IVF0026124 (gene) Melon (IVF77) v1

Overview


Name	IVF0026124
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	RNA-directed DNA polymerase-like protein
Location	chr04: 6719511 .. 6727639 (+)
RNA-Seq Expression	IVF0026124
Synteny	IVF0026124

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTACACCTTGCAGTGCATCTTATAAGAGAAATTGAGTTTTGTGGACCTGATCATTTAAGGTGGATGTATCCTTTTGAACGATATATAAAAGTCCTAAAAGCTTATGCACGAAATAGAAATCGACCAGAAGAATGTATGGTAGAAAATTATATTGTTGAAGAGGTTATAAAGTTCCGTTATGAATTTATTGTTGGAGTTAGTTCTATTGGACTTAACTCATCTATAATTACAAGGGATTCAAACGTGGATAGAACATTATCGGCTTCTTCTTTTATCAGACTGAGTAAAGAGCAGTTAGATCAAGCTCATCTTTACGTCATTCAAAATGTAAATAATGTTCTACCATATGTCGAGTACGTGCTAACCCTATCTATTCTCATTCTACATAAATTGGGTATGTAATAACTTAATAACTTGTCATTTCTGACAGACAACATAGGGAGAGTTTGTGTAAGCTTAACTCTAGTAAAGCTCAAAGTAAAAAGTGGATTGAAGAAAAGCATAATCGCTCATTCAGTCGGTGGTTATCCACACAGGTAATCACTAGAATCATACTCTTTCATGTTTGTTTATGATCTAACTAAATCCAATATATTGTGTAGGTTGCACTTGCTCTCAAAGTACCTAAAAATTCCATCACGCCTTCTTTAAGATGGATAGCTCACGGACCTTCTCTAGATGTGGCCACTTATTCTGGTTACATGATTAATGGTTATTACTATCACACAAAAAAGCATGATGATATTAGGAGAGTTCAAAATAGTGGAGTTAGTATAATTGCTACTACAATGCAAGTCTCTAGTTCTAAGGACAAAAATCCTCTGCTCTGTCAGATATGACGTTTTATGGTGTGATACAGGAGATATGGGAGATCGATTACCATCAATTATTATTTATTTTATTTAAGTGTGATTGGGTTGACAATAGAAGTGGAGTCAAAATGGACAAGCTTGGGTTTACCATCATGGATCTCAAACGTATTGGGCATAAATCAAAGTCATTTATTTTAGTCACTCAAGCAAAACAAGTATTCTATGTCCAAGATTCTTCAAATCCTGAATGGTTGGTGGTTTTAACATCTCCATAAAGAACTATTGAAAAAGATTCTTTGAAGATGAAATACGAGATATGCTTCAAAAGTGTAGTTATGGAACCATTCAAAGGATGCCCGATGTCAATACACCTAATGAGACTGATGATACAACTTCAACTTATATTAGACATGATTGTGAGGGTAGATGGGTAGAAAAGGGTATGTCATTACTTTGCTTTAAAATCTATTTATGTTTAGAGTTCGTAATATAATTGATATGCTTATGGTATGTCATTACTTTGGTTTATAATGTATTTATGTTTAGAGTTCGTAATATAATTGTTGTATTTATGGTATGTCACTTTATAATGTATTTAACTTTAAGTTCGTGACATAATTGCTATACTTATGTATGTTGACTTTGCTTACTAATGTATGTCTGTTTTTTATCGATTCATAGATGGAGGATAGCAATAAGGATGAAAGAGAAATGCTTCCAGAAGTAAGAAAGAAATCATTTGTTCCACGTGAGCCAACTACTATGTTTGAGTTTGCATTAGTGAGAAATTCATGACAAAAGTTGCCCATTCAATTTAATATTAGAAAAGTTGTTTGTTTTATCTTTTAGATTATATTTTACTCATATACGAGTAATTGAAACATATGCAACAATGAACTTGAAGCTCATAGACATATTTGCAATTTGGCATAATCAATTGGGTCATCCAGGATCCATAATAATGAGAAGAATTATTGAAAATTCACATGGATATCCATCGAAGAACCTGAAGATTCTTCAATCTAATGAATTATCATGTAATGCTTGCTCTCAAGGAAAATTAATAATTGGACAATCACCAGCTAAAGTGGGAATCGAGTCTCCTACACTTTAGGAATGAATTCATGGTTATATTTGTGGATCGATTCACTCACTAAGTTGACCATTTAAGTATTTTATGGTCATAATAGATACATCCAACAGATGGTCACATGTGTGCTTGTTATTAACTTAAGAGCACAGTTTCCTGATTATACAATTAAGAATATTTGACTTGGTAATGCTAGTGAATTTACATTCCAAACATTTGATAATTATTGTATGTCTATTGGGATAACTGTTGAACATCCATATTCACACGAGATTTTTGAAGAAATTTGATTCGTGGAATTTAACTTGTATTTATGTTGTATTTATGTTGATTTGATGAGGTGTGGTTCGATCTCTAGAATTTGATCATCCGATTCTCTCTCGGTTGGATACTTACACTTGATTTGAAAAAGCGGAGCACATGTTGTTCTTGAAGTTGGAGTATTGGAAGAACGCTTGTATCTTTAAAGGAGCTTCAATCTTCAAGGGTGCTCGATAGTAGGAGTTAGGGAGTCTTCTGGTTCTTGGGAGAATTCTCTCTATACCTTTTGGAGTAAAAGATTTTTTCTCCGCAAATGAAGAAAACTCTTCTATTTATAGAGTTCCTTGGTGGGCTTTTATGAACTTGTGCCTCGTCAGTCAATGGACCAGACCCATGAGCTCAATCACATGGATTTGAGTTATATTTAACTTTAGTCTAAATTAAGCTTATTTTTAGGCTCAATTGAATTTTAGCCCAAGTAAATAATATTTAATTGAATCGAAATAATTAATTTGATCCAATTGTCATAATAAAGACATGTGACATCATTAGAATTGGCCAATTTGTCTTTAAATTTAATTTGGGACACATGCCAATTTTTAATTAATTCCAAATGCAATTATTTAAGTAAATGACGTGACAATTTTTGATTGGTTCAAAAATTTCTTATTTGACAATCCTGTAGCTCATGTTCATACACATAATGGTTTAGCAGAATCATTTATAAAACGTTTGCAATTAATTACTTAACCAGTGCTTATAGGAGTTGAACTCCCTACATATGTATGGGGACATCCTATTTTGCATGTTGCATCACTTGTGCGTATTAGGCCAACAACTTATCCCAAGTACTTGTCATTTCAATTAGCATATGGTCAAAAGCTAAATATTTCTCATTTTTGAATTTTTGGATGTACAATATATGTTCCAATAGTTGGTCCACAACAATGTACTAAGATGGGTCCTCAAATGAGGCTAGGAATATATGTTGGATTTGATTCCAGCTCATTAATTATTAAATATCTTGAACCCTTACGAGTGATGCATTTATTGCATAATTTATTGATTGTCATTTTAATGAGACAAATTTTCCAACATTAAGGGAAGGAATTAAGAAGTTTGATAAAGAAATTACATGCAATGTATCTTTATTGTCTCATTTAGATCCTCGTACAGATCAATGTGAACTTGAAGTACAAAAAATAATTCATTTGCAAAATATAGCAAATCAGTTATCTTATGCATTTATACATACAAAGAAAGTAACTAAATCACATTTGACATCCCTACACAACATGTTGTTATTCATGAATCTAGAACACGCCAGAAGTGTGGTAGACTAGTAGGTTTCAAAAATAGAAATCCTCGAAAAAGAATCGAGTCAATAACTCGATTAAATATGTGGATGTTCTAGGAGAAATCCAAAATTTTACTCTTGACAAAAATGTTGAATAAAATAAAACAACCGAGGATAATTATGAGATCTTGATAAACTATGTCATGACAGAAAAAAGATTGAACTGAACTAATGTAGTTGTTGACAACATTTTTGCATATAATGTTGCTCTTGATATTGTATCAGAAAATGAGGATACTAAACCAAAATATGTTCAAGAATGTCGACATAAAAAAACATTGATTTTTGTGGAAAGAAGCAATTGAGGCAGAACTAAATTCAATTTCATAATGTCATATTTTTGGACCAGTAGTCCAAACACCATAAGGTGTCAAAACATGTGGGATATAAATGGGTATTTGTGAGAAAAAGAAATGAAAATAATAAGATCACAAGATACAAAGGAAGAATGGTTGCATAAGGTTTTTCACAAAGACCTGGTATTGATTATGAGGAGATATATTCTCATAGTAGTTTGCTCCATAGGAATTAAGACAGAGTAGTTAGCTCTAAGAAGAAACTGAAAAGTAAATAGTTGGAAGTTAAAGTTAATTTAGAGGGAACTAATGAAGTATGGACTATGTAACGAAAGAAGTACAGTAATGATTAATATGTGAGTAGACATTTAGTATCATGCATTTGAGTTAAGTATTTATAGTATGTCTAATGTGTTGACATTTTATAGGAGTCATGCCACCACGTACTAGTAGACGACTCAGACAGAATCAAGCCGAGATGAAGGGTCCTACCGAGGGTCAATCTATAGGGAAATTTAGTACCCCAAGAGTTCAGGTTGGGGCGAGAAACAAGCGGTTTACGAGAACTACAAAGAAGATAGGAAGGCCAAAGAGAGCAGAGCCTAGTAATCCAGAAAAGGCATGCGGAATTAAACAGCTAAGGAAGTTAGGGGCCACAGTGTTTGAGGGTTCCACAAATCCAACTGATGTGAAGGAGTGGTTGAATATGCTTGAAAAATGTTTTGACGTGATGAATTATTTTGAGGAACGGAAAGTCAGATTGGCCACATTTTGTTGTAGAAGAAGGCTGAAGGATGATGGAAATCCATATTAGCAAGGTGCAGTGATGCAGGTACTTTAGACTGGTAGACCTTTAGAGGCATATTCGAAGATAAGTATTATCACAACACATACTGTGAGGCCAAGAGGGATGTGTTTCTGGGGTTGAAACAAGGATCACTTTCAGTGGTCAAGTACGAGAGAAAGTATATTGAGATTTTACGATATTTTGATGTTATTTGAGCATCTGAGAGTGACAGGTGCCAAAGGTTTGAAAGAGGGTTGTGTTTTGAAATATTAACCCAGTTACAGTAATTGCTAAGTGGACAGATTTTTCTCGTTTAGTGGAGACTGCCCTTTGAGTGGAGTAGAGTTTAACTGAAGAGAAGTCAGTAGTGGAGCTTAGTCATTAGGGCTTCAACAGGTAGCGATTTTAGAGGCCATGAGCAGCAGTGGTTCACGCCTGGCGTAAATATTTCAAGTCGTAAAGAATTAAGAAACGGTCTAGAGGCCAAGCATTGAGGAACATGAATTATGGTAGTGTTTATTAGAGGCAGAGTCAGAGCATGTCTTGTCAATCTACTAGATCAATAGTAAGATCGTAGACAAATCAGGAGTCTGTTGCTAGTATAGTCAGGCCAACCCCATGCACGAGTTATAGTAGGAATCATCGAGGTTAGTGTCTTATGGATGCTGGTGTGTGTTACCAATGTGAACAGCAAGAACATTTCAAGAAAGATTGCCTGTAGTATAACACAACAGTTTAGAGGGATCAGGGAGTTGTGTCCTAGAAAGTTGAGTAATCAAGAGTTTCAATGGTTCCGACAGAGGGCACCAGCAATGCAAAGCACAAGGGAGTTCTTGGATGACCTAGGAAACAGGAAAGTTCTACGTTATGACTCAATAAGAAGTAGAGGATGCACCAGACATTATTACTAGTACGATTCTTATTTACAATGTACCTTCAGTTGTTTTATTTGATTTAGGTGCCATGCACTCTTTTGTTTCTAGTATATTTCTGACTAAGCTGAATAGGATTTTAGAGCCTTTATCTGAGGGGTTAGCTATATACACTCTAGTCGGTGATTTTTTACTTGTCAGGTTTTAGTGCAAGGTATAGGTATGCTAGTGGATTTGCTACCACTAGAGTTATAGATGCTAGATGTAAGTTTAATAATGGATTTCTTATTTACTCACTATGCATCTATTGATTGTCATAAGAAGGAAGTTTTTTTAAAAAAAAACAGGCTTTGCTGAAGTGGTTTTTAGATGTATGAGGAAGATCATTCATAGGTGTTTAATCTCAGTTTTGAAAGTTGAGAAATTACTGAGGAAAGGTTGTACAACATTTCTTCCACAGTGGTTGAAGTGCAGAGAGAAAAGCGGAAGCCAGAAGATGTTCCTATGGTGAAAGAGTTTCTTGATGTACTTCCAAACGATCTGACAAATTTGCCACCTAATAGAGAGATCGAGTTCACTGTTAAATTATTATCAGGGACAGCACCTACTTCACAGGCACCGTACAAAATGGCTCGAAGTGAGCTTAAAGAGCTGAAGGTGCAGTTACAAAAATTGGTTGACAAGGGATACATTAGGCATAATGTACTGCGTCGGAGAGCGGTACCAGTATTATTGTAAACCTGAGATTTCCCTAGGATCATTTTCTCTTGTCATCTATTGTTGAGATTACTAAGTTAAAAAAAAAAGAAAAAAAAAAGAAAGAAAAGAGAAGAAAGGAAGTGGAATTGGACAGCAAAGCCCACCATCGCAAGTTCATTTTTTCAGCCCCATTTCATTTCTTTCCTCCATCATTTTCCATCAAAACTTTCAGAGTACTTTGAGGAGAGAGTGAAGGAAGAAGAAGAAGAAGAATTTCGTGGTTTGAGATTGAAGAAGATAGGAAAAAGTTCATGCAACTGTCAACCTCTGGTTGTTTTGTTCGGTTTAAGCTATCTAGAAGGAACTAAGAGGTGAGGTTTGATTTTCTTGAAAGTTAGTTCATTTTCCAATAAATTTCATGAAGGAAGCTTGAGTTGAATAGTATGAGAAGTTAATGATTTTTGAAATGGAAAAAAGAGCACAGGATTTTCGAGCAAACTAGGAGGATTTCTGGTGTTCTCTGATGCTTTGAGTATTCTAGAAGTACACAAGTCGAATCCAAAGCTCTATTTCATATGGTTAGAAAGCTTATTCAATATCCTACAACGTTTATGAAGATTTTGTGAGCTAAAATTGACTTTATGTGGGGTTAATTACAGGAGATAGATAAGGAGTGGTAGAGAACCTCGAATTCTGTATTGTCTGTGTTCGGGGCAATTCTGGACGAATTAGTTGAGAATCTCGTTTTCATTTCTTCAGGTAGGTTGTAGAGTGTTCGAAGATGAAGATTTGTATGTGTATTTCATTAATTTTGGTTAATTTGTGAGGAAGTTATGGATGTTGGAAGTTAGAATATCGAATCTGGAAAATATGAAAATGTGGGTTGTAATGTGATTCTTAATTAATTGTTTAGAAATTCATGAGTATGGAAGGACAAAACCTATCTATGATTCTAATGCTCGGTTTTGGTTGTTGACAGGCCAAGAGGAAATAGGCCGAGTCTACAAACCGGGAAACTAGATAAGACGGTGAGTGACAAAACAATTTCTAAAATGTTATTAAACAGTTATTTATAACTACATGTTTTACATGTTTTTCTATGAATGATACATGTTTTTGTAAACGGTTTCAAACATGAGTTTTGAGCTTAGATTTTCTAATGAGGGTTATATTCGAGCACGTGGCTAATGGCTTAATGAAAAGTAGTTGAAACAATATCTTTTAAAGTAAAGCATGTGTTAGCAAATATTGTATAATGATTTAAAGTTTTTCACGAGCAAACTGAATAAACTTGAGTTTTACAAAAGATAACGATAAACAGGCATGTTTAAATGTTTTCATGTGACTTCACGGAGCTTTCCATTGATTACATGACTGAAATATTGAGCCTGAGGCTATATGGTACCGTGTGCACACAGGTTATATTTCCGTTGTTGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGATGGGCGGGCCCCACTACGACAAAGACGATGGGAGTGTCGGGTGGGCCCCACTACATCGTAGGACTAGTAAACGTTGATTGTACTGGGCGTGCCCTACACCACGTAGATCGGTCATGTTAGTTAAAACGTTTGATGTACTTGTTATGCTTTGTTAGATTTTTTTATGATGAACTTGGAAGATATTTTAGGAAACCTTATTTATTACATGTTTATGTTAAATGCTTTGTTTGAGCATATTTATATGTCTAAAGGTTTATCACATGTTCTGACGTCCGGATTTAGAGTTTTAAATTTAGTCACTCACTGGGCCTCGTAGCTCATTCTTTTCAAAATGTTTCCCACTTTTCAGGTAGAGATTGAGCTCCTGGTGTCTGATACACTACCAATGTCTGCTGAAAGTTTCGAATCAAACTCCAGTACGTGGTTGGAGTTGTATTTTGAGTCTGTTCATGTTGAAATGTTTTGTAAGGTTTAA

