCAAATATTTGTCATCTGGTAAATAAGGAGACGGTCGCTTATTAGATGCAGAGCTTTATCTTTACCTGATAAAAGGAAAAAATTTAAAAGACTAAAGGTGCTTTTAGACATGGAGAAAGGATTTCTGGGTGTGGAGGCCTAATCCTTTAAAAAGATCCTCTTCCTCGAGTAGCTCCTTTTTTCCGTAGGTCTATTGATCATTTTCTATTAGTTGAGTCAATTTTTTCTGCTCTATAAATCGCCTTGTGAAGAAGATGCCTCGTTGATTGGTCTGGTTTACTATATTCTTTGTCGGAAGGCCAATGAAGACTTGAATCACATTCTCAGCAAGTGAGGATGGTCTGGCAAAAGACGGCTGCAAATGATGTCGAAGAAGAAAAATATTGGGAAATGGAGAAGAGGAGGAAAGCGGAAAAGAAAACCAAAATTTTGAAAATGCCACATAAACTAAAATTTATTATAAATTAATAAAATCGGTTTAAAATGTGTCTACACAACCATCCACAAATGGTCACACAAGGTTTTAGAAACTACCAAGCTTGGGACATAAAAGTATCCATTTTGAAACCAAAAATATGTAGTGCCGATTATTTTTGTAGCTTCATTTTGGAGTCTACTTCCAAAAGAATTTTAACCAATGCGGATTGGTGTAGTTTTTAGTCCCTTTATTTCTCTAGTTTAAACCTGGGGCTATATATCATTCATAACATGGCAGGGCAGCTTTACCCTTGCATATCATTAAGCAATTTTACTGGTCTGTTTTGCATTGTTGTATATTGAAACTCTCACTTAATTTCACCATTTTCATACAGATACCATACGTTCAGATCAGGGAAAATAACTGGACACTGAATGCTGACATCAATGGTAGATGGAATGTGAGATTCGACTTATGAGAAATAGAAGTTGAACTTTCTCCTTCATAAGTAGTAATTTCAGCTGCGGGATTCCTTTCTGAGATGTGTATTTACCTTCATTTCCATTGTTTCTATTCTATTCCGATAAGCATTGTCTCAACAATTTTTTAACGAATTGATACATTTTTCAAATCCTTTATAATCATTGTTATTATAACTTAGTTTTATGTTAAGTTTCATGCAACTCTTATGTAAGGCATGCGACTAAACTATTCAACTACCGAAGCAAATCACATAGACTTGGTA ATTAGAAGGAAGCTCCCAAACGGGCATAGCCATGGCAGCTTGGGGTTTATAGGTTTTAGGGATATCGTTTCATTTTCAATTTCTTTGCACTTCCATCTCCTCTTTTCCTTTTTCACTTCTCCTTTCTTCTCCCATGGATACTTCTTTCAGATACGCCGGAGACTCCAGAGCCTTAAGAATCCACGCCAAGGAGAAGATTTCTCTCGACTCCAACATTTTCTTGCAGGTTCGTGGCGAGCTAGATACAAGAATAGGAGAACCGAGTCTCCTCGCTGCTTCCGTTAGACAATTTAACCAGGATTTGTCTGCAAGCGCGGGTTTAGGAGTGCAGTATGATAAATATAAGAAACTTCATTATGTTGGTCGTGGGAAAATGTCTTTTCCTGTGACTACCGATGGTTTGTTGAGATTTACTATTAAAGGGCAATCTCATCTTGACAAGGATTTTAAGCAGATTAAGTACAAAGGAGCTGCTGAATTTTCTTTGGGTGTATTAAATTTTCAAAGGGAACAAGATGTAAGAGTCAAAGTAGGTTATGAAGTGTTCGAAAAGATACCATACGTTCAGATCAGGGAAAATAACTGGACACTGAATGCTGACATCAATGGTAGATGGAATGTGAGATTCGACTTATGAGAAATAGAAGTTGAACTTTCTCCTTCATAAGTAGTAATTTCAGCTGCGGGATTCCTTTCTGAGATGTGTATTTACCTTCATTTCCATTGTTTCTATTCTATTCCGATAAGCATTGTCTCAACAATTTTTTAACGAATTGATACATTTTTCAAATCCTTTATAATCATTGTTATTATAACTTAGTTTTATGTTAAGTTTCATGCAACTCTTATGTAAGGCATGCGACTAAACTATTCAACTACCGAAGCAAATCACATAGACTTGGTA ATGGATACTTCTTTCAGATACGCCGGAGACTCCAGAGCCTTAAGAATCCACGCCAAGGAGAAGATTTCTCTCGACTCCAACATTTTCTTGCAGGTTCGTGGCGAGCTAGATACAAGAATAGGAGAACCGAGTCTCCTCGCTGCTTCCGTTAGACAATTTAACCAGGATTTGTCTGCAAGCGCGGGTTTAGGAGTGCAGTATGATAAATATAAGAAACTTCATTATGTTGGTCGTGGGAAAATGTCTTTTCCTGTGACTACCGATGGTTTGTTGAGATTTACTATTAAAGGGCAATCTCATCTTGACAAGGATTTTAAGCAGATTAAGTACAAAGGAGCTGCTGAATTTTCTTTGGGTGTATTAAATTTTCAAAGGGAACAAGATGTAAGAGTCAAAGTAGGTTATGAAGTGTTCGAAAAGATACCATACGTTCAGATCAGGGAAAATAACTGGACACTGAATGCTGACATCAATGGTAGATGGAATGTGAGATTCGACTTATGA MDTSFRYAGDSRALRIHAKEKISLDSNIFLQVRGELDTRIGEPSLLAASVRQFNQDLSASAGLGVQYDKYKKLHYVGRGKMSFPVTTDGLLRFTIKGQSHLDKDFKQIKYKGAAEFSLGVLNFQREQDVRVKVGYEVFEKIPYVQIRENNWTLNADINGRWNVRFDL Homology
BLAST of IVF0026173 vs. ExPASy Swiss-Prot
Match: Q9SM57 (Outer envelope pore protein 21, chloroplastic OS=Pisum sativum OX=3888 GN=OEP21 PE=1 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 7.5e-54 Identity = 99/177 (55.93%), Postives = 128/177 (72.32%), Query Frame = 0
BLAST of IVF0026173 vs. ExPASy Swiss-Prot
Match: Q9FPG2 (Outer envelope pore protein 21B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP21B PE=2 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 2.1e-48 Identity = 85/167 (50.90%), Postives = 121/167 (72.46%), Query Frame = 0
BLAST of IVF0026173 vs. ExPASy Swiss-Prot
Match: Q6ID99 (Outer envelope pore protein 21A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP21A PE=2 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 4.7e-48 Identity = 87/167 (52.10%), Postives = 119/167 (71.26%), Query Frame = 0
BLAST of IVF0026173 vs. ExPASy Swiss-Prot
Match: B8AFI8 (Outer envelope pore protein 21, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=OEP21 PE=3 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 1.4e-28 Identity = 71/187 (37.97%), Postives = 100/187 (53.48%), Query Frame = 0
BLAST of IVF0026173 vs. ExPASy Swiss-Prot
Match: Q6K965 (Outer envelope pore protein 21, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=OEP21 PE=2 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 1.4e-28 Identity = 71/187 (37.97%), Postives = 100/187 (53.48%), Query Frame = 0
BLAST of IVF0026173 vs. ExPASy TrEMBL
Match: A0A1S3CMW4 (outer envelope pore protein 21, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502611 PE=3 SV=1) HSP 1 Score: 340.9 bits (873), Expect = 3.0e-90 Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0
BLAST of IVF0026173 vs. ExPASy TrEMBL
Match: A0A0A0KGQ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G355410 PE=3 SV=1) HSP 1 Score: 327.8 bits (839), Expect = 2.7e-86 Identity = 159/167 (95.21%), Postives = 162/167 (97.01%), Query Frame = 0
BLAST of IVF0026173 vs. ExPASy TrEMBL
Match: A0A6J1DGN6 (outer envelope pore protein 21, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111020697 PE=3 SV=1) HSP 1 Score: 296.2 bits (757), Expect = 8.6e-77 Identity = 138/167 (82.63%), Postives = 158/167 (94.61%), Query Frame = 0
BLAST of IVF0026173 vs. ExPASy TrEMBL
Match: A0A6J1KSM1 (outer envelope pore protein 21, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496077 PE=3 SV=1) HSP 1 Score: 282.0 bits (720), Expect = 1.7e-72 Identity = 138/167 (82.63%), Postives = 149/167 (89.22%), Query Frame = 0
BLAST of IVF0026173 vs. ExPASy TrEMBL
Match: A0A6J1GHG8 (outer envelope pore protein 21, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454002 PE=3 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 2.4e-71 Identity = 135/167 (80.84%), Postives = 149/167 (89.22%), Query Frame = 0
BLAST of IVF0026173 vs. NCBI nr
Match: XP_008464824.1 (PREDICTED: outer envelope pore protein 21, chloroplastic [Cucumis melo]) HSP 1 Score: 338 bits (866), Expect = 5.28e-117 Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0
BLAST of IVF0026173 vs. NCBI nr
Match: XP_004144247.1 (outer envelope pore protein 21, chloroplastic [Cucumis sativus] >KGN47522.1 hypothetical protein Csa_019071 [Cucumis sativus]) HSP 1 Score: 325 bits (832), Expect = 8.10e-112 Identity = 159/167 (95.21%), Postives = 162/167 (97.01%), Query Frame = 0
BLAST of IVF0026173 vs. NCBI nr
Match: XP_038884931.1 (outer envelope pore protein 21, chloroplastic [Benincasa hispida]) HSP 1 Score: 300 bits (769), Expect = 3.27e-102 Identity = 148/166 (89.16%), Postives = 155/166 (93.37%), Query Frame = 0
BLAST of IVF0026173 vs. NCBI nr
Match: XP_022153118.1 (outer envelope pore protein 21, chloroplastic [Momordica charantia]) HSP 1 Score: 293 bits (750), Expect = 2.58e-99 Identity = 138/167 (82.63%), Postives = 158/167 (94.61%), Query Frame = 0
BLAST of IVF0026173 vs. NCBI nr
Match: XP_023002118.1 (outer envelope pore protein 21, chloroplastic-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 279 bits (713), Expect = 1.12e-93 Identity = 138/167 (82.63%), Postives = 149/167 (89.22%), Query Frame = 0
BLAST of IVF0026173 vs. TAIR 10
Match: AT1G76405.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G20816.1); Has 52 Blast hits to 52 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 193.4 bits (490), Expect = 1.5e-49 Identity = 85/167 (50.90%), Postives = 121/167 (72.46%), Query Frame = 0
BLAST of IVF0026173 vs. TAIR 10
Match: AT1G20816.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76405.2); Has 52 Blast hits to 52 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 192.2 bits (487), Expect = 3.4e-49 Identity = 87/167 (52.10%), Postives = 119/167 (71.26%), Query Frame = 0
BLAST of IVF0026173 vs. TAIR 10
Match: AT1G76405.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G20816.1); Has 38 Blast hits to 38 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 60.8 bits (146), Expect = 1.2e-09 Identity = 26/53 (49.06%), Postives = 37/53 (69.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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