mRNA sequence

ATGGTACACCTTGCAGTGCATCTTATAAGAGAAATTGAGTTTTGTGGACCTGATCATTTAAGGTGGATGTATCCTTTTGAACGATATATAAAAGTCCTAAAAGCTTATGCACGAAATAGAAATCGACCAGAAGAATGTATGGTAGAAAATTATATTGTTGAAGAGGTTATAAAGTTCCGTTATGAATTTATTGTTGGAGTTAGTTCTATTGGACTTAACTCATCTATAATTACAAGGGATTCAAACGTGGATAGAACATTATCGGCTTCTTCTTTTATCAGACTGAGTAAAGAGCAGTTAGATCAAGCTCATCTTTACGTCATTCAAAATGAGATATGGGAGATCGATTACCATCAATTATTATTTATTTTATTTAAGTGTGATTGGGTTGACAATAGAAGTGGAGTCAAAATGGACAAGCTTGGGTTTACCATCATGGATCTCAAACGTATTGGGCATAAATCAAAGTCATTTATTTTAGTCACTCAAGCAAAACAAGTATTCTATGTCCAAGATTCTTCAAATCCTGAATGTTATGGAACCATTCAAAGGATGCCCGATGTCAATACACCTAATGAGACTGATGATACAACTTCAACTTATATTAGACATGATTGTGAGGGTAGATGGGTAGAAAAGGGAGTCATGCCACCACGTACTAGTAGACGACTCAGACAGAATCAAGCCGAGATGAAGGGTCCTACCGAGGGTCAATCTATAGGGAAATTTAGTACCCCAAGAGTTCAGGTTGGGGCGAGAAACAAGCGGTTTACGAGAACTACAAAGAAGATAGGAAGGCCAAAGAGAGCAGAGCCTAGTAATCCAGAAAAGGCATGCGGAATTAAACAGCTAAGGAAGTTAGGGGCCACAGTGTTTGAGGGTTCCACAAATCCAACTGATGTGAAGGAGTGGTTGAATATGCTTGAAAAATGTTTTGACGTGATGAATTATTTTGAGGAACGGAAAAGGGCACCAGCAATGCAAAGCACAAGGGAGTTCTTGGATGACCTAGGAAACAGGAAAGTTCTACGTTATGACTCAATAAGAAGTTTTAGTGCAAGGTATAGGTATGCTAGTGGATTTGCTACCACTAGAGTTATAGATGCTAGATTGGTTGAAGTGCAGAGAGAAAAGCGGAAGCCAGAAGATGTTCCTATGGTGAAAGAGTTTCTTGATGTACTTCCAAACGATCTGACAAATTTGCCACCTAATAGAGAGATCGAGTTCACTGTTAAATTATTATCAGGGACAGCACCTACTTCACAGGCACCGTACAAAATGGCTCGAAGTGAGCTTAAAGAGCTGAAGGTGCAGTTACAAAAATTGGTTGACAAGGGATACATTAGGCATAATGTACTGCGTCGGAGAGCGCCCCATTTCATTTCTTTCCTCCATCATTTTCCATCAAAACTTTCAGAGTACTTTGAGGAGAGAGTGAAGGAAGAAGAAGAAGAAGAATTTCGTGGTTTGAGATTGAAGAAGATAGGAAAAAGTTCATGCAACTGTCAACCTCTGGTTGTTTTGTTCGGTTTAAGCTATCTAGAAGGAACTAAGAGGCCAAGAGGAAATAGGCCGAGTCTACAAACCGGGAAACTAGATAAGACGGTTATATTTCCGTTGTTGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGATGGGCGGGCCCCACTACGACAAAGACGATGGGAGTGTCGGGTAGAGATTGAGCTCCTGGTGTCTGATACACTACCAATGTCTGCTGAAAGTTTCGAATCAAACTCCAGTACGTGGTTGGAGTTGTATTTTGAGTCTGTTCATGTTGAAATGTTTTGTAAGGTTTAA

Coding sequence (CDS)

ATGGTACACCTTGCAGTGCATCTTATAAGAGAAATTGAGTTTTGTGGACCTGATCATTTAAGGTGGATGTATCCTTTTGAACGATATATAAAAGTCCTAAAAGCTTATGCACGAAATAGAAATCGACCAGAAGAATGTATGGTAGAAAATTATATTGTTGAAGAGGTTATAAAGTTCCGTTATGAATTTATTGTTGGAGTTAGTTCTATTGGACTTAACTCATCTATAATTACAAGGGATTCAAACGTGGATAGAACATTATCGGCTTCTTCTTTTATCAGACTGAGTAAAGAGCAGTTAGATCAAGCTCATCTTTACGTCATTCAAAATGAGATATGGGAGATCGATTACCATCAATTATTATTTATTTTATTTAAGTGTGATTGGGTTGACAATAGAAGTGGAGTCAAAATGGACAAGCTTGGGTTTACCATCATGGATCTCAAACGTATTGGGCATAAATCAAAGTCATTTATTTTAGTCACTCAAGCAAAACAAGTATTCTATGTCCAAGATTCTTCAAATCCTGAATGTTATGGAACCATTCAAAGGATGCCCGATGTCAATACACCTAATGAGACTGATGATACAACTTCAACTTATATTAGACATGATTGTGAGGGTAGATGGGTAGAAAAGGGAGTCATGCCACCACGTACTAGTAGACGACTCAGACAGAATCAAGCCGAGATGAAGGGTCCTACCGAGGGTCAATCTATAGGGAAATTTAGTACCCCAAGAGTTCAGGTTGGGGCGAGAAACAAGCGGTTTACGAGAACTACAAAGAAGATAGGAAGGCCAAAGAGAGCAGAGCCTAGTAATCCAGAAAAGGCATGCGGAATTAAACAGCTAAGGAAGTTAGGGGCCACAGTGTTTGAGGGTTCCACAAATCCAACTGATGTGAAGGAGTGGTTGAATATGCTTGAAAAATGTTTTGACGTGATGAATTATTTTGAGGAACGGAAAAGGGCACCAGCAATGCAAAGCACAAGGGAGTTCTTGGATGACCTAGGAAACAGGAAAGTTCTACGTTATGACTCAATAAGAAGTTTTAGTGCAAGGTATAGGTATGCTAGTGGATTTGCTACCACTAGAGTTATAGATGCTAGATTGGTTGAAGTGCAGAGAGAAAAGCGGAAGCCAGAAGATGTTCCTATGGTGAAAGAGTTTCTTGATGTACTTCCAAACGATCTGACAAATTTGCCACCTAATAGAGAGATCGAGTTCACTGTTAAATTATTATCAGGGACAGCACCTACTTCACAGGCACCGTACAAAATGGCTCGAAGTGAGCTTAAAGAGCTGAAGGTGCAGTTACAAAAATTGGTTGACAAGGGATACATTAGGCATAATGTACTGCGTCGGAGAGCGCCCCATTTCATTTCTTTCCTCCATCATTTTCCATCAAAACTTTCAGAGTACTTTGAGGAGAGAGTGAAGGAAGAAGAAGAAGAAGAATTTCGTGGTTTGAGATTGAAGAAGATAGGAAAAAGTTCATGCAACTGTCAACCTCTGGTTGTTTTGTTCGGTTTAAGCTATCTAGAAGGAACTAAGAGGCCAAGAGGAAATAGGCCGAGTCTACAAACCGGGAAACTAGATAAGACGGTTATATTTCCGTTGTTGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGATGGGCGGGCCCCACTACGACAAAGACGATGGGAGTGTCGGGTAGAGATTGAGCTCCTGGTGTCTGATACACTACCAATGTCTGCTGAAAGTTTCGAATCAAACTCCAGTACGTGGTTGGAGTTGTATTTTGAGTCTGTTCATGTTGAAATGTTTTGTAAGGTTTAA

Protein sequence

MVHLAVHLIREIEFCGPDHLRWMYPFERYIKVLKAYARNRNRPEECMVENYIVEEVIKFRYEFIVGVSSIGLNSSIITRDSNVDRTLSASSFIRLSKEQLDQAHLYVIQNEIWEIDYHQLLFILFKCDWVDNRSGVKMDKLGFTIMDLKRIGHKSKSFILVTQAKQVFYVQDSSNPECYGTIQRMPDVNTPNETDDTTSTYIRHDCEGRWVEKGVMPPRTSRRLRQNQAEMKGPTEGQSIGKFSTPRVQVGARNKRFTRTTKKIGRPKRAEPSNPEKACGIKQLRKLGATVFEGSTNPTDVKEWLNMLEKCFDVMNYFEERKRAPAMQSTREFLDDLGNRKVLRYDSIRSFSARYRYASGFATTRVIDARLVEVQREKRKPEDVPMVKEFLDVLPNDLTNLPPNREIEFTVKLLSGTAPTSQAPYKMARSELKELKVQLQKLVDKGYIRHNVLRRRAPHFISFLHHFPSKLSEYFEERVKEEEEEEFRGLRLKKIGKSSCNCQPLVVLFGLSYLEGTKRPRGNRPSLQTGKLDKTVIFPLLTLSVLRDNDAVVSDGRAPLRQRRWECRVEIELLVSDTLPMSAESFESNSSTWLELYFESVHVEMFCKV

Homology

[Close]

BLAST of IVF0026124 vs. ExPASy TrEMBL
Match: A0A5D3BI39 (RNA-directed DNA polymerase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold156G00050 PE=4 SV=1)

HSP 1 Score: 535.4 bits (1378), Expect = 3.1e-148
Identity = 301/410 (73.41%), Postives = 304/410 (74.15%), Query Frame = 0


Query: 216 MPPRTSRRLRQNQAEMKGPTEGQSIGKFSTPRVQVGARNKRFTRTTKKIGRPKRAEPSNP 275
           MPPRTSRRLRQNQAEMKGPTEGQSIGKFSTPRVQVGARNKRFTRTTKKIGRPKRAEPSNP
Sbjct: 1   MPPRTSRRLRQNQAEMKGPTEGQSIGKFSTPRVQVGARNKRFTRTTKKIGRPKRAEPSNP 60

Query: 276 EKACGIKQLRKLGATVFEGSTNPTDVKEWLNMLEK-CFDVMNYFEE-------------- 335
           EKACGIKQLRKLGATVFEGSTNPTDVKE  N+  K    +   F                
Sbjct: 61  EKACGIKQLRKLGATVFEGSTNPTDVKECKNISRKIACSITQQFRGIRELCPRKLSNQEF 120

Query: 336 ---RKRAPAMQSTREFLDDLGNRKVLRYDSIRSFSARYRYASGFATTRVIDARLVEVQRE 395
              R+RAPAMQSTREFLDDLGNRKVLRYDSIRSFSARYRYASGFATTRVIDARLVEVQRE
Sbjct: 121 QWFRQRAPAMQSTREFLDDLGNRKVLRYDSIRSFSARYRYASGFATTRVIDARLVEVQRE 180

Query: 396 KRKPEDVPMVKEFLDVLPNDLTNLPPNREIEFTVKLLSGTAPTSQAPYKMARSELKELKV 455
           KRKPEDVPMVKEFLDVLPNDLTNLPPNREIEFTVKLLSGTAPTSQAPYKMARSELKELKV
Sbjct: 181 KRKPEDVPMVKEFLDVLPNDLTNLPPNREIEFTVKLLSGTAPTSQAPYKMARSELKELKV 240

Query: 456 QLQKLVDKGYIRHNVLRRRAPHFISFLHHFPSKLSEYFEERVKEEEEEEFRGLRLKKIGK 515
           QLQKLVDKGYIRHNVLRRRA                                        
Sbjct: 241 QLQKLVDKGYIRHNVLRRRA---------------------------------------- 300

Query: 516 SSCNCQPLVVLFGLSYLEGTKRPRGNRPSLQTGKLDKTVIFPLLTLSVLRDNDAVVSDGR 575
                       G    E    PRGNRPSLQTGKLDKTVIFPLLTLSVLRDNDAV     
Sbjct: 301 -----------VGCRVFEDEDLPRGNRPSLQTGKLDKTVIFPLLTLSVLRDNDAV----- 343

Query: 576 APLRQRRWECRVEIELLVSDTLPMSAESFESNSSTWLELYFESVHVEMFC 608
                      VEIELLVSDTLPMSAESFESNSSTWLELYFESVHVEMFC
Sbjct: 361 -----------VEIELLVSDTLPMSAESFESNSSTWLELYFESVHVEMFC 343

[Close]

BLAST of IVF0026124 vs. ExPASy TrEMBL
Match: A0A5A7T7I6 (RNA-directed DNA polymerase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2967G00020 PE=4 SV=1)

HSP 1 Score: 530.4 bits (1365), Expect = 9.8e-147
Identity = 310/482 (64.32%), Postives = 312/482 (64.73%), Query Frame = 0


Query: 216 MPPRTSRRLRQNQAEMKGPTEGQSIGKFSTPRVQVGARNKRFTRTTKKIGRPKRAEPSNP 275
           MPPRTSRRLRQNQAEMKGPTEGQSIGKFSTPRVQVGARNKRFTRTTKKIGRPKRAEPSNP
Sbjct: 1   MPPRTSRRLRQNQAEMKGPTEGQSIGKFSTPRVQVGARNKRFTRTTKKIGRPKRAEPSNP 60

Query: 276 EKACGIKQLRKLGATVFEGSTNPTDVKEWLNMLEKCFDV--------------------- 335
           EKACGIKQLRKLGATVFEGSTNPTDVKEWLNMLEKC D                      
Sbjct: 61  EKACGIKQLRKLGATVFEGSTNPTDVKEWLNMLEKCSDFRGHEQQWFTPGVNISSRKEFK 120

Query: 336 ----------MNYFEE-------------------------------------------- 395
                     MNY +                                             
Sbjct: 121 KRSRGQALRNMNYGQPHARVIVGIIEVSVLWMLVCVTNVNSKNISRKIACSITQQFRGIR 180

Query: 396 ---------------RKRAPAMQSTREFLDDLGNRKVLRYDSIRSFSARYRYASGFATTR 455
                          R+RAPAMQSTREFLDDLGNRKVLRYDSIRSFSARYRYASGFATTR
Sbjct: 181 ELCPRKLSNQEFQWFRQRAPAMQSTREFLDDLGNRKVLRYDSIRSFSARYRYASGFATTR 240

Query: 456 VIDARLVEVQREKRKPEDVPMVKEFLDVLPNDLTNLPPNREIEFTVKLLSGTAPTSQAPY 515
           VIDARLVEVQREKRKPEDVPMVKEFLDVLPNDLTNLPPNREIEFTVKLLSGTAPTSQAPY
Sbjct: 241 VIDARLVEVQREKRKPEDVPMVKEFLDVLPNDLTNLPPNREIEFTVKLLSGTAPTSQAPY 300

Query: 516 KMARSELKELKVQLQKLVDKGYIRHNVLRRRAPHFISFLHHFPSKLSEYFEERVKEEEEE 575
           KMARSELKELKVQLQKLVDKGYIRHNVLRRRA                            
Sbjct: 301 KMARSELKELKVQLQKLVDKGYIRHNVLRRRA---------------------------- 360

Query: 576 EFRGLRLKKIGKSSCNCQPLVVLFGLSYLEGTKRPRGNRPSLQTGKLDKTVIFPLLTLSV 608
                                   G    E    PRGNRPSLQTGKLDKTVIFPLLTLSV
Sbjct: 361 -----------------------VGCRVFEDEDLPRGNRPSLQTGKLDKTVIFPLLTLSV 415

[Close]

BLAST of IVF0026124 vs. ExPASy TrEMBL
Match: A0A5A7TY60 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold230G00820 PE=3 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 2.6e-83
Identity = 181/337 (53.71%), Postives = 196/337 (58.16%), Query Frame = 0


Query: 1   MVHLAVHLIREIEFCGPDHLRWMYPFERYIKVLKAYARNRNRPEECMVENYIVEEVIKFR 60
           MVHL VHL+REIEFCGP HLRWMYPFERY+KVLK Y RNRNRPE CMVENYIVEE I+F 
Sbjct: 211 MVHLVVHLVREIEFCGPVHLRWMYPFERYMKVLKTYVRNRNRPEGCMVENYIVEEAIEFC 270

Query: 61  YEFIVGVSSIGLNSSIITRDSNVDRTLSASSFIRLSKEQLDQAHLYVIQN---------- 120
            EFI GVSSIGLNSS+I ++SN+D+ LSASSFIR SKEQLDQAHLYVIQN          
Sbjct: 271 SEFIAGVSSIGLNSSVIKKNSNMDKALSASSFIRPSKEQLDQAHLYVIQNVNDVLPYVEQ 330

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 331 HMESLRKLNSGKARSKKWIQEEHNRSFSRWLSTRVALALEVPKNSITPSLRWIAHGPSPD 390

Query: 181 --------------------------EIWEIDYHQLLFILFKCDWVDNRSGVKMDKLGFT 214
                                     EIWEIDYHQL FILFKCDWVDNRSGVK+D+LGFT
Sbjct: 391 VATYSVSSSKDKNPIMSDMTFYGVIREIWEIDYHQLSFILFKCDWVDNRSGVKVDELGFT 450

[Close]

BLAST of IVF0026124 vs. ExPASy TrEMBL
Match: A0A5D3C2U9 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold398G00070 PE=3 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 7.9e-80
Identity = 182/370 (49.19%), Postives = 196/370 (52.97%), Query Frame = 0


Query: 1   MVHLAVHLIREIEFCGPDHLRWMYPFERYIKVLKAYARNRNRPEECMVENYIVEEVIKFR 60
           MVHL VHL+REIEFCGP HLRWMYPFERY+KVLK Y RNRNRPE CMVENYIVEE I+F 
Sbjct: 515 MVHLVVHLVREIEFCGPVHLRWMYPFERYMKVLKTYVRNRNRPEGCMVENYIVEEAIEFC 574

Query: 61  YEFIVGVSSIGLNSSIITRDSNVDRTLSASSFIRLSKEQLDQAHLYVIQN---------- 120
            EFI GVSSIGLNSS+I ++SN+DR LSASSFIR SKEQLDQAHLYVIQN          
Sbjct: 575 SEFIAGVSSIGLNSSVIKKNSNMDRALSASSFIRPSKEQLDQAHLYVIQNVNDVLPYVEQ 634

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 635 HMESLRKLNSGKARSKKWIQEEHNRSFSRWLSTRVALALEVPKNSITPSLRWIAHGPSPD 694

Query: 181 -----------------------------------------------------------E 214
                                                                      E
Sbjct: 695 VATYSGYIINGYYYHTKRRDDIRRVQNSGVSITATTMQVSSSKDKNPVMSDMTFYGVIRE 754

[Close]

BLAST of IVF0026124 vs. ExPASy TrEMBL
Match: A0A5A7VGQ2 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold25G00330 PE=3 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 7.9e-80
Identity = 182/370 (49.19%), Postives = 196/370 (52.97%), Query Frame = 0


Query: 1   MVHLAVHLIREIEFCGPDHLRWMYPFERYIKVLKAYARNRNRPEECMVENYIVEEVIKFR 60
           MVHL VHL+REIEFCGP HLRWMYPFERY+KVLK Y RNRNRPE CMVENYIVEE I+F 
Sbjct: 515 MVHLVVHLVREIEFCGPVHLRWMYPFERYMKVLKTYVRNRNRPEGCMVENYIVEEAIEFC 574

Query: 61  YEFIVGVSSIGLNSSIITRDSNVDRTLSASSFIRLSKEQLDQAHLYVIQN---------- 120
            EFI GVSSIGLNSS+I ++SN+DR LSASSFIR SKEQLDQAHLYVIQN          
Sbjct: 575 SEFIAGVSSIGLNSSVIKKNSNMDRALSASSFIRPSKEQLDQAHLYVIQNVNDVLPYVEQ 634

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 635 HMESLRKLNSGKARSKKWIQEEHNRSFSRWLSTRVALALEVPKNSITPSLRWIAHGPSPD 694

Query: 181 -----------------------------------------------------------E 214
                                                                      E
Sbjct: 695 VATYSGYIINGYYYHTKRRDDIRRVQNSGVSITATTMQVSSSKDKNPVMSDMTFYGVIRE 754

[Close]

BLAST of IVF0026124 vs. NCBI nr
Match: TYJ98714.1 (RNA-directed DNA polymerase-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 538 bits (1386), Expect = 6.87e-184
Identity = 301/410 (73.41%), Postives = 304/410 (74.15%), Query Frame = 0


Query: 216 MPPRTSRRLRQNQAEMKGPTEGQSIGKFSTPRVQVGARNKRFTRTTKKIGRPKRAEPSNP 275
           MPPRTSRRLRQNQAEMKGPTEGQSIGKFSTPRVQVGARNKRFTRTTKKIGRPKRAEPSNP
Sbjct: 1   MPPRTSRRLRQNQAEMKGPTEGQSIGKFSTPRVQVGARNKRFTRTTKKIGRPKRAEPSNP 60

Query: 276 EKACGIKQLRKLGATVFEGSTNPTDVKEWLNMLEK-CFDVMNYFEE-------------- 335
           EKACGIKQLRKLGATVFEGSTNPTDVKE  N+  K    +   F                
Sbjct: 61  EKACGIKQLRKLGATVFEGSTNPTDVKECKNISRKIACSITQQFRGIRELCPRKLSNQEF 120

Query: 336 ---RKRAPAMQSTREFLDDLGNRKVLRYDSIRSFSARYRYASGFATTRVIDARLVEVQRE 395
              R+RAPAMQSTREFLDDLGNRKVLRYDSIRSFSARYRYASGFATTRVIDARLVEVQRE
Sbjct: 121 QWFRQRAPAMQSTREFLDDLGNRKVLRYDSIRSFSARYRYASGFATTRVIDARLVEVQRE 180

Query: 396 KRKPEDVPMVKEFLDVLPNDLTNLPPNREIEFTVKLLSGTAPTSQAPYKMARSELKELKV 455
           KRKPEDVPMVKEFLDVLPNDLTNLPPNREIEFTVKLLSGTAPTSQAPYKMARSELKELKV
Sbjct: 181 KRKPEDVPMVKEFLDVLPNDLTNLPPNREIEFTVKLLSGTAPTSQAPYKMARSELKELKV 240

Query: 456 QLQKLVDKGYIRHNVLRRRAPHFISFLHHFPSKLSEYFEERVKEEEEEEFRGLRLKKIGK 515
           QLQKLVDKGYIRHNVLRRRA                                        
Sbjct: 241 QLQKLVDKGYIRHNVLRRRA---------------------------------------- 300

Query: 516 SSCNCQPLVVLFGLSYLEGTKRPRGNRPSLQTGKLDKTVIFPLLTLSVLRDNDAVVSDGR 575
                       G    E    PRGNRPSLQTGKLDKTVIFPLLTLSVLRDNDAVV    
Sbjct: 301 -----------VGCRVFEDEDLPRGNRPSLQTGKLDKTVIFPLLTLSVLRDNDAVV---- 343

Query: 576 APLRQRRWECRVEIELLVSDTLPMSAESFESNSSTWLELYFESVHVEMFC 607
                       EIELLVSDTLPMSAESFESNSSTWLELYFESVHVEMFC
Sbjct: 361 ------------EIELLVSDTLPMSAESFESNSSTWLELYFESVHVEMFC 343

[Close]

BLAST of IVF0026124 vs. NCBI nr
Match: KAA0038923.1 (RNA-directed DNA polymerase-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 533 bits (1373), Expect = 7.53e-181
Identity = 310/482 (64.32%), Postives = 312/482 (64.73%), Query Frame = 0


Query: 216 MPPRTSRRLRQNQAEMKGPTEGQSIGKFSTPRVQVGARNKRFTRTTKKIGRPKRAEPSNP 275
           MPPRTSRRLRQNQAEMKGPTEGQSIGKFSTPRVQVGARNKRFTRTTKKIGRPKRAEPSNP
Sbjct: 1   MPPRTSRRLRQNQAEMKGPTEGQSIGKFSTPRVQVGARNKRFTRTTKKIGRPKRAEPSNP 60

Query: 276 EKACGIKQLRKLGATVFEGSTNPTDVKEWLNMLEKCFDV--------------------- 335
           EKACGIKQLRKLGATVFEGSTNPTDVKEWLNMLEKC D                      
Sbjct: 61  EKACGIKQLRKLGATVFEGSTNPTDVKEWLNMLEKCSDFRGHEQQWFTPGVNISSRKEFK 120

Query: 336 ----------MNYFEE-------------------------------------------- 395
                     MNY +                                             
Sbjct: 121 KRSRGQALRNMNYGQPHARVIVGIIEVSVLWMLVCVTNVNSKNISRKIACSITQQFRGIR 180

Query: 396 ---------------RKRAPAMQSTREFLDDLGNRKVLRYDSIRSFSARYRYASGFATTR 455
                          R+RAPAMQSTREFLDDLGNRKVLRYDSIRSFSARYRYASGFATTR
Sbjct: 181 ELCPRKLSNQEFQWFRQRAPAMQSTREFLDDLGNRKVLRYDSIRSFSARYRYASGFATTR 240

Query: 456 VIDARLVEVQREKRKPEDVPMVKEFLDVLPNDLTNLPPNREIEFTVKLLSGTAPTSQAPY 515
           VIDARLVEVQREKRKPEDVPMVKEFLDVLPNDLTNLPPNREIEFTVKLLSGTAPTSQAPY
Sbjct: 241 VIDARLVEVQREKRKPEDVPMVKEFLDVLPNDLTNLPPNREIEFTVKLLSGTAPTSQAPY 300

Query: 516 KMARSELKELKVQLQKLVDKGYIRHNVLRRRAPHFISFLHHFPSKLSEYFEERVKEEEEE 575
           KMARSELKELKVQLQKLVDKGYIRHNVLRRRA                            
Sbjct: 301 KMARSELKELKVQLQKLVDKGYIRHNVLRRRA---------------------------- 360

Query: 576 EFRGLRLKKIGKSSCNCQPLVVLFGLSYLEGTKRPRGNRPSLQTGKLDKTVIFPLLTLSV 607
                                   G    E    PRGNRPSLQTGKLDKTVIFPLLTLSV
Sbjct: 361 -----------------------VGCRVFEDEDLPRGNRPSLQTGKLDKTVIFPLLTLSV 415

[Close]

BLAST of IVF0026124 vs. NCBI nr
Match: KAA0046916.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 323 bits (828), Expect = 1.16e-93
Identity = 181/337 (53.71%), Postives = 196/337 (58.16%), Query Frame = 0


Query: 1   MVHLAVHLIREIEFCGPDHLRWMYPFERYIKVLKAYARNRNRPEECMVENYIVEEVIKFR 60
           MVHL VHL+REIEFCGP HLRWMYPFERY+KVLK Y RNRNRPE CMVENYIVEE I+F 
Sbjct: 211 MVHLVVHLVREIEFCGPVHLRWMYPFERYMKVLKTYVRNRNRPEGCMVENYIVEEAIEFC 270

Query: 61  YEFIVGVSSIGLNSSIITRDSNVDRTLSASSFIRLSKEQLDQAHLYVIQN---------- 120
            EFI GVSSIGLNSS+I ++SN+D+ LSASSFIR SKEQLDQAHLYVIQN          
Sbjct: 271 SEFIAGVSSIGLNSSVIKKNSNMDKALSASSFIRPSKEQLDQAHLYVIQNVNDVLPYVEQ 330

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 331 HMESLRKLNSGKARSKKWIQEEHNRSFSRWLSTRVALALEVPKNSITPSLRWIAHGPSPD 390

Query: 181 --------------------------EIWEIDYHQLLFILFKCDWVDNRSGVKMDKLGFT 213
                                     EIWEIDYHQL FILFKCDWVDNRSGVK+D+LGFT
Sbjct: 391 VATYSVSSSKDKNPIMSDMTFYGVIREIWEIDYHQLSFILFKCDWVDNRSGVKVDELGFT 450

[Close]

BLAST of IVF0026124 vs. NCBI nr
Match: KAA0067831.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 306 bits (785), Expect = 1.20e-92
Identity = 179/373 (47.99%), Postives = 197/373 (52.82%), Query Frame = 0


Query: 1   MVHLAVHLIREIEFCGPDHLRWMYPFERYIKVLKAYARNRNRPEECMVENYIVEEVIKFR 60
           MVHL VHL+REIEFCGP HL WMYPFERY+KVLK Y RNR+RPE CMVENYIVEE I+F 
Sbjct: 173 MVHLVVHLVREIEFCGPVHLMWMYPFERYMKVLKTYVRNRHRPEGCMVENYIVEEAIEFC 232

Query: 61  YEFIVGVSSIGLNSSIITRDSNVDRTLSASSFIRLSKEQLDQAHLYVIQN---------- 120
            EFI GV+SIGLNSS+I ++SNV+R +SASSFIR SKEQLDQAHLYVIQN          
Sbjct: 233 SEFIAGVNSIGLNSSVIKKNSNVNRAISASSFIRPSKEQLDQAHLYVIQNVNDVLPYVEQ 292

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 293 HMESLRKLNSGKARSKKWIQEEHNRSFSRWLSTRVALALEVPKNSITPSLRWIAHGPSPD 352

Query: 181 -----------------------------------------------------------E 216
                                                                      E
Sbjct: 353 VATYSGYIINGYYYHTKRRDDIRGVQNSGVSITATTMQVSSSKDKNPVMSDMTFYGVIRE 412

[Close]

BLAST of IVF0026124 vs. NCBI nr
Match: KAA0064110.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 311 bits (798), Expect = 5.68e-89
Identity = 182/370 (49.19%), Postives = 196/370 (52.97%), Query Frame = 0


Query: 1   MVHLAVHLIREIEFCGPDHLRWMYPFERYIKVLKAYARNRNRPEECMVENYIVEEVIKFR 60
           MVHL VHL+REIEFCGP HLRWMYPFERY+KVLK Y RNRNRPE CMVENYIVEE I+F 
Sbjct: 220 MVHLVVHLVREIEFCGPVHLRWMYPFERYMKVLKTYVRNRNRPEGCMVENYIVEEAIEFC 279

Query: 61  YEFIVGVSSIGLNSSIITRDSNVDRTLSASSFIRLSKEQLDQAHLYVIQN---------- 120
            EFI GVSSIGLNSS+I ++SN+DR LSASSFIR SKEQLDQAHLYVIQN          
Sbjct: 280 SEFIAGVSSIGLNSSVIKKNSNMDRALSASSFIRPSKEQLDQAHLYVIQNVNDVLPYVEQ 339

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 340 HMESLRKLNSGKARSKKWIQEEHNRSFSRWLSTRVALALEVPKNSITPSLRWIAHGPSPD 399

Query: 181 -----------------------------------------------------------E 213
                                                                      E
Sbjct: 400 VATYSGYIINGYYYHTKRRDDIRRVQNSGVSITATTMQVSSSKDKNPVMSDMTFYGVIRE 459

The following BLAST results are available for this feature:

BLAST of IVF0026124 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0026124 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BI39	3.1e-148	73.41	RNA-directed DNA polymerase-like protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7T7I6	9.8e-147	64.32	RNA-directed DNA polymerase-like protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7TY60	2.6e-83	53.71	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold230G00820 PE...	[more]
A0A5D3C2U9	7.9e-80	49.19	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold398G00070 PE...	[more]
A0A5A7VGQ2	7.9e-80	49.19	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold25G00330 PE=...	[more]

BLAST of IVF0026124 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ98714.1	6.87e-184	73.41	RNA-directed DNA polymerase-like protein [Cucumis melo var. makuwa]	[more]
KAA0038923.1	7.53e-181	64.32	RNA-directed DNA polymerase-like protein [Cucumis melo var. makuwa]	[more]
KAA0046916.1	1.16e-93	53.71	transposase [Cucumis melo var. makuwa]	[more]
KAA0067831.1	1.20e-92	47.99	transposase [Cucumis melo var. makuwa]	[more]
KAA0064110.1	5.68e-89	49.19	transposase [Cucumis melo var. makuwa]	[more]

BLAST of IVF0026124 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 425..445
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 398..462 e-value: 5.4E-6 score: 28.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 219..244
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 221..244
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 382..453
None	No IPR available	PANTHER	PTHR24559:SF330	RNA-DIRECTED DNA POLYMERASE HOMOLOG	coord: 382..453
IPR025452	Domain of unknown function DUF4218	PFAM	PF13960	DUF4218	coord: 1..69 e-value: 2.9E-20 score: 72.1
IPR025312	Domain of unknown function DUF4216	PFAM	PF13952	DUF4216	coord: 113..178 e-value: 1.0E-16 score: 61.0
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 386..452

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0026124.2	IVF0026124.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043170	macromolecule metabolic process
biological_process	GO:0006807	nitrogen compound metabolic process
biological_process	GO:0044238	primary metabolic process
molecular_function	GO:0003824	catalytic activity